Structure for peptidase C56.001: PfpI peptidase

Summary Alignment Tree Sequences Sequence features Distribution Structure Literature Substrates

 

PDB Organism Resolution Comment
1G2I_A Pyrococcus horikoshii 2.00 Å mature
One monomer of the homotrimer is shown. Catalytic residues are shown in ball-and-stick representation: Cys100 in yellow and His101 in purple.
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TERTIARY STRUCTURE DATA
Comment Resolution PDB PDBe SCOP CATH PDBSum Proteopedia Reference
Anabaena variabilis
TOPSAN 1.90 Å 3FSE 3FSE 3FSE 3FSE 3FSE 3FSE
Pyrococcus horikoshii
mature  peptidase 2.00 Å 1G2I 1G2I 1G2I 1G2I 1G2I 1G2I Du et al., 2000
co- cystallized in presence of 10 mm tb-xo4 and ammonium sulfate. 1.65 Å 6F2F 6F2F 6F2F 6F2F 6F2F 6F2F
co-crystallized in presence of 10 mm tb-xo4 and potassium iodide. 2.19 Å 6F2H 6F2H 6F2H 6F2H 6F2H 6F2H
crystal structure of the protease 1 (e29a,e60a,e80a) from pyrococcus horikoshii co-crystallized with tb-xo4. 2.00 Å 6HF6 6HF6 6HF6 6HF6 6HF6 6HF6
at room temperature in chipx microfluidic device 2.15 Å 6Q3T 6Q3T 6Q3T 6Q3T 6Q3T 6Q3T
Staphylococcus aureus
sav1875 2.10 Å 4Y0N 4Y0N 4Y0N 4Y0N 4Y0N 4Y0N
sav1875-c105d 1.80 Å 4Y1E 4Y1E 4Y1E 4Y1E 4Y1E 4Y1E
sav1875-e17d 1.80 Å 4Y1F 4Y1F 4Y1F 4Y1F 4Y1F 4Y1F
sav1875-e17n 1.90 Å 4Y1G 4Y1G 4Y1G 4Y1G 4Y1G 4Y1G
sav1875-cysteinesulfonic acid 1.65 Å 4Y1R 4Y1R 4Y1R 4Y1R 4Y1R 4Y1R
Thermococcus onnurineus
ton1285, an intracellular protease from thermococcus onnurineus na1 1.78 Å 3L18 3L18 3L18 3L18 3L18 3L18
Thermococcus thioreducens
small cell H3 crystal form 1.96 Å 5TW0 5TW0 5TW0 5TW0 5TW0 5TW0
large cell H3 crystal form 1.86 Å 5TXW 5TXW 5TXW 5TXW 5TXW 5TXW