Structure for peptidase A01.001: pepsin A

Summary Alignment Tree Sequences Sequence features Distribution Structure Literature Substrates Pharma

 

PDB Organism Resolution Comment
1PSO Homo sapiens 2.00 Å pepsin 3A; complex with pepstatin
Active site residues are shown in ball-and-stick representation: Asp94 and Asp277 in pink, and Tyr137 in green. Pepstatin is shown in grey in ball-and-stick representation.
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3PSG Sus scrofa 1.65 Å precursor
Active site residues are shown in ball-and-stick representation: Asp91 and Asp274 in pink. Asp70, which interacts with the propeptide, is shown in pink, and Tyr52, which blocks the substrate-binding site, is shown in green.
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TERTIARY STRUCTURE DATA
Comment Resolution PDB PDBe SCOP CATH PDBSum Proteopedia Reference
Homo sapiens
Uropepsin 2.45 Å 1FLH 1FLH 1FLH 1FLH 1FLH 1FLH Canduri et al., 2001
pepsin 3A 2.20 Å 1PSN 1PSN 1PSN 1PSN 1PSN 1PSN Fujinaga et al., 1995
pepsin 3A; complex with pepstatin 2.00 Å 1PSO 1PSO 1PSO 1PSO 1PSO 1PSO Fujinaga et al., 1995
complex with phosphonate inhibitor Iva-Val-Val-Leu(P)-(O)Phe-Ala-Ala-Ome 1.96 Å 1QRP 1QRP 1QRP 1QRP 1QRP 1QRP Fujinaga et al., 2000
Sus scrofa
complex with Ascaris suum pepsin inhibitor-3 2.45 Å 1F34 1F34 1F34 1F34 1F34 1F34 Ng et al., 2000
complex with A-62905 2.90 Å 1PSA 1PSA 1PSA 1PSA 1PSA 1PSA Chen et al., 1992
effect of dimethyl sulphoxide 3.00 Å 1YX9 1YX9 1YX9 1YX9 1YX9 1YX9 Kesavulu et al., 2005
precursor 1.80 Å 2PSG 2PSG 2PSG 2PSG 2PSG 2PSG Sielecki et al., 1991
mature  peptidase 2.30 Å 3PEP 3PEP 3PEP 3PEP 3PEP 3PEP Abad-Zapatero et al., 1990
precursor 1.65 Å 3PSG 3PSG 3PSG 3PSG 3PSG 3PSG Hartsuck et al., 1992
mature  peptidase 1.80 Å 4PEP 4PEP 4PEP 4PEP 4PEP 4PEP Sielecki et al., 1990
mature  peptidase 2.34 Å 5PEP 5PEP 5PEP 5PEP 5PEP 5PEP Cooper et al., 1990