Structure for peptidase M13.001: neprilysin

Summary Gene structure Alignment Tree Sequences Sequence features Distribution Structure Literature Substrates Pharma

 

PDB Organism Resolution Comment
1DMT_A Homo sapiens 2.10 Å complex with phosphoramidon
The catalytic zinc is shown as a light grey CPK sphere. The zinc ligands are shown in ball-and-stick representation: His583 and His587 in purple and Glu646 in blue. The catalytic residues are shown in ball-and-stick representation: Glu584 in blue and Asp650 in pink. Carbohydrates are shown as CPK spheres in yellow.
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TERTIARY STRUCTURE DATA
Comment Resolution PDB PDBe SCOP CATH PDBSum Proteopedia Reference
Homo sapiens
theoretical model of peptidase domain (residues 507-749) 0.00 Å 1DL9 1DL9 1DL9 1DL9 1DL9 1DL9
complex with phosphoramidon 2.10 Å 1DMT 1DMT 1DMT 1DMT 1DMT 1DMT Oefner et al., 2000
mature  peptidase 0.00 Å 1QVD 1QVD 1QVD 1QVD 1QVD 1QVD
structural analysis of neprilysin with various specific and potent inhibitors 1.95 Å 1R1H 1R1H 1R1H 1R1H 1R1H 1R1H Oefner et al., 2004
structural analysis of neprilysin with various specific and potent inhibitors 2.60 Å 1R1I 1R1I 1R1I 1R1I 1R1I 1R1I Oefner et al., 2004
structural analysis of neprilysin with various specific and potent inhibitors 2.35 Å 1R1J 1R1J 1R1J 1R1J 1R1J 1R1J Oefner et al., 2004
complex with an imidazo[4, 5-C]pyridine inhibitor 2.25 Å 1Y8J 1Y8J 1Y8J 1Y8J 1Y8J 1Y8J
human nep complexed with a bifunctional nep/dpp iv inhibitor 2.05 Å 2QPJ 2QPJ 2QPJ 2QPJ 2QPJ 2QPJ Oefner et al., 2007
mature  peptidase 2.40 Å 2YB9 2YB9 2YB9 2YB9 2YB9 2YB9 Glossop et al., 2011
mature  peptidase 2.15 Å 4CTH 4CTH 4CTH 4CTH 4CTH 4CTH Webster et al., 2014
neprilysin complex with lbq657 2.00 Å 5JMY 5JMY 5JMY 5JMY 5JMY 5JMY
mature  peptidase 1.90 Å 6GID 6GID 6GID 6GID 6GID 6GID
Mus musculus
mature  peptidase 3.20 Å 2YVC 2YVC 2YVC 2YVC 2YVC 2YVC Terawaki et al., 2007
Oryctolagus cuniculus
soluble rabbit neprilysin 2.11 Å 4XBH 4XBH 4XBH 4XBH 4XBH 4XBH
complex with phosphoramidon 2.80 Å 4ZR5 4ZR5 4ZR5 4ZR5 4ZR5 4ZR5
soluble rabbit neprilysin in complex with thiorphan 3.00 Å 5V48 5V48 5V48 5V48 5V48 5V48