Structure for peptidase S08.001: subtilisin Carlsberg

Summary Alignment Tree Sequences Sequence features Distribution Structure Literature Substrates Pharma

 

PDB Organism Resolution Comment
1SCN Bacillus licheniformis 1.90 Å complex with N-tert-butoxycarbonyl-Ala-Pro-Phe-O-benzoyl hydroxylamine
Catalytic residues are shown in ball-and-stick representation: Asp137 in pink, His168 in purple and Ser325 in orange. N-tert-butoxycarbonyl-Ala-Pro-Phe-O-benzoyl hydroxylamine is shown in grey in ball-and-stick representation.
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TERTIARY STRUCTURE DATA
Comment Resolution PDB PDBe SCOP CATH PDBSum Proteopedia Reference
Bacillus licheniformis
complex with barley chymotrypsin inhibitor CI-2A(M59P): OBSOLETE ENTRY 1.80 Å 1A10 1A10 1A10 1A10 1A10 1A10
complex with chymotrypsin inhibitor CI-2A: OBSOLETE ENTRY 1.05 Å 1A1Y 1A1Y 1A1Y 1A1Y 1A1Y 1A1Y
mature  peptidase 2.60 Å 1AF4 1AF4 1AF4 1AF4 1AF4 1AF4 Schmitke et al., 1997
complex with L-naphthyl-1-acetamido boronic acid inhibitor 2.60 Å 1AV7 1AV7 1AV7 1AV7 1AV7 1AV7 Stoll et al., 1998
complex with D-para-chlorophenyl-1-acetamido boronic acid inhibitor 2.00 Å 1AVT 1AVT 1AVT 1AVT 1AVT 1AVT Stoll et al., 1998
trans-cinnamoyl-subtilisin in andhydrous acetonitrile 2.15 Å 1BE6 1BE6 1BE6 1BE6 1BE6 1BE6 Schmitke et al., 1998
trans-cinnamoyl-subtilisin in water 2.20 Å 1BE8 1BE8 1BE8 1BE8 1BE8 1BE8 Schmitke et al., 1998
in 40% acetonitrile 2.30 Å 1BFK 1BFK 1BFK 1BFK 1BFK 1BFK Schmitke et al., 1998
in 20% dioxane 2.20 Å 1BFU 1BFU 1BFU 1BFU 1BFU 1BFU Schmitke et al., 1998
under xenon pressure 2.16 Å 1C3L 1C3L 1C3L 1C3L 1C3L 1C3L Prange et al., 1998
NMR structure; complex with barley chymotrypsin inhibitor-2 0.00 Å 1CIS 1CIS 1CIS 1CIS 1CIS 1CIS Osmark et al., 1993
complex with eglin C 1.20 Å 1CSE 1CSE 1CSE 1CSE 1CSE 1CSE Bode et al., 1987
complex with tomato inhibitor-II 2.50 Å 1OYV 1OYV 1OYV 1OYV 1OYV 1OYV Barrette-Ng et al., 2003
complex with inhibitor turkey ovomucoid third domain 1.10 Å 1R0R 1R0R 1R0R 1R0R 1R0R 1R0R Horn et al., 2003
mature  peptidase 2.50 Å 1SBC 1SBC 1SBC 1SBC 1SBC 1SBC Neidhart & Petsko, 1988
mature  peptidase 2.00 Å 1SCA 1SCA 1SCA 1SCA 1SCA 1SCA Fitzpatrick et al., 1993
acetonitrile soaked crystals 2.30 Å 1SCB 1SCB 1SCB 1SCB 1SCB 1SCB Fitzpatrick et al., 1993
mature  peptidase 2.30 Å 1SCD 1SCD 1SCD 1SCD 1SCD 1SCD Fitzpatrick et al., 1994
complex with N-tert-butoxycarbonyl-Ala-Pro-Phe-O-benzoyl hydroxylamine 1.90 Å 1SCN 1SCN 1SCN 1SCN 1SCN 1SCN Steinmetz et al., 1994
complex with L-para-chlorophenyl-1-acetamido boronic acid inhibitor 2.10 Å 1VSB 1VSB 1VSB 1VSB 1VSB 1VSB Stoll et al., 1998
complex with turkey ovomucoid third domain 1.55 Å 1YU6 1YU6 1YU6 1YU6 1YU6 1YU6 Maynes et al., 2005
complex with N-acetyl eglin C 1.80 Å 2SEC 2SEC 2SEC 2SEC 2SEC 2SEC McPhalen & James, 1988
crystallographic analysis of counter-ion effects in acetonitrile 2.24 Å 2WUV 2WUV 2WUV 2WUV 2WUV 2WUV
crystallographic analysis of counter-ion effects in acetonitrile (native data) 2.23 Å 2WUW 2WUW 2WUW 2WUW 2WUW 2WUW
complex with horseshoe crab Kazal-type serine protease inhibitor 2.60 Å 3QTL 3QTL 3QTL 3QTL 3QTL 3QTL Shenoy et al., 2011
bond length analysis of Asp, Glu and His residues 1.26 Å 3UNX 3UNX 3UNX 3UNX 3UNX 3UNX
complex with D-naphthyl-1-acetamido boronic acid inhibitor 2.60 Å 3VSB 3VSB 3VSB 3VSB 3VSB 3VSB Stoll et al., 1998
extensive counter-ion interactions in aqueous medium, cs derivative 2.29 Å 4C3U 4C3U 4C3U 4C3U 4C3U 4C3U
extensive counter-ion interactions in aqueous medium, no cs soak 2.26 Å 4C3V 4C3V 4C3V 4C3V 4C3V 4C3V
complex with Streptomyces caespitosus sermetstatin 2.25 Å 4HX2 4HX2 4HX2 4HX2 4HX2 4HX2
subtilisin serine protease modified with the protease inhibitor cyanobenzylsulfonylfluoride 1.27 Å 6DWQ 6DWQ 6DWQ 6DWQ 6DWQ 6DWQ