Structure for peptidase S13.001: D-Ala-D-Ala peptidase C

Summary Alignment Tree Sequences Sequence features Distribution Structure Literature Substrates Pharma

 

PDB Organism Resolution Comment
2EX9_A Escherichia coli 1.65 Å complex with penicillin-V
The catalytic residues are shown in ball-and-stick representation: Ser62 in orange, Lys65 in purple and Ser306 in orange. The bound substrate penicillin-V is shown in grey ball-and-stick representation.
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TERTIARY STRUCTURE DATA
Comment Resolution PDB PDBe SCOP CATH PDBSum Proteopedia Reference
Escherichia coli
mature  peptidase 1.55 Å 2EX2 2EX2 2EX2 2EX2 2EX2 2EX2 Kishida et al., 2006
complex with ampicillin 1.60 Å 2EX6 2EX6 2EX6 2EX6 2EX6 2EX6 Kishida et al., 2006
complex with penicillin-G 1.60 Å 2EX8 2EX8 2EX8 2EX8 2EX8 2EX8 Kishida et al., 2006
complex with penicillin-V 1.65 Å 2EX9 2EX9 2EX9 2EX9 2EX9 2EX9 Kishida et al., 2006
complex with Farom 1.70 Å 2EXA 2EXA 2EXA 2EXA 2EXA 2EXA Kishida et al., 2006
complex with Flomox 1.75 Å 2EXB 2EXB 2EXB 2EXB 2EXB 2EXB Kishida et al., 2006
Haemophilus influenzae
mature  peptidase 1.60 Å 3A3D 3A3D 3A3D 3A3D 3A3D 3A3D Kawai et al., 2010
mature  peptidase 2.40 Å 3A3E 3A3E 3A3E 3A3E 3A3E 3A3E Kawai et al., 2010
mature  peptidase 2.10 Å 3A3F 3A3F 3A3F 3A3F 3A3F 3A3F Kawai et al., 2010
mature  peptidase 2.00 Å 3A3I 3A3I 3A3I 3A3I 3A3I 3A3I Kawai et al., 2010