Index of Molecular Images

To facilitate comparison of similar structures, the images are listed by clan and family.

Clan MEROPS ID Peptidase Comment PDB Entry
AA A01.001 pepsin A pepsin 3A; complex with pepstatin 1PSO
AA A01.001 pepsin A precursor 3PSG
AA A01.003 gastricsin activation intermediate 2 1AVF
AA A01.004 memapsin-2 protease domain; complex with Glu-Val-Asn-leucinol-2-methyl-propionyl-Ala-Glu-Phe inhibitor 1FKN_A
AA A01.006 chymosin 4CMS
AA A01.007 renin recombinant 2REN
AA A01.008 renin-2 complex with inhibitor CH-66 1SMR_A
AA A01.009 cathepsin D complex with pepstatin 1LYB
AA A01.010 cathepsin E activation intermediate 1TZS
AA A01.011 penicillopepsin complex with ethyl cyclo[(2S)-2-[[(1R)-1-(N-(l-N-(3-methylbutanoyl)valyl-L-aspartyl)amino)-3-methylbutyl]hydroxyphosphinyloxy]-3-(3-aminomethyl)phenylpropanoate 1BXO
AA A01.012 rhizopuspepsin complex with pepstatin 6APR
AA A01.013 mucorpepsin 1MPP
AA A01.014 candidapepsin SAP1 2QZW
AA A01.016 aspergillopepsin I 1IZD
AA A01.016 aspergillopepsin I 1IBQ_A
AA A01.017 endothiapepsin complex with pepstatin 4ER2
AA A01.018 saccharopepsin complex with N-carbonylmorpholine-Phe-norLeu-cyclohexylfluorostatone-methylamine 2JXR
AA A01.019 polyporopepsin 1WKR
AA A01.020 phytepsin 1B5F_A
AA A01.021 plasmepsin (Plasmodium sp.) complex with pepstatin A inhibitor 1QS8
AA A01.022 plasmepsin-1 theoretical model 1LCR
AA A01.022 plasmepsin-1 complex with KNI-10006 inhibitor 3QS1
AA A01.023 plasmepsin-2 complex with pepstatin A 1SME
AA A01.027 trichodermapepsin complex with pepstatin A 3C9Y
AA A01.030 yapsin-1 theoretical model 1YPS
AA A01.037 canditropsin Complex with Thr-Ile-Thr-Ser 1J71
AA A01.038 candiparapsin complex with pepstatin 3FV3
AA A01.041 memapsin-1 complex with hydroxyethylenamine transition-state inhibitor N-(1S,2R)-1-benzyl-2-hydroxy-3-[(3-methylbenzyl)amino]propyldibenzo[B,F]oxepine-10-carboxamide 2EWY_A
AA A01.055 Mername-AA047 peptidase 1AM5
AA A01.059 plasmepsin-4 complex with pepstatin A 1LS5_A
AA A01.060 candidapepsin SAP2 complex with A70450 1EAG_A
AA A01.061 candidapepsin SAP3 complex with pepstatin A 2H6T_A
AA A01.063 candidapepsin SAP5 complex with pepstatin A 2QZX
AA A01.070 pepsin A4 pepsin 3A; complex with pepstatin 1PSO
AA A01.UPA subfamily A1A unassigned peptidases 1IZD
AA A02.001 HIV-1 retropepsin complex with acetyl-pepstatin 5HVP
AA A02.002 HIV-2 retropepsin complex with U097410 4UPJ
AA A02.004 equine infectious anaemia virus retropepsin complex with inhibitor HBY-793 1FMB
AA A02.007 feline immunodeficiency virus retropepsin complex with Ac-naphthylAla-Val-Leu-Ala-Glu-naphthylaminoAla substrate 3FIV
AA A02.008 murine leukemia virus-type retropepsin peptidase domain only; complex with amprenavir 3SM2
AA A02.012 retropepsin (human T-cell leukemia virus) 2B7F
AA A02.015 Rous sarcoma virus retropepsin 2RSP_B
AA A02.UPW family A2 unassigned peptidases 1MVP
AA A09.001 spumapepsin NMR structure 2JYS
AD A24.016 FlaK peptidase 3S0X
AE A25.001 gpr peptidase precursor 1C8B_A
AF A26.001 omptin 1I78
AF A26.003 plasminogen activator Pla 2X55
AA A28.001 DNA-damage inducible protein 1 2I1A
AE A31.001 HybD peptidase 1CFZ_A
CA C01.001 papain complex with E64C 1PE6
CA C01.002 chymopapain 1YAL
CA C01.003 caricain Asp185Glu mutant; complex with E64 1MEG
CA C01.004 glycyl endopeptidase complex with benzyloxycarbonyl-Leu-Val-Gly-methylene bound to Cys25 1GEC
CA C01.007 actinidin complex with E64 1AEC
CA C01.009 cathepsin V complex with 4-methylpiperazin-1-ylcarbonyl-Phe-3-amino-5-phenylpentane inhibitor 1FH0
CA C01.010 vignain complex with D-Val-Leu-dexoxy-methyl-Lys. 1S4V_A
CA C01.013 cathepsin X precursor 1DEU
CA C01.017 zingipain tetramer 1CQD
CA C01.018 cathepsin F 1M6D_A
CA C01.024 endopeptidase-B (Hordeum-type) isoform 2 (EP-B2); complex with leupeptin 2FO5_A
CA C01.032 cathepsin L precursor 1CJL
CA C01.033 cathepsin L1 (Fasciola sp.) precursor 2O6X
CA C01.034 cathepsin S Cys25Ser mutant 1GLO
CA C01.036 cathepsin K complex with E64 1ATK
CA C01.040 cathepsin H 8PCH
CA C01.046 falcipain-2 complex with egg-white cystatin 1YVB_A
CA C01.060 cathepsin B 1CSB
CA C01.060 cathepsin B precursor 1MIR
CA C01.062 cathepsin B-like peptidase (platyhelminth) theoretical model 1MF3
CA C01.063 falcipain-3 complex with leupeptin 3BPM_A
CA C01.068 vitellogenic cathepsin B theoretical model 1MHG
CA C01.070 dipeptidyl-peptidase I exclusion domain 1K3B_A
CA C01.072 rhodesain complex with the vinyl sulfone derived inhibitor K11777 2P7U_A
CA C01.073 peptidase 1 (mite) precursor; mutant form 1XKG
CA C01.074 CPB peptidase theoretical model 1BMJ
CA C01.075 cruzipain catalytic domain; complex with Bz-Arg-Ala-fluoromethylketone 2AIM
CA C01.084 bleomycin hydrolase (animal) Cys73Ser mutant 2CB5
CA C01.085 bleomycin hydrolase (yeast) 1GCB
CA C01.099 ervatamin B 1IWD
CA C01.101 cathepsin B-like peptidase, nematode theoretical model 1MNW
CA C01.116 ervatamin C 1O0E_A
CA C01.134 mexicain 2BDZ
CA C01.137 ervatamin A complex with E64 3BCN
CA C01.149 TgCPL peptidase (Toxoplasma-type) complex with propeptide 3F75_A
CA C02.001 calpain-1 catalytic domain only 2ARY
CA C02.002 calpain-2 Complex with light chain 1DF0_A
CA C02.006 calpain-9 catalytic domain only 1ZIV
PA C03.001 poliovirus-type picornain 3C 1L1N_A
PA C03.005 hepatitis A virus-type picornain 3C 1HAV_A
PA C03.007 human rhinovirus 2-type picornain 3C complex with AG7088 inhibitor 1CQQ_A
PA C03.008 foot-and-mouth disease virus picornain 3C type A10(61); crystal packing mutant (Lys51Gln) 2J92_A
PA C03.011 Coxsackievirus-type picornain 3C 2ZU3_A
PA C03.021 rhinovirus picornain 2A 2HRV_A
PA C04.004 tobacco etch virus NIa peptidase complex with product 1LVM
CE C05.001 adenain complex with peptide cofactor 1AVP_A
CA C06.001 potato virus Y-type helper component peptidase 3RNV
CN C09.002 equine encephalitis alphavirus nsP2 peptidase 2HWK
CA C10.001 streptopain precursor; Cys47Ser mutant 1DKI_A
CA C10.004 interpain A structure of active wild-type prevotella intermedia interpain a cysteine protease 3BBA_A
CA C12.001 ubiquitinyl hydrolase-L1 2ETL
CA C12.002 ubiquitinyl hydrolase-YUH1 complex with human ubiquitin 1CMX
CA C12.003 ubiquitinyl hydrolase-L3 1UCH
CD C13.004 legumain, animal-type complex with Ac-Tyr-Val-Ala-Asp-chloromethylketone 4AW9
CD C14.003 caspase-3 complex with tetrapeptide inhibitor acetyl-Asp-Val-Ala-Asp-fluoromethylketone 1CP3
CD C14.004 caspase-7 complex with acetyl-Asp-Glu-Val-Asp-CHO 1F1J
CD C14.006 caspase-2 complex with acetyl-Leu-Asp-Glu-Ser-Asp-CHO 1PYO_A
CD C14.009 caspase-8 complex with tripeptide ketone inhibitor Z-Glu-Val-Asp-dichloromethylketone 1QDU
CD C14.010 caspase-9 complex with BIR-4 protein 1NW9_B
CD C14.015 caspase (insect 1) 1M72
CD C14.019 caspase DRONC (Drosophila melanogaster)-type peptidase Cys284Arg, Cys318Ala double mutant 2FP3
CD C14.026 paracaspase complex with Val-Arg-Pro-Arg inhibitor 3UOA
CD C14.048 bacterial metacaspase 3BIJ_A
CD C14.UPA subfamily C14A unassigned peptidases complex with inhibitor Ac-Tyr-Val-Ala-Asp-H 1ICE
CF C15.001 pyroglutamyl-peptidase I (prokaryote) 1A2Z_A
CA C16.009 severe acute respiratory syndrome coronavirus papain-like peptidase 2FE8
CM C18.001 hepatitis C virus peptidase 2 catalytic domain of the NS2 protein only 2HD0
CA C19.011 ubiquitin-specific peptidase 8 catalytic domain only 2GFO
CA C19.013 ubiquitin-specific peptidase 2 complex with ubiquitin 2IBI
CA C19.015 ubiquitin-specific peptidase 14 2AYN
CA C19.016 ubiquitin-specific peptidase 7 complex with ubiquitin aldehyde 1NBF
CA C19.079 ubiquitin-specific peptidase 6 (Saccharomyces-type) 1VJV
CA C19.087 ubiquitin-specific peptidase 8 (Saccharomyces cerevisiae)-like peptidase complex with SUS1, SAGA-associated factors 11 and 73 bound to ubiquitin aldehyde. 3MHS
CD C25.003 gingipain RgpB Complex with D-Phe-Phe-Arg-chloromethylketone inhibitor 1CVR_A
PC C26.001 gamma-glutamyl hydrolase tetramer 1L9X_A
CA C28.001 foot-and-mouth disease virus L-peptidase Cys51Ala, Cys133Ser and Met126Val engineered mutant. 1QMY_A
PA C30.002 avian infectious bronchitis coronavirus 3C-like peptidase complex with Michael acceptor inhibitor N3 2Q6F
PA C30.003 human coronavirus 229E main peptidase 1P9S_A
PA C30.004 porcine transmissible gastroenteritis virus-type main peptidase 1LVO_A
PA C30.005 SARS coronavirus picornain 3C-like peptidase 1UJ1_A
CA C31.UPW family C31 unassigned peptidases 3IFU
CA C32.001 equine arteritis virus-type cysteine peptidase 3MTV
PA C37.001 calicivirin 1WQS_A
CA C39.001 bacteriocin-processing peptidase peptidase domain only 3K8U
CO C40.009 NLP/P60 (Nostoc punctiforme)-like putative peptidase TOPSAN 2EVR
CO C40.UPW family C40 unassigned peptidases 3H41_A
PB C44.001 amidophosphoribosyltransferase precursor 1GPH
PB C44.971 glucosamine-fructose-6-phosphate aminotransferase complex with glutamate 1GDO_A
PB C45.001 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase precursor precursor 2X1C
PD C46.001 hedgehog protein autoprocessing domain 1AT0
PD C46.002 Sonic hedgehog protein amino-terminal domain complexed with zinc 1VHH
CA C47.001 staphopain A complex with E64 1CV8
CA C47.002 staphopain B precursor 1X9Y
CE C48.001 Ulp1 peptidase peptidase unit; complex with ubiquitin-like protein SMT3 1EUV_A
CE C48.002 SENP1 peptidase complex with sumo2 2CKG
CE C48.007 SENP2 peptidase Complex with sumo-1 1TGZ_A
CE C48.009 SENP7 peptidase catalytic domain only 3EAY
CE C48.UPW family C48 unassigned peptidases complex with ubiquitin-Like Protein Nedd8 1XT9
CA C54.002 autophagin-2 cysteine protease atg4a 2P82_A
CA C54.003 autophagin-1 2CY7
PC C56.001 PfpI peptidase 1G2I_A
PC C56.004 YDR533C putative peptidase 1RW7_A
CA C58.002 AvrPphB peptidase 1UKF_A
PB C59.001 penicillin V acylase precursor 2PVA_A
PB C59.951 choloylglycine hydrolase 2BJF_A
CL C60.001 sortase A (Staphylococcus-type) 1T2P_A
CL C60.002 sortase B 1NG5_A
CL C60.006 sortase A (Streptococcus-type) 3FN5_A
CL C60.007 sortase C1 (Streptococcus sp.) 2W1J_A
CA C64.003 A20 peptidase OTU domain only 2VFJ
CA C65.001 otubain-1 2ZFY
CA C65.002 otubain-2 1TFF
CA C66.001 IdeS peptidase 1Y08
CA C78.001 UfSP1 peptidase 2Z84
CD C80.001 RTX self-cleaving toxin peptidase domain only 3EEB
CD C80.003 self-cleaving toxin B (Clostridium-type) 3PEE
CL C82.001 L,D-transpeptidase (Enterococcus-type) 1ZAT
CA C83.001 gamma-glutamylcysteine dipeptidyltranspeptidase complex with glutathione 2BU3
CA C85.001 OTLD1 deubiquitinylating enzyme catalytic domain only; complex with ubiquitin aldehyde 3TMP
CA C85.006 OTU1 peptidase (Saccharomyces cerevisiae-type) complex with ubiquitin 3C0R
CA C87.001 nairovirus deubiquitinylating peptidase complex with ubiquitin 3PT2_A
CA C93.UPW family C93 unassigned peptidases calcium-bound form 4FGO
CP C97.001 DeSI-1 peptidase 2WP7
GA G01.001 scytalidoglutamic peptidase 1S2B
GA G01.002 aspergilloglutamic peptidase 1Y43_A
GB G02.001 pre-neck appendage protein (Bacillus phage phi29) 3GQN
MA M01.004 leukotriene A4 hydrolase complex with bestatin 1HS6_A
MA M01.005 alanyl aminopeptidase (bacterial-type) 2DQ6_A
MA M01.018 endoplasmic reticulum aminopeptidase 1 complex with bestatin 3MDJ
MA M01.021 tricorn interacting factor F3 1Z1W
MA M01.024 ERAP2 aminopeptidase 3SE6
MA M01.029 M1 aminopeptidase (Plasmodium spp.) complex with bestatin 3EBH_A
MA M01.031 cold-active aminopeptidase (Colwellia psychrerythraea)-type peptidase crystal structure of cold-aminopeptidase from colwellia psychrerythraea ***caveat 3cia incorrect chirality at five calpha leu 3CIA_A
MA M01.034 leukotriene A4 hydrolase (Saccharomyces cerevisiae) complex with bestatin 2XQ0
MA M02.001 angiotensin-converting enzyme peptidase unit 1 1O8A
MA M02.001 angiotensin-converting enzyme peptidase unit 1 N-terminal catalytic domain only 2C6F_A
MA M02.003 peptidyl-dipeptidase Ance 1J36_A
MA M02.004 angiotensin-converting enzyme peptidase unit 2 1O8A
MA M02.006 angiotensin-converting enzyme-2 structure of sars coronavirus spike receptor-binding domain complexed with its receptor 2AJF_A
MA M03.001 thimet oligopeptidase 1S4B
MA M03.002 neurolysin 1I1I_P
MA M03.007 oligopeptidase F TOPSAN 3CE2
MA M03.010 Pz-peptidase A 2H1N
MA M04.001 thermolysin complex with phosphoramidon 1TLP
MA M04.001 thermolysin 1NPC
MA M04.005 pseudolysin 1EZM
MA M04.009 aureolysin 1BQB
MA M04.025 protealysin precursor of protealysin, metalloproteinase from serratia proteamaculans. 2VQX_A
MA M07.001 snapalysin 1KUH
MA M08.001 leishmanolysin 1LML
MA M09.002 bacterial collagenase G/A complex with isoamylphosphonyl-Gly-Pro-Ala 2Y6I
MA M10.001 matrix metallopeptidase-1 catalytic domain; complex with [[1-[N-hydroxy-acetamidyl]-3-methyl-butyl]-carbonyl-leucinyl]-alanine ethyl ester 2TCL
MA M10.001 matrix metallopeptidase-1 1FBL
MA M10.002 matrix metallopeptidase-8 complex with 3-formyl-2-hydroxy-5-methyl-hexanoic acid hydroxyamide 1KBC
MA M10.003 matrix metallopeptidase-2 1CK7_A
MA M10.004 matrix metallopeptidase-9 1L6J
MA M10.005 matrix metallopeptidase-3 catalytic domain; complex with carboxylic acid based inhibitor (1N)-4-N-butoxyphenylsulfonyl-(2R)-N-hydroxycarboxamido-(4S)-methanesulfonylamino-pyrrolidine 1G49
MA M10.006 matrix metallopeptidase-10 (Homo sapiens-type) homotrimer; catalytic domain only 1Q3A
MA M10.007 matrix metallopeptidase-11 catalytic domain; complex with phosphinic inhibitor R-2-[4’-methoxy-(1,1’-biphenyl)-4-yl]-sulfonyl-amino-6-methoxy-hex-4-ynoic acid 1HV5
MA M10.008 matrix metallopeptidase-7 complex with N4-hydroxy-2-isobutyl-N1-(9-oxo-1,8-diaza-tricyclo[,18]nonadeca-12(19),13,15,17-tetraen-10-yl)-succinamide 1MMQ
MA M10.009 matrix metallopeptidase-12 1JK3
MA M10.013 matrix metallopeptidase-13 catalytic domain 1CXV
MA M10.016 membrane-type matrix metallopeptidase-3 catalytic domain 1RM8_A
MA M10.051 serralysin complex with CBZ-Leu-hydroxyaminoalanine 1AF0
MA M10.054 peptidase C (Erwinia-type) 1K7G
MA M10.056 aeruginolysin 1AKL
MA M10.062 psychrophilic alkaline metallopeptidase (Pseudomonas sp.) 1H71
MA M10.UPA subfamily M10A unassigned peptidases 3P24
MA M12.001 astacin 1AST
MA M12.005 procollagen C-peptidase peptidase domain only 3EDG
MA M12.007 choriolysin H 3LQB
MA M12.016 vertebrate tolloid-like 1 protein peptidase domain only 3EDI
MA M12.131 acutolysin A crystallized at pH 7.5 1BSW
MA M12.140 bothropasin Complex with POL647 inhibitor 3DSL
MA M12.141 adamalysin 1IAG
MA M12.144 atrolysin C form D 1DTH
MA M12.155 trimerelysin II 1WNI_A
MA M12.158 russellysin 2E3X
MA M12.186 vascular apoptosis-inducing protein 1 2ERP
MA M12.217 ADAM17 peptidase catalytic domain 1BKC_A
MA M12.221 ADAMTS4 peptidase complex with inhibitor N-(4’-[(4-isobutyrylphenoxy)methyl]biphenyl- 4-ylsulfonyl)-D-valine 2RJP_A
MA M12.222 ADAMTS1 peptidase catalytic domain and cysteine-rich domain (apo-form) 2V4B_A
MA M12.225 ADAMTS5 peptidase high resolution crystal structure of the catalytic domain of adamts-5 (aggrecanase-2) 3B8Z_A
MA M12.242 TM-3 peptidase (Trimeresurus mucrosquamatus) complex with cadmium 1KUF
MA M12.244 ADAM33 peptidase Catalytic domain only 1R55_A
MA M12.311 BaP1 peptidase (Bothrops asper) 1ND1_A
MA M12.332 catrocollastatin form 2- 1 crystal 2DW0_A
MA M12.337 acutolysin F 1QUA
MA M13.001 neprilysin complex with phosphoramidon 1DMT_A
MA M13.002 endothelin-converting enzyme 1 complex with phosphoramidon 3DWB
MA M13.009 Zmp1 peptidase (Mycobacterium-type) complex with phosphoramidon 3ZUK
MC M14.001 carboxypeptidase A1 complex with glycyl-L-tyrosine 3CPA
MC M14.001 carboxypeptidase A1 precursor 1PCA
MC M14.002 carboxypeptidase A2 precursor 1AYE
MC M14.003 carboxypeptidase B precursor 1NSA
MC M14.004 carboxypeptidase N catalytic domain only 2NSM
MC M14.006 carboxypeptidase M 1UWY
MC M14.007 carboxypeptidase T 1OBR
MC M14.009 carboxypeptidase B2 3D66_A
MC M14.009 carboxypeptidase B2 complex with tick carboxypeptidase inhibitor 3D4U_A
MC M14.011 metallocarboxypeptidase D peptidase unit 1 domain II; complex with GEMSA 1H8L_A
MC M14.011 metallocarboxypeptidase D peptidase unit 1 domain II 1QMU_A
MC M14.017 carboxypeptidase A4 complex with human latexin 2BO9_A
MC M14.024 insect gut carboxypeptidase-1 Mature peptidase 1JQG
MD M15.001 zinc D-Ala-D-Ala carboxypeptidase (Streptomyces-type) 1LBU
MD M15.011 vanX D-Ala-D-Ala dipeptidase 1R44_A
MD M15.021 Ply500 L-Ala-D-Glu peptidase catalytic domain only 2VO9
ME M16.001 pitrilysin 1Q2L_A
ME M16.002 insulysin complex with oxidized insulin B chain 2G54
ME M16.003 mitochondrial processing peptidase beta-subunit complex with alpha subunit 1HR6_B
ME M16.012 PreP1 peptidase (Arabidopsis-type) 2FGE
ME M16.019 YMXG peptidase apoenzyme 3AMI_A
ME M16.984 insulysin unit 3 complex with oxidized insulin B chain 2G54
MF M17.001 leucine aminopeptidase 3 complex with amastatin 1BLL
MF M17.003 PepA aminopeptidase 1GYT
MF M17.A05 ZK353.6 (Caenorhabditis elegans) 2HC9_A
MH M18.002 aspartyl aminopeptidase 2IJZ_A
MH M18.003 aspartyl aminopeptidase (Plasmodium-type) 4EME
MH M18.004 apeA putative peptidase 1Y7E_A
MJ M19.001 membrane dipeptidase 1ITQ_A
MJ M19.012 Caul_3875-type dipeptidase 2RAG_A
MH M20.001 glutamate carboxypeptidase tetramer 1CG2_A
MH M20.003 peptidase T 1FNO_A
MH M20.004 peptidase V 1LFW_A
MH M20.005 carnosine dipeptidase II complex with zinc and bestatin 2ZOG
MH M20.007 Xaa-His dipeptidase 2QYV_A
MH M20.010 DapE peptidase 1VGY_A
MH M20.014 indoleacetyl amino acid hydrolase 1XMB
MH M20.015 YxeP putative peptidase TOPSAN 1YSJ_A
MH M20.016 BT3549 putative peptidase TOPSAN 3CT9
MH M20.018 BC4143 protein TOPSAN 3GB0_A
MH M20.019 HMRA peptidase (Staphylococcus-type) 3RAM
MO M23.008 gp13 peptidase (bacteriophage phi-29) 3CSQ
MO M23.013 LytM glycyl-glycine endopeptidase (Staphylococcus aureus) latent form 1QWY
MG M24.001 methionyl aminopeptidase 1 (Escherichia-type) 1MAT
MG M24.002 methionyl aminopeptidase 2 complex with TNP-470 inhibitor 1B6A
MG M24.003 Xaa-Pro dipeptidase (bacteria-type) 3L24
MG M24.004 aminopeptidase P (bacteria) complex with inhibitor Pro-Leu 1A16
MG M24.007 Xaa-Pro dipeptidase (eukaryote) 2OKN_A
MG M24.008 hyperthermophile prolidase 1WY2_A
MG M24.031 leucine aminopeptidase (Thermotoga-type) 2ZSG_A
MG M24.034 PH0974 dipeptidase 1WN1_A
MG M24.035 methionyl aminopeptidase (archaean-type) (Pyrococcus furiosus) dimer 1XGS
MA M27.001 tentoxilysin structural analysis of the catalytic domain of tetanus neurotoxin 1YVG_A
MA M27.002 bontoxilysin catalytic domain 1F82_A
MH M28.002 aminopeptidase Ap1 1AMP
MH M28.003 aminopeptidase S (Streptomyces-type) 1XJO
MH M28.010 glutamate carboxypeptidase II 1Z8L_A
MH M28.020 AM-1 aminopeptidase aminopeptidase from aneurinibacillus sp. strain am-1 with bestatin 2EK9_A
MQ M29.001 aminopeptidase T wild-type 2AYI_A
MQ M29.005 aminopeptidase S (Staphylococcus-type) 1ZJC
MA M32.001 carboxypeptidase Taq 1WGZ_A
MA M32.002 carboxypeptidase Pfu apoenzyme 1K9X_A
MA M32.003 TcMCP1 carboxypeptidase 3DWC
MA M34.001 anthrax lethal factor precursor 1J7N_B
MA M35.002 deuterolysin 1EB6_A
MA M35.004 peptidyl-Lys metallopeptidase 1G12
MJ M38.001 isoaspartyl dipeptidase (metallo-type) 1ONW
MA M41.021 FtsH peptidase (Thermotoga-type) cytoplasmic domain only 2CE7
MH M42.001 glutamyl aminopeptidase (bacterium) 1VHE_A
MH M42.003 PhTET1 aminopeptidase pyrococcus horikoshii tet1 peptidase can assemble into a tetrahedron or a large octahedral shell 2CF4_A
MH M42.004 PhTET2 aminopeptidase 1XFO_A
MH M42.006 FrvX putative peptidase TOPSAN 3CPX
MH M42.007 TM1048-type putative peptidase 1VHO
MH M42.008 YpdE-type putative peptidase 1YLO_A
MH M42.009 PhTET3 aminopeptidase 3d structure of tet3 from pyrococcus horikoshii 2VPU_A
MA M43.007 ulilysin (Methanosarcina acetivorans) complex with batimastat. 2J83_A
MA M48.019 GSU1437 putative peptidase TOPSAN 3C37
MA M49.001 dipeptidyl-peptidase III 3FVY_A
MM M50.006 MjS2P-type peptidase 3B4R_A
MN M55.001 D-aminopeptidase DppA homodecamer 1HI9
MP M67.003 Mername-AA165 peptidase dub domain 2ZNR_A
MP M67.010 JAMM-like protein (Archaeoglobus-type) 1OI0_A
MD M74.001 murein endopeptidase 1U10_A
MS M75.UPW family M75 unassigned peptidases 3N8U
MT M81.UPW family M81 unassigned peptidases 3IUU
MC M86.001 PghP gamma-polyglutamate hydrolase (bacteriophage) 3A9L
MA M90.001 MtfA peptidase 3KHI
NA N01.001 nodavirus peptide lyase complex with duplex RNA 2BBV
NA N02.001 tetravirus coat protein 1OHF
ND N04.001 Tsh-associated self-cleaving domain (Escherichia coli) and similar Asn1100Asp mutant; integral membrane domain 3AEH_A
NE N05.UPW family N5 unassigned peptide lyases mature protein 2VF1
NB N06.001 YscU protein C-terminal domain; Asn263Ala, Pro264Ala mutant 2JLJ
NB N06.003 EscU protein (Escherichia coli) cleaved C-terminal domains (215-262, 263-345) 3BZO
NC N07.001 reovirus type 1 coat protein cleaved form 1JMU_A
NA N08.001 poliovirus capsid VP0-type self-cleaving protein 1NCQ
PD N09.001 intein-containing V-type proton ATPase catalytic subunit A endonuclease PI-SCEI domain only 1VDE
PD N10.009 Mtu recA intein (Mycobacterium sp.) intein 2IN9
PE P01.001 DmpA aminopeptidase 1B65_A
PA S01.001 chymotrypsin A (cattle-type) complex with basic pancreatic trypsin inhibitor 1CBW_ABC
PA S01.001 chymotrypsin A (cattle-type) gamma-chymotrypsin A; complex with N-ac-L-Ala-L-Phe-chloroethylketone 2GMT
PA S01.010 granzyme B (Homo sapiens-type) complex with acetyl-Ile-Glu-Pro-Asp aldehyde 1IAU
PA S01.017 kallikrein-related peptidase 5 complex with leupeptin and zinc 2PSY
PA S01.021 DESC1 peptidase 2OQ5
PA S01.023 flavoxobin AAV-SP-I 1OP0_A
PA S01.035 brachyurin-T complex with crayfish trypsin 2F91_B
PA S01.094 trypsin 1 (Rattus-type) complex with benzamidine 1BRA
PA S01.101 trypsin (Streptomyces griseus-type) 1SGT
PA S01.103 trypsin (fungal) 1TRY
PA S01.109 astrovirus serine peptidase structural and biochemical analysis of human pathogenic astrovirus serine protease at 2.0 angstrom resolution 2W5E_A
PA S01.119 trypsin-2 type C 1DPO
PA S01.121 hypodermin C 1HYL
PA S01.122 brachyurin-C complex with ecotin inhibitor 1AZZ_A
PA S01.125 trypsin-1 (fish) complex with benzamidine inhibitor 1BIT
PA S01.126 trypsin-3 (fish) complex with benzamidine inhibitor 1A0J
PA S01.127 cationic trypsin (Homo sapiens-type) complex with DFP 1TRN
PA S01.131 elastase-2 complex with MeOSuc-Ala-Ala-Pro-Ala chloromethyl ketone 1HNE
PA S01.133 cathepsin G complex with Suc-Val-Pro-PhEP inhibitor 1CGH
PA S01.134 myeloblastin 1FUJ
PA S01.135 granzyme A complex with D-Phe-Pro-deoxo-methyl-Arg 1ORF
PA S01.137 granzyme C 3FZZ
PA S01.139 granzyme M 2ZGC_A
PA S01.140 chymase (Homo sapiens-type) complex with PMSF 1KLT
PA S01.141 mast cell peptidase 1 (Rattus-type) 3RP2
PA S01.142 duodenase 1EUF
PA S01.143 tryptase alpha Asp216Gly mutant; complex with leupeptin 2F9P
PA S01.146 granzyme K precursor 1MZA
PA S01.150 mast cell peptidase 5 (mouse numbering) hamster chymase 2 2RDL_A
PA S01.151 trypsin 1 complex with leupeptin 1JRS
PA S01.152 chymotrypsin B trypsin-like mutant (Ser189Asp, Ala226Gly) 2JET_A
PA S01.153 elastase-1 complex with trifluoroacetyl-L-Phe-P-isopropylanilide 1ELC
PA S01.155 pancreatic elastase II complex with GR143783 inhibitor 1BRU
PA S01.156 enteropeptidase peptidase domain; complex with Val-Asp-Asp-Asp-Asp-Lys-chloromethyl ketone inhibitor 1EKB
PA S01.157 chymotrypsin C complex of procarboxypeptidase A, proproteinase E and chymotrypsinogen C 1PYT_C
PA S01.159 prostasin 3DFJ
PA S01.160 kallikrein 1 complex with bovine pancreatic trypsin inhibitor 2KAI_AB
PA S01.162 kallikrein-related peptidase 3 2ZCH_P
PA S01.170 kallikrein 1-related peptidase b3 1SGF_G
PA S01.171 kallikrein 1 (Equus caballus) 1GVZ
PA S01.172 kallikrein 1-related peptidase c2 (Rattus norvegicus) 1TON
PA S01.173 kallikrein 13 (Mus musculus) 1AO5
PA S01.174 mesotrypsin complex with bovine pancreatic trypsin inhibitor 2R9P_A
PA S01.186 snake venom plasminogen activator complex with Glu-Gly-Arg-chloromethylketone inhibitor 1BQY
PA S01.191 complement factor D complex with isatoic anhydride inhibitor 1BIO
PA S01.192 complement component activated C1r precursor 1MD7_A
PA S01.193 complement component activated C1s catalytic domain 1ELV
PA S01.194 complement component C2a catalytic component 2a only 2ODP
PA S01.196 complement factor Bb catalytic domain 1DLE_A
PA S01.198 mannan-binding lectin-associated serine peptidase 1 catalytic domain 3GOV_A
PA S01.204 prophenoloxidase-activating peptidase-I peptidase unit only 2OLG
PA S01.212 plasma kallikrein catalytic domain only 2ANY
PA S01.213 coagulation factor XIa catalytic domain; complex with Kunitz protease inhibitor domain of protease nexin II 1ZJD_A
PA S01.214 coagulation factor IXa complex with D-Phe-Pro-Arg 1PFX
PA S01.215 coagulation factor VIIa complex with soluble recombinant tissue factor 1DAN
PA S01.216 coagulation factor Xa factor Xa 1HCG
PA S01.217 thrombin complex with D-Phe-Pro-Arg chloromethylketone 1ABJ
PA S01.218 protein C (activated) complex with inhibitor beta-hydroxy-Asp-D-Phe-deoxy-methyl-Arg 1AUT
PA S01.223 acrosin 1FIZ
PA S01.224 hepsin 1O5F_L
PA S01.228 hepatocyte growth factor activator 1YBW
PA S01.229 mannan-binding lectin-associated serine peptidase 2 catalytic domain only 1Q3X
PA S01.231 urokinase-type plasminogen activator peptidase domain; complex with Glu-Gly-Arg chloromethyl ketone 1LMW
PA S01.232 t-plasminogen activator catalytic domain; complex with benzamidine 1RTF
PA S01.233 plasmin catalytic domain; complex with staphylokinase and Glu-Gly-deoxo-methylArg 1BUI_A
PA S01.236 kallikrein-related peptidase 6 precursor 1GVL
PA S01.236 kallikrein-related peptidase 6 complex with benzamidine inhibitor 1LO6_A
PA S01.239 plasminogen activator (Desmodus-type) catalytic domain. 1A5I
PA S01.243 lumbrokinase two-chain form 1YM0
PA S01.244 kallikrein-related peptidase 8 dimer 1NPM
PA S01.251 kallikrein-related peptidase 4 human kallikrein 4 complex with nickel and p- aminobenzamidine 2BDG_A
PA S01.261 streptogrisin A complex with chymostatin 1SGC
PA S01.262 streptogrisin B complex with turkey ovomucoid third domain 1SGP_E
PA S01.267 streptogrisin E complex with tetrapeptide ligand 1HPG
PA S01.268 alpha-lytic endopeptidase 2ALP
PA S01.269 glutamyl endopeptidase I 1QY6
PA S01.270 exfoliatin A 1EXF
PA S01.273 DegP peptidase dimer 1KY9_A
PA S01.275 DegS peptidase complex with activating decapeptide 1SOZ
PA S01.278 HtrA2 peptidase 1LCY_A
PA S01.280 lysyl endopeptidase (bacteria) complex with N(alpha)-p-tosyl-L-Lys chloromethylketone 1ARC
PA S01.282 SplB peptidase (Staphylococcus aureus) 2VID
PA S01.283 SplC peptidase (Staphylococcus aureus) functional and structural characterization of spl proteases from staphylococcus aureus 2AS9_A
PA S01.300 kallikrein-related peptidase 7 high resolution structure of human kallikrein 7 in complex with suc-ala-ala-pro-phe-chloromethylketone 2QXI_A
PA S01.302 matriptase 2GV6_A
PA S01.393 NAPase (Nocardiopsis alba) 2OUA
PA S01.422 fibrinolytic enzyme A (Annelida-type) 1M9U
PA S01.431 SFase-2 endopeptidase 2SFA
PA S01.438 fire ant chymotrypsin complex with PMSF 1EQ9
PA S01.443 glutamyl peptidase BI complex with 2-methyl-2,4-pentanediol 1P3E
PA S01.466 ACC-C peptidase benzamidine-inhibited 2AIQ_A
PA S01.470 cellulomonadin 2EA3
PA S01.491 HtrA peptidase (Thermotoga maritima-type) peptidase domain only. 1L1J
PA S01.502 Grass peptidase (Insecta) 2XXL
PA S01.931 kallikrein 1-related peptidase b4 (Mus musculus) complex with beta and gamma chains 1SGF_A
PA S01.UPE subfamily S1E unassigned peptidases 2PFE
PA S03.001 togavirin 2SNV
PA S06.003 Tsh peptidase 1WXR
PA S07.003 Zika virus NS2B-NS3 peptidase complex with Bz-Nle-Lys- Arg-Arg-H 2FP7
SB S08.001 subtilisin Carlsberg complex with N-tert-butoxycarbonyl-Ala-Pro-Phe-O-benzoyl hydroxylamine 1SCN
SB S08.002 mesentericopeptidase complex with eglin-C 1MEE_A
SB S08.003 subtilisin lentus 1ST3
SB S08.003 subtilisin lentus 1GCI
SB S08.007 thermitase 1THM
SB S08.009 subtilisin Ak1 1DBI
SB S08.010 M-peptidase 1MPT
SB S08.020 C5a peptidase 1XF1_A
SB S08.020 C5a peptidase 3EIF
SB S08.021 fervidolysin 1R6V
SB S08.022 bpr peptidase (Dichelobacter nodosus) 3TI9
SB S08.030 IspA peptidase precursor 2X8J
SB S08.034 subtilisin BPN’ complex with chymotrypsin inhibitor 2 2SNI_E
SB S08.036 subtilisin E Ser221Cys mutant; complex with propeptide 1SCJ_A
SB S08.037 subtilisin DY complex with N-Bz-Ala-Pro-Phe-choromethyl ketone inhibitor 1BH6
SB S08.039 PCSK9 peptidase 2P4E_P
SB S08.054 endopeptidase K 2PRK
SB S08.070 kexin complex with N-acetyl-L-alanyl-6-ammonio-N-[(1R)-4-carbamimidamido-1-(dihydroxyboranyl)butyl]-L-norleucinamide 1OT5_A
SB S08.071 furin homooctomer 1P8J
SB S08.113 sfericase 2IXT
SB S08.123 KP-43 peptidase 1WMD_A
SB S08.125 AspA (Aeromonas sobria)-type peptidase 3HJR
SB S08.129 Tk-subtilisin Ser324Alamutant; complex with Gly56Glu-propeptide mutant 2Z57_A
SB S08.151 SlSBT3 g.p. (Solanum lycopersicum) 3I6S
SB S08.UPA subfamily S8A unassigned peptidases 2B6N_A
SB S08.UPA subfamily S8A unassigned peptidases complex with chymostatin 1WVM_A
SC S09.001 prolyl oligopeptidase complex with Z-Pro-prolinal inhibitor 1QFS
SC S09.003 dipeptidyl-peptidase IV (eukaryote) complex with inhibitor 2-amino-3-methyl-1-pyrrolidin-1-yl-butan-1-one 1N1M_A
SC S09.007 fibroblast activation protein alpha subunit 1Z68_A
SC S09.009 dipeptidyl-peptidase 4 (bacteria-type 1) 2ECF
SC S09.017 prolyl tripeptidyl peptidase prolyl tripeptidyl aminopeptidase mutant e636a complexd with an inhibitor 2Z3Z_A
SC S09.024 Mername-AA264 putative peptidase (LP_1002 protein) (Lactobacillus plantarum) TOPSAN 3BJR
SC S09.070 acylaminoacyl peptidase (Aeropyrum-type) 1VE6
SC S10.001 carboxypeptidase Y 1CPY
SC S10.002 serine carboxypeptidase A physiological dimer of precursor 1IVY_A
SC S10.005 serine carboxypeptidase D complex with chymostatin 1BCS
SC S10.007 kex carboxypeptidase 1AC5
SE S11.003 penicillin-binding protein 6 complex with ampicillin 3ITA
SE S11.004 K15-type DD-transpeptidase Cys98Asn mutant 1ES4
SE S11.006 D,D-carboxypeptidase PBP3 (Streptococcus-type) 1XP4_A
SE S11.008 penicillin-binding protein 5-type peptidase complex with peptide-mimetic penicillin 3BEC
SE S11.010 penicillin-binding protein 4 (Staphylococcus)-type peptidase 1TVF_A
SE S12.001 D-Ala-D-Ala carboxypeptidase B 3PTE
SE S12.002 aminopeptidase DmpB 1EI5_A
SE S12.006 class C beta-lactamase complex with (p-iodophenylacetylamino)methylphosphinic acid 1BLS
SE S12.008 Pab87 peptidase 2QMI
SE S13.001 D-Ala-D-Ala peptidase C complex with penicillin-V 2EX9_A
SE S13.002 D-Ala-D-Ala carboxypeptidase (Actinomadura-type) 1W79
SK S14.001 peptidase Clp (type 1) homotetradecamer 1TYF_A
SK S14.003 peptidase Clp (type 3) 1TG6_A
SK S14.008 ClpP1 peptidase (Streptomyces-type) peptidase subunit only 2CE3
SK S14.011 PFC0310c peptidase catalytic domain 2F6I_A
SC S15.001 Xaa-Pro dipeptidyl-peptidase 1LNS_A
SJ S16.001 Lon-A peptidase catalytic domain only 1RR9_A
SJ S16.005 Lon-B peptidase proteolytic domain 1Z0E_A
SJ S16.008 protease La (Methanocaldococcus-type) 1XHK_A
SH S21.001 assemblin with di-isopropyl phosphate covalently bound to active site Ser129 1AT3_A
SH S21.002 cytomegalovirus assemblin Ala143Val mutant 1LAY
SH S21.003 Epstein-Barr virus-type assemblin 1O6E
SH S21.005 Varicella zoster assemblin residues 10-236; Cys10Met mutant 1VZV
SH S21.006 herpesvirus 8-type assemblin 1FL1_A
SF S24.001 repressor LexA Gly85Asp mutant 1JHF_A
SF S24.002 phage lambda repressor protein C-terminal domain 1F39
SF S24.003 UmuD protein UmuD’; selenomethionyl derivative 1UMU
SF S26.001 signal peptidase I complex with beta-lactam inhibitor (5S,6S)-6-[(R)acetoxyeth-2-yl]-penem-3-carboxylatepropane 1B12_A
SC S28.001 lysosomal Pro-Xaa carboxypeptidase 3N2Z
SC S28.002 dipeptidyl-peptidase II 3JYH
PA S29.001 hepacivirin complex with NS4A peptide 1A1R
PA S32.001 equine arteritis virus serine peptidase 1MBM_A
SC S33.001 prolyl aminopeptidase 1QTR_A
SC S33.005 tricorn interacting factor F1 1MTZ
SC S33.016 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (Burkholderia-type) 2OG1_A
PA S39.001 sobemovirus peptidase peptidase domain only 1ZYO
SK S41.002 C-terminal processing peptidase-2 1FC6_A
SK S41.005 tricorn core peptidase (archaea) 1K32
PB S45.001 penicillin G acylase precursor complex with calcium 1PNK
PB S45.002 cephalosporin acylase precursor 1OR0
PB S45.002 cephalosporin acylase precursor 2AE4
PB S45.003 cephalosporin C acylase precursor precursor. 1KEH
SK S49.005 archaean signal peptide peptidase 1 2DEO
SJ S50.001 infectious pancreatic necrosis birnavirus Vp4 peptidase 2PNL
SJ S50.004 blotched snakehead birnavirus Vp4 peptidase 2GEF
PC S51.001 dipeptidase E 1FYE_A
PC S51.003 cyanophycinase 3EN0
SB S53.001 sedolisin complex with pseudoiodotyrostatin inhibitor 1GA4
SB S53.001 sedolisin complex with a fragment of tyrostatin 1GA6
SB S53.003 tripeptidyl-peptidase I precursor 3EDY
SB S53.004 kumamolisin precursor 1T1E_A
SB S53.009 kumamolisin-As kumamolisin-as, apoenzyme 1SN7_A
ST S54.016 GlpG peptidase (Escherichia-type) 2IC8
ST S54.024 GlpG peptidase (Haemophilus-type) 2NR9
SP S59.001 nucleoporin 145 autoproteolytic domain 1KO6
SR S60.001 lactoferrin N-terminal half molecule 1LCT
SR S60.970 lactotransferrin precursor, domain 2 N-terminal lobe, holo form 1IEJ_A
SS S66.001 murein tetrapeptidase LD-carboxypeptidase (Pseudomonas-type) 1ZRS
SS S66.003 microcin C7 immunity protein 3GJZ_A
SJ S69.001 Tellina virus 1 VP4 peptidase 3P06
S- S71.001 MUC1 self-cleaving mucin NMR structure 2ACM
SO S74.001 Escherichia coli phage K1F endosialidase CIMCD self-cleaving protein 3GW6
PB T01.002 archaean proteasome, beta component 1PMA_B
PB T01.006 HslV component of HslUV peptidase complex with HslU 1G4A
PB T01.007 CodW component of CodWX peptidase 2Z3B
PB T01.010 proteasome subunit beta1c 20S proteasome 1RYP_H
PB T01.012 proteasome subunit beta5c complete proteasome 1G0U_K
PB T02.001 glycosylasparaginase precursor 1APY_A
PB T02.002 isoaspartyl dipeptidase (threonine type) 1T3M
PB T02.004 taspase-1 activated form 2A8J
PB T02.007 Chryseobacterium meningosepticum-type N4-(beta-N-acetylglucosaminyl)-L-asparaginase complex with substrate 2GL9_A
PB T03.001 gamma-glutamyltransferase 1 (bacterial-type) 2DBU_A
PE T05.002 ArgJ protein (archea) processed heterodimer 1VRA
U- U62.004 TM0727-type putative peptidase 1VL4