Structure for peptidase C01.073: peptidase 1 (mite)

Summary Alignment Tree Sequences Sequence features Distribution Structure Literature Substrates

 

PDB Organism Resolution Comment
1XKG Dermatophagoides pteronyssinus 1.61 Å precursor; mutant form
Catalytic residues are shown in ball-and-stick representation: Cys132 (changed to Ala) in yellow, Gln126 and Asn288 in pink, and His268 in purple.
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TERTIARY STRUCTURE DATA
Comment Resolution PDB PDBe SCOP CATH PDBSum Proteopedia Reference
Dermatophagoides farinae
mature  peptidase 2.00 Å 3D6S 3D6S 3D6S 3D6S 3D6S 3D6S Chruszcz et al., 2009
mature  peptidase 1.90 Å 3RVV 3RVV 3RVV 3RVV 3RVV 3RVV Chruszcz et al., 2012
mature  peptidase 2.00 Å 5VPK 5VPK 5VPK 5VPK 5VPK 5VPK
complex with fab 4c1 1.90 Å 5VPL 5VPL 5VPL 5VPL 5VPL 5VPL
Dermatophagoides pteronyssinus
precursor; mutant form 1.61 Å 1XKG 1XKG 1XKG 1XKG 1XKG 1XKG Meno et al., 2005
mature  peptidase 1.95 Å 2AS8 2AS8 2AS8 2AS8 2AS8 2AS8 de et al., 2006
c2 crystal form of mite allergen der p 1 1.36 Å 3F5V 3F5V 3F5V 3F5V 3F5V 3F5V Chruszcz et al., 2009
mature  peptidase 1.95 Å 3RVW 3RVW 3RVW 3RVW 3RVW 3RVW Chruszcz et al., 2012
mature  peptidase 2.50 Å 3RVX 3RVX 3RVX 3RVX 3RVX 3RVX Chruszcz et al., 2012
mature  peptidase 3.00 Å 4PP1 4PP1 4PP1 4PP1 4PP1 4PP1
mature  peptidase 2.74 Å 4PP2 4PP2 4PP2 4PP2 4PP2 4PP2
complex with fab fragment of mab 5h8 3.00 Å 5VCN 5VCN 5VCN 5VCN 5VCN 5VCN
complex with fab fragment of mab 10b9 2.74 Å 5VCO 5VCO 5VCO 5VCO 5VCO 5VCO
complex with fab 4c1 1.95 Å 5VPG 5VPG 5VPG 5VPG 5VPG 5VPG
complex with fab 4c1 2.50 Å 5VPH 5VPH 5VPH 5VPH 5VPH 5VPH