Structure for peptidase M24.007: Xaa-Pro dipeptidase (eukaryote-type)
 
| PDB | Organism | Resolution | Comment |
|---|---|---|---|
| 2OKN_A | Homo sapiens | 2.45 Å | mature |
| The catalytic manganese ions are shown as grey CPK spheres. The manganese ligands are shown in ball-and-stick representation: Asp276 and Asp287 in pink, Glu412 and Glu452 in blue and His370 in purple. The catalytic residues are shown in ball-and-stick representation: His255, His366 and His377 in purple. | |||
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| TERTIARY STRUCTURE DATA | ||||||||
|---|---|---|---|---|---|---|---|---|
| Comment | Resolution | PDB | PDBe | SCOP | CATH | PDBSum | Proteopedia | Reference |
| Homo sapiens | ||||||||
| mature peptidase | 1.82 Å | 2IW2 | 2IW2 | 2IW2 | 2IW2 | 2IW2 | 2IW2 | |
| mature peptidase | 2.45 Å | 2OKN | 2OKN | 2OKN | 2OKN | 2OKN | 2OKN | |
| crystal structure of wild-type human prolidase with mn ions | 1.48 Å | 5M4G | 5M4G | 5M4G | 5M4G | 5M4G | 5M4G | |
| crystal structure of wild-type human prolidase with glypro ligand | 1.55 Å | 5M4J | 5M4J | 5M4J | 5M4J | 5M4J | 5M4J | |
| crystal structure of wild-type human prolidase with mg ions and leuproligand | 1.49 Å | 5M4L | 5M4L | 5M4L | 5M4L | 5M4L | 5M4L | |
| crystal structure of wild-type human prolidase with mn ions and pro ligand | 1.73 Å | 5M4Q | 5M4Q | 5M4Q | 5M4Q | 5M4Q | 5M4Q | |
| crystal structure of asp276asn mutant of human prolidase with mn ions and glypro ligand | 1.43 Å | 5MC1 | 5MC1 | 5MC1 | 5MC1 | 5MC1 | 5MC1 | |
| Gly278Asp mutant with Mn ions and glypro ligand | 1.70 Å | 5MC2 | 5MC2 | 5MC2 | 5MC2 | 5MC2 | 5MC2 | |
| Glu412Lys mutant with Mn ions and glypro ligand | 1.52 Å | 5MC3 | 5MC3 | 5MC3 | 5MC3 | 5MC3 | 5MC3 | |
| Gly448Arg mutant with Mn ions and glypro ligand | 1.80 Å | 5MC4 | 5MC4 | 5MC4 | 5MC4 | 5MC4 | 5MC4 | |
| crystal structure of delglu452 mutant of human prolidase with mn ions and glypro ligand | 1.90 Å | 5MC5 | 5MC5 | 5MC5 | 5MC5 | 5MC5 | 5MC5 | |
| crystal structure of arg184gln mutant of human prolidase with mn ions and cacodylate ligand | 1.48 Å | 6H2P | 6H2P | 6H2P | 6H2P | 6H2P | 6H2P | |
| crystal structure of arg184gln mutant of human prolidase with mn ions and leupro ligand | 1.78 Å | 6H2Q | 6H2Q | 6H2Q | 6H2Q | 6H2Q | 6H2Q | |


