Structure for peptidase S01.125: trypsin-1 (fish)

Summary Alignment Tree Sequences Sequence features Distribution Structure Literature Substrates

PDB	Organism	Resolution	Comment
1BIT	Salmo salar	1.83 Å	complex with benzamidine inhibitor
The structural calcium ion is shown as yellow CPK sphere. Catalytic residues are shown in ball-and-stick representation: His60 in purple, Asp104 in pink and Ser196 in orange.

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TERTIARY STRUCTURE DATA
Comment	Resolution	PDB	PDBe	SCOP	CATH	PDBSum	Proteopedia	Reference
Gadus morhua
complex with benzamidine	1.85 Å	2EEK	2EEK	2EEK	2EEK	2EEK	2EEK
Oncorhynchus keta
mature peptidase	1.80 Å	1MBQ	1MBQ	1MBQ	1MBQ	1MBQ	1MBQ	Toyota et al., 2002
crystal structure of anionic trypsin isoform 1 from chum salmon	1.90 Å	2ZPQ	2ZPQ	2ZPQ	2ZPQ	2ZPQ	2ZPQ
crystal structure of anionic trypsin isoform 2 from chum salmon	1.75 Å	2ZPR	2ZPR	2ZPR	2ZPR	2ZPR	2ZPR
crystal structure of anionic trypsin isoform 3 from chum salmon	1.55 Å	2ZPS	2ZPS	2ZPS	2ZPS	2ZPS	2ZPS
Salmo salar
complex with benzamidine inhibitor	1.83 Å	1BIT	1BIT	1BIT	1BIT	1BIT	1BIT	Berglund et al., 1995
complex with bovine pancreatic trypsin inhibitor	2.10 Å	1BZX	1BZX	1BZX	1BZX	1BZX	1BZX	Helland et al., 1998
1.00 aa trypsin from atlantic salmon	1.00 Å	1HJ8	1HJ8	1HJ8	1HJ8	1HJ8	1HJ8	Leiros et al., 2001
complex with benzamidine	1.80 Å	1TBS	1TBS	1TBS	1TBS	1TBS	1TBS	Smalas et al., 1994
trypsin specificity as elucidated by lie calculations, x- ray structures and association constant measurements	1.83 Å	1UTJ	1UTJ	1UTJ	1UTJ	1UTJ	1UTJ	Leiros et al., 2004
trypsin specificity as elucidated by lie calculations, x- ray structures and association constant measurements	1.53 Å	1UTK	1UTK	1UTK	1UTK	1UTK	1UTK	Leiros et al., 2004
trypsin specificity as elucidated by lie calculations, x- ray structures and association constant measurements	1.70 Å	1UTL	1UTL	1UTL	1UTL	1UTL	1UTL	Leiros et al., 2004
trypsin specificity as elucidated by lie calculations, x- ray structures and association constant measurements	1.50 Å	1UTM	1UTM	1UTM	1UTM	1UTM	1UTM	Leiros et al., 2004
complex with squash seed inhibitor	1.80 Å	2STA	2STA	2STA	2STA	2STA	2STA	Helland et al., 1999
complex with squash seed inhibitor	1.80 Å	2STB	2STB	2STB	2STB	2STB	2STB	Helland et al., 1999
complex with benzamidine inhibitor	1.80 Å	2TBS	2TBS	2TBS	2TBS	2TBS	2TBS	Smalas et al., 1994