Structure for peptidase S46.002: dipeptidyl-peptidase 11 (Porphyromonas gingivalis-type)

Summary Alignment Tree Sequences Sequence features Distribution Structure Literature Substrates

 

TERTIARY STRUCTURE DATA
Comment Resolution PDB PDBe SCOP CATH PDBSum Proteopedia Reference
Flavobacterium psychrophilum
complex with dipeptide Arg-Asp 2.10 Å 5JXF 5JXF 5JXF 5JXF 5JXF 5JXF
Porphyromonas endodontalis
complex with dipeptide Arg-Asp 2.20 Å 5JWG 5JWG 5JWG 5JWG 5JWG 5JWG
complex with dipeptide Arg-Glu 2.10 Å 5JWI 5JWI 5JWI 5JWI 5JWI 5JWI
crystal structure of porphyromonas endodontalis dpp11 2.85 Å 5JXK 5JXK 5JXK 5JXK 5JXK 5JXK
crystal structure of porphyromonas endodontalis dpp11 in alternate conformation 2.50 Å 5JXP 5JXP 5JXP 5JXP 5JXP 5JXP
complex with substrate 2.60 Å 5JY0 5JY0 5JY0 5JY0 5JY0 5JY0
Porphyromonas gingivalis
mature  peptidase 2.70 Å 4XZY 4XZY 4XZY 4XZY 4XZY 4XZY Sakamoto et al., 2015
mature  peptidase 2.46 Å 4Y01 4Y01 4Y01 4Y01 4Y01 4Y01 Sakamoto et al., 2015
mature  peptidase 1.96 Å 4Y02 4Y02 4Y02 4Y02 4Y02 4Y02 Sakamoto et al., 2015
mature  peptidase 1.66 Å 4Y04 4Y04 4Y04 4Y04 4Y04 4Y04 Sakamoto et al., 2015
crystal structure of porphyromonas gingivalis dpp11 2.40 Å 5JWF 5JWF 5JWF 5JWF 5JWF 5JWF