Structure for peptidase T01.002: archaean proteasome, beta component

Summary Alignment Tree Sequences Sequence features Distribution Structure Literature Substrates

PDB	Organism	Resolution	Comment
1PMA_B	Thermoplasma acidophilum	3.40 Å	mature
Only one beta subunit is shown. The catalytic Thr9 is shown in ball-and-stick representation in orange.

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TERTIARY STRUCTURE DATA
Comment	Resolution	PDB	PDBe	SCOP	CATH	PDBSum	Proteopedia	Reference
Archaeoglobus fulgidus
20S proteasome complex with calpain inhibitor I	2.83 Å	1J2Q	1J2Q	1J2Q	1J2Q	1J2Q	1J2Q	Groll et al., 2003
20s core particle of pan-proteasomes	4.12 Å	6HE5	6HE5	6HE5	6HE5	6HE5	6HE5
20s proteasome	3.69 Å	6HE7	6HE7	6HE7	6HE7	6HE7	6HE7
pan-proteasome in state 1	6.86 Å	6HE8	6HE8	6HE8	6HE8	6HE8	6HE8
pan-proteasome in state 2	6.35 Å	6HE9	6HE9	6HE9	6HE9	6HE9	6HE9
pan-proteasome in state 3	7.04 Å	6HEA	6HEA	6HEA	6HEA	6HEA	6HEA
pan-proteasome in state 4	6.95 Å	6HEC	6HEC	6HEC	6HEC	6HEC	6HEC
pan-proteasome in state 5	6.95 Å	6HED	6HED	6HED	6HED	6HED	6HED
Methanocaldococcus jannaschii
proteasome 20s core particle	4.10 Å	3H4P	3H4P	3H4P	3H4P	3H4P	3H4P	Zhang et al., 2009
Thermoplasma acidophilum
mature peptidase	3.40 Å	1PMA	1PMA	1PMA	1PMA	1PMA	1PMA	Lowe et al., 1995
implications for interactions of proteasome with pan and pa700 from the 1.9 a structure of a proteasome-11s activator complex	2.30 Å	1YA7	1YA7	1YA7	1YA7	1YA7	1YA7	Forster et al., 2005
20s proteasome Asp9Ser mutant; complex with PA26	1.90 Å	1YAR	1YAR	1YAR	1YAR	1YAR	1YAR	Forster et al., 2005
20s proteasome; complex with pa26	2.40 Å	1YAU	1YAU	1YAU	1YAU	1YAU	1YAU	Forster et al., 2005
20s proteasome with an open gate	6.80 Å	3C91	3C91	3C91	3C91	3C91	3C91	Rabl et al., 2008
20s proteasome with a closed gate	6.80 Å	3C92	3C92	3C92	3C92	3C92	3C92	Rabl et al., 2008
mature peptidase	4.00 Å	3IPM	3IPM	3IPM	3IPM	3IPM	3IPM	Yu et al., 2010
mature peptidase	3.30 Å	3J9I	3J9I	3J9I	3J9I	3J9I	3J9I	Li et al., 2013
mature peptidase	2.90 Å	3JRM	3JRM	3JRM	3JRM	3JRM	3JRM	Stadtmueller et al., 2010
mature peptidase	2.90 Å	3JSE	3JSE	3JSE	3JSE	3JSE	3JSE	Stadtmueller et al., 2010
mature peptidase	3.20 Å	3JTL	3JTL	3JTL	3JTL	3JTL	3JTL	Stadtmueller et al., 2010
thermoplasma acidophilum 20s proteasome using 200kev with stage position	3.10 Å	5VY3	5VY3	5VY3	5VY3	5VY3	5VY3
thermoplasma acidophilum 20s proteasome using 200kev with image shift	3.30 Å	5VY4	5VY4	5VY4	5VY4	5VY4	5VY4
20s proteasome using cryo-electron microscopy	2.80 Å	6BDF	6BDF	6BDF	6BDF	6BDF	6BDF