Structure for peptidase S12.001: D-Ala-D-Ala carboxypeptidase B

Summary Alignment Tree Sequences Sequence features Distribution Structure Literature Substrates Pharma

PDB	Organism	Resolution	Comment
3PTE	Streptomyces lividans	1.60 Å	mature
Catalytic residues are shown in ball-and-stick representation: Ser93 in orange, Lys96 in blue, and Tyr190 in green.

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TERTIARY STRUCTURE DATA
Comment	Resolution	PDB	PDBe	SCOP	CATH	PDBSum	Proteopedia	Reference
Streptomyces lividans
mature peptidase	2.04 Å	1CEF	1CEF	1CEF	1CEF	1CEF	1CEF	Kuzin et al., 1995
complex with cephalothin	1.76 Å	1CEG	1CEG	1CEG	1CEG	1CEG	1CEG	Kuzin et al., 1995
complex with a cephalosporin analogue of cell wall peptidoglycan	1.17 Å	1HVB	1HVB	1HVB	1HVB	1HVB	1HVB	Lee et al., 2001
complex with a specific peptidoglycan substrate fragment	1.90 Å	1IKG	1IKG	1IKG	1IKG	1IKG	1IKG	McDonough et al., 2002
complex with the products of a specific peptidoglycan substrate fragment	1.25 Å	1IKI	1IKI	1IKI	1IKI	1IKI	1IKI	McDonough et al., 2002
phosphonate-inhibited	1.12 Å	1MPL	1MPL	1MPL	1MPL	1MPL	1MPL	Silvaggi et al., 2003
complex with penicillin	1.20 Å	1PW1	1PW1	1PW1	1PW1	1PW1	1PW1	Silvaggi et al., 2005
complex with cephalosporin	1.30 Å	1PW8	1PW8	1PW8	1PW8	1PW8	1PW8	Silvaggi et al., 2005
complex with penicillin G	1.10 Å	1PWC	1PWC	1PWC	1PWC	1PWC	1PWC	Silvaggi et al., 2005
complex with cephalosporin C	1.20 Å	1PWD	1PWD	1PWD	1PWD	1PWD	1PWD	Silvaggi et al., 2005
complex with penicillin	1.07 Å	1PWG	1PWG	1PWG	1PWG	1PWG	1PWG	Silvaggi et al., 2005
complex with monocyclic phosphate inhibitor (2Z)-3-[oxido(oxo)phosphino]oxy-2-phenylacrylate	1.13 Å	1SCW	1SCW	1SCW	1SCW	1SCW	1SCW	Silvaggi et al., 2004
complex with bicyclic phosphate inhibitor 2-[(dioxidophosphino)oxy]benzoate	1.15 Å	1SDE	1SDE	1SDE	1SDE	1SDE	1SDE	Silvaggi et al., 2004
inhibition of the r61 dd-peptidase by n-benzoyl-beta-sultam	1.05 Å	1YQS	1YQS	1YQS	1YQS	1YQS	1YQS	Llinas et al., 2005
mature peptidase	0.00 Å	2PTE	2PTE	2PTE	2PTE	2PTE	2PTE
mature peptidase	1.60 Å	3PTE	3PTE	3PTE	3PTE	3PTE	3PTE	Kelly & Kuzin, 1995
Streptomyces sp. R61
mature peptidase	2.04 Å	1CEF	1CEF	1CEF	1CEF	1CEF	1CEF	Kuzin et al., 1995
mature peptidase	1.80 Å	1CEG	1CEG	1CEG	1CEG	1CEG	1CEG	Kuzin et al., 1995
mature peptidase	1.17 Å	1HVB	1HVB	1HVB	1HVB	1HVB	1HVB	Lee et al., 2001
mature peptidase	1.90 Å	1IKG	1IKG	1IKG	1IKG	1IKG	1IKG	McDonough et al., 2002
mature peptidase	1.25 Å	1IKI	1IKI	1IKI	1IKI	1IKI	1IKI	McDonough et al., 2002
mature peptidase	1.12 Å	1MPL	1MPL	1MPL	1MPL	1MPL	1MPL	Silvaggi et al., 2003
mature peptidase	1.20 Å	1PW1	1PW1	1PW1	1PW1	1PW1	1PW1	Silvaggi et al., 2005
mature peptidase	1.30 Å	1PW8	1PW8	1PW8	1PW8	1PW8	1PW8	Silvaggi et al., 2005
mature peptidase	1.10 Å	1PWC	1PWC	1PWC	1PWC	1PWC	1PWC	Silvaggi et al., 2005
mature peptidase	1.20 Å	1PWD	1PWD	1PWD	1PWD	1PWD	1PWD	Silvaggi et al., 2005
mature peptidase	1.07 Å	1PWG	1PWG	1PWG	1PWG	1PWG	1PWG	Silvaggi et al., 2005
mature peptidase	1.13 Å	1SCW	1SCW	1SCW	1SCW	1SCW	1SCW	Silvaggi et al., 2004
mature peptidase	1.15 Å	1SDE	1SDE	1SDE	1SDE	1SDE	1SDE	Silvaggi et al., 2004
mature peptidase	1.05 Å	1YQS	1YQS	1YQS	1YQS	1YQS	1YQS	Llinas et al., 2005
mature peptidase	0.00 Å	2PTE	2PTE	2PTE	2PTE	2PTE	2PTE
mature peptidase	1.60 Å	3PTE	3PTE	3PTE	3PTE	3PTE	3PTE	Kelly & Kuzin, 1995