Merops Switch to
Inhibitors

Peptidase

Family Clan SEARCHES BLAST
MEROPS SUBMISSIONS

Other
information

Substrates for peptidase S01.010: granzyme B (Homo sapiens-type)

Summary Gene structure Alignment Tree Sequences Sequence features Distribution Structure Literature Substrates Pharma

Peptide and protein substrates that are thought to be physiologically relevant are indicated by P. Peptide and protein substrates that are thought to be pathologically relevant are indicated by D. Peptide and protein substrates that are not physiologically relevant are indicated by N. Synthetic substrates are indicated by S. Click on the symbol to show only physiological, non-physiological or synthetic substrates, or here to display all substrates. How cleavage sites have been identified are indicated by the following evidence codes: NT = N-terminal sequencing, MS = mass spectroscopy, MU = mutation, CS = consensus sequence, LC = liquid chromatography. To see all annotated cleavages for a protein substrate, click on the UniProt Accession.

Substrate Uniprot Residue range Cleavage Site Cleavage type Evidence P4 P3 P2 P1 P1' P2' P3' P4' Reference CutDB MERNUM
1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2 P16885 1-1265 Peptide-Asp8+Ser-Peptide N MS Val Asn Val Asp Ser Leu Ala Glu Van Damme et al., 2010
116 kDa U5 small nuclear ribonucleoprotein component O08810 1-971 peptide-Asp18+Ser-peptide N MS Pro Glu Leu Asp Ser Asp Glu Asp Van Damme et al., 2009 25704
116 kDa U5 small nuclear ribonucleoprotein component O08810 1-971 peptide-Glu16+Leu-peptide P MS Ile Gly Pro Glu Leu Asp Ser Asp Van Damme et al., 2009
116 kDa U5 small nuclear ribonucleoprotein component Q15029 1-972 peptide-Asp169+Ile-peptide P MS Cys Tyr Thr Asp Ile Leu Phe Thr Van Damme et al., 2009
13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030408F17 product:BMS1-like, ribosome assembly prote Q3UYW7 1-830 peptide-Asp802+Thr-peptide N MS Pro Gly Pro Asp Thr Gln Ser Glu Van Damme et al., 2009 25707
14 kDa phosphohistidine phosphatase Q9NRX4 1-125 Peptide-Asp63+Met-Peptide N MS Val Ser Gly Asp Met Gln Lys Gln Van Damme et al., 2010
14-3-3 protein epsilon P62258 1-255 peptide-Asp238+Gly-peptide P MS Met Gln Gly Asp Gly Glu Glu Gln Van Damme et al., 2009
17 days embryo stomach cDNA, RIKEN full-length enriched library, clone:I920024M16 product:Hypothetical ribosomal protein L1 cont Q3TH37 1-452 peptide-Asp20+Val-peptide N MS Thr Thr Thr Asp Val Gln Val Thr Van Damme et al., 2009 25714
2',3'-cyclic-nucleotide 3'-phosphodiesterase P09543 1-421 Peptide-Asp84+Ala-Peptide N MS Val Ser Ala Asp Ala Tyr Lys Ile Van Damme et al., 2010 27203
26S protease regulatory subunit 10B P62333 2-389 Peptide-Glu381+Ser-Peptide N MS Lys Lys Leu Glu Ser Lys Leu Asp Van Damme et al., 2010
26S protease regulatory subunit 6A P17980 1-439 Peptide-Asp378+Val-Peptide N MS Val Ser Pro Asp Val Asn Tyr Glu Van Damme et al., 2010
26S protease regulatory subunit 6B P43686 1-418 Peptide-Asp166+Ile-Peptide N MS Met Tyr Ala Asp Ile Gly Gly Met Van Damme et al., 2010
26S protease regulatory subunit 7 P35998 2-433 peptide-Asp83+Lys-peptide P MS Leu Ala Ala Asp Lys Gln Thr Leu Van Damme et al., 2009
26S proteasome non-ATPase regulatory subunit 12 Q9D8W5 2-456 peptide-Asp19+Tyr-peptide N MS Met Glu Val Asp Tyr Ser Ala Thr Van Damme et al., 2009 25715
26S proteasome non-ATPase regulatory subunit 12 O00232 2-456 Peptide-Asp19+Tyr-Peptide N MS Met Glu Val Asp Tyr Ser Ala Thr Van Damme et al., 2010
28 kDa heat- and acid-stable phosphoprotein Q3UHX2 1-181 peptide-Asp61+Glu-peptide N MS Leu Asp Ser Asp Glu Ser Glu Asp Van Damme et al., 2009 25716
28 kDa heat- and acid-stable phosphoprotein Q13442 1-181 peptide-Asp61+Glu-peptide P MS Leu Asp Ser Asp Glu Ser Glu Asp Van Damme et al., 2009
4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430318L23 product:splicing factor, arginine/serine- Q3USH5 1-845 peptide-Asp156+Tyr-peptide N MS Tyr Gly Ser Asp Tyr Tyr Asp Pro Van Damme et al., 2009 25718
40S ribosomal protein S11 P62280 2-158 Peptide-Glu27+Thr-Peptide N MS Leu Leu Gly Glu Thr Gly Lys Glu Plasman et al., 2011
40S ribosomal protein S11 P62281 2-158 peptide-Glu27+Thr-peptide P MS Leu Leu Gly Glu Thr Gly Lys Glu Van Damme et al., 2009
40S ribosomal protein S13 P62277 2-151 peptide-Asp31+Asp-peptide P MS Leu Thr Ser Asp Asp Val Lys Glu Van Damme et al., 2009
40S ribosomal protein S14 P62263 2-151 Peptide-Asp65+Arg-Peptide N MS Val Lys Ala Asp Arg Asp Glu Ser Van Damme et al., 2010
40S ribosomal protein S15 P62843 2-145 peptide-Asp23+Gln-peptide N MS Val Asp Leu Asp Gln Leu Leu Asp Van Damme et al., 2009 25719
40S ribosomal protein S15 P62841 2-145 peptide-Asp27+Met-peptide P MS Gln Leu Leu Asp Met Ser Tyr Glu Van Damme et al., 2009 25720
40S ribosomal protein S15 P62841 2-145 Peptide-Asp23+Gln-Peptide N MS Val Asp Leu Asp Gln Leu Leu Asp Van Damme et al., 2010
40S ribosomal protein S15 P62841 2-145 Peptide-Glu31+Gln-Peptide N MS Met Ser Tyr Glu Gln Leu Met Gln Plasman et al., 2011
40S ribosomal protein S15 P62843 2-145 peptide-Asp27+Met-peptide P MS Gln Leu Leu Asp Met Ser Tyr Glu Van Damme et al., 2009
40S ribosomal protein S15 P62843 2-145 peptide-Glu31+Gln-peptide P MS Met Ser Tyr Glu Gln Leu Met Gln Van Damme et al., 2009
40S ribosomal protein S15a P62245 2-130 peptide-Asp9+Ala-peptide N MS Val Leu Ala Asp Ala Leu Lys Ser Van Damme et al., 2009 22262
40S ribosomal protein S15a P62244 2-130 peptide-Asp9+Ala-peptide P MS Val Leu Ala Asp Ala Leu Lys Ser Van Damme et al., 2009
40S ribosomal protein S17 P08708 2-135 Peptide-Leu91+Asp-Peptide N MS Val Ser Ala Leu Asp Gln Glu Ile Van Damme et al., 2010
40S ribosomal protein S17 P08708 2-135 Peptide-Asp92+Gln-Peptide N MS Ser Ala Leu Asp Gln Glu Ile Ile Van Damme et al., 2010
40S ribosomal protein S17 P63276 2-135 peptide-Glu37+Ile-peptide P MS Val Cys Glu Glu Ile Ala Ile Ile Van Damme et al., 2009
40S ribosomal protein S17-like P0CW22 1-135 peptide-Leu91+Asp-peptide P MS Val Ser Ala Leu Asp Gln Glu Ile Van Damme et al., 2009
40S ribosomal protein S17-like P0CW22 1-135 peptide-Asp92+Gln-peptide P MS Ser Ala Leu Asp Gln Glu Ile Ile Van Damme et al., 2009
40S ribosomal protein S2 P15880 1-293 peptide-Pro265+Tyr-peptide P MS Thr Lys Ser Pro Tyr Gln Glu Phe Van Damme et al., 2009
40S ribosomal protein S20 P60866 2-119 Peptide-Asp38+Leu-Peptide N MS Val Cys Ala Asp Leu Ile Arg Gly Van Damme et al., 2010
40S ribosomal protein S21 Q9CQR2 1-83 peptide-Asp4+Ala-peptide N MS - Gln Asn Asp Ala Gly Glu Phe Van Damme et al., 2009
40S ribosomal protein S23 P62267 2-143 peptide-Glu58+Ala-peptide P MS Val Gly Val Glu Ala Lys Gln Pro Van Damme et al., 2009
40S ribosomal protein S26 P62854 2-115 peptide-Arg42+Asn-peptide P MS Phe Val Ile Arg Asn Ile Val Glu Van Damme et al., 2009
40S ribosomal protein S3 P23396 2-243 Peptide-Asp32+Gly-Peptide N MS Leu Ala Glu Asp Gly Tyr Ser Gly Van Damme et al., 2010
40S ribosomal protein S3a P97351 2-264 peptide-Asp73+Leu-peptide N MS Ser Leu Ala Asp Leu Gln Asn Asp Van Damme et al., 2009 22263
40S ribosomal protein S3a P61247 2-264 Peptide-Trp30+Tyr-Peptide N MS Lys Lys Asp Trp Tyr Asp Val Lys Van Damme et al., 2010
40S ribosomal protein S3a P61247 2-264 Peptide-Asp60+Gly-Peptide N MS Ile Ala Ser Asp Gly Leu Lys Gly Van Damme et al., 2010
40S ribosomal protein S3a P61247 2-264 Peptide-Glu262+Ser-Val N MS Pro Val Gln Glu Ser Val - - Van Damme et al., 2010
40S ribosomal protein S3a P61247 2-264 peptide-Lys18+Lys-peptide P MS Lys Gly Ala Lys Lys Lys Val Val Van Damme et al., 2009
40S ribosomal protein S3a P61247 2-264 peptide-Asp73+Leu-peptide P MS Ser Leu Ala Asp Leu Gln Asn Asp Van Damme et al., 2009
40S ribosomal protein S4, X isoform P62702 2-263 peptide-Asp21+Lys-peptide N MS Trp Met Leu Asp Lys Leu Thr Gly Van Damme et al., 2009 22264
40S ribosomal protein S4, X isoform P62702 2-263 peptide-Asp176+Thr-peptide N MS Ile Lys Phe Asp Thr Gly Asn Leu Van Damme et al., 2009 25722
40S ribosomal protein S4, X isoform P62701 1-263 peptide-Asp21+Lys-peptide P MS Trp Met Leu Asp Lys Leu Thr Gly Van Damme et al., 2009
40S ribosomal protein S4, X isoform P62701 2-263 Peptide-Glu117+Glu-Peptide N MS Ile Thr Pro Glu Glu Ala Lys Tyr Plasman et al., 2011
40S ribosomal protein S4, Y isoform 1 P22090 1-263 peptide-Asp21+Lys-peptide P MS Trp Met Leu Asp Lys Leu Thr Gly Van Damme et al., 2009
40S ribosomal protein S4, Y isoform 1 P22090 1-263 peptide-Glu117+Glu-peptide P MS Ile Thr Val Glu Glu Ala Lys Tyr Van Damme et al., 2009
40S ribosomal protein S4, Y isoform 2 Q8TD47 1-263 peptide-Asp21+Lys-peptide P MS Trp Met Leu Asp Lys Leu Thr Gly Van Damme et al., 2009
40S ribosomal protein S4, Y isoform 2 Q8TD47 1-263 peptide-Glu117+Glu-peptide P MS Ile Thr Val Glu Glu Ala Lys Tyr Van Damme et al., 2009
40S ribosomal protein S6 P62753 1-249 Peptide-Gly11+Cys-Peptide N MS Pro Ala Thr Gly Cys Gln Lys Leu Van Damme et al., 2010
40S ribosomal protein S6 P62753 1-249 peptide-Asn105+Leu-peptide P MS Val Asp Ala Asn Leu Ser Val Leu Van Damme et al., 2009
40S ribosomal protein S7 P62082 1-194 peptide-Asp127+Ala-peptide N MS Ala Val His Asp Ala Ile Leu Glu Van Damme et al., 2009 22265
40S ribosomal protein S7 P62082 1-194 peptide-Asp132+Leu-peptide N MS Ile Leu Glu Asp Leu Val Phe Pro Van Damme et al., 2009 25723
40S ribosomal protein S7 P62081 1-194 peptide-Asn33+Ser-peptide P MS Leu Glu Met Asn Ser Asp Leu Lys Van Damme et al., 2009
40S ribosomal protein S7 P62081 1-194 peptide-Asp127+Ala-peptide P MS Ala Val His Asp Ala Ile Leu Glu Van Damme et al., 2009
40S ribosomal protein S8 P62241 2-208 peptide-Glu132+Glu-peptide P MS Leu Thr Pro Glu Glu Glu Glu Ile Van Damme et al., 2009
40S ribosomal protein S8 P62242 2-208 peptide-Glu132+Glu-peptide P MS Leu Thr Pro Glu Glu Glu Glu Ile Van Damme et al., 2009
45 kDa calcium-binding protein Q9BRK5 37-362 Peptide-Asn293+His-Peptide N MS Ile Asp Ser Asn His Asp Gly Ile Van Damme et al., 2010
5'-3' exoribonuclease 2 Q9H0D6 1-950 Peptide-Asn477+Thr-Peptide N MS Ile Ser Pro Asn Thr Ser Phe Thr Van Damme et al., 2010
5-azacytidine-induced protein 1 Q9UPN4 1-1083 Peptide-Met911+Ala-Peptide N MS Glu Ala Asp Met Ala Leu Ala Lys Van Damme et al., 2010
5-azacytidine-induced protein 1 Q9UPN4 1-1083 Peptide-Asp439+Asn-Peptide N MS Ala Ala Gly Asp Asn Leu Glu Met Van Damme et al., 2010
5-hydroxytryptamine receptor 3B O95264 22-441 Peptide-Asp204+Ser-Peptide P CS Phe Leu Asn Asp Ser Glu Trp Glu Gahring et al., 2001
6-phosphofructokinase type C Q9WUA3 1-784 peptide-Asp365+Val-peptide N MS Met Thr Gln Asp Val Gln Lys Ala Van Damme et al., 2009 25729
6-phosphofructokinase type C Q01813 1-784 Peptide-Asp553+Thr-Peptide N MS Ile Gly Ala Asp Thr Ala Leu Asn Van Damme et al., 2010
6-phosphofructokinase type C Q01813 1-784 Peptide-Asp601+Ala-Peptide N MS Ala Gly Ala Asp Ala Ala Tyr Ile Van Damme et al., 2010
6-phosphofructokinase type C Q01813 1-784 peptide-Asp128+Gly-peptide P MS Ile Gly Gly Asp Gly Ser Leu Thr Van Damme et al., 2009
6-phosphofructokinase type C Q01813 1-784 peptide-Leu556+Asn-peptide P MS Asp Thr Ala Leu Asn Thr Ile Thr Van Damme et al., 2009
6-phosphofructokinase type C Q01813 1-784 peptide-Asp714+Asp-peptide P MS Phe Thr Thr Asp Asp Ser Ile Cys Van Damme et al., 2009
6-phosphofructokinase type C Q9WUA3 1-784 peptide-Asp34+Ala-peptide P MS Ser Gly Gly Asp Ala Gln Gly Met Van Damme et al., 2009
6-phosphofructokinase type C Q9WUA3 1-784 peptide-Asp552+Thr-peptide P MS Ile Gly Ala Asp Thr Ala Leu Asn Van Damme et al., 2009
6-phosphofructokinase, liver type P12382 2-780 peptide-Asp26+Ala-peptide N MS Ser Gly Gly Asp Ala Gln Gly Met Van Damme et al., 2009 25730
6-phosphofructokinase, liver type P17858 2-780 peptide-Asp542+Thr-peptide P MS Leu Gly Ser Asp Thr Ala Val Asn Van Damme et al., 2009 22224
6-phosphofructokinase, liver type P12382 2-780 peptide-Asp542+Thr-peptide P MS Leu Gly Ser Asp Thr Ala Val Asn Van Damme et al., 2009
6-phosphofructokinase, liver type P17858 2-780 peptide-Asp119+Gly-peptide P MS Ile Gly Gly Asp Gly Ser Leu Thr Van Damme et al., 2009
6-phosphofructokinase, muscle type P47857 2-780 peptide-Asp543+Thr-peptide N MS Ile Gly Ala Asp Thr Ala Leu Asn Van Damme et al., 2009 27219
6-phosphofructokinase, muscle type P08237 2-780 peptide-Asp543+Thr-peptide P MS Val Gly Ala Asp Thr Ala Leu Asn Van Damme et al., 2009 22222
6-phosphofructokinase, muscle type P47857 2-780 peptide-Asp591+Ala-peptide N MS Ala Gly Ala Asp Ala Ala Tyr Ile Van Damme et al., 2009 27218
6-phosphofructokinase, muscle type P08237 2-780 Peptide-Asp119+Gly-Peptide N MS Ile Gly Gly Asp Gly Ser Leu Thr Van Damme et al., 2010
6-phosphofructokinase, muscle type P47857 2-780 peptide-Asp26+Ala-peptide P MS Ser Gly Gly Asp Ala Gln Gly Met Van Damme et al., 2009
60 kDa heat shock protein, mitochondrial P10809 27-573 Peptide-Asn177+Gly-Peptide N MS Ile Ser Ala Asn Gly Asp Lys Glu Van Damme et al., 2010
60 kDa heat shock protein, mitochondrial P10809 27-573 Peptide-Asp504+Ala-Peptide N MS Val Gly Tyr Asp Ala Met Ala Gly Van Damme et al., 2010
60 kDa heat shock protein, mitochondrial P10809 27-573 Peptide-Asp277+Val-Peptide N MS Ile Ala Glu Asp Val Asp Gly Glu Plasman et al., 2011
60S acidic ribosomal protein P0 P05388 1-317 peptide-Asp33+Asn-peptide P MS Val Gly Ala Asp Asn Val Gly Ser Van Damme et al., 2009
60S acidic ribosomal protein P0 P05388 1-317 peptide-Asp256+Tyr-peptide P MS Val Glu Thr Asp Tyr Thr Phe Pro Van Damme et al., 2009
60S acidic ribosomal protein P0-like Q8NHW5 1-317 Peptide-Arg48+Gly-Peptide N MS Met Ser Leu Arg Gly Lys Val Val Van Damme et al., 2010
60S acidic ribosomal protein P0-like Q8NHW5 1-317 peptide-Asp33+Asn-peptide P MS Val Gly Ala Asp Asn Val Gly Ser Van Damme et al., 2009
60S acidic ribosomal protein P0-like Q8NHW5 1-317 peptide-Asp256+Tyr-peptide P MS Val Glu Thr Asp Tyr Thr Phe Pro Van Damme et al., 2009
60S ribosomal export protein NMD3 Q8BM61 1-503 peptide-Asp441+Phe-peptide N MS Gln Tyr Gln Asp Phe Leu Glu Asp Van Damme et al., 2009 25706
60S ribosomal export protein NMD3 Q99L48 1-503 peptide-Asp441+Phe-peptide P MS Gln Tyr Gln Asp Phe Leu Glu Asp Van Damme et al., 2009
60S ribosomal protein L10 Q6ZWV3 2-214 peptide-Asp55+Glu-peptide N MS Met Val Ser Asp Glu Tyr Glu Gln Van Damme et al., 2009 22254
60S ribosomal protein L10 P27635 2-214 peptide-Asp179+Glu-peptide P MS Phe Asn Ala Asp Glu Phe Glu Asp Van Damme et al., 2009 22255
60S ribosomal protein L10 P27635 2-214 Peptide-Glu180+Phe-Peptide N MS Asn Ala Asp Glu Phe Glu Asp Met Van Damme et al., 2010
60S ribosomal protein L10 P27635 2-214 peptide-Asp55+Glu-peptide P MS Met Val Ser Asp Glu Tyr Glu Gln Van Damme et al., 2009
60S ribosomal protein L10 Q6ZWV3 2-214 peptide-Asp179+Glu-peptide P MS Phe Asn Ala Asp Glu Phe Glu Asp Van Damme et al., 2009
60S ribosomal protein L10-like P86048 1-214 peptide-Asp55+Glu-peptide P MS Met Val Ser Asp Glu Tyr Glu Gln Van Damme et al., 2009
60S ribosomal protein L10-like Q96L21 1-214 peptide-Asp55+Glu-peptide P MS Met Val Ser Asp Glu Tyr Glu Gln Van Damme et al., 2009
60S ribosomal protein L10a P62906 2-217 Peptide-Asp8+Thr-Peptide N MS Val Ser Arg Asp Thr Leu Tyr Glu Van Damme et al., 2010
60S ribosomal protein L10a P62906 2-217 Peptide-Glu114+Ser-Peptide N MS Leu Ala Ser Glu Ser Leu Ile Lys Van Damme et al., 2010
60S ribosomal protein L11 Q9CXW4 2-178 peptide-Asp4+Gln-peptide N MS - - Gln Asp Gln Gly Glu Lys Van Damme et al., 2009
60S ribosomal protein L13 P47963 2-211 peptide-Asp138+Ser-peptide N MS Lys Lys Gly Asp Ser Ser Ala Glu Van Damme et al., 2009 22256
60S ribosomal protein L13 P26373 1-211 peptide-Asp138+Ser-peptide P MS Lys Lys Gly Asp Ser Ser Ala Glu Van Damme et al., 2009
60S ribosomal protein L13 P26373 1-211 peptide-Asp206+Val-peptide P MS Ala Glu Gln Asp Val Glu Lys Lys Van Damme et al., 2009
60S ribosomal protein L13 P47963 1-211 peptide-Glu142+Glu-peptide P MS Ser Ser Ala Glu Glu Leu Lys Leu Van Damme et al., 2009
60S ribosomal protein L13a P40429 2-203 peptide-Ala122+Ala-peptide P MS Val Val Pro Ala Ala Leu Lys Val Van Damme et al., 2009
60S ribosomal protein L14 P50914 2-215 Peptide-Asp108+Arg-Peptide N MS Thr Asp Phe Asp Arg Phe Lys Val Van Damme et al., 2010
60S ribosomal protein L17 P18621 2-184 Peptide-Asp110+Ser-Peptide N MS Leu Asp Val Asp Ser Leu Val Ile Van Damme et al., 2010
60S ribosomal protein L18 P35980 2-188 peptide-Asp124+Gln-peptide N MS Leu Thr Phe Asp Gln Leu Ala Leu Van Damme et al., 2009 25724
60S ribosomal protein L18 Q07020 2-188 peptide-Asp124+Gln-peptide P MS Leu Thr Phe Asp Gln Leu Ala Leu Van Damme et al., 2009
60S ribosomal protein L19 P84098 1-196 Peptide-Asn27+Glu-Peptide N MS Leu Asp Pro Asn Glu Thr Asn Glu Plasman et al., 2011
60S ribosomal protein L22 P35268 2-128 peptide-Asp120+Glu-peptide P MS Ile Asn Gln Asp Glu Glu Glu Glu Van Damme et al., 2009
60S ribosomal protein L23 P62829 1-140 peptide-Asp59+Met-peptide P MS Gly Val Gly Asp Met Val Met Ala Van Damme et al., 2009
60S ribosomal protein L24 P83731 1-157 peptide-Cys6+Ser-peptide P MS Val Glu Leu Cys Ser Phe Ser Gly Van Damme et al., 2009
60S ribosomal protein L24 Q8BP67 1-157 peptide-Glu37+Ser-peptide P MS Ala Lys Cys Glu Ser Ala Phe Leu Van Damme et al., 2009
60S ribosomal protein L26 P61255 1-145 peptide-Asp52+Asp-peptide N MS Ile Arg Lys Asp Asp Glu Val Gln Van Damme et al., 2009 25725
60S ribosomal protein L26 P61254 1-145 peptide-Asp52+Asp-peptide P MS Ile Arg Lys Asp Asp Glu Val Gln Van Damme et al., 2009
60S ribosomal protein L26-like 1 Q9UNX3 1-145 peptide-Asp52+Asp-peptide P MS Ile Arg Lys Asp Asp Glu Val Gln Van Damme et al., 2009
60S ribosomal protein L28 P41105 2-137 peptide-Asp56+Gly-peptide N MS Pro Ala Ala Asp Gly Lys Gly Val Van Damme et al., 2009 22257
60S ribosomal protein L28 P46779 2-137 peptide-Asp56+Gly-peptide P MS Pro Ala Ala Asp Gly Lys Gly Val Van Damme et al., 2009
60S ribosomal protein L29 P47914 2-159 Peptide-Leu32+Lys-Peptide N MS Tyr Glu Ser Leu Lys Gly Val Asp Van Damme et al., 2010
60S ribosomal protein L3 P27659 2-403 peptide-Asp214+Glu-peptide N MS Phe Gly Gln Asp Glu Met Ile Asp Van Damme et al., 2009 25726
60S ribosomal protein L3 P27659 2-403 peptide-Asp218+Val-peptide N MS Glu Met Ile Asp Val Ile Gly Val Van Damme et al., 2009 25727
60S ribosomal protein L3 P39023 2-403 peptide-Asp214+Glu-peptide P MS Phe Gly Gln Asp Glu Met Ile Asp Van Damme et al., 2009
60S ribosomal protein L35 Q6ZWV7 2-123 peptide-Asp22+Asp-peptide N MS Lys Gln Leu Asp Asp Leu Lys Val Van Damme et al., 2009 25694
60S ribosomal protein L4 Q9D8E6 2-419 peptide-Asp214+Asn-peptide N MS Tyr Asn Glu Asp Asn Gly Ile Ile Van Damme et al., 2009 22258
60S ribosomal protein L4 P36578 2-427 peptide-Asp35+Ile-peptide P MS Ile Arg Pro Asp Ile Val Asn Phe Van Damme et al., 2009
60S ribosomal protein L4 P36578 2-427 peptide-Asp214+Asn-peptide P MS Tyr Asn Glu Asp Asn Gly Ile Ile Van Damme et al., 2009
60S ribosomal protein L5 P46777 1-297 peptide-Asp128+Glu-peptide P MS Val Thr Gly Asp Glu Tyr Asn Val Van Damme et al., 2009 27216
60S ribosomal protein L5 P46777 1-297 peptide-Asp40+Lys-peptide P MS Val Ile Gln Asp Lys Asn Lys Tyr Van Damme et al., 2009 27215
60S ribosomal protein L6 P47911 2-296 peptide-Asp242+Thr-peptide N MS Glu Ile Phe Asp Thr Glu Lys Glu Van Damme et al., 2009 25728
60S ribosomal protein L7 P14148 1-270 peptide-Glu38+Thr-peptide P MS Ala Val Pro Glu Thr Leu Lys Lys Van Damme et al., 2009
60S ribosomal protein L7 P18124 1-248 peptide-Glu16+Thr-peptide P MS Ala Val Pro Glu Thr Leu Lys Lys Van Damme et al., 2009
60S ribosomal protein L9 P32969 1-192 Peptide-Glu183+Lys-Peptide N MS Tyr Val Ser Glu Lys Gly Thr Val Van Damme et al., 2010
60S ribosomal protein L9 P51410 1-192 peptide-Glu44+Leu-peptide P MS Ile Asn Val Glu Leu Ser Leu Leu Van Damme et al., 2009
A-kinase anchor protein 8 Q9DBR0 1-687 peptide-Asp319+Ser-peptide N MS Ala Arg Ala Asp Ser Asp Gly Asp Van Damme et al., 2009 25739
A-kinase anchor protein 8 Q9DBR0 1-687 peptide-Asp321+Gly-peptide N MS Ala Asp Ser Asp Gly Asp Leu Ser Van Damme et al., 2009 25740
A-kinase anchor protein 8 O43823 1-692 Peptide-Asp576+Val-Peptide N MS Val Ala Ala Asp Val Leu Ala Glu Van Damme et al., 2010
A-kinase anchor protein 8-like Q9ULX6 1-646 Peptide-Asp108+Met-Peptide N MS Leu Glu Thr Asp Met Met Gln Gly Van Damme et al., 2010
Absent in melanoma 1 protein Q9Y4K1 1-1723 peptide-Asn47+Ala-peptide P MS Val Ala Pro Asn Ala Ala Ser Asp Van Damme et al., 2009
Acetyl-CoA acetyltransferase, mitochondrial P24752 34-427 Peptide-Asp212+Ala-Peptide N MS Asn Glu Gln Asp Ala Tyr Ala Ile Van Damme et al., 2010
acetyl-CoA carboxylase 1 Q5SWU9 1-2345 peptide-Asp1218+Val-peptide N MS Ser Val Ser Asp Val Leu Leu Asp Van Damme et al., 2009 25732
Acetyl-CoA carboxylase 1 Q13085 1-2346 peptide-Leu36+Val-peptide P MS Ile Ser Asn Leu Val Lys Leu Asp Van Damme et al., 2009
acidic leucine-rich nuclear phosphoprotein 32 family member A O35381 1-247 peptide-Asp218+Asp-peptide N MS Gly Glu Val Asp Asp Glu Glu Asp Van Damme et al., 2009 22199
Acidic leucine-rich nuclear phosphoprotein 32 family member A O35381 1-247 peptide-Glu216+Val-peptide P MS Asn Asp Gly Glu Val Asp Asp Glu Van Damme et al., 2009
Acidic leucine-rich nuclear phosphoprotein 32 family member A O35381 1-247 peptide-Glu220+Glu-peptide P MS Val Asp Asp Glu Glu Asp Glu Glu Van Damme et al., 2009
Acidic leucine-rich nuclear phosphoprotein 32 family member A P39687 1-249 peptide-Glu206+Glu-peptide P MS Val Ser Gly Glu Glu Glu Glu Asp Van Damme et al., 2009
Acidic leucine-rich nuclear phosphoprotein 32 family member A P39687 1-249 peptide-Glu218+Val-peptide P MS Asn Asp Gly Glu Val Asp Asp Glu Van Damme et al., 2009
Acidic leucine-rich nuclear phosphoprotein 32 family member A P39687 1-249 peptide-Asp220+Asp-peptide P MS Gly Glu Val Asp Asp Glu Glu Asp Van Damme et al., 2009
acidic leucine-rich nuclear phosphoprotein 32 family member B Q9EST5 1-272 peptide-Asp240+Glu-peptide N MS Val Asp Glu Asp Glu Glu Asp Glu Van Damme et al., 2009
acidic leucine-rich nuclear phosphoprotein 32 family member B Q92688 1-251 peptide-Asp222+Glu-peptide P MS Asp Glu Glu Asp Glu Asp Glu Asp Van Damme et al., 2009 22200
acidic leucine-rich nuclear phosphoprotein 32 family member B Q9EST5 1-272 peptide-Asp243+Glu-peptide N MS Asp Glu Glu Asp Glu Asp Glu Asp Van Damme et al., 2009
Acidic leucine-rich nuclear phosphoprotein 32 family member B Q92688 1-251 Peptide-Asp219+Glu-Peptide N MS Phe Gly Leu Asp Glu Glu Asp Glu Van Damme et al., 2010
Acidic leucine-rich nuclear phosphoprotein 32 family member B Q92688 1-251 Peptide-Glu221+Asp-Peptide N MS Leu Asp Glu Glu Asp Glu Asp Glu Van Damme et al., 2010
Acidic leucine-rich nuclear phosphoprotein 32 family member B Q92688 1-251 Peptide-Asp228+Glu-Peptide N MS Glu Asp Glu Asp Glu Glu Glu Glu Van Damme et al., 2010
Acidic leucine-rich nuclear phosphoprotein 32 family member B Q92688 1-251 Peptide-Glu230+Glu-Peptide N MS Glu Asp Glu Glu Glu Glu Glu Gly Van Damme et al., 2010
Acidic leucine-rich nuclear phosphoprotein 32 family member B Q92688 1-251 peptide-Asp224+Glu-peptide P MS Glu Asp Glu Asp Glu Asp Glu Asp Van Damme et al., 2009
Acidic leucine-rich nuclear phosphoprotein 32 family member B Q92688 1-251 peptide-Glu225+Asp-peptide P MS Asp Glu Asp Glu Asp Glu Asp Glu Van Damme et al., 2009
Acidic leucine-rich nuclear phosphoprotein 32 family member B Q92688 1-251 peptide-Glu227+Asp-peptide P MS Asp Glu Asp Glu Asp Glu Glu Glu Van Damme et al., 2009
acidic leucine-rich nuclear phosphoprotein 32 family member E P97822 1-260 peptide-Asp229+Glu-peptide N MS Asp Tyr Val Asp Glu Gly Glu Glu Van Damme et al., 2009 25733
Acidic leucine-rich nuclear phosphoprotein 32 family member E Q9BTT0 1-268 Peptide-Leu47+Ser-Peptide N MS Leu Glu Phe Leu Ser Met Ala Asn Van Damme et al., 2010
Acidic leucine-rich nuclear phosphoprotein 32 family member E Q9BTT0 1-268 Peptide-Met49+Ala-Peptide N MS Phe Leu Ser Met Ala Asn Val Glu Van Damme et al., 2010
Acidic leucine-rich nuclear phosphoprotein 32 family member E P97822 1-260 peptide-Glu232+Glu-peptide P MS Asp Glu Gly Glu Glu Glu Glu Glu Van Damme et al., 2009
Acidic leucine-rich nuclear phosphoprotein 32 family member E Q9BTT0 1-268 peptide-Cys27+Leu-peptide P MS Leu Asp Asn Cys Leu Cys Val Asn Van Damme et al., 2009
Actin, alpha cardiac muscle 1 P68032 3-377 peptide-Asp53+Ser-peptide P MS Gly Gln Lys Asp Ser Tyr Val Gly Van Damme et al., 2009
Actin, alpha cardiac muscle 1 P68033 3-377 peptide-Asp246+Gly-peptide P MS Glu Leu Pro Asp Gly Gln Val Ile Van Damme et al., 2009
Actin, alpha skeletal muscle P68133 3-377 peptide-Asp53+Ser-peptide P MS Gly Gln Lys Asp Ser Tyr Val Gly Van Damme et al., 2009
Actin, alpha skeletal muscle P68134 3-377 peptide-Asp246+Gly-peptide P MS Glu Leu Pro Asp Gly Gln Val Ile Van Damme et al., 2009
Actin, aortic smooth muscle P62736 3-377 peptide-Asp13+Asn-peptide P MS Leu Val Cys Asp Asn Gly Ser Gly Van Damme et al., 2009
Actin, aortic smooth muscle P62736 3-377 peptide-Asp53+Ser-peptide P MS Gly Gln Lys Asp Ser Tyr Val Gly Van Damme et al., 2009
Actin, aortic smooth muscle P62737 3-377 peptide-Asp246+Gly-peptide P MS Glu Leu Pro Asp Gly Gln Val Ile Van Damme et al., 2009
actin, cytoplasmic 1 P60710 2-375 peptide-Asp11+Asn-peptide N MS Leu Val Val Asp Asn Gly Ser Gly Van Damme et al., 2009 22167
actin, cytoplasmic 1 P60710 2-375 peptide-Asp244+Gly-peptide N MS Glu Leu Pro Asp Gly Gln Val Ile Van Damme et al., 2009 22169
Actin, cytoplasmic 1 P60709 1-375 Peptide-Asp51+Ser-Peptide N MS Gly Gln Lys Asp Ser Tyr Val Gly Van Damme et al., 2010
Actin, cytoplasmic 1 P60709 1-375 Peptide-Asp222+Phe-Peptide N MS Val Ala Leu Asp Phe Glu Gln Glu Plasman et al., 2011
Actin, cytoplasmic 2 P63260 1-375 peptide-Asp11+Asn-peptide P MS Leu Val Ile Asp Asn Gly Ser Gly Van Damme et al., 2009
Actin, cytoplasmic 2 P63260 1-375 peptide-Asp222+Phe-peptide P MS Val Ala Leu Asp Phe Glu Gln Glu Van Damme et al., 2009
Actin, cytoplasmic 2 P63260 1-375 peptide-Asp244+Gly-peptide P MS Glu Leu Pro Asp Gly Gln Val Ile Van Damme et al., 2009
Actin, cytoplasmic 2 P63261 1-375 peptide-Asp51+Ser-peptide P MS Gly Gln Lys Asp Ser Tyr Val Gly Van Damme et al., 2009
Actin, gamma-enteric smooth muscle P63268 3-376 peptide-Asp245+Gly-peptide P MS Glu Leu Pro Asp Gly Gln Val Ile Van Damme et al., 2009
actin-like protein 6A Q9Z2N8 1-429 peptide-Asp59+Lys-peptide N MS Ile Asp Gly Asp Lys Gly Lys Gln Van Damme et al., 2009 22198
actin-like protein 6A O96019 1-429 peptide-Asp59+Lys-peptide P MS Ile Asp Gly Asp Lys Gly Lys Gln Van Damme et al., 2009
activated RNA polymerase II transcriptional coactivator p15 P11031 2-127 peptide-Asp16+Ser-peptide N MS Ser Gly Ser Asp Ser Asp Ser Glu Van Damme et al., 2009
activated RNA polymerase II transcriptional coactivator p15 P11031 2-127 peptide-Asp18+Ser-peptide N MS Ser Asp Ser Asp Ser Glu Val Glu Van Damme et al., 2009 25734
activated spleen cDNA, RIKEN full-length enriched library, clone:F830032H24 product:fragile X mental retardation gene 2, autosom Q3TA75 1-655 peptide-Asp451+Asn-peptide N MS Val Glu Gly Asp Asn Asp Lys Lys Van Damme et al., 2009 25736
activating transcription factor 7-interacting protein 1 Q7TT18 1-1306 peptide-Asp287+Ser-peptide N MS Pro Ser Gly Asp Ser Gln Ser Asp Van Damme et al., 2009 25737
Adenine phosphoribosyltransferase P07741 2-180 peptide-Asn137+Ala-peptide P MS Gly Thr Met Asn Ala Ala Cys Glu Van Damme et al., 2009
ADP-ribose pyrophosphatase, mitochondrial Q9BW91 47-350 peptide-Phe199+Val-peptide P MS Ile Leu Gln Phe Val Ala Ile Lys Van Damme et al., 2009
ADP-ribosylation factor-like protein 6-interacting protein 4 Q9JM93 1-229 peptide-Asp193+Gly-peptide N MS Ile Lys Gly Asp Gly Glu Val Leu Van Damme et al., 2009 25911
ADP-ribosylation factor-like protein 6-interacting protein 4 Q66PJ3 1-360 Peptide-Asp324+Gly-Peptide N MS Ile Lys Gly Asp Gly Glu Val Leu Van Damme et al., 2010
Afadin P55196 1-1824 Peptide-Asp1723+Ser-Peptide N MS Leu Ser Pro Asp Ser Leu Phe Thr Van Damme et al., 2010
Agrin O00468 30-2067 peptide-Arg1215+Ala-peptide P MS Thr Ala Phe Arg Ala Pro Asp Val Van Damme et al., 2009
Alanine--tRNA ligase, mitochondrial Q5JTZ9 24-985 peptide-Asp691+Glu-peptide P MS Val Gly Gln Asp Glu Ala Val Tyr Van Damme et al., 2009
alanyl-tRNA synthetase, cytoplasmic P49588 1-968 peptide-Asp632+Arg-peptide P Val Ala Pro Asp Arg Leu Arg Phe Casciola-Rosen et al., 1999 27179
Aldehyde dehydrogenase X, mitochondrial P30837 18-517 Peptide-Asp297+Ala-Peptide N MS Val Leu Ala Asp Ala Asp Met Glu Van Damme et al., 2010
Alkylated DNA repair protein alkB homolog 8 Q96BT7 1-664 Peptide-Asp316+Val-Peptide N MS Ile Thr Ser Asp Val Gly Asp Leu Van Damme et al., 2010
Alpha- and gamma-adaptin-binding protein p34 Q6PD74 1-315 peptide-Asp235+Ser-peptide P MS Ala Gln Val Asp Ser Ile Val Asp Van Damme et al., 2009
Alpha- and gamma-adaptin-binding protein p34 Q6PD74 1-315 peptide-Lys275+Ala-peptide P MS Met Lys Asp Lys Ala Ala Thr Leu Van Damme et al., 2009
alpha-enolase P17182 2-434 peptide-Asp23+Leu-peptide N MS Val Glu Val Asp Leu Tyr Thr Ala Van Damme et al., 2009 25741
alpha-enolase P06733 2-434 peptide-Asp23+Leu-peptide P MS Val Glu Val Asp Leu Phe Thr Ser Van Damme et al., 2009 22210
Alpha-taxilin P40222 1-546 peptide-Asn91+Gln-peptide P MS Val Asp Asn Asn Gln Gly Gly Pro Van Damme et al., 2009
Alpha-taxilin P40222 1-546 peptide-Asp98+Gly-peptide P MS Pro Gly Glu Asp Gly Ala Gln Gly Van Damme et al., 2009
Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 Q12904 1-312 Peptide-Asp172+Ser-Peptide N MS Pro Asp Ala Asp Ser Leu Tyr Val Van Damme et al., 2010
AMP deaminase 2 Q01433 1-879 Peptide-Asp170+Val-Peptide N MS Ile Ser Gln Asp Val Lys Leu Glu Van Damme et al., 2010
Anamorsin Q6FI81 1-312 Peptide-Asp216+Glu-Peptide N MS Ile Asp Ser Asp Glu Leu Leu Asp Van Damme et al., 2010
Ankyrin repeat and KH domain-containing protein 1 Q8IWZ3 1-2542 Peptide-Glu211+Ala-Peptide N MS Ser Leu Ala Glu Ala Cys Ser Asp Van Damme et al., 2010
Ankyrin repeat and KH domain-containing protein 1 Q8IWZ3 1-2542 Peptide-Thr1520+Ser-Peptide N MS Ile Ser Ala Thr Ser Ala Thr Phe Van Damme et al., 2010
Ankyrin repeat and KH domain-containing protein 1 Q8IWZ3 1-2542 Peptide-His1631+Ser-Peptide N MS Leu Leu Leu His Ser Gln Glu Glu Van Damme et al., 2010
Ankyrin repeat and KH domain-containing protein 1 Q8IWZ3 1-2542 peptide-Asp4+Ser-peptide P MS Met Leu Thr Asp Ser Gly Gly Gly Van Damme et al., 2009
Ankyrin repeat and KH domain-containing protein 1 Q8IWZ3 1-2542 peptide-Asp76+Phe-peptide P MS Ala Ala Leu Asp Phe Lys Leu Ala Van Damme et al., 2009
Ankyrin repeat and LEM domain-containing protein 2 Q86XL3 1-938 Peptide-Asp737+Lys-Peptide N MS Val Glu Phe Asp Lys Leu Asn Leu Van Damme et al., 2010
ankyrin repeat domain-containing protein 17 Q99NH0 1-2603 peptide-Asp136+Asp-peptide N MS Leu Asp Gln Asp Asp Leu Glu Asn Van Damme et al., 2009 25801
Ankyrin repeat domain-containing protein 17 O75179 1-2603 Peptide-Asp140+Asp-Peptide N MS Leu Asp Gln Asp Asp Leu Glu Asn Van Damme et al., 2010 25800
Ankyrin repeat domain-containing protein 17 O75179 1-2603 Peptide-Cys242+Ser-Peptide N MS Ala Glu Ala Cys Ser Glu Gly Asp Van Damme et al., 2010
Ankyrin repeat domain-containing protein 17 O75179 1-2603 Peptide-Asp246+Val-Peptide N MS Ser Glu Gly Asp Val Asn Ala Val Van Damme et al., 2010
Ankyrin repeat domain-containing protein 17 Q99NH0 1-2603 peptide-Glu801+Ser-peptide P MS Gln Ser Pro Glu Ser Ile Val Glu Van Damme et al., 2009
Ankyrin-1 P16157 2-1881 Peptide-Asp887+Ser-Peptide N MS Tyr Asp Glu Asp Ser Leu Ile Pro Van Damme et al., 2010
Ankyrin-1 P16157 1-1881 peptide-Asp1629+Ala-peptide P MS Val Asp Ser Asp Ala Thr Asn Gly Van Damme et al., 2009
Annexin A11 P50995 1-505 Peptide-Asp219+Glu-Peptide N MS Phe Gly Thr Asp Glu Gln Ala Ile Van Damme et al., 2010
Annexin A11 P50995 1-505 Peptide-Asp291+Glu-Peptide N MS Val Gly Thr Asp Glu Ala Cys Leu Van Damme et al., 2010
Annexin A7 P20073 1-488 peptide-Asp204+Glu-peptide P MS Phe Gly Thr Asp Glu Gln Ala Ile Van Damme et al., 2009
antigen KI-67 P46013 1-3256 peptide-Asp1481+Lys-peptide P Val Cys Thr Asp Lys Pro Thr Thr Casciola-Rosen et al., 1999 27182
Antigen KI-67 P46013 1-3256 peptide-Asp2490+Met-peptide P MS Val Lys Val Asp Met Lys Glu Glu Van Damme et al., 2009
AP-3 complex subunit delta-1 O14617 1-1153 Peptide-Asp722+Gln-Peptide N MS Pro Met Ser Asp Gln Tyr Val Lys Van Damme et al., 2010
AP-3 complex subunit delta-1 O14617 1-1153 Peptide-Asp708+Leu-Peptide N MS Val Gln Ile Asp Leu Ser Val Pro Van Damme et al., 2010
Apoptotic chromatin condensation inducer in the nucleus Q9UKV3 1-1341 Peptide-Asp1231+Ser-Peptide N MS Pro Leu Thr Asp Ser Gln Ile Val Van Damme et al., 2010
ARF GTPase-activating protein GIT1 Q9Y2X7 1-761 peptide-Asp389+Glu-peptide P MS Val Ala Ser Asp Glu Asp Thr Asp Van Damme et al., 2009
ARF GTPase-activating protein GIT2 Q9JLQ2 1-708 peptide-Asp397+Glu-peptide N MS Val Ala Ser Asp Glu Asp Thr Asp Van Damme et al., 2009 25744
ARF GTPase-activating protein GIT2 Q14161 1-759 peptide-Asp591+Tyr-peptide P MS Pro Glu Ser Asp Tyr Asp Asn Thr Van Damme et al., 2009
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 Q15057 1-778 peptide-Asn583+Ser-peptide P MS Val Ser Ala Asn Ser Leu Tyr Glu Van Damme et al., 2009
Arginine/serine-rich coiled-coil protein 2 Q7L4I2 2-434 Peptide-Glu388+Ser-Peptide N MS Val Asp Glu Glu Ser Tyr Lys Thr Van Damme et al., 2010
arhgap15 Rho GTPase activating protein 15 isoform 1 Q811M1 1-481 peptide-Asp56+Ala-peptide N MS Ile Leu Thr Asp Ala Gly Lys Val Van Damme et al., 2009 25887
Asparagine--tRNA ligase, cytoplasmic O43776 2-548 Peptide-Glu223+Ser-Peptide N MS Ile Asn Glu Glu Ser Asp Val Asp Van Damme et al., 2010
Asparagine--tRNA ligase, cytoplasmic O43776 2-548 Peptide-Asp429+Thr-Peptide N MS Leu Met Thr Asp Thr Ile Asn Glu Van Damme et al., 2010
Asparagine--tRNA ligase, cytoplasmic Q8BP47 1-559 peptide-Glu234+Ser-peptide P MS Ile Asn Glu Glu Ser Asp Val Asp Van Damme et al., 2009
AT-rich interactive domain-containing protein 4B Q4LE39 1-1312 Peptide-Asp200+Cys-Peptide N MS Val Cys Pro Asp Cys Ser Asp Glu Van Damme et al., 2010
Ataxin-2 Q99700 1-1313 Peptide-Asp429+Asn-Peptide N MS Leu Glu Arg Asp Asn Ser Glu Glu Van Damme et al., 2010
Ataxin-2-like protein Q8WWM7 1-1075 Peptide-Asp1068+Ala-Peptide N MS Val Gly Gln Asp Ala Arg Val Leu Van Damme et al., 2010
Ataxin-3 P54252 1-364 peptide-Asp267+Met-peptide P MS Ile Ser Gln Asp Met Thr Gln Thr Van Damme et al., 2009
ATP synthase subunit alpha, mitochondrial Q03265 44-553 peptide-Asp63+Thr-peptide N MS Leu Gly Ala Asp Thr Ser Val Asp Van Damme et al., 2009 22201
ATP synthase subunit alpha, mitochondrial P25705 44-553 peptide-Asp63+Thr-peptide P MS Leu Gly Ala Asp Thr Ser Val Asp Van Damme et al., 2009
ATP synthase subunit alpha, mitochondrial P25705 44-553 peptide-Asp224+Thr-peptide P MS Ile Ala Ile Asp Thr Ile Ile Asn Van Damme et al., 2009
ATP-binding cassette sub-family F member 1 Q6P542 1-837 peptide-Asp136+Asp-peptide N MS Leu Ile Gln Asp Asp Ser Glu Glu Van Damme et al., 2009 25746
ATP-binding cassette sub-family F member 1 Q6P542 1-837 peptide-Asp137+Ser-peptide N MS Ile Gln Asp Asp Ser Glu Glu Glu Van Damme et al., 2009 25747
ATP-binding cassette sub-family F member 1 Q8NE71 1-845 Peptide-Asp372+Glu-Peptide N MS Val Val Ala Asp Glu Thr Pro Ala Van Damme et al., 2010
ATP-binding cassette sub-family F member 1 Q8NE71 1-845 peptide-Asp138+Gln-peptide P MS Leu Ile Gln Asp Gln Ser Glu Glu Van Damme et al., 2009
ATP-binding cassette sub-family F member 2 Q99LE6 1-628 peptide-Asp55+Gly-peptide N MS Thr Thr Gly Asp Gly Glu Val Asp Van Damme et al., 2009 25748
ATP-binding cassette sub-family F member 2 Q99LE6 1-628 peptide-Asp59+Leu-peptide N MS Gly Glu Val Asp Leu Leu Thr Lys Van Damme et al., 2009 22197
ATP-binding cassette sub-family F member 2 Q9UG63 1-623 Peptide-Asp54+Leu-Peptide N MS Thr Glu Val Asp Leu Leu Thr Lys Van Damme et al., 2010
ATP-binding cassette sub-family F member 3 Q9NUQ8 1-709 Peptide-Asp54+Ser-Peptide N MS Val Ser Gly Asp Ser Lys Asp Asp Van Damme et al., 2010
ATP-dependent RNA helicase A Q08211 1-1270 Peptide-Glu162+Ser-Peptide N MS Ala Thr Leu Glu Ser Glu Glu Val Van Damme et al., 2010
ATP-dependent RNA helicase A Q08211 1-1270 Peptide-Thr160+Leu-Peptide N MS Val Gln Ala Thr Leu Glu Ser Glu Van Damme et al., 2010
ATP-dependent RNA helicase DDX1 Q91VR5 1-740 peptide-Asp676+Ile-peptide N MS Val Glu Pro Asp Ile Lys Val Pro Van Damme et al., 2009 25749
ATP-dependent RNA helicase DDX18 Q9NVP1 1-670 Peptide-Asp124+Thr-Peptide N MS Ala Glu Pro Asp Thr Lys Lys Ala Van Damme et al., 2010
ATP-dependent RNA helicase DDX24 Q9GZR7 1-859 Peptide-Glu307+Ala-Peptide N MS Ile Glu Ser Glu Ala Leu Pro Ser Van Damme et al., 2010
ATP-dependent RNA helicase DDX24 Q9GZR7 1-859 Peptide-Asp334+Asp-Peptide N MS Leu Phe Gly Asp Asp Asp Ala Gly Van Damme et al., 2010
ATP-dependent RNA helicase DDX24 Q9GZR7 1-859 Peptide-Gln328+Ala-Peptide N MS Val Ser Asp Gln Ala Leu Leu Phe Van Damme et al., 2010
ATP-dependent RNA helicase DDX3X O00571 2-662 Peptide-Asp13+Gln-Peptide N MS Leu Gly Leu Asp Gln Gln Phe Ala Van Damme et al., 2010
ATP-dependent RNA helicase DDX50 Q99MJ9 1-734 peptide-Asp9+Ile-peptide N MS Leu Trp Gly Asp Ile Met Glu Leu Van Damme et al., 2009 25750
ATP-dependent RNA helicase DDX50 Q9BQ39 1-737 Peptide-Glu147+Thr-Peptide N MS Ile Ser Glu Glu Thr Ile Lys Leu Van Damme et al., 2010
ATP-dependent RNA helicase DDX50 Q9BQ39 1-737 Peptide-Asp380+Val-Peptide N MS Val Ile Gly Asp Val Leu Gln Val Van Damme et al., 2010
ATP-dependent RNA helicase DDX51 Q6P9R1 1-639 peptide-Glu13+Ala-peptide P MS Ala Gly Pro Glu Ala Ala Gly Gln Van Damme et al., 2009
ATP-dependent RNA helicase DHX29 Q7Z478 1-1369 peptide-Glu35+Ala-peptide P MS Ile Ala Gly Glu Ala Gln Ser Lys Van Damme et al., 2009
ATP-dependent RNA helicase DHX8 Q14562 2-1220 Peptide-Asp144+Val-Peptide N MS Val Ala Val Asp Val Leu Lys Glu Van Damme et al., 2010
ATPase WRNIP1 Q96S55 1-665 peptide-Asp234+Thr-peptide P MS Met Arg Pro Asp Thr Leu Gln Asp Van Damme et al., 2009
Autophagy-related protein 16-1 Q676U5 1-607 Peptide-Asp237+Asp-Peptide N MS Val Glu Gln Asp Asp Asp Ile Glu Van Damme et al., 2010
Basal cell adhesion molecule P50895 32-628 peptide-Asn530+Lys-peptide P MS Pro His Gly Asn Lys Arg His Val Van Damme et al., 2009
Basic fibroblast growth factor receptor 1 P11362 22-822 peptide-Asp432+Ser-peptide P CS Val Ser Ala Asp Ser Ser Ala Ser Loeb et al., 2006
Bcl-2-associated transcription factor 1 Q9NYF8 1-920 Peptide-Asp895+Gly-Peptide N MS Tyr Gln Gly Asp Gly Ile Val Glu Van Damme et al., 2010
Bcl-2-associated transcription factor 1 Q9NYF8 1-920 Peptide-Asp541+Ser-Peptide N MS Ile Ala Ser Asp Ser His Arg Pro Van Damme et al., 2010
Bcl-2-associated transcription factor 1 Q9NYF8 1-920 peptide-Asp382+Tyr-peptide P MS Glu Ala Leu Asp Tyr Phe Ser Asp Van Damme et al., 2009
Bcl-2-associated transcription factor 1 Q9NYF8 1-920 peptide-Asp418+Gln-peptide P MS Val Leu Ala Asp Gln Gly Lys Ser Van Damme et al., 2009
Bcl2 antagonist of cell death (BAD) Q61337 1-204 peptide-Asp61+Arg-peptide P Ser Ala Thr Asp Arg Gly Leu Gly Condorelli et al., 2001
Bcl2 antagonist of cell death (BAD) Q61337 1-204 peptide-Asp56+Ala-peptide P Glu Gln Glu Asp Ala Ser Ala Thr Condorelli et al., 2001
BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 Q12982 1-314 Peptide-Asp28+Ile-Peptide N MS Ile Glu Ala Asp Ile Leu Ala Ile Van Damme et al., 2010
Beta-actin-like protein 2 Q8BFZ3 1-376 peptide-Asp245+Gly-peptide P MS Glu Leu Pro Asp Gly Gln Val Ile Van Damme et al., 2009
Beta-catenin-like protein 1 Q8WYA6 1-563 Peptide-Asp476+Thr-Peptide N MS Ile Asp Asn Asp Thr Glu Glu Glu Van Damme et al., 2010
Beta-enolase P21550 2-434 peptide-Asp318+Asp-peptide P MS Ile Val Gly Asp Asp Leu Thr Val Van Damme et al., 2009
BH3-interacting domain death agonist P55957 1-195 peptide-Asp75+Ser-peptide P Ile Glu Ala Asp Ser Glu Ser Gln Casciola-Rosen et al., 2007 3302
BH3-interacting domain death agonist (BID) P70444 1-195 peptide-Asp75+Ser-peptide N Ile Glu Pro Asp Ser Glu Ser Gln Casciola-Rosen et al., 2007
Bifunctional aminoacyl-tRNA synthetase P07814 1-1512 Peptide-Asn815+Ser-Peptide N MS Ile Ser Ser Asn Ser Ser Ala Ser Van Damme et al., 2010
Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial P13995 36-350 Peptide-Asp263+Met-Peptide N MS Ile Thr Ala Asp Met Ile Lys Glu Van Damme et al., 2010
Biorientation of chromosomes in cell division protein 1-like Q8NFC6 1-3051 Peptide-Asp200+Ala-Peptide N MS Val Ala Asn Asp Ala Met Ser Ile Van Damme et al., 2010
blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0015P12 product:SWI/SNF related, matrix associated, act Q3TKT4 1-1613 peptide-Asp694+Ser-peptide N MS Pro Asp Pro Asp Ser Asp Asp Val Van Damme et al., 2009 25751
Boc-Ala-Ala-Asp-SBzl Boc-Ala-Ala-Asp+SBzl S Boc Ala Ala Asp SBz - - - Froelich, 2004
bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830028H02 product:splicing factor 3b, subunit 2, full in Q3UAI4 1-878 peptide-Asp572+Leu-peptide N MS Ile His Gly Asp Leu Tyr Tyr Glu Van Damme et al., 2009 25752
Brain-specific angiogenesis inhibitor 1-associated protein 2 Q9UQB8 1-552 Peptide-Asn250+Gly-Peptide N MS Val Ala Ser Asn Gly Ala Thr Leu Van Damme et al., 2010
BRCA1-A complex subunit RAP80 Q96RL1 1-719 Met-Pro-Arg-Arg4+Lys-Peptide N MS Met Pro Arg Arg Lys Lys Lys Val Van Damme et al., 2010
Breakpoint cluster region protein P11274 1-1271 Peptide-Asp245+Tyr-Peptide N MS Val Asp Gly Asp Tyr Glu Asp Ala Van Damme et al., 2010
Breakpoint cluster region protein P11274 1-1271 Peptide-Asn264+Gly-Peptide N MS Ile Asp Ala Asn Gly Gly Ser Arg Van Damme et al., 2010
Breakpoint cluster region protein P11274 1-1271 peptide-Asp243+Gly-peptide P MS Cys Gly Val Asp Gly Asp Tyr Glu Van Damme et al., 2009
Bromodomain adjacent to zinc finger domain protein 1A Q9NRL2 1-1556 Peptide-Asp1346+Val-Peptide N MS Leu Gln Ala Asp Val Phe Val Glu Van Damme et al., 2010
Bromodomain-containing protein 2 P25440 1-801 peptide-Asp687+Phe-peptide P MS Ile Glu Ile Asp Phe Glu Thr Leu Van Damme et al., 2009
Bromodomain-containing protein 4 O60885 1-1362 peptide-Asp655+Phe-peptide P MS Ile Glu Ile Asp Phe Glu Thr Leu Van Damme et al., 2009
BSD domain-containing protein 1 Q9NW68 1-430 peptide-Asp100+Val-peptide P MS Ile Asp Cys Asp Val Ile Thr Leu Van Damme et al., 2009
BUD13 homolog Q9BRD0 1-619 Peptide-Asp446+Gln-Peptide N MS Lys Glu Gln Asp Gln Glu Thr Met Van Damme et al., 2010
BUD13 homolog Q9BRD0 1-619 Peptide-Leu610+Ala-Peptide N MS Val Glu Glu Leu Ala Tyr Lys Trp Van Damme et al., 2010
Bystin Q13895 1-437 Peptide-Asp21+Gln-Peptide N MS Pro Leu Ala Asp Gln Ile Leu Ala Van Damme et al., 2010
Bystin Q13895 1-437 peptide-Glu72+His-peptide P MS Leu Glu Ala Glu His Gly Thr Gly Van Damme et al., 2009
C-1-tetrahydrofolate synthase, cytoplasmic P11586 2-935 Peptide-Asp255+Val-Peptide N MS Val Val Gly Asp Val Ala Tyr Asp Van Damme et al., 2010
C-1-tetrahydrofolate synthase, cytoplasmic P11586 2-935 peptide-Asp837+Asp-peptide P MS Tyr Gly Ala Asp Asp Ile Glu Leu Van Damme et al., 2009
C2 domain-containing protein 5 Q86YS7 1-1000 peptide-Asp833+Ser-peptide P MS Leu Cys Ser Asp Ser Leu Pro Ser Van Damme et al., 2009
CAD protein P27708 2-2225 peptide-Asp791+His-peptide P MS Val Gly Phe Asp His Thr Val Lys Van Damme et al., 2009
CAD protein P27708 2-2225 peptide-Asp1454+Cys-peptide P MS Val His Val Asp Cys Met Thr Ser Van Damme et al., 2009
Calcium homeostasis endoplasmic reticulum protein Q8IWX8 1-916 peptide-Asp485+Ala-peptide P MS Asn Gln Pro Asp Ala Ala Trp Asn Van Damme et al., 2009
Calcium-activated potassium channel subunit alpha-1 Q12791 1-1236 Peptide-Asp1008+Thr-Peptide P CS Leu Val Asn Asp Thr Asn Val Gln Gahring et al., 2001
calcium/calmodulin-dependent protein kinase type IV P08414 1-469 peptide-Asp40+Phe-peptide N MS Pro Leu Gly Asp Phe Phe Glu Val Van Damme et al., 2009 25754
Calmodulin P62158 2-149 peptide-Arg75+Lys-peptide P MS Met Met Ala Arg Lys Met Lys Asp Van Damme et al., 2009
Calpain-2 catalytic subunit P17655 20-700 Peptide-Asp31+Tyr-Peptide N MS Leu Asn Gln Asp Tyr Glu Ala Leu Van Damme et al., 2010
Calpastatin P20810 1-708 peptide-Asp229+Asp-peptide P MS Ile Gly Pro Asp Asp Ala Ile Asp Van Damme et al., 2009
Calumenin O43852 20-315 Peptide-Asp50+Ala-Peptide N MS Tyr Asp His Asp Ala Phe Leu Gly Van Damme et al., 2010
Calumenin O43852 20-315 Peptide-Phe61+Asp-Peptide N MS Ala Lys Thr Phe Asp Gln Leu Thr Van Damme et al., 2010
cAMP-dependent protein kinase type II-alpha regulatory subunit P13861 2-404 Peptide-Glu103+Thr-Peptide N MS Val Cys Ala Glu Thr Tyr Asn Pro Van Damme et al., 2010
cAMP-dependent protein kinase type II-beta regulatory subunit P31323 2-418 Peptide-Glu118+Ala-Peptide N MS Val Cys Ala Glu Ala Tyr Asn Pro Van Damme et al., 2010
CAP-Gly domain-containing linker protein 1 Q922J3 1-1391 peptide-Asp605+Ser-peptide N MS Ile Gly Thr Asp Ser Ala Glu Phe Van Damme et al., 2009 25755
Caprin-1 Q14444 1-709 Peptide-Asp375+Ser-Peptide N MS Phe Ile Gln Asp Ser Met Leu Asp Van Damme et al., 2010
CapZ-interacting protein Q6JBY9 1-416 peptide-Glu330+His-peptide P MS Val Gly Pro Glu His Asp Ser Gln Van Damme et al., 2009
Casein kinase II subunit alpha' P19784 1-350 Peptide-Asp338+Asn-Peptide N MS Pro Cys Ala Asp Asn Ala Val Leu Van Damme et al., 2010
CASP8-associated protein 2 Q9UKL3 2-1982 peptide-Asn724+Phe-peptide P MS Val Ser Gln Asn Phe Gly Leu Glu Van Damme et al., 2009
caspase 7 precursor P55210 1-303 peptide-Asp198+Ser-peptide P Ile Gln Ala Asp Ser Gly Pro Ile Yang et al., 1999 18053
Caspase recruitment domain-containing protein 11 Q9BXL7 1-1154 Peptide-Asp461+Phe-Peptide N MS Ile Ser Gln Asp Phe Gly Asp Ala Van Damme et al., 2010
caspase-10 precursor Q92851 1-521 peptide-Asp415+Ala-peptide P Ile Glu Ala Asp Ala Leu Asn Pro Adrain et al., 2006 23139
caspase-3 precursor P42574 29-277 peptide-Asp175+Ser-peptide P Ile Glu Thr Asp Ser Gly Val Asp Casciola-Rosen et al., 2007 18054
caspase-3 precursor P70677 29-277 peptide-Asp175+Ser-peptide N Ile Glu Thr Asp Ser Gly Thr Asp Casciola-Rosen et al., 2007
Caspase-4 P70343 1-373 peptide-Asp59+Ala-peptide P CS Val Phe Val Asp Ala Met Lys Lys Wang et al., 1996
Caspase-4 P70343 1-373 peptide-Asp80+Pro-peptide P CS Phe Ser Val Asp Pro Gly Ser His Wang et al., 1996
Caspase-4 P70343 1-373 peptide-Asp285+Ala-peptide P CS Met Glu Ala Asp Ala Val Lys Leu Wang et al., 1996
caspase-8 precursor Q14790 1-479 peptide-Asp374+Ser-peptide P Val Glu Thr Asp Ser Glu Glu Gln Adrain et al., 2006 23138
caspase-9 precursor Q53Y70 1-416 peptide-Asp315+Ala-peptide P Pro Glu Pro Asp Ala Thr Pro Phe Srinivasula et al., 1998 3306
Catenin delta-1 O60716 1-968 Peptide-Asp161+Gly-Peptide N MS Met Gly Pro Asp Gly Leu Pro Val Van Damme et al., 2010
CCAAT/enhancer-binding protein zeta Q03701 1-1054 Peptide-Asp685+Asn-Peptide N MS Val His Phe Asp Asn Leu Lys Gly Van Damme et al., 2010
CCAAT/enhancer-binding protein zeta Q03701 1-1054 Peptide-Lys1034+Lys-Peptide N MS Ile Ile Lys Lys Lys Lys His Phe Van Damme et al., 2010
CCR4-NOT transcription complex subunit 10 Q9H9A5 1-744 peptide-Asp612+Gln-peptide P MS Asn Glu Gln Asp Gln Gly Ser Asp Van Damme et al., 2009
CCR4-NOT transcription complex subunit 2 Q9NZN8 1-540 Peptide-Asp36+Tyr-Peptide N MS Val Asp Ser Asp Tyr His Asp Glu Van Damme et al., 2010
CDKN2A-interacting protein Q9NXV6 2-580 Peptide-Asp157+His-Peptide N MS Val Glu Gln Asp His Ala Lys Thr Van Damme et al., 2010
CDKN2AIP N-terminal-like protein Q96HQ2 1-116 Peptide-Glu5+Ala-Peptide N MS Val Gly Gly Glu Ala Ala Ala Ala Van Damme et al., 2010
cell death regulator Aven Q9D9K3 1-342 peptide-Asp81+Ser-peptide N MS Val Glu Glu Asp Ser Asp Ser Glu Van Damme et al., 2009 22203
cell death regulator Aven Q9NQS1 1-362 peptide-Asp93+Ser-peptide P MS Val Glu Asp Asp Ser Asp Ala Glu Van Damme et al., 2009 22202
cell division cycle 5-like protein Q99459 1-802 peptide-Asp145+Glu-peptide P MS Ile Asp Met Asp Glu Asp Glu Leu Van Damme et al., 2009
Cell division cycle 5-like protein Q99459 1-802 Peptide-Asp458+Tyr-Peptide N MS Gly Met Ala Asp Tyr Ser Asp Pro Van Damme et al., 2010
Cell division cycle 5-like protein Q99459 1-802 Peptide-Thr282+Ser-Peptide N MS Ile Leu Gln Thr Ser Gly Val Ser Van Damme et al., 2010
Cell division cycle 5-like protein Q6A068 1-802 peptide-Glu496+Asn-peptide P MS Val Leu Pro Glu Asn Ala Glu Lys Van Damme et al., 2009
Cell division cycle 5-like protein Q99459 1-802 peptide-Asp304+Ala-peptide P MS Gln Ile Ser Asp Ala Glu Leu Gln Van Damme et al., 2009
cell division cycle 5-related protein Q6A068 1-802 peptide-Asp145+Glu-peptide N MS Ile Asp Met Asp Glu Asp Glu Leu Van Damme et al., 2009 22204
Cell division cycle protein 27 homolog P30260 1-824 Peptide-Asp243+Thr-Peptide N MS Ile Ser Pro Asp Thr Val Pro Leu Van Damme et al., 2010
Cell division cycle protein 27 homolog P30260 1-824 Peptide-Asp801+Glu-Peptide N MS Met Gly Thr Asp Glu Ser Gln Glu Van Damme et al., 2010
Cell division cycle-associated protein 2 Q69YH5 1-1023 peptide-Asp795+Val-peptide P MS Cys Leu Gly Asp Val Leu Ile Glu Van Damme et al., 2009
cell growth-regulating nucleolar protein Q08288 1-388 peptide-Asp266+Ala-peptide N MS Pro Gly Glu Asp Ala Ala Glu Gly Van Damme et al., 2009 25757
Cell growth-regulating nucleolar protein Q9NX58 1-379 Peptide-Asn242+Gly-Peptide N MS Pro Glu Ala Asn Gly Ser Ala Gly Van Damme et al., 2010
Centrosomal protein of 170 kDa Q5SW79 1-1584 Peptide-Asp285+Asp-Peptide N MS Ile Glu Phe Asp Asp Ser Thr Pro Van Damme et al., 2010
Centrosomal protein of 170 kDa Q5SW79 1-1584 Peptide-Glu932+Ser-Peptide N MS Ile Ser Pro Glu Ser Asp Val Asp Van Damme et al., 2010
Centrosomal protein of 170 kDa Q5SW79 1-1584 Peptide-Asp1118+Ala-Peptide N MS Glu Leu Ala Asp Ala Asp Lys Ala Van Damme et al., 2010
Centrosome and spindle pole-associated protein 1 Q1MSJ5 1-1256 peptide-Asp1099+Ser-peptide P MS Leu Glu Ser Asp Ser Ala Phe Ile Van Damme et al., 2009
Centrosome and spindle pole-associated protein 1, Isoform 1 Q1MSJ5-1 1-1221 Peptide-Asp1064+Ser-Peptide N MS Leu Glu Ser Asp Ser Ala Phe Ile Van Damme et al., 2010
cerebral protein 1 homolog Q9DB85 1-457 peptide-Asp63+Ser-peptide N MS Pro Gly Ser Asp Ser Glu Glu Glu Van Damme et al., 2009 25758
cGMP-gated cation channel alpha-1 P29973 1-690 Peptide-Asp330+Thr-Peptide P CS Phe Gly Asn Asp Thr Trp Val Tyr Gahring et al., 2001
Charged multivesicular body protein 1a Q9HD42 1-196 Peptide-Gln164+Leu-Peptide N MS Val Leu Asp Gln Leu Ser Gln Leu Van Damme et al., 2010
Chloride intracellular channel protein 1 O00299 2-241 Peptide-Asp225+Asp-Peptide N MS Thr Cys Pro Asp Asp Glu Glu Ile Van Damme et al., 2010
Chloride intracellular channel protein 2 O15247 1-247 Peptide-Asp161+Ser-Peptide N MS Ile Asp Pro Asp Ser Ala Glu Glu Van Damme et al., 2010
Chromodomain Y-like protein Q9Y232 1-598 Peptide-Glu234+Val-Peptide N MS Val Ala Pro Glu Val Ala Ala Glu Van Damme et al., 2010
Chromodomain-helicase-DNA-binding protein 1 O14646 1-1710 peptide-Asp300+Gly-peptide P MS Val Glu Ala Asp Gly Asp Pro Asn Van Damme et al., 2009
chromodomain-helicase-DNA-binding protein 3 Q12873 1-2000 peptide-Asp1316+Tyr-peptide P Val Asp Pro Asp Tyr Trp Glu Lys Casciola-Rosen et al., 1999 27171
Chromodomain-helicase-DNA-binding protein 3 Q12873 1-2000 Peptide-Asp314+Glu-Peptide N MS Phe Gln Ser Asp Glu Gly Pro Glu Van Damme et al., 2010
chromodomain-helicase-DNA-binding protein 4 Q6PDQ2 1-1915 peptide-Asp77+Ser-peptide N MS Glu Leu Gly Asp Ser Ser Gly Glu Van Damme et al., 2009 22172
chromodomain-helicase-DNA-binding protein 4 Q6PDQ2 1-1915 peptide-Asp1358+Tyr-peptide N MS Asn Gln Ser Asp Tyr Ser Val Ala Van Damme et al., 2009 22174
Chromodomain-helicase-DNA-binding protein 4 Q14839 1-1912 Peptide-Asp320+Phe-Peptide N MS Val Glu Ser Asp Phe Asp Asp Ala Van Damme et al., 2010
Chromodomain-helicase-DNA-binding protein 4 Q14839 1-1912 Peptide-Asp587+Phe-Peptide N MS Pro Ser Gly Asp Phe Gly Gly Asp Van Damme et al., 2010
chromodomain-helicase-DNA-binding protein 7 A2AJK6 1-2986 peptide-Asp1425+Lys-peptide N MS Leu Gly Leu Asp Lys Ala Val Leu Van Damme et al., 2009 25851
Chromodomain-helicase-DNA-binding protein 7 Q9P2D1 1-2997 Peptide-Asp1709+Ala-Peptide N MS Val Val Gln Asp Ala Asp Trp Leu Van Damme et al., 2010
Chromodomain-helicase-DNA-binding protein 7 Q9P2D1 1-2997 peptide-Asp1435+Lys-peptide P MS Leu Gly Leu Asp Lys Ala Val Leu Van Damme et al., 2009
Chromodomain-helicase-DNA-binding protein 8 Q09XV5 1-2582 peptide-Asp1280+Lys-peptide P MS Leu Gly Leu Asp Lys Ala Val Leu Van Damme et al., 2009
Chromodomain-helicase-DNA-binding protein 8 Q9HCK8 1-2581 peptide-Asp1278+Lys-peptide P MS Leu Gly Leu Asp Lys Ala Val Leu Van Damme et al., 2009
Chromodomain-helicase-DNA-binding protein 8 Q9HCK8 1-2581 peptide-Asp1688+Lys-peptide P MS Val Asp Phe Asp Lys Asp Cys Glu Van Damme et al., 2009
Chromodomain-helicase-DNA-binding protein 8 Q9HCK8 1-2581 peptide-Glu2299+Cys-peptide P MS Leu Glu Val Glu Cys Met Glu Glu Van Damme et al., 2009
Chromodomain-helicase-DNA-binding protein 9 Q3L8U1 1-2897 peptide-Asp1327+Lys-peptide P MS Leu Gly Leu Asp Lys Ala Val Leu Van Damme et al., 2009
Chromodomain-helicase-DNA-binding protein 9 Q3L8U1 1-2897 peptide-Glu2043+Glu-peptide P MS Ile Ile Leu Glu Glu Met Lys Val Van Damme et al., 2009
Chromodomain-helicase-DNA-binding protein 9 Q8BYH8 1-2885 peptide-Asp1326+Lys-peptide P MS Leu Gly Leu Asp Lys Ala Val Leu Van Damme et al., 2009
chromosome-associated kinesin KIF4 P33174 1-1231 peptide-Asp810+Ser-peptide N MS His Gly Gln Asp Ser Gly Ala Glu Van Damme et al., 2009 25759
Claspin Q9HAW4 1-1339 peptide-Asp213+Leu-peptide P MS Val Asp Lys Asp Leu Phe Glu Thr Van Damme et al., 2009
Clathrin heavy chain 1 Q00610 2-1675 Peptide-Arg895+Glu-Peptide N MS Arg Phe Leu Arg Glu Asn Pro Tyr Van Damme et al., 2010
clathrin light chain B Q6IRU5 1-229 peptide-Asp75+Val-peptide N MS Val Asn Gly Asp Val Phe Gln Glu Van Damme et al., 2009 22205
Clathrin light chain B P09497 1-229 peptide-Asp75+Val-peptide P MS Val Asn Gly Asp Val Phe Gln Glu Van Damme et al., 2009
cleavage and polyadenylation specificity factor subunit 6 Q6NVF9 1-551 peptide-Asp63+Val-peptide N MS Val Gly Asp Asp Val Gly Lys Gly Van Damme et al., 2009 25760
Cleavage stimulation factor subunit 3 Q12996 1-717 peptide-Asn677+Ala-peptide P MS Val Glu Ser Asn Ala Val Leu Thr Van Damme et al., 2009
CLIP-associating protein 1 Q80TV8 1-1535 peptide-Asp1166+Thr-peptide N MS Leu Asp Tyr Asp Thr Glu Asn Leu Van Damme et al., 2009 25761
CLIP-associating protein 1 Q7Z460 1-1538 Peptide-Asp1169+Thr-Peptide N MS Leu Asp Tyr Asp Thr Glu Asn Leu Van Damme et al., 2010
CLIP-associating protein 1 Q7Z460 1-1538 peptide-Asp806+Ala-peptide P MS Ala Val Ala Asp Ala Leu Lys Lys Van Damme et al., 2009
CLIP-associating protein 2 O75122 1-1294 Peptide-Asp604+Ala-Peptide N MS Ala Val Ala Asp Ala Leu Lys Lys Van Damme et al., 2010
CLIP-associating protein 2 O75122 1-1294 peptide-Asn375+Ala-peptide P MS Ile Asp Val Asn Ala Ala Ala Gly Van Damme et al., 2009
Coatomer subunit alpha P53621 1-1224 Peptide-Asp180+Val-Peptide N MS Val Glu Ser Asp Val Arg Gly Ile Van Damme et al., 2010
Cohesin subunit SA-2 Q8N3U4 1-1231 Peptide-Asp1192+Thr-Peptide N MS Met Asp Phe Asp Thr Met Asp Ile Van Damme et al., 2010
Coiled-coil and C2 domain-containing protein 1B Q5T0F9 1-858 Peptide-Gly25+Leu-Peptide N MS Lys Gln Met Gly Leu Phe Met Glu Van Damme et al., 2010
coiled-coil domain-containing protein 104 Q8C6E0 1-343 peptide-Asp137+Cys-peptide N MS Val Leu Pro Asp Cys Leu Thr Asp Van Damme et al., 2009 25762
Coiled-coil domain-containing protein 12 Q8WUD4 1-166 Peptide-Asp155+Ala-Peptide N MS Ser Ala Val Asp Ala Ala Thr Glu Van Damme et al., 2010
Coiled-coil domain-containing protein 137 Q6PK04 1-289 peptide-Asp108+Ile-peptide P MS Glu Glu Pro Asp Ile Ala Val Pro Van Damme et al., 2009
Coiled-coil domain-containing protein 43 Q96MW1 1-224 peptide-Asp161+Lys-peptide P MS Ile Gly Ser Asp Lys Leu Leu Phe Van Damme et al., 2009
Coiled-coil domain-containing protein 82 Q8N4S0 1-544 peptide-Asp191+Ser-peptide P MS Val Met Cys Asp Ser Asp Glu Ser Van Damme et al., 2009
Coiled-coil domain-containing protein 97 Q96F63 1-343 peptide-Asp313+Asn-peptide P MS Pro Asp Phe Asp Asn Leu Asp Ile Van Damme et al., 2009
Coilin P38432 1-576 Peptide-Asp125+Cys-Peptide N MS Thr Glu Pro Asp Cys Lys Tyr Ser Van Damme et al., 2010
Coilin P38432 1-576 Peptide-Asp176+Asn-Peptide N MS Val Gly Asp Asp Asn Glu Glu Ala Van Damme et al., 2010
collagen alpha-1(VII) chain Q02388 17-2944 peptide-Asp193+Phe-peptide P MS Pro Thr Ser Asp Phe Phe Phe Phe Russo et al., 2018
collagen alpha-1(VII) chain Q02388 17-2944 peptide-Glu332+Leu-peptide P MS Glu Gly Pro Glu Leu Thr Ile Gln Russo et al., 2018
collagen alpha-1(VII) chain Q02388 17-2944 peptide-Asp390+Tyr-peptide P MS Pro Gly Thr Asp Tyr Glu Val Thr Russo et al., 2018
collagen alpha-1(VII) chain Q02388 17-2944 peptide-Asp414+Ala-peptide P MS Ala Arg Thr Asp Ala Ser Val Glu Russo et al., 2018
Condensin complex subunit 1 Q15021 1-1401 Peptide-Asp1334+Asn-Peptide N MS Thr Ala Ser Asp Asn Asp Phe Val Van Damme et al., 2010
Condensin complex subunit 3 Q9BPX3 1-1015 Peptide-Asp910+Ala-Peptide N MS Ala Ala Gln Asp Ala Thr Leu Thr Van Damme et al., 2010
Condensin-2 complex subunit H2 Q6IBW4 1-605 Peptide-Glu442+Glu-Peptide N MS Leu Glu Pro Glu Glu Tyr Met Glu Van Damme et al., 2010
Condensin-2 complex subunit H2 Q8BSP2 1-607 peptide-Glu453+Glu-peptide P MS Val Met Pro Glu Glu Ala Ala Asp Van Damme et al., 2009
Copper homeostasis protein cutC homolog Q9NTM9 1-273 Peptide-Asp33+Ser-Peptide N MS Val Cys Val Asp Ser Val Glu Ser Van Damme et al., 2010
Core histone macro-H2A.1 O75367 2-372 Peptide-Asp172+Ser-Peptide N MS Ala Ser Ala Asp Ser Thr Thr Glu Van Damme et al., 2010
Coronin-7 P57737 1-925 Peptide-Asp830+Thr-Peptide N MS Val Phe Pro Asp Thr Ala Val Ile Van Damme et al., 2010
Crossover junction endonuclease EME1 Q96AY2 1-570 peptide-Arg523+Gln-peptide P MS Asp Lys Glu Arg Gln Asn Leu Leu Van Damme et al., 2009
Cyclin-dependent kinase 12 Q9NYV4 1-1490 Peptide-Asp459+Thr-Peptide N MS Ser Ala Pro Asp Thr Glu Leu Val Van Damme et al., 2010
Cyclin-dependent kinase 13 Q14004 1-1512 Peptide-Ser441+Thr-Peptide N MS Ile Ser Pro Ser Thr Leu Thr Leu Van Damme et al., 2010
cyclin-dependent kinase inhibitor 1 P38936 2-164 peptide-Asp62+Phe-peptide P Leu Glu Gly Asp Phe Ala Trp Glu Pendergraft et al., 2003 19799
Cytoplasmic tRNA 2-thiolation protein 2 Q2VPK5 1-515 Peptide-Asp398+Ala-Peptide N MS Leu Asp Val Asp Ala Ala Asp Ser Van Damme et al., 2010
Cytosolic acyl coenzyme A thioester hydrolase O00154 1-380 Peptide-Asp311+Ala-Peptide N MS Val Leu Val Asp Ala Asp Pro Val Van Damme et al., 2010
Cytosolic Fe-S cluster assembly factor NARFL Q9H6Q4 1-476 Peptide-Asp46+Gly-Peptide N MS Ile Glu Asp Asp Gly Ser Tyr Phe Van Damme et al., 2010
Cytosolic Fe-S cluster assembly factor NARFL Q9H6Q4 2-476 peptide-Asp55+Gly-peptide P MS Ile Asn Gln Asp Gly Gly Thr Arg Van Damme et al., 2009
Cytosolic Fe-S cluster assembly factor NUBP1 P53384 1-320 Peptide-Asp40+Thr-Peptide N MS Ala Thr Pro Asp Thr Ala Ile Glu Van Damme et al., 2010
D-3-phosphoglycerate dehydrogenase O43175 2-533 Peptide-Asp62+Val-Peptide N MS Val Thr Ala Asp Val Ile Asn Ala Van Damme et al., 2010
D-3-phosphoglycerate dehydrogenase O43175 2-533 Peptide-Asp260+Val-Peptide N MS Ala Ala Leu Asp Val Phe Thr Glu Van Damme et al., 2010
D-3-phosphoglycerate dehydrogenase O43175 2-533 peptide-Glu32+Lys-peptide P MS Gln Val Val Glu Lys Gln Asn Leu Van Damme et al., 2009
Death domain-associated protein 6 Q9UER7 1-740 Peptide-Asp414+Ser-Peptide N MS Ala Ser Leu Asp Ser Gly Glu Gly Van Damme et al., 2010
death-inducer obliterator 1 Q8C9B9 1-2256 peptide-Asp807+Ser-peptide N MS Pro Val Ser Asp Ser Glu Glu Gln Van Damme et al., 2009 25765
Death-inducer obliterator 1 Q9BTC0 1-2240 Peptide-Asp106+Ala-Peptide N MS Pro Ala Thr Asp Ala Glu Thr Ala Van Damme et al., 2010
dedicator of cytokinesis protein 2 Q8C3J5 1-1828 peptide-Asp1709+Glu-peptide N MS Val Phe Ala Asp Glu Lys Ala Ala Van Damme et al., 2009 25767
Dehydrogenase/reductase SDR family member 7 Q9Y394 29-339 peptide-Asp327+Ser-peptide P MS Val Asp Ala Asp Ser Ser Tyr Phe Van Damme et al., 2009
Delta-like protein 1 O00548 18-723 Peptide-Arg252+Tyr-Peptide N MS Trp Gln Gly Arg Tyr Cys Asp Glu Van Damme et al., 2010
Density-regulated protein O43583 2-198 Met-Ala-Ala-Asp4+Ile-Peptide N MS Met Ala Ala Asp Ile Ser Glu Ser Van Damme et al., 2010
Density-regulated protein O43583 2-198 Peptide-Ser8+Ser-Peptide N MS Ile Ser Glu Ser Ser Gly Ala Asp Van Damme et al., 2010
Desmoglein-2 Q14126 50-1118 Peptide-Asp304+Asn-Peptide N MS Ile Gly Ser Asp Asn Trp Leu Ala Van Damme et al., 2010
Deubiquitinating protein VCIP135 Q96JH7 1-1222 peptide-Asp974+Val-peptide P MS Ile Gly Pro Asp Val Glu Asp Leu Van Damme et al., 2009
DFFA Q5T6G6 1-331 peptide-Asp224+Thr-peptide P Asp Ala Val Asp Thr Gly Ile Ser Sharif-Askari et al., 2001 3305
Dhx38 DEAH (Asp-Glu-Ala-His) box polypeptide 38 Q8R1J6 1-440 peptide-Asp51+Ala-peptide N MS Ile Gly Met Asp Ala Leu Gln Ile Van Damme et al., 2009 25835
dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial P10515 87-647 peptide-Asp131+Lys-peptide P Val Glu Thr Asp Lys Ala Thr Val Matsumura et al., 2002 19912
dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial P10515 87-647 peptide-Asp258+Lys-peptide P Ile Glu Thr Asp Lys Ala Thr Ile Matsumura et al., 2002
dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial P10515 87-647 peptide-Asp381+Gly-peptide P Thr Gly Pro Asp Gly Arg Ile Thr Matsumura et al., 2002
DIS3-like exonuclease 2 Q8CI75 1-870 peptide-Glu166+Ala-peptide P MS Val Ile Ile Glu Ala Gln Phe Asp Van Damme et al., 2009
DJ-1 putative peptidase Q99497 1-189 Peptide-Ala11+Lys-Peptide N MS Val Ile Leu Ala Lys Gly Ala Glu Van Damme et al., 2010
DJ-1 putative peptidase Q99497 1-189 Peptide-Gly37+Leu-Peptide N MS Thr Val Ala Gly Leu Ala Gly Lys Van Damme et al., 2010
DJ-1 putative peptidase Q99497 1-189 Peptide-Lys12+Gly-Peptide N MS Ile Leu Ala Lys Gly Ala Glu Glu Van Damme et al., 2010
DJ-1 putative peptidase Q99497 1-189 Peptide-Ser47+Arg-Peptide N MS Val Gln Cys Ser Arg Asp Val Val Van Damme et al., 2010
DNA (cytosine-5)-methyltransferase 1 P13864 1-1620 peptide-Glu207+Ser-peptide P MS Val Asp Thr Glu Ser Gly Ala Ala Van Damme et al., 2009
DNA (cytosine-5)-methyltransferase 3B Q9UBC3 1-853 Peptide-Asp208+Ser-Peptide N MS Val Glu Ala Asp Ser Gly Asp Gly Van Damme et al., 2010
DNA excision repair protein ERCC-6-like Q2NKX8 1-1250 peptide-Asp353+Ala-peptide P MS Pro Asp Val Asp Ala Ile Cys Glu Van Damme et al., 2009
DNA fragmentation factor subunit alpha O00273 1-331 Peptide-Asp6+Ala-Peptide N MS Val Thr Gly Asp Ala Gly Val Pro Plasman et al., 2011
DNA fragmentation factor subunit alpha O54786 1-331 peptide-Glu109+Ser-peptide P MS Val Ser Gln Glu Ser Phe Glu Ala Van Damme et al., 2009
DNA helicase B Q6KAT5 1-1074 peptide-Asp993+Glu-peptide N MS Val Asp Thr Asp Glu Glu Ser Ala Van Damme et al., 2009 25829
DNA helicase B Q6NVF4 1-1074 peptide-Asp993+Glu-peptide P MS Val Asp Thr Asp Glu Glu Ser Ala Van Damme et al., 2009
DNA ligase 3 P49916 1-1009 Peptide-Asp844+Glu-Peptide N MS Val Ala Gly Asp Glu Gly Ser Ser Van Damme et al., 2010
DNA methyltransferase 1-associated protein 1 Q9NPF5 1-467 peptide-Asp19+Ala-peptide P MS Pro Glu Gly Asp Ala Ala Ser Gly Van Damme et al., 2009
DNA mismatch repair protein Mlh1 P40692 1-756 Peptide-Asp450+Thr-Peptide N MS Leu Glu Gly Asp Thr Thr Lys Gly Van Damme et al., 2010
DNA mismatch repair protein Msh6 P54276 1-1358 peptide-Asp284+Ser-peptide N MS Gly Val Gly Asp Ser Asp Ser Glu Van Damme et al., 2009 25768
DNA mismatch repair protein Msh6 P54276 1-1358 peptide-Asp931+Ser-peptide N MS Ala Gly Phe Asp Ser Asp Tyr Asp Van Damme et al., 2009 25769
DNA mismatch repair protein Msh6 P52701 1-1360 Peptide-Asp47+Ala-Peptide N MS Pro Gly Gly Asp Ala Ala Trp Ser Van Damme et al., 2010
DNA mismatch repair protein Msh6 P52701 1-1360 Peptide-Asp934+Ser-Peptide N MS Ala Gly Phe Asp Ser Asp Tyr Asp Van Damme et al., 2010
DNA polymerase alpha catalytic subunit P09884 1-1462 Peptide-Asp102+Ala-Peptide N MS Leu Glu Asp Asp Ala Leu Asp Ala Van Damme et al., 2010
DNA polymerase alpha catalytic subunit P09884 1-1462 Peptide-Glu236+Ser-Peptide N MS Val Gln Val Glu Ser Thr Glu Glu Van Damme et al., 2010
DNA polymerase delta subunit 2 P49005 1-469 peptide-Asp130+Asp-peptide P MS Ile His Pro Asp Asp Glu Leu Val Van Damme et al., 2009
DNA polymerase delta subunit 4 Q9CWP8 1-107 peptide-Asp35+Thr-peptide N MS Leu Gly Glu Asp Thr Gln Ser Leu Van Damme et al., 2009 25770
DNA polymerase eta Q9Y253 1-713 peptide-Asp140+Leu-peptide P MS Ile Ser Ala Asp Leu Leu Pro Ser Van Damme et al., 2009
DNA replication complex GINS protein SLD5 Q9BRT9 1-223 Peptide-Gln221+Leu-Ile N MS Gly Ala Val Gln Leu Ile - - Van Damme et al., 2010
DNA replication licensing factor MCM2 P97310 1-904 peptide-Asp88+Val-peptide N MS Pro Glu Leu Asp Val Tyr Glu Ala Van Damme et al., 2009 22233
DNA replication licensing factor MCM2 P49736 1-904 peptide-Asp88+Ala-peptide P MS Pro Glu Leu Asp Ala Tyr Glu Ala Van Damme et al., 2009 22232
DNA replication licensing factor MCM2 P49736 2-904 Peptide-Glu93+Gly-Peptide N MS Tyr Glu Ala Glu Gly Leu Ala Leu Van Damme et al., 2010
DNA replication licensing factor MCM2 P49736 2-904 Peptide-Asp98+Asp-Peptide N MS Leu Ala Leu Asp Asp Glu Asp Val Van Damme et al., 2010
DNA replication licensing factor MCM3 P25206 2-812 peptide-Asp21+Phe-peptide N MS Asp Tyr Leu Asp Phe Leu Asp Asp Van Damme et al., 2009 25775
DNA replication licensing factor MCM3 P25206 2-812 peptide-Asp516+Ala-peptide N MS Gln Asp Gly Asp Ala Leu Pro Leu Van Damme et al., 2009 25776
DNA replication licensing factor MCM3 P25206 2-812 peptide-Asp525+Ile-peptide N MS Ser Ser Val Asp Ile Leu Ala Thr Van Damme et al., 2009 25777
DNA replication licensing factor MCM3 P25206 2-812 peptide-Asp737+Ser-peptide N MS Glu Thr Gln Asp Ser Gln Lys Val Van Damme et al., 2009 25778
DNA replication licensing factor MCM3 P25205 2-808 peptide-Asp21+Phe-peptide P MS Asp Tyr Leu Asp Phe Leu Asp Asp Van Damme et al., 2009
DNA replication licensing factor MCM4 P33991 1-863 Peptide-Asp85+Val-Peptide N MS Leu Asp Phe Asp Val Ser Ser Pro Van Damme et al., 2010
DNA replication licensing factor MCM4 P33991 2-863 peptide-Asp187+Ile-peptide P MS Val Gly Ile Asp Ile Thr Glu Pro Van Damme et al., 2009
DNA replication licensing factor MCM5 P49718 1-733 peptide-Asp13+Ser-peptide N MS Phe Tyr Ser Asp Ser Phe Gly Gly Van Damme et al., 2009 22235
DNA replication licensing factor MCM5 P33992 1-734 Peptide-Asp438+Gly-Peptide N MS Val Leu Ala Asp Gly Gly Val Val Van Damme et al., 2010
DNA replication licensing factor MCM5 P33992 1-734 peptide-Asp13+Ser-peptide P MS Phe Tyr Ser Asp Ser Phe Gly Gly Van Damme et al., 2009
DNA replication licensing factor MCM6 Q14566 1-821 Peptide-Asp253+Val-Peptide N MS Val Val Pro Asp Val Ser Lys Leu Van Damme et al., 2010
DNA replication licensing factor MCM6 Q14566 1-821 Peptide-Asp453+Asn-Peptide N MS Met Leu Ala Asp Asn Gly Val Cys Van Damme et al., 2010
DNA replication licensing factor MCM7 P33993 2-719 Peptide-Asp438+Gln-Peptide N MS Val Leu Ala Asp Gln Gly Val Cys Van Damme et al., 2010
DNA topoisomerase 1 P11387 1-765 peptide-Asp15+Phe-peptide P Ile Glu Ala Asp Phe Arg Leu Asn Casciola-Rosen et al., 1999 18006
DNA topoisomerase 1 Q04750 1-767 peptide-Asp125+Gly-peptide N MS Pro Glu Asp Asp Gly Tyr Phe Ala Van Damme et al., 2009 22177
DNA topoisomerase 1 P11387 2-765 Peptide-Asp528+Phe-Peptide N MS Val Glu Phe Asp Phe Leu Gly Lys Van Damme et al., 2010
DNA-(apurinic or apyrimidinic site) lyase P27695 2-318 Peptide-Asp13+Gly-Peptide N MS Val Ala Glu Asp Gly Asp Glu Leu Van Damme et al., 2010
DNA-binding protein SMUBP-2 P38935 2-993 peptide-Glu649+Asn-peptide P MS Ile Val Pro Glu Asn Tyr Ser His Van Damme et al., 2009
DNA-dependent protein kinase catalytic subunit P78527 1-4128 peptide-Asp2713+Asn-peptide P MU Asp Glu Val Asp Asn Lys Val Lys Andrade et al., 1998 3301
DNA-dependent protein kinase catalytic subunit P78527 1-4128 peptide-Asp2699+Phe-peptide P MU Val Gly Pro Asp Phe Gly Lys Lys Andrade et al., 1998 3294
DNA-dependent protein kinase catalytic subunit P78527 1-4128 peptide-Asp3211+Gly-peptide P Val Asp Gln Asp Gly Asp Pro Ser Andrade et al., 1998 3291
DNA-dependent protein kinase catalytic subunit P78527 2-4128 Peptide-Asp2766+Ala-Peptide N MS Met Lys Gln Asp Ala Gln Val Val Van Damme et al., 2010
DNA-dependent protein kinase catalytic subunit P78527 2-4128 Peptide-Asn3204+Ser-Peptide N MS Pro Glu Asp Asn Ser Met Asn Val Van Damme et al., 2010
DNA-dependent protein kinase catalytic subunit P78527 2-4128 Peptide-Asp4062+Glu-Peptide N MS Ile Thr Cys Asp Glu Leu Leu Leu Van Damme et al., 2010
DNA-directed RNA polymerase I subunit RPA1 O95602 1-1720 peptide-Asp448+Met-peptide P Ile Cys Pro Asp Met Tyr Ile Asn Casciola-Rosen et al., 1999 27180
DNA-directed RNA polymerase I subunit RPA1 O95602 1-1720 Peptide-Glu1404+Ala-Peptide N MS Val Asp Ala Glu Ala Glu Glu Gly Van Damme et al., 2010
DNA-directed RNA polymerase I subunit RPA1 O35134 1-1717 peptide-Glu1411+Ala-peptide P MS Val Asp Ala Glu Ala Glu Glu Gly Van Damme et al., 2009
DNA-directed RNA polymerase I subunit RPA2 Q9H9Y6 1-1135 peptide-Arg706+Ser-peptide P MS Tyr Gln Asp Arg Ser Asp Asn Lys Van Damme et al., 2009
DNA-directed RNA polymerase I subunit RPA34 O15446 1-510 Peptide-Glu400+Thr-Peptide N MS Val Glu Pro Glu Thr Glu Val Val Van Damme et al., 2010
DNA-directed RNA polymerase I subunit RPA34 O15446 1-510 peptide-Asp39+Thr-peptide P MS Thr Gly Pro Asp Thr Glu Leu Trp Van Damme et al., 2009
DNA-directed RNA polymerase I subunit RPA34 O15446 1-510 peptide-Met201+Ala-peptide P MS Glu Val Asp Met Ala Leu Gly Ser Van Damme et al., 2009
DNA-directed RNA polymerase I subunit RPA49 Q9GZS1 1-481 Peptide-Leu184+Ala-Peptide N MS Glu Ser Glu Leu Ala Leu Glu Ser Van Damme et al., 2010
DNA-directed RNA polymerase II subunit RPB1 P24928 1-1970 peptide-Asp370+Pro-peptide P Ile Thr Pro Asp Pro Asn Leu Ser Casciola-Rosen et al., 1999
DNA-directed RNA polymerase III subunit RPC3 Q9BUI4 1-534 peptide-Asp206+Glu-peptide P MS Arg Ser Ser Asp Glu Asp Ala Ala Van Damme et al., 2009
DNA-directed RNA polymerase III subunit RPC4 P05423 1-398 Peptide-Asp161+Asp-Peptide N MS Leu Glu Lys Asp Asp Phe Leu Asp Van Damme et al., 2010
DNA-directed RNA polymerases I and III subunit RPAC1 O15160 2-346 peptide-Glu248+Ala-peptide P MS Val Glu Gly Glu Ala Ala Glu Glu Van Damme et al., 2009
DNA-repair protein XRCC4 Q13426 1-336 peptide-Asp254+Asp-peptide P Val Ser Lys Asp Asp Ser Ile Ile Lee et al., 2002 19468
DnaJ homolog subfamily A member 2 O60884 1-409 Peptide-Glu367+Thr-Peptide N MS Ile Ile Gly Glu Thr Glu Glu Val Van Damme et al., 2010
DnaJ homolog subfamily A member 2 Q9QYJ0 1-409 peptide-Glu367+Thr-peptide P MS Val Ile Gly Glu Thr Glu Glu Val Van Damme et al., 2009
DnaJ homolog subfamily B member 6 O75190 2-326 peptide-Asp113+Phe-peptide P MS Phe Ser Phe Asp Phe Phe Glu Asp Van Damme et al., 2009
DnaJ homolog subfamily C member 2 Q99543 2-621 Peptide-Asp134+Asn-Peptide N MS Lys Glu Gly Asp Asn Asp Tyr Phe Van Damme et al., 2010
DNAJ homolog subfamily C member 7 Q9QYI3 1-494 peptide-Asp8+Val-peptide N MS Ala Glu Cys Asp Val Val Met Ala Van Damme et al., 2009 22207
DnaJ homolog subfamily C member 7 Q99615 2-494 peptide-Asp8+Val-peptide P MS Ala Glu Cys Asp Val Val Met Ala Van Damme et al., 2009
DnaJ homolog subfamily C member 7 Q9QYI3 2-494 peptide-Glu17+Leu-peptide P MS Thr Glu Pro Glu Leu Leu Glu Asp Van Damme et al., 2009
DNAJ homolog subfamily C member 9 Q91WN1 1-259 peptide-Asp214+Asn-peptide N MS Glu Gly Val Asp Asn Leu Lys Ala Van Damme et al., 2009 25779
DnaJ homolog subfamily C member 9 Q8WXX5 1-260 Peptide-Asp210+Glu-Peptide N MS Leu Gly Leu Asp Glu Gly Val Asp Van Damme et al., 2010
Docking protein 1 Q99704 1-481 Peptide-Asp312+Ser-Peptide N MS Pro Ser Gln Asp Ser Leu Tyr Ser Van Damme et al., 2010
double-strand break repair protein MRE11A Q61216 1-706 peptide-Asp646+Asp-peptide N MS Ile Glu Val Asp Asp Ser Asp Glu Van Damme et al., 2009 22237
double-strand break repair protein MRE11A P49959 1-708 peptide-Asp647+Glu-peptide P MS Ile Glu Val Asp Glu Ser Asp Val Van Damme et al., 2009 22236
Double-strand break repair protein MRE11A P49959 1-708 Peptide-Asp543+Asp-Peptide N MS Phe Ser Ala Asp Asp Leu Met Ser Van Damme et al., 2010
Double-stranded RNA-binding protein Staufen homolog 2 Q9NUL3 1-570 Peptide-Asp418+Val-Peptide N MS Leu Ser Pro Asp Val Tyr Gln Glu Van Damme et al., 2010
Double-stranded RNA-specific adenosine deaminase P55265 1-1226 Peptide-Glu700+Ser-Peptide N MS Met Ile Ser Glu Ser Leu Asp Asn Van Damme et al., 2010
Double-stranded RNA-specific adenosine deaminase P55265 1-1226 peptide-Asp703+Asn-peptide P MS Glu Ser Leu Asp Asn Leu Glu Ser Van Damme et al., 2009
DTW domain-containing protein 2 Q8NBA8 1-298 Peptide-Asp48+Asp-Peptide N MS Ala Glu Ala Asp Asp Asp Ser Ala Van Damme et al., 2010
Dual specificity mitogen-activated protein kinase kinase 3 P46734 1-347 Peptide-Asp62+Asp-Peptide N MS Val Glu Ala Asp Asp Leu Val Thr Van Damme et al., 2010
dual specificity mitogen-activated protein kinase kinase 6 P70236 1-334 peptide-Asp51+Asp-peptide N MS Val Lys Ala Asp Asp Leu Glu Pro Van Damme et al., 2009 25785
dynactin subunit 2 Q99KJ8 2-402 peptide-Asp161+Ala-peptide N MS Leu Gly Pro Asp Ala Ala Ile Asn Van Damme et al., 2009 22206
Dynactin subunit 2 Q13561 2-401 peptide-Asp161+Ala-peptide P MS Leu Gly Pro Asp Ala Ala Ile Asn Van Damme et al., 2009
Dynactin subunit 6 O00399 1-190 peptide-Gln59+Ala-peptide P MS Ile Glu Glu Gln Ala Leu Ile Ile Van Damme et al., 2009
Dynein light chain 1, cytoplasmic P63167 1-89 Peptide-Glu16+Met-Peptide N MS Met Ser Glu Glu Met Gln Gln Asp Van Damme et al., 2010
Dynein light chain 1, cytoplasmic P63167 1-89 Peptide-Asp20+Ser-Peptide N MS Met Gln Gln Asp Ser Val Glu Cys Van Damme et al., 2010
Dystonin Q03001-8 1-5171 Peptide-Asp4862+Ala-Peptide N MS Pro Ile Thr Asp Ala Asp Lys Ile Van Damme et al., 2010
Dystonin Q03001-8 1-5171 Peptide-Asp4864+Lys-Peptide N MS Thr Asp Ala Asp Lys Ile Glu Asp Van Damme et al., 2010
E3 SUMO-protein ligase RanBP2 Q9ERU9 1-3053 peptide-Asp2131+Glu-peptide N MS Val Gly Thr Asp Glu Glu Ser Asp Van Damme et al., 2009 25786
E3 SUMO-protein ligase RanBP2 Q9ERU9 1-3053 peptide-Asp2577+Thr-peptide N MS Val Cys Ser Asp Thr Asp Glu Asp Van Damme et al., 2009 25787
E3 SUMO-protein ligase RanBP2 P49792 1-3224 Peptide-Asp2389+Met-Peptide N MS Ile Thr Pro Asp Met Thr Leu Gln Van Damme et al., 2010
E3 ubiquitin-protein ligase ARIH1 Q9Y4X5 1-557 Peptide-Asp516+Ser-Peptide N MS Ile Ser Gln Asp Ser Leu Gln Asp Van Damme et al., 2010
E3 ubiquitin-protein ligase BRE1A Q5VTR2 1-975 Peptide-Asp135+Ser-Peptide N MS Pro Glu Pro Asp Ser Asp Ser Asn Van Damme et al., 2010
E3 ubiquitin-protein ligase BRE1B O75150 1-1001 Peptide-Asp930+Ala-Peptide N MS Val Tyr Ala Asp Ala Asp Glu Ile Van Damme et al., 2010
E3 ubiquitin-protein ligase HUWE1 Q7TMY8 1-4377 peptide-Asp3774+Ala-peptide N MS Ala Glu Ala Asp Ala Ile Ile Gln Van Damme et al., 2009 22217
E3 ubiquitin-protein ligase HUWE1 Q7Z6Z7 1-4374 Peptide-Asp2380+Val-Peptide N MS Ser Gln Glu Asp Val Leu Met Asp Van Damme et al., 2010
E3 ubiquitin-protein ligase HUWE1 Q7Z6Z7 1-4374 Peptide-Asp2384+Glu-Peptide N MS Val Leu Met Asp Glu Ala Pro Ser Van Damme et al., 2010
E3 ubiquitin-protein ligase HUWE1 Q7Z6Z7 1-4374 Peptide-Glu3020+Phe-Peptide N MS Val Ser Pro Glu Phe Leu Ala Ala Van Damme et al., 2010
E3 ubiquitin-protein ligase HUWE1 Q7Z6Z7 1-4374 Peptide-Asp3664+Gly-Peptide N MS Leu Ser Pro Asp Gly Leu Pro Glu Van Damme et al., 2010
E3 ubiquitin-protein ligase HUWE1 Q7Z6Z7 1-4374 Peptide-Asp3773+Ala-Peptide N MS Ala Glu Ala Asp Ala Ile Ile Gln Van Damme et al., 2010
E3 ubiquitin-protein ligase HUWE1 Q7Z6Z7 1-4374 Peptide-Thr3793+Ser-Peptide N MS Gln Ala Ala Thr Ser Glu Ser Ser Van Damme et al., 2010
E3 ubiquitin-protein ligase HUWE1 Q7Z6Z7 1-4374 Peptide-Asp2285+Ser-Peptide N MS Ala Ser Gln Asp Ser Ser Ser Asn Van Damme et al., 2010
E3 ubiquitin-protein ligase HUWE1 Q7TMY8 1-4377 peptide-Glu2349+Asp-peptide P MS Asn Glu Leu Glu Asp Leu Ile Asp Van Damme et al., 2009
E3 ubiquitin-protein ligase HUWE1 Q7Z6Z7 1-4374 peptide-Asp1015+Gly-peptide P MS Ile Gly Leu Asp Gly Asp Thr Leu Van Damme et al., 2009
E3 ubiquitin-protein ligase HUWE1 Q7Z6Z7 1-4374 peptide-Asp1982+Met-peptide P MS Leu Leu Gln Asp Met Gly Asp Asp Van Damme et al., 2009
E3 ubiquitin-protein ligase HUWE1 Q7Z6Z7 1-4374 peptide-Asp2017+Gly-peptide P MS Phe Ala Ala Asp Gly Ala Ser Thr Van Damme et al., 2009
E3 ubiquitin-protein ligase HUWE1 Q7Z6Z7 1-4374 peptide-Glu2345+Asn-peptide P MS Met Gln Val Glu Asn Glu Leu Glu Van Damme et al., 2009
E3 ubiquitin-protein ligase HUWE1 Q7Z6Z7 1-4374 peptide-Glu2349+Asp-peptide P MS Asn Glu Leu Glu Asp Leu Ile Asp Van Damme et al., 2009
E3 ubiquitin-protein ligase HUWE1 Q7Z6Z7 1-4374 peptide-Asp2588+Ile-peptide P MS Ala Ala Ala Asp Ile Leu Gln Leu Van Damme et al., 2009
E3 ubiquitin-protein ligase listerin O94822 1-1766 Peptide-Asp750+Cys-Peptide N MS Asn Leu Ala Asp Cys Leu Cys Asn Van Damme et al., 2010
E3 ubiquitin-protein ligase MIB1 Q86YT6 1-1006 Peptide-Asp812+Ser-Peptide N MS Ile Ser Asn Asp Ser Glu Thr Leu Van Damme et al., 2010
E3 ubiquitin-protein ligase Praja-2 O43164 2-708 Peptide-Asp358+Asp-Peptide N MS Ser Gly Ser Asp Asp Leu Leu Ile Van Damme et al., 2010
E3 ubiquitin-protein ligase RING1 Q06587 1-406 Peptide-Arg88+Lys-Peptide N MS Pro Thr Cys Arg Lys Lys Leu Val Van Damme et al., 2010
E3 ubiquitin-protein ligase RNF220 Q5VTB9 1-566 Peptide-Asp486+Ser-Peptide N MS Ile Thr Glu Asp Ser Ala Val Thr Van Damme et al., 2010
E3 ubiquitin-protein ligase TRIM56 Q9BRZ2 1-755 Peptide-Asp43+Cys-Peptide N MS Tyr Cys Gln Asp Cys Leu Ala Gln Van Damme et al., 2010
E3 ubiquitin-protein ligase UBR4 Q5T4S7 1-5183 Peptide-Asp4757+Glu-Peptide N MS Val Ser Ser Asp Glu Gly Ile Gly Van Damme et al., 2010
E3 ubiquitin-protein ligase UBR4 Q5T4S7 1-5183 Peptide-Asp4393+Cys-Peptide N MS Ile Cys Gln Asp Cys Asp Leu Val Van Damme et al., 2010
E3 ubiquitin-protein ligase UBR4 Q5T4S7 1-5183 peptide-Gln214+Thr-peptide P MS Ile Ser Thr Gln Thr Leu Val Glu Van Damme et al., 2009
E3 ubiquitin-protein ligase UBR4 Q5T4S7 1-5183 peptide-Glu2896+Ser-peptide P MS Val Gly Ser Glu Ser Gly Gly Ser Van Damme et al., 2009
E3 ubiquitin-protein ligase UBR5 O95071 1-2799 Peptide-Glu1687+Thr-Peptide N MS Ile Glu Gln Glu Thr Phe Met Leu Van Damme et al., 2010
E3 ubiquitin-protein ligase UBR5 O95071 1-2799 Peptide-Asp2459+Ser-Peptide N MS Asn Gly Ala Asp Ser Ile Leu Asp Van Damme et al., 2010
E3 ubiquitin-protein ligase UBR5 O95071 1-2799 peptide-Asp619+Ala-peptide P MS Thr Cys Ser Asp Ala Ser Ser Ile Van Damme et al., 2009
E3 ubiquitin-protein ligase UBR5 O95071 1-2799 peptide-Asp2491+Leu-peptide P MS Val Asp Met Asp Leu Asp Asp Thr Van Damme et al., 2009
Early E2A DNA-binding protein P03265 1-529 peptide-Asp62+Ala-peptide P MU Ser Ser Gln Asp Ala Leu Val Pro Andrade et al., 2007
Early E2A DNA-binding protein P03265 1-529 peptide-Asp106+Ser-peptide P MU Val Ile Val Asp Ser Glu Glu Glu Andrade et al., 2007
Early E2A DNA-binding protein P03265 1-529 peptide-Asp300+Val-peptide P MU Ile Glu Met Asp Val Thr Ser Glu Andrade et al., 2007
Early E2A DNA-binding protein P03265 1-529 peptide-Asp429+Leu-peptide P MU Leu Asp Ala Asp Leu Ile Ser Asp Andrade et al., 2007
Early E2A DNA-binding protein P03265 1-529 peptide-Asp433+Lys-peptide P MU Leu Ile Ser Asp Lys Ser Val Leu Andrade et al., 2007
ELKS/Rab6-interacting/CAST family member 1 Q8IUD2 1-1116 Peptide-Asp121+Thr-Peptide N MS Val Ala Ser Asp Thr Ile Ala Phe Van Damme et al., 2010
elongation factor 1-alpha 1 P10126 1-462 peptide-Asp252+Val-peptide N MS Pro Leu Gln Asp Val Tyr Lys Ile Van Damme et al., 2009 22209
elongation factor 1-alpha 1 P68104 1-462 peptide-Asp398+Ala-peptide P MS Lys Ser Gly Asp Ala Ala Ile Val Van Damme et al., 2009 22208
Elongation factor 1-alpha 1 P68104 1-462 Peptide-Glu413+Ser-Peptide N MS Met Cys Val Glu Ser Phe Ser Asp Van Damme et al., 2010
Elongation factor 1-alpha 1 P10126 1-462 peptide-Asp398+Ala-peptide P MS Lys Ser Gly Asp Ala Ala Ile Val Van Damme et al., 2009
Elongation factor 1-alpha 1 P10126 1-462 peptide-Glu413+Ser-peptide P MS Met Cys Val Glu Ser Phe Ser Asp Van Damme et al., 2009
Elongation factor 1-alpha 1 P68104 1-462 peptide-Asp252+Val-peptide P MS Pro Leu Gln Asp Val Tyr Lys Ile Van Damme et al., 2009
Elongation factor 1-alpha 2 P62631 1-463 peptide-Asp252+Val-peptide P MS Pro Leu Gln Asp Val Tyr Lys Ile Van Damme et al., 2009
Elongation factor 1-alpha 2 Q05639 1-463 peptide-Asp252+Val-peptide P MS Pro Leu Gln Asp Val Tyr Lys Ile Van Damme et al., 2009
Elongation factor 1-beta P24534 2-225 peptide-Asp201+Met-peptide P MS Val Gly Thr Asp Met Leu Glu Glu Van Damme et al., 2009
Elongation factor 1-delta P29692 2-281 Peptide-Asp257+Leu-Peptide N MS Val Gly Thr Asp Leu Leu Glu Glu Van Damme et al., 2010
Elongation factor 2 P13639 2-858 Peptide-Glu540+Ser-Peptide N MS Ile Ile Glu Glu Ser Gly Glu His Van Damme et al., 2010
Elongation factor 2 P13639 2-858 peptide-Ser541+Gly-peptide P MS Ile Glu Glu Ser Gly Glu His Ile Van Damme et al., 2009
Elongation factor 2 P13639 2-858 peptide-Asp611+Gly-peptide P MS Pro Phe Pro Asp Gly Leu Ala Glu Van Damme et al., 2009
Endophilin-A2 Q99961 1-368 Peptide-Asp112+Ala-Peptide N MS Asn Phe Gly Asp Ala Leu Leu Asp Van Damme et al., 2010
endoplasmin P08113 22-802 peptide-Asp28+Gly-peptide N MS Val Asp Val Asp Gly Thr Val Glu Van Damme et al., 2009 22211
Endoplasmin P14625 22-803 Peptide-Asp752+Ala-Peptide N MS Ile Asp Pro Asp Ala Lys Val Glu Van Damme et al., 2010
Endoplasmin P14625 22-803 peptide-Asp28+Gly-peptide P MS Val Asp Val Asp Gly Thr Val Glu Van Damme et al., 2009
enhancer of mRNA-decapping protein 3 Q8K2D3 1-508 peptide-Asp214+Lys-peptide N MS Ala Leu Phe Asp Lys Ala Ala Val Van Damme et al., 2009 25788
Enhancer of mRNA-decapping protein 4 Q6P2E9 2-1401 Peptide-Asp767+Ser-Peptide N MS Leu Glu Pro Asp Ser Met Ala Ser Van Damme et al., 2010
Enhancer of mRNA-decapping protein 4 Q6P2E9 1-1401 peptide-Asp57+Ser-peptide P MS Cys Ser Gly Asp Ser Thr Ser Ala Van Damme et al., 2009
eno1 enolase 1, alpha non-neuron P17182 2-434 peptide-Asp318+Asp-peptide N MS Val Val Gly Asp Asp Leu Thr Val Van Damme et al., 2009 25742
Ephrin type-A receptor 3 P29320 21-983 peptide-Asp149+Glu-peptide P MS Ile Ala Ala Asp Glu Ser Phe Thr Van Damme et al., 2009
Ephrin type-A receptor 6 Q9UF33 23-1035 peptide-Asp153+Glu-peptide P MS Ile Ala Ala Asp Glu Ser Phe Thr Van Damme et al., 2009
Epsin-1 Q9Y6I3 1-576 peptide-Asp485+Ser-peptide P MS Val Asp Leu Asp Ser Leu Val Ser Van Damme et al., 2009
ESF1 homolog Q9H501 1-851 Peptide-Asp535+Phe-Peptide N MS Leu Asp Met Asp Phe Gln Ala Tyr Van Damme et al., 2010
Eukaryotic initiation factor 4A-III P38919 2-411 Peptide-Glu29+Thr-Peptide N MS Val Glu Phe Glu Thr Ser Glu Glu Van Damme et al., 2010
Eukaryotic initiation factor 4A-III Q91VC3 2-411 peptide-Glu29+Thr-peptide P MS Val Glu Phe Glu Thr Ser Glu Glu Van Damme et al., 2009
Eukaryotic peptide chain release factor GTP-binding subunit ERF3A P15170 1-499 Peptide-Asp354+Thr-Peptide N MS Val Glu Thr Asp Thr Val Ala Pro Van Damme et al., 2010
Eukaryotic translation initiation factor 1A, Y-chromosomal O14602 2-144 Peptide-Asp132+Asp-Peptide N MS Ile Gln Phe Asp Asp Ile Gly Asp Van Damme et al., 2010
Eukaryotic translation initiation factor 2D P41214 1-584 Peptide-Asp194+Ser-Peptide N MS Leu Ala Leu Asp Ser Ala Asp Leu Van Damme et al., 2010
Eukaryotic translation initiation factor 2D P41214 1-584 Peptide-Asp208+Ser-Peptide N MS Val Gln Met Asp Ser Thr Leu Gln Van Damme et al., 2010
eukaryotic translation initiation factor 3 subunit A P23116 2-1344 peptide-Asp667+Phe-peptide N MS Leu Asp Pro Asp Phe Ile Met Ala Van Damme et al., 2009 25791
Eukaryotic translation initiation factor 3 subunit A Q14152 2-1382 peptide-Asp667+Phe-peptide P MS Leu Asp Pro Asp Phe Ile Met Ala Van Damme et al., 2009
Eukaryotic translation initiation factor 3 subunit C Q99613 1-913 Peptide-Ala194+Thr-Peptide N MS Val Ser Ala Ala Thr Phe Leu Lys Van Damme et al., 2010
Eukaryotic translation initiation factor 3 subunit E P60228 2-445 peptide-Asp441+Ser-peptide P MS Ala Thr Gln Asp Ser Gly Phe Tyr Van Damme et al., 2009
Eukaryotic translation initiation factor 3 subunit G O75821 2-320 Peptide-Asp306+His-Peptide N MS Phe Gly Tyr Asp His Leu Ile Leu Van Damme et al., 2010
eukaryotic translation initiation factor 3 subunit J Q66JS6 2-263 peptide-Asp22+Thr-peptide N MS Trp Asp Ala Asp Thr Phe Ser Met Van Damme et al., 2009 25790
Eukaryotic translation initiation factor 3 subunit J O75822 2-258 Peptide-Asp17+Ala-Peptide N MS Trp Asp Ala Asp Ala Phe Ser Val Van Damme et al., 2010
Eukaryotic translation initiation factor 3 subunit J O75822 2-258 Peptide-Glu68+Val-Peptide N MS Val Lys Pro Glu Val Lys Ile Ser Van Damme et al., 2010
Eukaryotic translation initiation factor 3 subunit J O75822 2-258 Peptide-Asp37+Arg-Peptide N MS Ala Gly Gly Asp Arg Trp Glu Gly Van Damme et al., 2010
Eukaryotic translation initiation factor 3 subunit J O75822 2-258 peptide-Asn139+Asn-peptide P MS Phe Gly Val Asn Asn Ala Val Tyr Van Damme et al., 2009
Eukaryotic translation initiation factor 3 subunit J-A Q3UGC7 2-261 peptide-Asp20+Thr-peptide P MS Trp Asp Ala Asp Thr Phe Ser Met Van Damme et al., 2009
Eukaryotic translation initiation factor 3 subunit M Q7L2H7 2-374 Peptide-Asp306+Asp-Peptide N MS Ile Gly Ala Asp Asp Val Glu Ala Van Damme et al., 2010
Eukaryotic translation initiation factor 4 gamma 1 Q04637 1-1599 Peptide-Asp665+Phe-Peptide N MS Cys Gly Pro Asp Phe Thr Pro Ser Van Damme et al., 2010
Eukaryotic translation initiation factor 4 gamma 1 Q04637 1-1599 peptide-Asp532+Ala-peptide P MS Asp Leu Leu Asp Ala Phe Lys Glu Van Damme et al., 2009
eukaryotic translation initiation factor 4 gamma 2 Q62448 1-906 peptide-Asp329+Ala-peptide N MS Ile Arg Gln Asp Ala Val Lys Asp Van Damme et al., 2009 25792
Eukaryotic translation initiation factor 4 gamma 3 O43432 1-1585 Peptide-Asp478+Gly-Peptide N MS Val Glu Ala Asp Gly Gln Thr Glu Van Damme et al., 2010
Eukaryotic translation initiation factor 4B P23588 1-611 Peptide-Asp206+Ser-Peptide N MS Pro Ala Thr Asp Ser Phe Asp Asp Van Damme et al., 2010
eukaryotic translation initiation factor 4H Q9WUK2 2-248 peptide-Asp57+Ile-peptide N MS Val Gln Gly Asp Ile Asp Ala Ile Van Damme et al., 2009 25794
eukaryotic translation initiation factor 5A-1 P63242 2-154 peptide-Asp11+Ala-peptide N MS Glu Thr Gly Asp Ala Gly Ala Ser Van Damme et al., 2009 22219
Eukaryotic translation initiation factor 5A-1 P63241 2-154 Peptide-Glu8+Thr-Peptide N MS Leu Asp Phe Glu Thr Gly Asp Ala Van Damme et al., 2010
Eukaryotic translation initiation factor 5A-1 P63241 2-154 peptide-Asp11+Ala-peptide P MS Glu Thr Gly Asp Ala Gly Ala Ser Van Damme et al., 2009
Eukaryotic translation initiation factor 5A-1 P63241 2-154 peptide-Asp96+Gly-peptide P MS Gly Ile Gln Asp Gly Tyr Leu Ser Van Damme et al., 2009
Eukaryotic translation initiation factor 5A-1 P63241 2-154 peptide-Asp104+Ser-peptide P MS Leu Leu Gln Asp Ser Gly Glu Val Van Damme et al., 2009
Eukaryotic translation initiation factor 5A-1 P63242 2-154 peptide-Glu8+Thr-peptide P MS Leu Asp Phe Glu Thr Gly Asp Ala Van Damme et al., 2009
Eukaryotic translation initiation factor 5A-1-like Q6IS14 1-154 peptide-Glu8+Thr-peptide P MS Leu Asp Phe Glu Thr Gly Asp Ala Van Damme et al., 2009
Eukaryotic translation initiation factor 5A-1-like Q6IS14 1-154 peptide-Asp11+Ala-peptide P MS Glu Thr Gly Asp Ala Gly Ala Ser Van Damme et al., 2009
Eukaryotic translation initiation factor 5A-1-like Q6IS14 1-154 peptide-Asp96+Gly-peptide P MS Gly Ile Gln Asp Gly Tyr Leu Ser Van Damme et al., 2009
Eukaryotic translation initiation factor 5A-1-like Q6IS14 1-154 peptide-Asp104+Ser-peptide P MS Leu Leu Gln Asp Ser Gly Glu Val Van Damme et al., 2009
Exocyst complex component 4 Q96A65 2-974 Peptide-Asp742+Ser-Peptide N MS Pro Ala Gln Asp Ser His Thr Asn Van Damme et al., 2010
Exosome complex exonuclease RRP44 Q9Y2L1 1-958 peptide-Asp319+Val-peptide P MS Asn Glu Glu Asp Val Glu Lys Glu Van Damme et al., 2009
exosome component 10 Q01780 1-885 peptide-Asp252+Met-peptide P Val Glu Gln Asp Met Phe Ala His Casciola-Rosen et al., 1999
Exosome component 10 Q01780 1-885 Peptide-Asp734+Ser-Peptide N MS Val Gln Lys Asp Ser Lys Glu Ala Van Damme et al., 2010
exportin-5 Q924C1 1-1204 peptide-Asp944+Glu-peptide N MS Cys Gly Glu Asp Glu Ile Ala Glu Van Damme et al., 2009 22285
exportin-5 Q9HAV4 1-1204 peptide-Asp944+Glu-peptide P MS Cys Gly Glu Asp Glu Ala Ala Asp Van Damme et al., 2009 22284
Exportin-5 Q9HAV4 2-1204 Peptide-Asp210+Thr-Peptide N MS Val Lys Thr Asp Thr Ser Gln Glu Van Damme et al., 2010
Exportin-5 Q9HAV4 2-1204 Peptide-Asp1124+Ser-Peptide N MS Ile Gln Lys Asp Ser Leu Asp Gln Van Damme et al., 2010
Extended synaptotagmin-2 A0FGR8 1-921 Peptide-Asp759+Ile-Peptide N MS Ile Ala Ser Asp Ile Ser Leu Pro Van Damme et al., 2010
FACT complex subunit SPT16 Q9Y5B9 2-1047 Peptide-Asp649+Ser-Peptide N MS Val Lys Gln Asp Ser Leu Val Ile Van Damme et al., 2010
far upstream element-binding protein 2 Q3U0V1 1-748 peptide-Asp92+Ala-peptide N MS Ile Gly Gly Asp Ala Ala Thr Thr Van Damme et al., 2009 25735
Far upstream element-binding protein 2 Q92945 1-711 Peptide-Asp91+Ala-Peptide N MS Ile Gly Gly Asp Ala Ala Thr Thr Van Damme et al., 2010
Far upstream element-binding protein 2 Q92945 1-711 Peptide-Asp183+Ser-Peptide N MS Ile Ser Pro Asp Ser Gly Gly Leu Van Damme et al., 2010
Far upstream element-binding protein 2 Q92945 1-711 Peptide-Asp173+Ser-Peptide N MS Ile Gln Gln Asp Ser Gly Cys Lys Van Damme et al., 2010
Farnesyl pyrophosphate synthase P14324 1-419 Peptide-Asp193+Ala-Peptide N MS Val Gly Leu Asp Ala Ile Asn Asp Van Damme et al., 2010
FAS-associated factor 1 Q9UNN5 1-650 Peptide-Asp305+Asp-Peptide N MS Phe Gly Val Asp Asp Gly Glu Val Van Damme et al., 2010
Fatty acid synthase P49327 1-2511 Peptide-Asp2461+Tyr-Peptide N MS Leu Gly Ala Asp Tyr Asn Leu Ser Van Damme et al., 2010
Fermitin family homolog 3 Q86UX7 1-667 Peptide-Asp495+Ala-Peptide N MS His Gly Pro Asp Ala Ser Ala Glu Van Damme et al., 2010
FGFR1 oncogene partner O95684 1-399 peptide-Asp253+Ser-peptide P MS Met Glu Gly Asp Ser Phe Phe Asp Van Damme et al., 2009
fiz1 Flt3 interacting zinc finger protein 1 Q9WTJ4 1-500 peptide-Asp3+Ser-peptide N MS - Met Glu Asp Ser Ser Leu Pro Van Damme et al., 2009 25796
FK506-binding protein 5 Q64378 1-456 peptide-Asp347+Ser-peptide N MS Leu Gly Leu Asp Ser Ala Asn Glu Van Damme et al., 2009 25795
Flap endonuclease 1 P39748 1-380 Peptide-Met310+Cys-Peptide N MS Ile Lys Phe Met Cys Gly Glu Lys Van Damme et al., 2010
Flap endonuclease 1 P39748 1-380 Peptide-Ser349+Leu-Peptide N MS Val Thr Gly Ser Leu Ser Ser Ala Van Damme et al., 2010
focal adhesion kinase 1 Q05397 2-1052 peptide-Asp704+Ser-peptide P Val Ser Trp Asp Ser Gly Gly Ser Gervais et al., 1998 19360
Forkhead box protein K1 P85037 2-733 Peptide-Asp80+Ser-Peptide N MS Val Ser Gly Asp Ser Ala Val Ala Van Damme et al., 2010
Forkhead box protein O3 O43524 2-673 peptide-Asp54+Ser-peptide P MS Thr Ala Ala Asp Ser Met Ile Pro Van Damme et al., 2009
fragile X mental retardation syndrome-related protein 2 Q9WVR4 1-673 peptide-Asp524+Thr-peptide N MS Ser Leu Leu Asp Thr Ser Glu Pro Van Damme et al., 2009 25797
Fragile X mental retardation syndrome-related protein 2 P51116 1-673 Peptide-Asp448+Val-Peptide N MS Pro Ser Ser Asp Val Ser Thr Ala Van Damme et al., 2010
G antigen 12J A6NER3 1-117 Peptide-Glu30+Gln-Peptide N MS Met Arg Pro Glu Gln Phe Ser Asp Van Damme et al., 2010
G antigen family B member 1 O75459 1-146 Peptide-Asp62+Ser-Peptide N MS Pro Glu Ala Asp Ser Gln Glu Leu Van Damme et al., 2010
G antigen family C member 1 O60829 1-102 Peptide-Asp62+Cys-Peptide N MS Val Glu Gly Asp Cys Gln Glu Met Van Damme et al., 2010
G patch domain and KOW motifs-containing protein Q92917 1-476 peptide-Asp327+Asn-peptide P MS Ile Gln Gln Asp Asn Ser Glu Arg Van Damme et al., 2009
G patch domain-containing protein 4 Q5T3I0 1-446 Peptide-Asp145+Glu-Peptide N MS Ile Leu Thr Asp Glu Met Leu Leu Van Damme et al., 2010
GA-binding protein subunit beta-2 Q8TAK5 1-448 peptide-Asn255+Ser-peptide P MS Ile Glu Gly Asn Ser Val Asp Ser Van Damme et al., 2009
GA-binding protein subunit beta-2 Q8TAK5 1-448 peptide-Asp258+Ser-peptide P MS Asn Ser Val Asp Ser Ser Ile Gln Van Damme et al., 2009
Gametocyte-specific factor 1 Q8WW33 1-167 peptide-Asp80+Val-peptide P MS Ile Glu Gln Asp Val Val Asn Gln Van Damme et al., 2009
Gamma-enolase P17183 1-434 peptide-Asp23+Leu-peptide P MS Val Glu Val Asp Leu Tyr Thr Ala Van Damme et al., 2009
Gamma-enolase P17183 1-434 peptide-Asp318+Asp-peptide P MS Ile Val Gly Asp Asp Leu Thr Val Van Damme et al., 2009
Gamma-interferon-inducible protein 16 Q16666 1-785 peptide-Asp774+Ser-peptide P MS Leu Asn Pro Asp Ser Ser Met Glu Van Damme et al., 2009
gamma-taxilin Q8BHN1 1-524 peptide-Asp83+Glu-peptide N MS Leu Glu Gly Asp Glu Gly Ser Asp Van Damme et al., 2009 25799
Gamma-taxilin Q9NUQ3 1-528 Peptide-Asp83+Glu-Peptide N MS Leu Glu Glu Asp Glu Gly Ser Asp Van Damme et al., 2010
Gem-associated protein 5 Q8TEQ6 1-1508 Peptide-Asn769+Ser-Peptide N MS Met Lys Glu Asn Ser Gly Pro Val Van Damme et al., 2010
Gem-associated protein 8 Q9NWZ8 1-242 Peptide-Asp133+Leu-Peptide N MS Val Glu Cys Asp Leu Ser Asn Met Van Damme et al., 2010
general transcription factor 3C polypeptide 1 Q8K284 1-2101 peptide-Asp577+Ile-peptide N MS His Ser Gly Asp Ile Ala Val Ile Van Damme et al., 2009 25806
general transcription factor 3C polypeptide 1 Q8K284 1-2101 peptide-Asp1603+Gly-peptide N MS Leu Gly Lys Asp Gly Gly Leu Asp Van Damme et al., 2009 25807
General transcription factor 3C polypeptide 1 Q12789-2 1-2109 Peptide-Asp577+Ile-Peptide N MS Asn Ser Gly Asp Ile Ala Val Ile Van Damme et al., 2010
General transcription factor 3C polypeptide 1 Q12789 1-2109 peptide-Glu464+Ser-peptide P MS Met Gln Glu Glu Ser Leu Leu Pro Van Damme et al., 2009
General transcription factor 3C polypeptide 1 Q12789 1-2109 peptide-Asp738+Ser-peptide P MS Ala Glu Glu Asp Ser Gln Gly Lys Van Damme et al., 2009
General transcription factor 3C polypeptide 2 Q8WUA4 1-911 Peptide-Glu255+Asp-Peptide N MS Val Glu Ala Glu Asp Val Glu Glu Van Damme et al., 2010
General transcription factor 3C polypeptide 2 Q8WUA4 1-911 peptide-Glu253+Ala-peptide P MS Leu Gln Val Glu Ala Glu Asp Val Van Damme et al., 2009
general transcription factor IIE subunit 1 Q9D0D5 1-440 peptide-Asp5+Val-peptide N MS Ala Asp Pro Asp Val Leu Thr Glu Van Damme et al., 2009 22279
General transcription factor IIE subunit 1 P29083 2-439 Peptide-Asp303+Ala-Peptide N MS Ile Asp Met Asp Ala Phe Gln Glu Van Damme et al., 2010
General transcription factor IIE subunit 1 P29083 2-439 peptide-Asp5+Val-peptide P MS Ala Asp Pro Asp Val Leu Thr Glu Van Damme et al., 2009
General transcription factor IIF subunit 1 P35269 1-517 peptide-Asp186+Gln-peptide P MS Lys Asp Gln Asp Gln Asp Glu Asp Van Damme et al., 2009
Glia maturation factor beta P60983 2-142 peptide-Asp55+Glu-peptide P MS Ile Ser Pro Asp Glu Leu Lys Asp Van Damme et al., 2009
Glioma tumor suppressor candidate region gene 2 protein Q9NZM5 2-478 Peptide-Asp61+Gln-Peptide N MS Leu Glu Val Asp Gln Phe Leu Glu Van Damme et al., 2010
Glioma tumor suppressor candidate region gene 2 protein Q9NZM5 2-478 Peptide-Asp321+Ala-Peptide N MS Glu Ala Gly Asp Ala Glu Val Cys Van Damme et al., 2010
Glioma tumor suppressor candidate region gene 2 protein Q9NZM5 1-478 peptide-Gly24+Leu-peptide P MS Gly Phe Leu Gly Leu Arg Pro Thr Van Damme et al., 2009
glucosidase 2 subunit beta O08795 15-521 peptide-Asp260+Thr-peptide N MS Leu Ser Gly Asp Thr Gln Thr Asp Van Damme et al., 2009 22213
Glucosidase 2 subunit beta P14314 15-528 peptide-Asp260+Thr-peptide P MS Leu Ser Gly Asp Thr Gln Thr Asp Van Damme et al., 2009
Glutamate receptor 3 P42263 29-894 Peptide-Asp416+Ser-Peptide P MU Ile Ser Asn Asp Ser Ala Ser Ser Gahring et al., 2001
Glutamate receptor 4 P48058 21-902 Peptide-Asp408+Thr-Peptide P CS Leu Gly Asn Asp Thr Ala Ala Ile Gahring et al., 2001
Glutamate [NMDA] receptor subunit epsilon-1 Q12879 23-1464 Peptide-Asp1398+Ser-Peptide P CS Ala Val Asn Asp Ser Tyr Leu Arg Gahring et al., 2001
Glutamate-rich WD repeat-containing protein 1 Q9BQ67 1-446 Peptide-Glu20+Ser-Peptide N MS Met Glu Ala Glu Ser Gly Asp Thr Van Damme et al., 2010
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 Q06210 2-699 peptide-Asp86+Val-peptide P MS Ile Glu Phe Asp Val His Leu Gly Van Damme et al., 2009
Glutamine--tRNA ligase P47897 2-775 peptide-Arg21+Glu-peptide P MS Gln Lys Ala Arg Glu Thr Leu Lys Van Damme et al., 2009
Glutamine--tRNA ligase P47897 2-775 peptide-Asp184+Leu-peptide P MS Leu Glu Ala Asp Leu Glu Lys Lys Van Damme et al., 2009
Glutathione S-transferase P P09211 2-210 peptide-Ala87+Ala-peptide P MS Gln Gln Glu Ala Ala Leu Val Asp Van Damme et al., 2009
Glycogen synthase kinase-3 alpha P49840 1-483 Peptide-Asp255+Thr-Peptide N MS Val Asp Pro Asp Thr Ala Val Leu Van Damme et al., 2010
Glycogenin-1 P46976 2-350 peptide-Asp336+Ser-peptide P MS Met Gly Ala Asp Ser Phe Asp Asn Van Damme et al., 2009
Glycyl-tRNA synthetase P41250 1-739 Peptide-Asp92+Lys-Peptide N MS Val Asp Val Asp Lys Ala Val Ala Van Damme et al., 2010
Glycylpeptide N-tetradecanoyltransferase 1 P30419 1-496 Peptide-Asp72+Ser-Peptide N MS Ser Glu Thr Asp Ser Ala Gln Asp Van Damme et al., 2010
Golgi phosphoprotein 3-like Q9H4A5 1-285 peptide-Asp116+Val-peptide P MS Pro Thr Gly Asp Val Leu Leu Asp Van Damme et al., 2009
Golgi reassembly-stacking protein 2 Q9H8Y8 2-452 Peptide-Asn447+Ala-Peptide N MS Val Asp Ala Asn Ala Ser Glu Ser Van Damme et al., 2010
Golgi resident protein GCP60 Q9H3P7 2-528 Peptide-Asp390+Ala-Peptide N MS Ile Gln Gln Asp Ala Asp Ser Val Van Damme et al., 2010
Golgin subfamily A member 3 Q08378 1-1498 Peptide-Asp648+Met-Peptide N MS Ile Glu Ala Asp Met Leu Asp Gln Van Damme et al., 2010
GON-4-like protein Q3T8J9 1-2241 Peptide-Asp953+Arg-Peptide N MS Ile Asn Ser Asp Arg Ser Leu Glu Van Damme et al., 2010
GPN-loop GTPase 2 Q9H9Y4 1-310 peptide-Asp282+Phe-peptide P MS Met Gly Ala Asp Phe His Phe Ser Van Damme et al., 2009
GRIA3 Q17R51 1-824 peptide-Asp416+Ser-peptide P Ile Ser Asn Asp Ser Ala Ser Ser Gahring et al., 2001 3290
Growth arrest-specific protein 2 O43903 1-313 peptide-Asp297+Asn-peptide P MS Met Asn Pro Asp Asn Tyr Leu Val Van Damme et al., 2009
GTP-binding protein 1 O08582 1-668 peptide-Asp620+Glu-peptide N MS Pro Thr Gly Asp Glu Ala Ser Ser Van Damme et al., 2009 25808
GTP-binding protein 1 O00178 1-669 Peptide-Asp219+Ser-Peptide N MS Leu Gly Phe Asp Ser Glu Gly Asn Van Damme et al., 2010
GTP-binding protein 1 O08582 1-668 peptide-Glu621+Ala-peptide P MS Thr Gly Asp Glu Ala Ser Ser Leu Van Damme et al., 2009
GTP-binding protein 2 Q9BX10 1-602 Peptide-Asp137+Ile-Peptide N MS Val Gly Ala Asp Ile Thr Val Leu Van Damme et al., 2010
GTP-binding protein SAR1a Q9NR31 1-198 peptide-Asn116+Ala-peptide P MS Val Glu Leu Asn Ala Leu Met Thr Van Damme et al., 2009
GTPase-activating protein and VPS9 domain-containing protein 1 Q14C86 1-1478 Peptide-Asp1009+Arg-Peptide N MS Leu Gly Pro Asp Arg Phe Ser Thr Van Damme et al., 2010
GTPase-activating protein and VPS9 domain-containing protein 1 Q14C86 1-1478 Peptide-Asp1098+Asp-Peptide N MS Ile Ser Ala Asp Asp Leu Pro Asp Van Damme et al., 2010
Guanine nucleotide-binding protein-like 1 P36915 1-607 Peptide-Glu111+Leu-Peptide N MS Val Ser Ala Glu Leu Leu Glu Leu Van Damme et al., 2010
Guanine nucleotide-binding protein-like 3 Q9BVP2 1-549 Peptide-Asn502+Ser-Peptide N MS Val Asp Glu Asn Ser Ser Gly Met Van Damme et al., 2010
Guanine nucleotide-binding protein-like 3 Q9BVP2 1-549 Peptide-Asp539+Asp-Peptide N MS Ile Glu Glu Asp Asp Ala Tyr Asp Van Damme et al., 2010
Guanine nucleotide-binding protein-like 3 Q9BVP2 1-549 peptide-Ser141+Asp-peptide P MS Ile Glu Ala Ser Asp Val Val Leu Van Damme et al., 2009
H(+)/Cl(-) exchange transporter 7 P51798 1-805 Peptide-Arg120+Thr-Peptide N MS Thr Ala Phe Arg Thr Val Glu Ile Van Damme et al., 2010
H/ACA ribonucleoprotein complex non-core subunit NAF1 Q96HR8 1-494 peptide-Asp347+Phe-peptide P MS Pro Gly Glu Asp Phe Thr Glu Val Van Damme et al., 2009
H/ACA ribonucleoprotein complex subunit 2 Q9CRB2 1-153 peptide-Glu9+Glu-peptide P MS Ala Ala Pro Glu Glu Ser Glu Ala Van Damme et al., 2009
H/ACA ribonucleoprotein complex subunit 4 O60832 2-514 Peptide-Glu440+Ala-Peptide N MS Val Val Ala Glu Ala Ala Lys Thr Van Damme et al., 2010
H/ACA ribonucleoprotein complex subunit 4 Q9ESX5 2-509 peptide-Glu430+Ala-peptide P MS Leu Val Thr Glu Ala Val Gln Ala Van Damme et al., 2009
H/ACA ribonucleoprotein complex subunit 4 Q9ESX5 2-509 peptide-Glu440+Ala-peptide P MS Leu Ala Ala Glu Ala Val Asn Val Van Damme et al., 2009
HBS1-like protein Q9Y450 1-684 Peptide-Ser35+Thr-Peptide N MS Ile Ser Pro Ser Thr Ala Ala Gln Van Damme et al., 2010
HCLS1-binding protein 3 Q53T59 1-392 peptide-Asp238+Glu-peptide P MS Val Asp Pro Asp Glu Gly Leu Phe Van Damme et al., 2009
HEAT repeat-containing protein 1 Q9H583 1-2144 Peptide-Asp1361+Ser-Peptide N MS Ile Gln Ser Asp Ser Gly Asp Ser Van Damme et al., 2010
HEAT repeat-containing protein 3 Q7Z4Q2 1-680 peptide-Asp319+Asp-peptide P MS Thr Asn Gly Asp Asp Leu Ile Glu Van Damme et al., 2009
Heat shock 70 kDa protein 13 P48723 23-471 peptide-Met158+Ala-peptide P MS Leu Lys Glu Met Ala Glu Ala Tyr Van Damme et al., 2009
Heat shock 70 kDa protein 1A/1B P08107 2-641 peptide-Asp366+Glu-peptide P CS Ile Asn Pro Asp Glu Ala Val Ala Loeb et al., 2006
Heat shock protein HSP 90-alpha P07900 2-732 peptide-Asp701+Asp-peptide P MS Ile Asp Glu Asp Asp Pro Thr Ala Hostetter et al., 2007
Heat shock protein HSP 90-alpha P07900 2-732 peptide-Asp639+His-peptide P MS Ile Asn Pro Asp His Ser Ile Ile Hostetter et al., 2007
Heat shock protein HSP 90-alpha P07900 2-732 peptide-Asp175+Thr-peptide P AB Val Arg Thr Asp Thr Gly Glu Pro Hostetter et al., 2007
Heat shock protein HSP 90-alpha P07900 2-732 Peptide-Asp722+Asp-Peptide N MS Leu Glu Gly Asp Asp Asp Thr Ser Van Damme et al., 2010
Heat shock protein HSP 90-beta P08238 2-724 peptide-Asp693+Glu-peptide P MS Ile Asp Glu Asp Glu Val Ala Ala Hostetter et al., 2007
Heat shock protein HSP 90-beta P08238 2-724 peptide-Asp631+His-peptide P MS Ile Asn Pro Asp His Pro Ile Val Hostetter et al., 2007
Helicase-like transcription factor Q14527 1-1009 Peptide-Asp807+Asn-Peptide N MS Ile His Glu Asp Asn Leu Leu Glu Van Damme et al., 2010
Helicase-like transcription factor Q14527 1-1009 Peptide-Asp52+Glu-Peptide N MS Leu Thr Ser Asp Glu Glu Val Asp Plasman et al., 2011
Helicase-like transcription factor Q14527 1-1009 peptide-Asp337+Ser-peptide P MS Val Asn Asp Asp Ser Met Lys Leu Van Damme et al., 2009
Helicase-like transcription factor Q14527 1-1009 peptide-Asp437+Val-peptide P MS Val Ile Glu Asp Val Ala Phe Ala Van Damme et al., 2009
hematopoietic lineage cell-specific protein P49710 1-486 peptide-Asp387+Tyr-peptide N MS Thr Glu Pro Asp Tyr Glu Asp Val Van Damme et al., 2009 25809
Hematopoietic lineage cell-specific protein P14317 1-486 peptide-Asp26+Phe-peptide P MS Thr Asp Pro Asp Phe Val Asn Asp Van Damme et al., 2009
hepatoma-derived growth factor-related protein 2 Q3UIH6 1-669 peptide-Asp109+Leu-peptide N MS Pro Glu Ala Asp Leu Gly Cys Gly Van Damme et al., 2009 25710
Hepatoma-derived growth factor-related protein 2 Q3UMU9 1-669 peptide-Asp109+Leu-peptide P MS Pro Glu Ala Asp Leu Gly Cys Gly Van Damme et al., 2009
Heterochromatin protein 1-binding protein 3 Q5SSJ5 2-553 Peptide-Asp68+Ile-Peptide N MS Pro Glu Pro Asp Ile Ser Ser Glu Van Damme et al., 2010
Heterogeneous nuclear ribonucleoprotein A1 P09651 2-372 Peptide-Arg196+Ser-Peptide N MS Gln Arg Gly Arg Ser Gly Ser Gly Van Damme et al., 2010
Heterogeneous nuclear ribonucleoprotein A1 P09651 2-372 peptide-Tyr318+Asn-peptide P MS Phe Gly Asn Tyr Asn Asn Gln Ser Van Damme et al., 2009
Heterogeneous nuclear ribonucleoprotein A1-like 2 Q32P51 1-320 peptide-Tyr266+Asn-peptide P MS Phe Gly Asn Tyr Asn Asn Gln Ser Van Damme et al., 2009
Heterogeneous nuclear ribonucleoprotein A3 P51991 1-378 Peptide-Asp273+Gly-Peptide N MS Phe Gly Gly Asp Gly Gly Asn Tyr Van Damme et al., 2010
Heterogeneous nuclear ribonucleoprotein C-like 1 O60812 2-293 Peptide-Asp112+Tyr-Peptide N MS Phe Asp Leu Asp Tyr Gly Phe Gln Van Damme et al., 2010
Heterogeneous nuclear ribonucleoprotein C-like 1 O60812 2-293 Peptide-Asp110+Leu-Peptide N MS Ser Ser Phe Asp Leu Asp Tyr Gly Van Damme et al., 2010
Heterogeneous nuclear ribonucleoprotein D-like O14979 1-420 Peptide-Asp158+Thr-Peptide N MS Leu Ser Trp Asp Thr Ser Lys Lys Van Damme et al., 2010
Heterogeneous nuclear ribonucleoprotein D-like O14979 1-420 Peptide-Asp243+Thr-Peptide N MS Leu Ser Pro Asp Thr Ser Glu Glu Van Damme et al., 2010
Heterogeneous nuclear ribonucleoprotein D0 Q14103 1-355 peptide-Ser71+Lys-peptide P MS Ile Asp Ala Ser Lys Asn Glu Glu Van Damme et al., 2009
heterogeneous nuclear ribonucleoprotein F Q9Z2X1 2-415 peptide-Asp251+Gly-peptide N MS Gly Leu Ser Asp Gly Tyr Gly Phe Van Damme et al., 2009 25810
Heterogeneous nuclear ribonucleoprotein F P52597 1-415 Peptide-Glu154+Ala-Peptide N MS Ile Thr Gly Glu Ala Phe Val Gln Van Damme et al., 2010
Heterogeneous nuclear ribonucleoprotein H P31943 1-449 peptide-Asp94+Trp-peptide P CS Val Glu Met Asp Trp Val Leu Lys Loeb et al., 2006
Heterogeneous nuclear ribonucleoprotein H P31943 1-449 peptide-Asp324+Gly-peptide P CS Ile Gly Pro Asp Gly Arg Val Thr Loeb et al., 2006
heterogeneous nuclear ribonucleoprotein K P61979 1-463 peptide-Asp26+Met-peptide N MS Pro Ala Glu Asp Met Glu Glu Glu Van Damme et al., 2009 22182
Heterogeneous nuclear ribonucleoprotein K P61978 1-463 Peptide-Asp128+Ala-Peptide N MS Leu Glu Ser Asp Ala Val Glu Cys Van Damme et al., 2010
Heterogeneous nuclear ribonucleoprotein K P61978 1-463 Peptide-Asp342+Glu-Peptide N MS Phe Ser Ala Asp Glu Thr Trp Asp Van Damme et al., 2010
Heterogeneous nuclear ribonucleoprotein K P61978 1-463 peptide-Asp26+Met-peptide P MS Pro Ala Glu Asp Met Glu Glu Glu Van Damme et al., 2009
Heterogeneous nuclear ribonucleoprotein L P14866 1-589 Peptide-Asp209+Val-Peptide N MS Ile Thr Thr Asp Val Leu Tyr Thr Van Damme et al., 2010
Heterogeneous nuclear ribonucleoprotein L P14866 1-589 Peptide-Asp117+Leu-Peptide N MS Val Glu Ala Asp Leu Val Glu Ala Van Damme et al., 2010
Heterogeneous nuclear ribonucleoprotein L P14866 1-589 Peptide-Asp281+Thr-Peptide N MS Asn Asp Gln Asp Thr Trp Asp Tyr Van Damme et al., 2010
heterogeneous nuclear ribonucleoprotein M Q9D0E1 2-729 peptide-Asp233+Ile-peptide N MS Val Arg Ala Asp Ile Leu Glu Asp Van Damme et al., 2009 25812
Heterogeneous nuclear ribonucleoprotein M P52272 2-730 Peptide-Asp234+Ile-Peptide N MS Val Arg Ala Asp Ile Leu Glu Asp Van Damme et al., 2010 25811
Heterogeneous nuclear ribonucleoprotein M P52272 2-730 Peptide-Asp620+Arg-Peptide N MS Ala Ser Phe Asp Arg Ala Ile Glu Van Damme et al., 2010
Heterogeneous nuclear ribonucleoprotein R O43390 2-633 Peptide-Asp123+Glu-Peptide N MS Lys Gly Pro Asp Glu Ala Lys Ile Van Damme et al., 2010
Heterogeneous nuclear ribonucleoprotein R O43390 2-633 Peptide-Glu166+Val-Peptide N MS Ile Gly Thr Glu Val Phe Val Gly Van Damme et al., 2010
Heterogeneous nuclear ribonucleoprotein R O43390 2-633 Peptide-Glu402+Glu-Peptide N MS Ile Glu Gly Glu Glu Ile Glu Ile Van Damme et al., 2010
Heterogeneous nuclear ribonucleoprotein U Q00839 2-825 Peptide-Asn264+Lys-Peptide N MS Ile Glu Glu Asn Lys Tyr Ser Arg Van Damme et al., 2010
Heterogeneous nuclear ribonucleoprotein U Q00839 2-825 Peptide-Asp548+Thr-Peptide N MS Gln Met Ala Asp Thr Gly Lys Leu Plasman et al., 2011
Heterogeneous nuclear ribonucleoprotein U Q00839 2-825 peptide-Asp65+Ser-peptide P MS Leu Gly Gly Asp Ser Ala Gly Arg Van Damme et al., 2009
Heterogeneous nuclear ribonucleoprotein U Q00839 2-825 peptide-Asp232+Gly-peptide P MS Ala Ala Gly Asp Gly Lys Thr Glu Van Damme et al., 2009
Heterogeneous nuclear ribonucleoprotein U Q8VEK3 2-800 peptide-Asp524+Thr-peptide P MS Gln Met Ala Asp Thr Gly Lys Leu Van Damme et al., 2009
Heterogeneous nuclear ribonucleoprotein U-like protein 1 Q9BUJ2 1-856 Peptide-Asp112+Thr-Peptide N MS Gln Phe Tyr Asp Thr Gln Val Ile Van Damme et al., 2010
Heterogeneous nuclear ribonucleoprotein U-like protein 1 Q9BUJ2 1-856 peptide-Asp43+Asp-peptide P MS Glu Glu Pro Asp Asp Glu Arg Glu Van Damme et al., 2009
heterogeneous nuclear ribonucleoproteins C1/C2 Q9Z204 2-313 peptide-Asp273+Leu-peptide N MS Glu Glu Gly Asp Leu Leu Asp Asp Van Damme et al., 2009 25813
heterogenous nuclear ribonucleoprotein U O88568 1-798 peptide-Asp522+Thr-peptide N MS Gln Met Ala Asp Thr Gly Lys Leu Van Damme et al., 2009 25814
high mobility group protein 1-like 10 B2RPK0 2-211 Peptide-Tyr16+Ala-Peptide N MS Met Ser Ser Tyr Ala Phe Phe Val Van Damme et al., 2010
High mobility group protein B1 P09429 2-215 Peptide-Asp33+Ala-Peptide N MS Lys His Pro Asp Ala Ser Val Asn Van Damme et al., 2010
High mobility group protein B1 P09429 2-215 Peptide-Asn37+Phe-Peptide N MS Ala Ser Val Asn Phe Ser Glu Phe Van Damme et al., 2010
histidyl-tRNA synthetase, cytoplasmic P12081 1-509 peptide-Asp48+Glu-peptide P Leu Gly Pro Asp Glu Ser Lys Gln Casciola-Rosen et al., 1999 27178
Histone acetyltransferase KAT6B Q8WYB5 1-2073 peptide-Ser1118+Val-peptide P MS Lys Pro Gln Ser Val Ala Ile Lys Van Damme et al., 2009
Histone deacetylase 1 Q13547 1-482 Peptide-Asp82+Asn-Peptide N MS Ile Arg Pro Asp Asn Met Ser Glu Van Damme et al., 2010
Histone deacetylase 1 O09106 1-482 peptide-Glu391+Glu-peptide P MS Ala Ile Pro Glu Glu Ser Gly Asp Van Damme et al., 2009
histone deacetylase 2 P70288 1-488 peptide-Asp393+Ser-peptide N MS Val His Glu Asp Ser Gly Asp Glu Van Damme et al., 2009 25815
Histone deacetylase 2 Q92769 1-488 peptide-Asp83+Asn-peptide P MS Ile Arg Pro Asp Asn Met Ser Glu Van Damme et al., 2009
Histone deacetylase complex subunit SAP18 O00422 1-153 peptide-Glu10+Glu-peptide P MS Val Thr Gln Glu Glu Ile Lys Lys Van Damme et al., 2009
Histone H1x Q92522 2-213 Peptide-Asp100+Thr-Peptide N MS Val Gln Asn Asp Thr Leu Leu Gln Van Damme et al., 2010
Histone H2A deubiquitinase MYSM1 Q5VVJ2 1-828 Peptide-Asp266+Ser-Peptide N MS Ile Thr Ser Asp Ser Gln Glu Ala Van Damme et al., 2010
Histone H2A.V Q71UI9 1-128 peptide-Asp9+Ser-peptide P MS Ala Gly Lys Asp Ser Gly Lys Ala Van Damme et al., 2009
histone H2A.Z P0C0S6 2-128 peptide-Asp9+Ser-peptide N MS Ala Gly Lys Asp Ser Gly Lys Ala Van Damme et al., 2009 22214
Histone H2A.Z P0C0S5 2-128 peptide-Asp9+Ser-peptide P MS Ala Gly Lys Asp Ser Gly Lys Ala Van Damme et al., 2009
Histone H2B type 1-B P33778 2-126 peptide-Asp52+Thr-peptide P MS Val His Pro Asp Thr Gly Ile Ser Van Damme et al., 2009
Histone H2B type 1-C/E/F/G/I P62807 2-126 peptide-Asp52+Thr-peptide P MS Val His Pro Asp Thr Gly Ile Ser Van Damme et al., 2009
Histone H2B type 1-D P58876 2-126 peptide-Asp52+Thr-peptide P MS Val His Pro Asp Thr Gly Ile Ser Van Damme et al., 2009
Histone H2B type 1-H Q93079 2-126 peptide-Asp52+Thr-peptide P MS Val His Pro Asp Thr Gly Ile Ser Van Damme et al., 2009
Histone H2B type 1-J P06899 2-126 peptide-Asp52+Thr-peptide P MS Val His Pro Asp Thr Gly Ile Ser Van Damme et al., 2009
Histone H2B type 1-K O60814 2-126 peptide-Asp52+Thr-peptide P MS Val His Pro Asp Thr Gly Ile Ser Van Damme et al., 2009
Histone H2B type 1-L Q99880 2-126 peptide-Asp52+Thr-peptide P MS Val His Pro Asp Thr Gly Ile Ser Van Damme et al., 2009
Histone H2B type 1-M Q99879 2-126 peptide-Asp52+Thr-peptide P MS Val His Pro Asp Thr Gly Ile Ser Van Damme et al., 2009
Histone H2B type 1-N Q99877 2-126 peptide-Asp52+Thr-peptide P MS Val His Pro Asp Thr Gly Ile Ser Van Damme et al., 2009
Histone H2B type 1-O P23527 2-126 peptide-Asp52+Thr-peptide P MS Val His Pro Asp Thr Gly Ile Ser Van Damme et al., 2009
Histone H2B type 2-E Q16778 2-126 peptide-Asp52+Thr-peptide P MS Val His Pro Asp Thr Gly Ile Ser Van Damme et al., 2009
Histone H2B type 2-F Q5QNW6 2-126 peptide-Asp52+Thr-peptide P MS Val His Pro Asp Thr Gly Ile Ser Van Damme et al., 2009
Histone H2B type 3-B Q8N257 2-126 peptide-Asp52+Thr-peptide P MS Val His Pro Asp Thr Gly Ile Ser Van Damme et al., 2009
Histone H2B type F-S P57053 2-126 peptide-Asp52+Thr-peptide P MS Val His Pro Asp Thr Gly Ile Ser Van Damme et al., 2009
Histone lysine demethylase PHF8 Q9UPP1 1-1060 Peptide-Asp645+Glu-Peptide N MS Val Met Glu Asp Glu Phe Asp Leu Van Damme et al., 2010
Histone-lysine N-methyltransferase EHMT1 Q9H9B1-2 1-825 Peptide-Glu428+Ser-Peptide N MS Leu Gly Ser Glu Ser Tyr Lys Ser Van Damme et al., 2010
Histone-lysine N-methyltransferase EHMT1 Q9H9B1-2 1-825 Peptide-Asp476+Val-Peptide N MS Asn Gly Pro Asp Val Leu Glu Thr Van Damme et al., 2010
Histone-lysine N-methyltransferase MLL2 O14686 1-5537 Peptide-Asp1673+Val-Peptide N MS Val Ser Pro Asp Val Glu Pro Gly Van Damme et al., 2010
Histone-lysine N-methyltransferase MLL4 Q9UMN6 2-2715 Peptide-Glu242+Ala-Peptide N MS Val Val Ala Glu Ala Ala Val Thr Van Damme et al., 2010
Histone-lysine N-methyltransferase MLL5 Q8IZD2 1-1858 Peptide-Asp624+Ala-Peptide N MS Ile Val Ser Asp Ala Glu Val Ile Van Damme et al., 2010
Histone-lysine N-methyltransferase NSD3 Q9BZ95 1-1437 peptide-Asp175+Leu-peptide P MS Leu Cys Gly Asp Leu Leu Asn Glu Van Damme et al., 2009
Histone-lysine N-methyltransferase SETD1A O15047 1-1707 Peptide-Asp1252+Leu-Peptide N MS Thr Glu Val Asp Leu Ala Val Leu Van Damme et al., 2010
HIV Tat-specific factor 1 O43719 1-755 Peptide-Asp33+Ala-Peptide N MS Thr Gln Thr Asp Ala Gly Gly Glu Van Damme et al., 2010
HIV Tat-specific factor 1 O43719 1-755 peptide-Asp39+Ser-peptide P MS Gly Glu Pro Asp Ser Leu Gly Gln Van Damme et al., 2009
hsc70-interacting protein P50502 1-369 peptide-Asp92+Thr-peptide P Ile Glu Pro Asp Thr Asp Ala Pro Caruso & Reiners, 2006 27152
Hsc70-interacting protein P50502 1-369 peptide-Asp180+Ser-peptide P MS Ile Asn Pro Asp Ser Ala Gln Pro Hostetter et al., 2007
Hydroxymethylglutaryl-CoA synthase, cytoplasmic Q01581 1-520 Peptide-Asp421+Val-Peptide N MS Val Ala Pro Asp Val Phe Ala Glu Van Damme et al., 2010
Importin subunit alpha-1 P52294 1-538 peptide-Asp64+Gly-peptide P MS Val Met Ser Asp Gly Gly Phe His Van Damme et al., 2009
Importin subunit alpha-3 O00505 1-521 peptide-Asp59+Ser-peptide P MS Ser Leu Glu Asp Ser Asp Val Asp Van Damme et al., 2009
importin subunit alpha-4 O35343 1-521 peptide-Asp59+Ser-peptide N MS Ile Cys Glu Asp Ser Asp Ile Asp Van Damme et al., 2009 22220
Importin subunit alpha-4 O00629 1-521 peptide-Asp59+Ser-peptide P MS Ile Cys Glu Asp Ser Asp Ile Asp Van Damme et al., 2009
Importin subunit alpha-7 O60684 1-536 Peptide-Asp69+Ser-Peptide N MS Leu Leu Met Asp Ser Tyr Val Ser Van Damme et al., 2010
Importin subunit alpha-7 O60684 1-536 Peptide-Asp64+Ser-Peptide N MS Ala Met Phe Asp Ser Leu Leu Met Van Damme et al., 2010
Importin subunit beta-1 Q14974 1-876 Peptide-Asp627+Ala-Peptide N MS Val Gln Glu Asp Ala Leu Met Ala Van Damme et al., 2010
Importin subunit beta-1 Q14974 1-876 Peptide-Asp786+Val-Peptide N MS Val His Pro Asp Val Met Leu Val Van Damme et al., 2010
induced myeloid leukemia cell differentiation protein Mcl-1 Q07820 1-350 peptide-Asp117+Ala-peptide P NT Pro Ala Ala Asp Ala Ile Met Ser Han et al., 2005
induced myeloid leukemia cell differentiation protein Mcl-1 Q07820 1-350 peptide-Asp127+Gly-peptide P NT Glu Glu Leu Asp Gly Tyr Glu Pro Han et al., 2005
induced myeloid leukemia cell differentiation protein Mcl-1 Q07820 1-350 peptide-Asp157+Gly-peptide P NT Thr Ser Thr Asp Gly Ser Leu Pro Han et al., 2005
initiation factor eIF-4G Q6NZJ6 1-1600 peptide-Asp669+Phe-peptide N MS Cys Gly Pro Asp Phe Thr Pro Ser Van Damme et al., 2009 22218
Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 O43314 1-1243 Peptide-Asp274+Ser-Peptide N MS Val Glu Arg Asp Ser Glu Gly Lys Van Damme et al., 2010
Inositol polyphosphate 5-phosphatase OCRL-1 Q01968 1-901 peptide-Asp708+Ser-peptide P MS Leu Glu Glu Asp Ser Phe Leu Glu Van Damme et al., 2009
Insulin-like growth factor 2 mRNA-binding protein 1 Q9NZI8 1-577 Peptide-Lys346+Val-Peptide N MS Ile Met Lys Lys Val Arg Glu Ala Van Damme et al., 2010
Insulin-like growth factor 2 mRNA-binding protein 1 Q9NZI8 1-577 peptide-Asp305+Thr-peptide P MS Val Glu Gln Asp Thr Glu Thr Lys Van Damme et al., 2009
Insulin-like growth factor 2 mRNA-binding protein 3 O00425 1-579 Peptide-Asp116+Ser-Peptide N MS Val Asn Thr Asp Ser Glu Thr Ala Van Damme et al., 2010
Insulin-like growth factor 2 mRNA-binding protein 3 O00425 1-579 Peptide-Asp305+Thr-Peptide N MS Ile Glu Gln Asp Thr Asp Thr Lys Van Damme et al., 2010
integrin alpha-6 P23229 24-1130 peptide-Asp100+Asn-peptide P MS Ile Glu Phe Asp Asn Asp Ala Asp Russo et al., 2018
integrin alpha-6 P23229 24-1130 peptide-Asp166+Met-peptide P MS Ile Glu Asp Asp Met Asp Gly Gly Russo et al., 2018
integrin alpha-6 P23229 24-1130 peptide-Asp199+Phe-peptide P MS Phe Thr Lys Asp Phe His Tyr Ile Russo et al., 2018
integrin alpha-6 P23229 24-1130 peptide-Asp302+Ser-peptide P MS Phe Ser Leu Asp Ser Gly Lys Gly Russo et al., 2018
integrin alpha-6 P23229 24-1130 peptide-Asp311+Glu-peptide P MS Val Ser Lys Asp Glu Ile Thr Phe Russo et al., 2018
integrin alpha-6 P23229 24-1130 peptide-Asp358+Val-peptide P MS Phe Gly Tyr Asp Val Ala Val Val Russo et al., 2018
integrin alpha-6 P23229 24-1130 peptide-Asp482+Arg-peptide P MS Met Asp Leu Asp Arg Asn Ser Tyr Russo et al., 2018
integrin alpha-6 P23229 24-1130 peptide-Asp488+Val-peptide P MS Ser Tyr Pro Asp Val Ala Val Gly Russo et al., 2018
integrin beta-4 P16144 28-1822 peptide-Glu223+Arg-peptide P MS Leu Gln Gly Glu Arg Ile Ser Gly Russo et al., 2018
integrin beta-4 P16144 28-1822 peptide-Asp237+Ala-peptide P MS Gly Gly Phe Asp Ala Ile Leu Gln Russo et al., 2018
integrin beta-4 P16144 28-1822 peptide-Asp272+Gly-peptide P MS Tyr Glu Ala Asp Gly Ala Asn Val Russo et al., 2018
integrin beta-4 P16144 28-1822 peptide-Asp611+Thr-peptide P MS Leu Tyr Thr Asp Thr Ile Cys Glu Russo et al., 2018
integrin beta-4 P16144 28-1822 peptide-Asp351+Ser-peptide P MS Leu Gln Glu Asp Ser Ser Asn Ile Russo et al., 2018
integrin beta-4 P16144 28-1822 peptide-Asp442+Gly-peptide P MS Ser Phe Ser Asp Gly Leu Lys Met Russo et al., 2018
integrin beta-4 P16144 28-1822 peptide-Asp447+Ala-peptide P MS Leu Lys Met Asp Ala Gly Ile Ile Russo et al., 2018
Interferon-induced, double-stranded RNA-activated protein kinase P19525 2-551 peptide-Asn218+Ser-peptide P MS Ile Asn Ser Asn Ser Asp Ser Leu Van Damme et al., 2009
Interferon-related developmental regulator 1 O00458 1-451 Peptide-Asp408+Ala-Peptide N MS Val Met Leu Asp Ala Ala Thr Leu Van Damme et al., 2010
Interleukin enhancer-binding factor 3 Q12906 1-894 Peptide-Asp597+Ala-Peptide N MS Leu Ala Leu Asp Ala Asn Lys Lys Van Damme et al., 2010
Interleukin enhancer-binding factor 3 Q12906 1-894 peptide-Asp63+Asn-peptide P MS Ala Glu Ser Asp Asn Met Asp Val Van Damme et al., 2009
Intersectin-1 Q15811 1-1721 peptide-Asp271+Gly-peptide P CS Ile Asp Gln Asp Gly Lys Leu Thr Loeb et al., 2006
isoleucyl-tRNA synthetase, cytoplasmic P41252 1-1262 peptide-Asp982+Gln-peptide P Val Thr Pro Asp Gln Ser Met Val Casciola-Rosen et al., 1999 22184
Isoleucyl-tRNA synthetase, cytoplasmic P41252 1-1262 Peptide-Met825+Gln-Peptide N MS Val Ser Gln Met Gln Ser Val Ile Van Damme et al., 2010
IST1 homolog Q9CX00 1-362 peptide-Asp194+Leu-peptide N MS Val Glu Thr Asp Leu Ile Asp Val Van Damme et al., 2009 22221
IST1 homolog P53990 1-364 Peptide-Asp194+Leu-Peptide N MS Val Glu Thr Asp Leu Ile Asp Val Van Damme et al., 2010
janus kinase and microtubule-interacting protein 1 Q8BVL9 1-626 peptide-Asp17+Ser-peptide N MS Ala Glu Thr Asp Ser Val Gln Met Van Damme et al., 2009 25693
Kae1 putative peptidase Q9NPF4 1-335 Peptide-Arg312+Thr-Peptide N MS Ala Gly His Arg Thr Pro Leu Ser Van Damme et al., 2010
Kanadaptin Q9BWU0 1-796 Peptide-Asp343+Ala-Peptide N MS Met Gly Glu Asp Ala Val Glu Asp Van Damme et al., 2010
Kanadaptin Q9BWU0 1-796 Peptide-Asp534+Ser-Peptide N MS Pro Ser Gln Asp Ser Leu Asp Ala Van Damme et al., 2010
Kanadaptin Q9BWU0 1-796 peptide-Asp348+Ala-peptide P MS Val Glu Asp Asp Ala Glu Glu Asn Van Damme et al., 2009
Kelch repeat and BTB domain-containing protein 8 Q8NFY9 1-601 peptide-Asp334+Asn-peptide P MS Val Ser Pro Asp Asn Asp Ile Tyr Van Damme et al., 2009
Keratin, type I cytoskeletal 18 P05783 2-430 Peptide-Asp394+Ala-Peptide N MS Asn Leu Gly Asp Ala Leu Asp Ser Van Damme et al., 2010
Keratin, type I cytoskeletal 19 P08727 1-400 Peptide-Asp238+Ser-Peptide N MS Val Glu Val Asp Ser Ala Pro Gly Van Damme et al., 2010
Keratin, type II cytoskeletal 75 O95678 1-551 peptide-Asp317+Ser-peptide P MS Leu Asp Leu Asp Ser Ile Ile Ala Van Damme et al., 2009
Keratin, type II cytoskeletal 8 P05787 1-483 peptide-Asp257+Ser-peptide P MS Leu Asp Met Asp Ser Ile Ile Ala Van Damme et al., 2009
Kinesin-1 heavy chain P33176 1-963 peptide-Asp820+Asp-peptide P MS Ile Asp Ser Asp Asp Thr Gly Gly Van Damme et al., 2009
Kinesin-like protein KIF20B Q96Q89 1-1820 Peptide-Asp1392+Gln-Peptide N MS Val Glu Gln Asp Gln Val Leu Glu Van Damme et al., 2010
Kinesin-like protein KIF20B Q96Q89 1-1820 Peptide-Asp1604+Ser-Peptide N MS Val Val Leu Asp Ser Cys Glu Val Van Damme et al., 2010
Kinesin-like protein KIF21A Q7Z4S6 1-1674 Peptide-Met840+Ser-Peptide N MS Val Arg Pro Met Ser Asp Lys Val Van Damme et al., 2010
Kinesin-like protein KIF21A Q7Z4S6 1-1674 Peptide-Asp1302+Lys-Peptide N MS Val Gln Gln Asp Lys Ser Asp Glu Van Damme et al., 2010
Kinesin-like protein KIF21A Q7Z4S6 1-1674 peptide-Asp531+Lys-peptide P MS Leu Ser Ser Asp Lys Glu Thr Ile Van Damme et al., 2009
Kinesin-like protein KIF21B O75037 1-1637 peptide-Asp1396+Ala-peptide P MS Ile Ser Gly Asp Ala Cys Ala Ala Van Damme et al., 2009
Kinesin-like protein KIF2C Q99661 1-725 Peptide-Ser179+Ser-Peptide N MS Ile Arg Gly Ser Ser Ser Ala Asn Van Damme et al., 2010
Kinesin-like protein KIF3B O15066 1-747 peptide-Lys420+Leu-peptide P MS Gln Gln Glu Lys Leu Glu Ile Glu Van Damme et al., 2009
KN motif and ankyrin repeat domain-containing protein 2 Q63ZY3 1-851 peptide-Asn505+Gly-peptide P MS Val Gly Val Asn Gly Gly Tyr Glu Van Damme et al., 2009
KRR1 small subunit processome component homolog Q13601 2-381 Peptide-Glu275+Ser-Peptide N MS Pro Gln Pro Glu Ser Gln Ile Asp Van Damme et al., 2010
la-related protein 1 Q6ZQ58 2-1072 peptide-Asp31+Ala-peptide N MS Pro Ala Pro Asp Ala Gln Ala Glu Van Damme et al., 2009 25821
la-related protein 1 Q6PKG0 2-1096 peptide-Asp606+Phe-peptide P MS Glu Glu Leu Asp Phe Leu Phe Asp Van Damme et al., 2009 25822
la-related protein 1 Q6ZQ58 2-1072 peptide-Asp725+Ala-peptide N MS Val Pro Thr Asp Ala Leu Ala Asn Van Damme et al., 2009 25823
la-related protein 1 Q6ZQ58 2-1072 peptide-Asp607+Ser-peptide N MS Ser Glu Glu Asp Ser Asp Tyr Glu Van Damme et al., 2009 25824
La-related protein 1 Q6PKG0 2-1096 Peptide-Asp172+Ala-Peptide N MS Asp Phe Gly Asp Ala Ile Asn Trp Van Damme et al., 2010
La-related protein 1 Q6PKG0 2-1096 peptide-Asp689+Leu-peptide P MS Tyr Glu Gln Asp Leu Trp Ala Glu Van Damme et al., 2009
La-related protein 1 Q6ZQ58 2-1072 peptide-Asp583+Phe-peptide P MS Glu Glu Leu Asp Phe Leu Phe Asp Van Damme et al., 2009
La-related protein 7 Q4G0J3 1-582 Peptide-Asp418+Ser-Peptide N MS Met Glu Thr Asp Ser Gly Val Pro Van Damme et al., 2010
lamin-B1 P20700 2-586 peptide-Asp231+Ser-peptide P NT Val Glu Val Asp Ser Gly Arg Gln Zhang et al., 2001 25617
late 100 kDa protein P24933 1-807 peptide-Asp48+Pro-peptide P MU Ile Glu Gln Asp Pro Gly Phe Val Andrade et al., 2001
late 100 kDa protein P24933 1-807 peptide-Asp560+Gly-peptide P MU Val Ser Gly Asp Gly Leu Leu Glu Andrade et al., 2001
Lethal(2) giant larvae protein homolog 2 Q6P1M3 1-1020 Peptide-Asp548+Leu-Peptide N MS Val Glu Ala Asp Leu Leu Gln Asp Van Damme et al., 2010
Leucine zipper protein 1 Q86V48 2-1076 Peptide-Asp442+Ser-Peptide N MS Val Ser Thr Asp Ser Gly Thr Gln Van Damme et al., 2010
leucine-rich repeat flightless-interacting protein 1 Q3UZ39 1-729 peptide-Asp584+Val-peptide N MS Gln Asp Pro Asp Val Gly Asp Met Van Damme et al., 2009 25825
Leucine-rich repeat flightless-interacting protein 1 Q32MZ4 1-808 Peptide-Glu389+Ser-Peptide N MS Val Gln Val Glu Ser Asn Glu Val Van Damme et al., 2010
Leucine-rich repeat flightless-interacting protein 1 Q32MZ4 1-808 Peptide-Asp673+Gly-Peptide N MS Val Leu Ala Asp Gly Asp Thr Leu Van Damme et al., 2010
Leucine-rich repeat flightless-interacting protein 1 Q32MZ4 1-808 Peptide-Asp675+Thr-Peptide N MS Ala Asp Gly Asp Thr Leu Asp Phe Van Damme et al., 2010
Leucine-rich repeat flightless-interacting protein 1 Q32MZ4 1-808 Peptide-Asp737+Ile-Peptide N MS Pro Ser Gln Asp Ile Ser Asp Ala Van Damme et al., 2010
Leucine-rich repeat flightless-interacting protein 1 Q32MZ4 1-808 Peptide-Glu637+Ser-Peptide N MS Ile Ala Ala Glu Ser Ser Glu Asn Van Damme et al., 2010
Leucine-rich repeat flightless-interacting protein 1 Q32MZ4 2-808 peptide-Asp772+Asp-peptide P MS Leu Glu Asn Asp Asp Leu Ser Ala Van Damme et al., 2009
Leucine-rich repeat-containing protein 16C Q3V3V9 1-1296 peptide-Asp1218+Ile-peptide P MS Pro Ala Pro Asp Ile Leu Ser Leu Van Damme et al., 2009
Leucyl-tRNA synthetase, cytoplasmic Q9P2J5 1-1176 Peptide-Asp503+Ala-Peptide N MS Asp Ala Gly Asp Ala Leu Ile Tyr Van Damme et al., 2010
leupaxin Q99N69 1-386 peptide-Asp5+Ala-peptide N MS Glu Glu Leu Asp Ala Leu Leu Glu Van Damme et al., 2009 25826
LIM and senescent cell antigen-like-containing domain protein 1 P48059 2-325 Peptide-Asp106+Ile-Peptide N MS Val Leu Ala Asp Ile Gly Phe Val Van Damme et al., 2010
Lipopolysaccharide-responsive and beige-like anchor protein P50851 2-2863 Peptide-Asp1204+Leu-Peptide N MS Val Glu Ser Asp Leu Gly Gln Met Van Damme et al., 2010
Liprin-alpha-1 Q13136 1-1202 peptide-Asp33+Ser-peptide P MS Pro Asp Ala Asp Ser His Phe Glu Van Damme et al., 2009
Liprin-alpha-3 O75145 1-1194 peptide-Asp1037+Val-peptide P MS Gln Ile Arg Asp Val Met Val Trp Van Damme et al., 2009
lupus La protein P05455 1-408 peptide-Asp220+Ala-peptide P Leu Glu Glu Asp Ala Glu Met Lys Casciola-Rosen et al., 1999 22185
Lysine-specific demethylase 3B Q7LBC6 1-1761 peptide-Asp697+Ser-peptide P MS Ile Thr Thr Asp Ser Ser Lys Leu Van Damme et al., 2009
Lysine-specific demethylase 5C P41229 1-1560 Peptide-Asp1407+Leu-Peptide N MS Met Glu Gly Asp Leu Leu Glu Val Van Damme et al., 2010
Lysine-specific demethylase 5D Q9BY66 1-1539 peptide-Asp1391+Leu-peptide P MS Met Glu Gly Asp Leu Leu Glu Val Van Damme et al., 2009
Lysine-specific demethylase PHF2 O75151 1-1096 Peptide-Ser60+Thr-Peptide N MS His Gly Lys Ser Thr Leu Lys Lys Van Damme et al., 2010
Lysine-specific demethylase PHF2 Q9WTU0 1-1096 peptide-Ser60+Thr-peptide P MS His Gly Lys Ser Thr Leu Lys Lys Van Damme et al., 2009
Lysyl-tRNA synthetase Q15046 2-597 Peptide-Glu67+Glu-Peptide N MS Val Gly Pro Glu Glu Glu Ser Val Van Damme et al., 2010
M-phase phosphoprotein 6 Q9D1Q1 1-161 peptide-Asp109+Val-peptide N MS Val Glu Val Asp Val Ser Asp Glu Van Damme et al., 2009 25842
MACRO domain-containing protein 1 Q9BQ69 1-325 Peptide-Asp167+Ala-Peptide N MS Leu Glu Val Asp Ala Ile Val Asn Van Damme et al., 2010
major centromere autoantigen B P07199 1-599 peptide-Asp457+Glu-peptide P Val Asp Ser Asp Glu Glu Glu Glu Casciola-Rosen et al., 1999 27183
Male-enhanced antigen 1 Q16626 1-185 peptide-Asp89+Gly-peptide P MS Pro Val Gly Asp Gly Asp Val Val Van Damme et al., 2009
MAP kinase-activating death domain protein Q8WXG6 2-1647 Peptide-Asp688+Ser-Peptide N MS Pro Gly Pro Asp Ser Glu Asn Ser Van Damme et al., 2010
MAP kinase-activating death domain protein Q8WXG6 2-1647 peptide-Asp1342+Gln-peptide P MS Met Gly Met Asp Gln Gly Pro Gln Van Damme et al., 2009
matrin-3 Q8K310 1-846 peptide-Asp452+Tyr-peptide N MS Ala Ala Val Asp Tyr Tyr Thr Thr Van Damme et al., 2009 25828
Matrin-3 P43243 2-847 peptide-Glu136+Asn-peptide P MS Ile Thr Pro Glu Asn Leu Pro Gln Van Damme et al., 2009
MAX gene-associated protein Q8IWI9 1-3026 peptide-Asp339+Ser-peptide P MS Met Asp Thr Asp Ser Ala Leu Ser Van Damme et al., 2009
Mdn1 midasin A2ANY6 1-5589 peptide-Asp5179+Thr-peptide N MS Ile Leu Met Asp Thr Glu Glu Glu Van Damme et al., 2009 25833
Mediator of DNA damage checkpoint protein 1 Q14676 1-2089 Peptide-Asp653+Thr-Peptide N MS Val Asp Thr Asp Thr Leu Gly Glu Van Damme et al., 2010
Mediator of DNA damage checkpoint protein 1 Q14676 1-2089 Peptide-Asp605+Ala-Peptide N MS Ala Glu Gly Asp Ala Gly Ala Glu Van Damme et al., 2010
Mediator of DNA damage checkpoint protein 1 Q14676 1-2089 peptide-Asp651+Thr-peptide P MS Leu Val Val Asp Thr Asp Thr Leu Van Damme et al., 2009
Mediator of RNA polymerase II transcription subunit 1 Q15648 1-1581 Peptide-Asp731+Thr-Peptide N MS Met Thr Ala Asp Thr Leu Asp Thr Van Damme et al., 2010
Melanoma-associated antigen D2 Q9UNF1 2-606 Peptide-Asp91+Thr-Peptide N MS Gln Leu Thr Asp Thr Gln Val Leu Van Damme et al., 2010
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 Q96QZ7 1-1491 Peptide-Asp782+Ser-Peptide P CS Asp Gln Thr Asp Ser Ser Gly Gln Ivanova et al., 2011
Mesoderm induction early response protein 1 Q8N108 1-512 Peptide-Glu48+Thr-Peptide N MS Met Glu Gly Glu Thr Asn Phe Ser Van Damme et al., 2010
Methionine aminopeptidase 2 P50579 2-478 Peptide-Asp57+Lys-Peptide N MS Gln Glu Pro Asp Lys Glu Ser Gly Van Damme et al., 2010
Methionine--tRNA ligase, cytoplasmic P56192 1-900 Peptide-Asp368+Ile-Peptide N MS Ile Thr Gln Asp Ile Phe Gln Gln Van Damme et al., 2010
Methyl-CpG-binding domain protein 4 O95243 1-580 Peptide-Asp261+Ser-Peptide N MS Val Gln Ser Asp Ser Lys Arg Glu Van Damme et al., 2010
Methylosome subunit pICln P54105 2-237 peptide-Gln199+Tyr-peptide P MS Val Ser Ser Gln Tyr Asn Met Ala Van Damme et al., 2009
Methyltransferase-like protein 13 Q8N6R0 1-699 Peptide-Asp397+Tyr-Peptide N MS Leu Ser Gly Asp Tyr Val Ile Glu Van Damme et al., 2010
MICAL-like protein 1 Q8N3F8 1-863 Peptide-Asp676+Gln-Peptide N MS Val Gln Ala Asp Gln Tyr Ile Pro Van Damme et al., 2010
Microfibrillar-associated protein 1 P55081 1-439 Peptide-Glu115+Ser-Peptide N MS Val Val Gly Glu Ser Asp Ser Glu Van Damme et al., 2010
Microfibrillar-associated protein 1 P55081 1-439 peptide-Asp268+Asp-peptide P MS Leu Asn Thr Asp Asp Glu Asn Asp Van Damme et al., 2009
Microprocessor complex subunit DGCR8 Q8WYQ5 1-773 Peptide-Asp248+Ala-Peptide N MS Asn Asp Val Asp Ala Leu Leu Glu Van Damme et al., 2010
Microprocessor complex subunit DGCR8 Q8WYQ5 1-773 Peptide-Asp432+Glu-Peptide N MS Val Cys Lys Asp Glu Ser Val Asp Van Damme et al., 2010
Microprocessor complex subunit DGCR8 Q8WYQ5 1-773 Peptide-Asp396+Ser-Peptide N MS Asp Glu Pro Asp Ser Met Gly Ala Van Damme et al., 2010
Microtubule-actin cross-linking factor 1, isoform 4 Q9UPN3-5 1-5938 Peptide-Asp5836+Thr-Peptide N MS Leu Ala Gly Asp Thr Ser Asn Ser Van Damme et al., 2010
Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 Q9UPN3 1-7388 peptide-Asp7286+Thr-peptide P MS Leu Ala Gly Asp Thr Ser Asn Ser Van Damme et al., 2009
Microtubule-associated protein 1A P78559 1-2803 Peptide-Asp534+Phe-Peptide N MS Leu Thr Gln Asp Phe Glu Glu Met Van Damme et al., 2010
Microtubule-associated protein 1A P78559 1-2803 peptide-Arg427+Lys-peptide P MS Lys Lys Glu Arg Lys Glu Leu Lys Van Damme et al., 2009
Microtubule-associated protein 1B P46821 2-2468 Peptide-Ala811+Ala-Peptide N MS Val Met Ala Ala Ala Gly Ile Ala Van Damme et al., 2010
Microtubule-associated protein 1B P46821 2-2468 Peptide-Glu1407+Ser-Peptide N MS Ile Gly Ser Glu Ser Ala Tyr Glu Van Damme et al., 2010
microtubule-associated protein 4 P27546 1-1125 peptide-Asp878+Lys-peptide N MS Leu Ser Val Asp Lys Lys Pro Thr Van Damme et al., 2009 25830
Microtubule-associated protein 4 P27816 2-1152 Peptide-Asp8+Ala-Peptide N MS Ser Leu Ala Asp Ala Leu Thr Glu Van Damme et al., 2010
Microtubule-associated protein 4 P27816 2-1152 Peptide-Asp299+Met-Peptide N MS Met Glu Ser Asp Met Ala Leu Val Van Damme et al., 2010
Microtubule-associated protein 4 P27816 2-1152 Peptide-Met300+Ala-Peptide N MS Glu Ser Asp Met Ala Leu Val Lys Van Damme et al., 2010
Microtubule-associated protein 4 P27816 2-1152 Peptide-Asp642+Ser-Peptide N MS Ala Glu Glu Asp Ser Val Leu Glu Van Damme et al., 2010
Microtubule-associated protein 4 P27816 2-1152 Peptide-Thr1150+Ser-Ile N MS Ile Gln Glu Thr Ser Ile - - Van Damme et al., 2010
Microtubule-associated protein 4 P27816 2-1152 peptide-Leu302+Val-peptide P MS Asp Met Ala Leu Val Lys Asp Met Van Damme et al., 2009
Microtubule-associated protein RP/EB family member 1 Q15691 2-268 peptide-Asp250+Glu-peptide P MS Tyr Ala Thr Asp Glu Gly Phe Val Van Damme et al., 2009
Midasin Q9NU22 1-5596 Peptide-Asp5223+Glu-Peptide N MS Leu Gly Phe Asp Glu Met Glu Val Van Damme et al., 2010
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta O60566 1-1050 Peptide-Asp576+Val-Peptide N MS Val Ser Pro Asp Val Cys Asp Glu Van Damme et al., 2010
MKI67 FHA domain-interacting nucleolar phosphoprotein Q91VE6 2-317 peptide-Asp19+Ser-peptide N MS Pro Gln Glu Asp Ser Gln Phe Glu Van Damme et al., 2009 25831
MKI67 FHA domain-interacting nucleolar phosphoprotein Q91VE6 2-317 peptide-Asp213+Gln-peptide N MS Val Leu Pro Asp Gln Lys Glu Gly Van Damme et al., 2009 25832
MKIAA0224 protein Q6A0A1 1-1224 peptide-Asp55+Leu-peptide N MS Leu Gly Leu Asp Leu Leu Ala Ser Van Damme et al., 2009 25834
MKIAA0244 protein Q80U54 1-1184 peptide-Asp737+Gln-peptide N MS Leu Leu Gln Asp Gln Glu Asn Ser Van Damme et al., 2009 25836
MKIAA1227 protein Q6ZPV6 1-1074 peptide-Asp459+Ala-peptide N MS Val Gly Gly Asp Ala Ala Ala Ala Van Damme et al., 2009 25838
MKIAA1732 protein Q69ZC0 1-704 peptide-Asp123+Glu-peptide N MS Pro Ser Gln Asp Glu Glu Glu Gly Van Damme et al., 2009 25840
MORC family CW-type zinc finger protein 3 Q14149 1-939 Peptide-Asp615+Ser-Peptide N MS Phe Val Gly Asp Ser Glu Pro Cys Van Damme et al., 2010
MRG-binding protein Q9NV56 1-204 Peptide-Glu125+Met-Peptide N MS Ile Glu Glu Glu Met Lys Glu Glu Van Damme et al., 2010
mRNA cap guanine-N7 methyltransferase O43148 1-476 Peptide-Asp261+Ser-Peptide N MS Ile Thr Ala Asp Ser Ser Lys Glu Van Damme et al., 2010
mRNA-decapping enzyme 2 Q8IU60 1-420 Peptide-Asp367+Ala-Peptide N MS Phe Glu Thr Asp Ala Val Tyr Asp Van Damme et al., 2010
MTSS1-like protein Q765P7 1-747 Peptide-Asp502+Ala-Peptide N MS Val Asn Gly Asp Ala Asp Ser Glu Van Damme et al., 2010
myb-binding protein 1A Q7TPV4 1-1344 peptide-Asp789+Gln-peptide N MS Met Ala Leu Asp Gln Asn Leu Ala Van Damme et al., 2009 22229
myb-binding protein 1A Q9BQG0 1-1328 peptide-Asp790+Gln-peptide P MS Met Ala Leu Asp Gln Ser Leu Ala Van Damme et al., 2009 22228
myb-binding protein 1A Q7TPV4 1-1344 peptide-Asp1201+Ala-peptide N MS Ser Gln Gln Asp Ala Val Thr Glu Van Damme et al., 2009 22231
Myb-binding protein 1A Q9BQG0 1-1328 Peptide-Asp1194+Gly-Peptide N MS Pro Ala Glu Asp Gly Thr Pro Ala Van Damme et al., 2010
Myb-binding protein 1A Q9BQG0 1-1328 Peptide-Asp728+Asn-Peptide N MS Glu Gly Glu Asp Asn Arg Ser Ser Van Damme et al., 2010
Myb-binding protein 1A Q9BQG0 1-1328 peptide-Asp420+Ser-peptide P MS Pro Asp Leu Asp Ser Leu Val Asp Van Damme et al., 2009
Myosin-10 P35580 2-1976 Peptide-Asn1108+Ala-Peptide N MS His Lys Asn Asn Ala Leu Lys Val Van Damme et al., 2010
myosin-XVIIIa Q9JMH9 1-2050 peptide-Asp1965+Ser-peptide N MS Leu Glu Gly Asp Ser Asp Val Asp Van Damme et al., 2009
myotubularin-related protein 5 Q6ZPE2 1-1867 peptide-Asp99+Asn-peptide N MS Val Cys Thr Asp Asn Ala Thr Glu Van Damme et al., 2009 25841
N-acetylgalactosamine kinase Q01415 1-458 peptide-Met25+Phe-peptide P MS Leu Lys Glu Met Phe Asn Ser Lys Van Damme et al., 2009
N-acetylserotonin O-methyltransferase-like protein O95671 1-621 Peptide-Asp233+Thr-Peptide N MS Pro Ala Ala Asp Thr Phe Glu Asp Van Damme et al., 2010
N-acetyltransferase 10 Q8K224 1-1024 peptide-Glu676+Ala-peptide P MS Val Ser Ser Glu Ala Val Ser Leu Van Damme et al., 2009
N-acetyltransferase ESCO2 Q56NI9 1-601 Peptide-Asp243+Ser-Peptide N MS Val Ile Glu Asp Ser Asp Val Glu Van Damme et al., 2010
NAD-dependent deacetylase sirtuin-1 Q96EB6 2-747 Peptide-Asn155+Gly-Peptide N MS Ile Ile Thr Asn Gly Phe His Ser Van Damme et al., 2010
Nascent polypeptide-associated complex subunit alpha Q13765 1-215 Peptide-Asp60+Glu-Peptide N MS Ala Glu Ile Asp Glu Glu Pro Val Van Damme et al., 2010
Nascent polypeptide-associated complex subunit alpha Q13765 1-215 peptide-Glu58+Ile-peptide P MS Ala Ala Ala Glu Ile Asp Glu Glu Van Damme et al., 2009
Nascent polypeptide-associated complex subunit alpha Q60817 1-215 peptide-Glu58+Ile-peptide P MS Ala Ala Ala Glu Ile Asp Glu Glu Van Damme et al., 2009
Nascent polypeptide-associated complex subunit alpha, muscle-specific form P70670 1-2187 peptide-Glu2030+Ile-peptide P MS Ala Ala Ala Glu Ile Asp Glu Glu Van Damme et al., 2009
negative elongation factor E P19426 1-375 peptide-Asp117+Glu-peptide N MS Met Ser Ala Asp Glu Asp Leu Gln Van Damme et al., 2009 25844
Negative elongation factor E P18615 1-380 Peptide-Asp149+Gly-Peptide N MS Leu Gly Pro Asp Gly Glu Glu Ala Van Damme et al., 2010
Nesprin-1 Q8NF91 1-8797 peptide-Asp6568+Glu-peptide P MS Asp Met Tyr Asp Glu Leu Met Met Van Damme et al., 2009
Neurogenic locus notch homolog protein 1 P46531 19-2555 peptide-Asp1833+Leu-peptide P CS Val Leu Pro Asp Leu Asp Asp Gln Loeb et al., 2006
Neurogenic locus notch homolog protein 1 P46531 19-2555 peptide-Asp1870+Cys-peptide P CS Val Asp Ala Asp Cys Met Asp Val Loeb et al., 2006
Neurogenic locus notch homolog protein 1 P46531 19-2555 peptide-Asp1912+Phe-peptide P CS Val Ile Ser Asp Phe Ile Tyr Gln Loeb et al., 2006
Neurogenic locus notch homolog protein 1 P46531 19-2555 peptide-Asp1972+Ala-peptide P CS Val Ser Ala Asp Ala Gln Gly Val Loeb et al., 2006
Neurogenic locus notch homolog protein 1 P46531 19-2555 peptide-Asp2082+His-peptide P CS Val Leu Leu Asp His Phe Ala Asn Loeb et al., 2006
Neuronal acetylcholine receptor subunit alpha-7 P36544 23-502 Peptide-Asp47+Ser-Peptide P CS Val Ala Asn Asp Ser Gln Pro Leu Gahring et al., 2001
NF-kappa-B-repressing factor O15226 1-690 Peptide-Asp103+Ser-Peptide N MS Tyr Thr Gln Asp Ser Phe Ser Ile Van Damme et al., 2010
NFATC2-interacting protein O09130 1-412 peptide-Asp50+Ser-peptide N MS Leu Val Ser Asp Ser Asp Glu Glu Van Damme et al., 2009 25845
NFATC2-interacting protein O09130 1-412 peptide-Asp78+Ser-peptide N MS Pro Glu Gln Asp Ser Asp Ser Asp Van Damme et al., 2009 25846
Niban-like protein 1 Q96TA1-2 1-733 Peptide-Asp615+Glu-Peptide N MS Val Val Gln Asp Glu Glu Val Gly Van Damme et al., 2010
Niban-like protein 1 Q96TA1 1-746 peptide-Asp628+Glu-peptide P MS Val Val Gln Asp Glu Glu Val Gly Van Damme et al., 2009
Nicotinamide phosphoribosyltransferase P43490 1-491 Peptide-Ser209+Ala-Peptide N MS Ile Gly Ala Ser Ala His Leu Val Van Damme et al., 2010
Ninein Q8N4C6 1-2090 Peptide-Lys463+Thr-Peptide N MS Glu Lys Ala Lys Thr Glu Glu Asn Van Damme et al., 2010
Ninjurin-2 Q9NZG7 1-142 peptide-Val40+Ala-peptide P MS Met Leu Asp Val Ala Leu Phe Met Van Damme et al., 2009
nipped-B-like protein Q6KCD5 1-2798 peptide-Asp1085+Glu-peptide N MS Ile Ser Ser Asp Glu Asp Asn Asp Van Damme et al., 2009 25847
Nipped-B-like protein Q6KC79 1-2804 Peptide-Asp560+Ser-Peptide N MS Ile Thr Gln Asp Ser Asp Ser Ile Van Damme et al., 2010
Nitric oxide synthase-interacting protein Q9Y314 1-301 peptide-Asp266+Lys-peptide P MS Val Thr Gly Asp Lys Leu Thr Asp Van Damme et al., 2009
noD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630042J20 product:hypothetical protein, f Q3TDB0 1-242 peptide-Asp109+Val-peptide N MS Ala Glu Asp Asp Val Gly Gly Glu Van Damme et al., 2009 25849
non-histone chromosomal protein HMG-14 P18608 2-96 peptide-Asp9+Gly-peptide N MS Val Ser Ala Asp Gly Ala Ala Lys Van Damme et al., 2009 25850
Non-POU domain-containing octamer-binding protein Q15233 1-471 Peptide-Asp130+Asn-Peptide N MS Val Glu Leu Asp Asn Met Pro Leu Van Damme et al., 2010
nop56 nucleolar protein 5A Q9D6Z1 1-580 peptide-Asp255+Ile-peptide N MS Met Gly Met Asp Ile Ser Ala Ile Van Damme et al., 2009 25857
Nuclear autoantigenic sperm protein P49321 2-788 Peptide-Asp171+Lys-Peptide N MS Pro Glu Thr Asp Lys Glu Gln Asp Van Damme et al., 2010
Nuclear autoantigenic sperm protein P49321 2-788 Peptide-Asp520+Met-Peptide N MS Leu Ala Trp Asp Met Leu Asp Leu Van Damme et al., 2010
Nuclear autoantigenic sperm protein P49321 2-788 Peptide-Leu668+Ala-Peptide N MS Val Ala Glu Leu Ala Leu Lys Ala Van Damme et al., 2010
Nuclear autoantigenic sperm protein P49321 2-788 Peptide-Ser678+Thr-Peptide N MS Val Glu Ser Ser Thr Ser Gly Phe Van Damme et al., 2010
Nuclear autoantigenic sperm protein P49321 2-788 Peptide-Asn758+Met-Peptide N MS Val Ser Glu Asn Met Glu Glu Glu Van Damme et al., 2010
Nuclear cap-binding protein subunit 2 P52298 1-156 Peptide-Asp12+Ser-Peptide N MS Leu Arg Ser Asp Ser Tyr Val Glu Van Damme et al., 2010
Nuclear export mediator factor NEMF O60524 1-1076 Peptide-Met721+Thr-Peptide N MS Val Glu Leu Met Thr Gln Val Asp Van Damme et al., 2010
Nuclear export mediator factor NEMF O60524 1-1076 Peptide-Asp769+Glu-Peptide N MS Glu Met Lys Asp Glu Gly Glu Glu Van Damme et al., 2010
Nuclear inhibitor of protein phosphatase 1 Q12972 1-351 peptide-Asp206+Asp-peptide P MS Phe Ser Glu Asp Asp Glu Ile Ile Van Damme et al., 2009
nuclear mitotic apparatus protein 1 Q14980 1-2115 peptide-Asp1705+Ala-peptide P Val Ala Thr Asp Ala Leu Lys Ser Casciola-Rosen et al., 1999 27170
nuclear mitotic apparatus protein 1 Q14980 1-2115 peptide-Asp411+Val-peptide P Val Leu Gly Asp Val Leu Gln Leu Andrade et al., 1998 3292
Nuclear mitotic apparatus protein 1 Q14980 1-2115 Peptide-Asp1723+Ser-Peptide N MS Leu Ser Ile Asp Ser Leu Asp Leu Van Damme et al., 2010
Nuclear pore complex protein Nup153 P49790 2-1475 Peptide-Asp90+Glu-Peptide N MS Val Tyr Ala Asp Glu Glu Ser Ser Van Damme et al., 2010
Nuclear pore complex protein Nup214 P35658 1-2090 Peptide-Thr987+Ser-Peptide N MS Val Ser Ser Thr Ser Ser Val Ser Van Damme et al., 2010
Nuclear receptor corepressor 1 O75376 1-2440 Peptide-Glu2122+Asn-Peptide N MS Val Ser Pro Glu Asn Leu Val Asp Van Damme et al., 2010
Nuclear RNA export factor 1 Q9UBU9 2-619 Peptide-Asp55+Asp-Peptide N MS Leu Glu Glu Asp Asp Gly Asp Val Van Damme et al., 2010
nuclease-sensitive element-binding protein 1 P62960 2-322 peptide-Asp256+Gly-peptide N MS Pro Arg Glu Asp Gly Asn Glu Glu Van Damme et al., 2009 22286
Nuclease-sensitive element-binding protein 1 P62960 2-322 peptide-Asp267+Glu-peptide N MS Asn Gln Gly Asp Glu Thr Gln Gly Van Damme et al., 2009 25852
Nuclease-sensitive element-binding protein 1 P67809 2-324 Peptide-Glu216+Val-Peptide N MS Val Gln Gly Glu Val Met Glu Gly Plasman et al., 2011
Nuclease-sensitive element-binding protein 1 P62960 2-322 peptide-Glu214+Val-peptide P MS Val Gln Gly Glu Val Met Glu Gly Van Damme et al., 2009
Nuclease-sensitive element-binding protein 1 P67809 2-324 peptide-Asp258+Gly-peptide P MS Pro Arg Glu Asp Gly Asn Glu Glu Van Damme et al., 2009
Nucleolar and coiled-body phosphoprotein 1 Q14978 1-699 Peptide-Lys647+Arg-Peptide N MS Phe Asp Ala Lys Arg Gly Ala Ala Van Damme et al., 2010
nucleolar complex protein 2 homolog Q9WV70 1-747 peptide-Asp128+Gly-peptide N MS Thr Glu Glu Asp Gly Gly Glu Asp Van Damme et al., 2009 25853
nucleolar complex protein 2 homolog Q9WV70 1-747 peptide-Asp672+Ser-peptide N MS Phe Glu Leu Asp Ser Ser Glu Gly Van Damme et al., 2009 25854
Nucleolar complex protein 3 homolog Q8WTT2 1-800 Peptide-Asp95+Asp-Peptide N MS Met Asp Glu Asp Asp Leu Gln Leu Van Damme et al., 2010
nucleolar GTP-binding protein 1 Q99ME9 2-634 peptide-Asp469+Ser-peptide N MS Tyr Asp Ser Asp Ser Glu Ser Glu Van Damme et al., 2009 25855
Nucleolar GTP-binding protein 1 Q9BZE4 2-634 Peptide-Asp530+Met-Peptide N MS Leu Gly Val Asp Met Asp Asp Lys Van Damme et al., 2010
Nucleolar protein 10 Q9BSC4 1-688 peptide-Asp224+Ser-peptide P MS Val Thr Ala Asp Ser Glu Ile Asn Van Damme et al., 2009
Nucleolar protein 14 P78316 1-857 Peptide-Asp343+Val-Peptide N MS Val Glu Glu Asp Val Gln Glu Glu Van Damme et al., 2010
Nucleolar protein 14 P78316 1-857 peptide-Asp251+Ala-peptide P MS Pro Lys Pro Asp Ala Tyr Asp Met Van Damme et al., 2009
Nucleolar protein 16 Q9Y3C1 1-178 Peptide-Glu100+Ala-Peptide N MS Leu Glu Ala Glu Ala Ser Leu Pro Van Damme et al., 2010
Nucleolar protein 56 O00567 1-594 Peptide-Glu429+Glu-Peptide N MS Val Gln Ala Glu Glu Ala Ala Ala Van Damme et al., 2010
Nucleolar protein 56 O00567 1-594 peptide-Asn464+Ser-peptide P MS Ser Ser Glu Asn Ser Ser Ser Thr Van Damme et al., 2009
Nucleolar protein 56 Q9D6Z1 1-580 peptide-Glu429+Glu-peptide P MS Val Gln Ala Glu Glu Ala Ala Ala Van Damme et al., 2009
Nucleolar protein 58 Q9Y2X3 1-529 Peptide-Asp373+Ala-Peptide N MS Ile Arg Tyr Asp Ala Phe Gly Glu Van Damme et al., 2010
Nucleolar protein 58 Q9Y2X3 1-529 Peptide-Asp378+Ser-Peptide N MS Phe Gly Glu Asp Ser Ser Ser Ala Van Damme et al., 2010
Nucleolar protein 58 Q9Y2X3 1-529 Peptide-Asp433+Ser-Peptide N MS Pro Ser Gly Asp Ser Thr Leu Pro Van Damme et al., 2010
Nucleolar protein 58 Q9Y2X3 1-529 peptide-Glu451+Asp-peptide P MS Val Asp Lys Glu Asp Glu Ile Thr Van Damme et al., 2009
nucleolar protein 5A Q9D6Z1 1-580 peptide-Asp237+Gly-peptide N MS Ile Thr Met Asp Gly Ala Lys Ala Van Damme et al., 2009 25856
nucleolar RNA helicase 2 Q9JIK5 1-851 peptide-Asp14+Gly-peptide N MS Leu Gly Ser Asp Gly Ala Glu Glu Van Damme et al., 2009 25858
nucleolar RNA helicase 2 Q9JIK5 1-851 peptide-Asp213+Ala-peptide N MS Ala Ser Gly Asp Ala Gly Glu Lys Van Damme et al., 2009 25859
Nucleolar RNA helicase 2 Q9NR30 1-783 Peptide-Asp8+Ala-Peptide N MS Leu Arg Ser Asp Ala Gly Leu Glu Van Damme et al., 2010
Nucleolar RNA helicase 2 Q9NR30 1-783 Peptide-Asp463+Ala-Peptide N MS Ile Lys Gln Asp Ala Gln Ser Leu Van Damme et al., 2010
nucleolar transcription factor 1 P17480 1-764 peptide-Asp220+Ala-peptide P Val Arg Pro Asp Ala Thr Thr Lys Casciola-Rosen et al., 1999
nucleolin P09405 2-707 peptide-Asp261+Asp-peptide N MS Glu Glu Glu Asp Asp Glu Asp Asp Van Damme et al., 2009 25860
nucleolin P19338 2-710 peptide-Asp441+Ala-peptide P MS Thr Glu Ala Asp Ala Glu Lys Thr Van Damme et al., 2009 22239
nucleolin P09405 2-707 peptide-Asp443+Ala-peptide N MS Ser Glu Ala Asp Ala Glu Lys Asn Van Damme et al., 2009 22240
nucleolin P19338 2-710 peptide-Asp407+Glu-peptide P MS Val Thr Gln Asp Glu Leu Lys Glu Van Damme et al., 2009 22241
nucleolin P09405 2-707 peptide-Asp409+Glu-peptide N MS Ile Thr Glu Asp Glu Leu Lys Glu Van Damme et al., 2009 22242
nucleolin P19338 2-710 peptide-Asp582+Thr-peptide P MS Leu Ser Glu Asp Thr Thr Glu Glu Van Damme et al., 2009 22243
Nucleolin P19338 2-710 Peptide-Glu408+Leu-Peptide N MS Thr Gln Asp Glu Leu Lys Glu Val Van Damme et al., 2010
Nucleolin P19338 2-710 Peptide-Lys429+Gly-Peptide N MS Gly Lys Ser Lys Gly Ile Ala Tyr Van Damme et al., 2010
Nucleolin P19338 2-710 Peptide-Ala432+Tyr-Peptide N MS Lys Gly Ile Ala Tyr Ile Glu Phe Van Damme et al., 2010
Nucleolin P09405 2-707 peptide-Asp579+Thr-peptide P MS Leu Ser Glu Asp Thr Thr Glu Glu Van Damme et al., 2009
Nucleolin P19338 2-710 peptide-Glu435+Phe-peptide P MS Ala Tyr Ile Glu Phe Lys Thr Glu Van Damme et al., 2009
Nucleophosmin P06748 1-294 Peptide-Asp161+Glu-Peptide N MS Leu Ala Ala Asp Glu Asp Asp Asp Van Damme et al., 2010
Nucleosome assembly protein 1-like 1 P55209 2-388 Peptide-Asp15+Leu-Peptide N MS Leu Asp Gln Asp Leu Asp Asp Val Van Damme et al., 2010
Nucleosome assembly protein 1-like 1 P55209 2-388 Peptide-Asp57+Gly-Peptide N MS Glu Arg Leu Asp Gly Leu Val Glu Van Damme et al., 2010
Nucleosome assembly protein 1-like 1 P55209 2-388 Peptide-Asp295+Ser-Peptide N MS Val Ser Asn Asp Ser Phe Phe Asn Van Damme et al., 2010
Nucleosome assembly protein 1-like 1 P55209 1-388 peptide-Asp350+Asp-peptide P MS Ile Glu Asp Asp Asp Asp Asp Tyr Van Damme et al., 2009
Nucleosome-remodeling factor subunit BPTF Q12830 1-3046 Peptide-Asp1595+Val-Peptide N MS Ile Asn Gly Asp Val Ile Met Glu Van Damme et al., 2010
Nucleus accumbens-associated protein 1 Q96RE7 1-527 Peptide-Asp339+Leu-Peptide N MS Val Arg Gln Asp Leu Ala Ser Leu Van Damme et al., 2010
Occludin/ELL domain-containing protein 1 Q9H607 1-264 Peptide-Arg217+Glu-Peptide N MS Arg Val Trp Arg Glu Phe Glu Met Van Damme et al., 2010
opioid growth factor receptor Q99PG2 1-633 peptide-Asp329+Ser-peptide N MS Leu Ser Gly Asp Ser Gly Thr Ala Van Damme et al., 2009 25861
Opsin-3 Q9H1Y3 1-402 peptide-Ala341+Gly-peptide P MS Leu Pro Ala Ala Gly Ser Glu Met Van Damme et al., 2009
OTU domain-containing protein 6B Q8K2H2 1-294 peptide-Glu7+Glu-peptide P MS Val Val Ala Glu Glu Leu Asp Asp Van Damme et al., 2009
otubain-1 Q7TQI3 1-271 peptide-Asp27+Glu-peptide N MS Leu Ala Tyr Asp Glu Ala Ile Met Van Damme et al., 2009 25930
Oxysterol-binding protein-related protein 3 Q9H4L5 1-887 Peptide-Asp368+Ala-Peptide N MS Met Glu Gln Asp Ala Ser Ser Ser Van Damme et al., 2010
Oxysterol-binding protein-related protein 3 Q9H4L5 1-887 peptide-Asp485+Asn-peptide P MS Leu Ser Leu Asp Asn Leu Ser Asn Van Damme et al., 2009
p21-activated protein kinase-interacting protein 1 Q9NWT1 1-392 Peptide-Asp357+Ser-Peptide N MS Leu Thr Gly Asp Ser Lys Lys Ala Van Damme et al., 2010
P2X purinoceptor 1 P51575 1-399 Peptide-Asp154+Thr-Peptide P CS Ala Phe Asn Asp Thr Val Lys Thr Gahring et al., 2001
Paired amphipathic helix protein Sin3a Q96ST3 1-1273 Peptide-Asp547+Tyr-Peptide N MS Met Glu Ile Asp Tyr Ala Ser Cys Van Damme et al., 2010
pallidin Q9R0C0 1-172 peptide-Asp35+Glu-peptide N MS Thr Ser Pro Asp Glu Gly Leu Ile Van Damme et al., 2009 25862
Parafibromin Q6P1J9 2-531 Peptide-Asp200+Leu-Peptide N MS Ile Lys Thr Asp Leu Asp Asp Asp Van Damme et al., 2010
Parafibromin Q6P1J9 2-531 Peptide-Asn272+Ala-Peptide N MS Pro Ala Pro Asn Ala Ala Pro Val Van Damme et al., 2010
PC4 and SFRS1-interacting protein Q99JF8 1-528 peptide-Asp431+Ser-peptide N MS Gly Glu Gly Asp Ser Val Ile Thr Van Damme et al., 2009 25863
PDZ and LIM domain protein 2 Q8R1G6 1-349 peptide-Asp216+Ser-peptide N MS Leu Glu Glu Asp Ser Glu Val Phe Van Damme et al., 2009 25864
PDZ and LIM domain protein 5 Q96HC4 2-596 Peptide-Asp188+Gln-Peptide N MS Leu Ser Ala Asp Gln Ser Pro Ser Van Damme et al., 2010
PDZ and LIM domain protein 5 Q96HC4 2-596 Peptide-Glu215+Thr-Peptide N MS Val Cys Ser Glu Thr Ser Gln Glu Van Damme et al., 2010
Peptidyl-prolyl cis-trans isomerase CWC27 homolog Q6UX04 1-472 Peptide-Asp270+Glu-Peptide N MS Ala Glu His Asp Glu Tyr Ile Asp Van Damme et al., 2010
Peptidyl-prolyl cis-trans isomerase CWC27 homolog Q6UX04 1-472 Peptide-Asp440+Ser-Peptide N MS Ser Met Gln Asp Ser Asp Thr Phe Van Damme et al., 2010
Peptidyl-prolyl cis-trans isomerase CWC27 homolog Q6UX04 1-472 Peptide-Asp442+Thr-Peptide N MS Gln Asp Ser Asp Thr Phe Glu Ile Van Damme et al., 2010
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 2-108 Peptide-Asp80+Tyr-Peptide N MS Ile Ser Pro Asp Tyr Ala Tyr Gly Van Damme et al., 2010
peptidyl-prolyl cis-trans isomerase G Q13427 1-754 peptide-Asp384+Lys-peptide P MS Ile Lys Gly Asp Lys Ser Glu Leu Van Damme et al., 2009
Peptidyl-prolyl cis-trans isomerase-like 4 Q8WUA2 1-492 Peptide-Asp194+Glu-Peptide N MS Ile Gly Ala Asp Glu Glu Ile Asp Van Damme et al., 2010
Peregrin P55201 1-1214 peptide-Asp102+Leu-peptide P CS Val Glu Val Asp Leu His Gly Arg Loeb et al., 2006
pericentriolar material 1 protein Q9R0L6 1-2025 peptide-Asp1467+Asp-peptide N MS Val Thr Thr Asp Asp Glu Thr Phe Van Damme et al., 2009 25865
pericentriolar material 1 protein Q9R0L6 1-2025 peptide-Asp1767+Val-peptide N MS Val Arg Ser Asp Val Ser Asp Gln Van Damme et al., 2009 25866
Pericentriolar material 1 protein Q15154 1-2024 peptide-Ser692+Ala-peptide P MS Ile Ser Ala Ser Ala Ser Asn Leu Van Damme et al., 2009
Periodic tryptophan protein 2 homolog Q15269 1-919 peptide-Asp675+Ala-peptide P MS Ile Asp Gln Asp Ala Gly Gln Glu Van Damme et al., 2009
PERQ amino acid-rich with GYF domain-containing protein 2 Q6Y7W6 1-1299 peptide-Glu365+Ala-peptide P MS Val Gly Val Glu Ala Ser Glu Glu Van Damme et al., 2009
PERQ amino acid-rich with GYF domain-containing protein 2 Q6Y7W6 1-1299 peptide-Asn1282+Ala-peptide P MS Phe Ser Val Asn Ala Ser Ser Glu Van Damme et al., 2009
Pescadillo homolog O00541 1-588 Peptide-Met512+Ala-Peptide N MS Pro Arg Val Met Ala Gly Thr Leu Van Damme et al., 2010
Pescadillo homolog O00541 1-588 Peptide-Asp298+Glu-Peptide N MS Ala Glu Val Asp Glu Phe Pro Thr Van Damme et al., 2010
Pescadillo homolog O00541 1-588 peptide-Asp483+Ala-peptide P MS Glu Glu Glu Asp Ala Glu Ala Gly Van Damme et al., 2009
PHD finger protein 13 Q86YI8 1-300 Peptide-Asp187+Gln-Peptide N MS Val Ser Pro Asp Gln Val Lys Glu Van Damme et al., 2010
PHD finger protein 6 Q8IWS0 1-365 Peptide-Asp188+Glu-Peptide N MS His Gly Thr Asp Glu Met Glu Ser Van Damme et al., 2010
Phenylalanine--tRNA ligase alpha subunit Q9Y285 2-508 peptide-Asp220+Ser-peptide P MS Val Leu Pro Asp Ser Gly His Leu Van Damme et al., 2009
Phosducin-like protein 3 Q8BVF2 1-240 peptide-Glu55+Glu-peptide P MS Met Thr Leu Glu Glu Leu Glu Glu Van Damme et al., 2009
Phosphatidate phosphatase LPIN2 Q92539 1-896 Peptide-Asp188+Asp-Peptide N MS Val Ser Ser Asp Asp Asp Lys Gly Van Damme et al., 2010
Phosphoglycerate kinase 1 P00558 2-417 Peptide-Asp10+Lys-Peptide N MS Leu Thr Leu Asp Lys Leu Asp Val Van Damme et al., 2010
Phosphoglycerate kinase 1 P00558 2-417 Peptide-Glu103+Val-Peptide N MS Val Gly Pro Glu Val Glu Lys Ala Van Damme et al., 2010
Phosphoglycerate kinase 1 P00558 2-417 Peptide-Asp315+Cys-Peptide N MS Met Gly Leu Asp Cys Gly Pro Glu Van Damme et al., 2010
Phosphoribosylformylglycinamidine synthase O15067 1-1338 Peptide-Asp474+Asn-Peptide N MS Val Gln Gly Asp Asn Thr Ser Asp Van Damme et al., 2010
Phosphorylated adapter RNA export protein Q9H814 1-394 Peptide-Glu133+Leu-Peptide N MS Val Ala Thr Glu Leu Gly Ile Leu Van Damme et al., 2010
Phosphorylated adapter RNA export protein Q9JJT9 2-385 peptide-Glu123+Leu-peptide P MS Val Ala Thr Glu Leu Gly Ile Leu Van Damme et al., 2009
PIN2/TERF1-interacting telomerase inhibitor 1 Q96BK5 1-328 Peptide-Asp311+Ala-Peptide N MS Ile Ala Glu Asp Ala Thr Leu Glu Van Damme et al., 2010
pinin O35691 2-725 peptide-Asp347+Ala-peptide N MS Val His Ser Asp Ala Glu Lys Glu Van Damme et al., 2009 25867
Plakophilin-3 Q9Y446 1-797 peptide-Pro23+Ser-peptide P MS Leu Ala Leu Pro Ser Asp Leu Gln Van Damme et al., 2009
plasminogen activator inhibitor 1 RNA-binding protein Q9CY58 1-407 peptide-Asp120+Gly-peptide N MS Leu Gln Gly Asp Gly Lys Leu Ile Van Damme et al., 2009 25870
Plasminogen activator inhibitor 1 RNA-binding protein Q8NC51 2-408 peptide-Asp337+Ser-peptide P MS His Ala Glu Asp Ser Val Met Asp Van Damme et al., 2009
Plasminogen activator inhibitor 1 RNA-binding protein Q8NC51 2-408 peptide-Asp397+Val-peptide P MS Ser Ala Pro Asp Val Asp Asp Pro Van Damme et al., 2009
Pleckstrin homology domain-containing family F member 2 Q9H8W4 1-249 Peptide-Asp88+Ser-Peptide N MS Val Thr Ile Asp Ser Ile Lys Asp Van Damme et al., 2010
PMS1 protein homolog 1 P54277 1-932 peptide-Asp496+Glu-peptide P Ile Ser Ala Asp Glu Trp Ser Arg Casciola-Rosen et al., 1999 27174
PMS1 protein homolog 2 P54278 1-862 peptide-Ser494+Gly-peptide P Val Glu Lys Asp Ser Gly His Gly Casciola-Rosen et al., 1999
poly [ADP-ribose] polymerase 1 P09874 2-1014 peptide-Asp536+Ser-peptide P Val Asp Pro Asp Ser Gly Leu Glu Casciola-Rosen et al., 1999 3293
Poly [ADP-ribose] polymerase 8 Q8N3A8 1-854 Peptide-Asp610+Ser-Peptide N MS Lys Ala Leu Asp Ser Ile Thr Ser Van Damme et al., 2010
Poly(A) polymerase gamma Q9BWT3 1-736 Peptide-Glu691+Ser-Peptide N MS Ile Gly Gly Glu Ser Met Pro Ile Van Damme et al., 2010
Poly(rC)-binding protein 1 Q15365 1-356 peptide-Asp136+Met-peptide P MS Val Ala Gly Asp Met Leu Pro Asn Van Damme et al., 2009
Poly(rC)-binding protein 2 Q15366 1-365 peptide-Asp136+Met-peptide P MS Val Ala Gly Asp Met Leu Pro Asn Van Damme et al., 2009
Poly(rC)-binding protein 3 P57721 1-371 Peptide-Asp168+Met-Peptide N MS Val Ala Gly Asp Met Leu Pro Asn Van Damme et al., 2010
Polyadenylate-binding protein 1 P11940 1-636 peptide-Asp589+Asn-peptide P CS Leu Glu Ile Asp Asn Ser Glu Leu Loeb et al., 2006
Polyadenylate-binding protein 4 Q13310 1-644 Peptide-Asp479+Phe-Peptide N MS Leu Ala Met Asp Phe Gly Gly Ala Van Damme et al., 2010
Polycomb complex protein BMI-1 P35226 1-326 Peptide-Asp252+Ser-Peptide N MS Leu Glu Ser Asp Ser Gly Ser Asp Van Damme et al., 2010
Polycomb protein EED O75530 1-441 peptide-Asp142+Ala-peptide P MS Val Asp Ala Asp Ala Asp Glu Asn Van Damme et al., 2009
polyglutamine-binding protein 1 Q91VJ5 1-263 peptide-Asp32+Tyr-peptide N MS Ile Ala Glu Asp Tyr Asp Asp Asp Van Damme et al., 2009 22247
Polyglutamine-binding protein 1 O60828 2-265 Peptide-Glu31+Asp-Peptide N MS Ile Ile Ala Glu Asp Tyr Asp Asp Van Damme et al., 2010
Polyglutamine-binding protein 1 O60828 2-265 peptide-Asp32+Tyr-peptide P MS Ile Ala Glu Asp Tyr Asp Asp Asp Van Damme et al., 2009
Polyglutamine-binding protein 1 Q91VJ5 2-263 peptide-Glu31+Asp-peptide P MS Ile Ile Ala Glu Asp Tyr Asp Asp Van Damme et al., 2009
Polymerase I and transcript release factor Q6NZI2 1-390 Peptide-Asp204+Glu-Peptide N MS Leu Ser Ser Asp Glu Ala Val Glu Van Damme et al., 2010
polypyrimidine tract-binding protein 1 P17225 1-527 peptide-Asp7+Ile-peptide N MS Ile Val Pro Asp Ile Ala Val Gly Van Damme et al., 2009 22250
polypyrimidine tract-binding protein 1 P26599 1-531 peptide-Asp172+Ala-peptide P MS Ala Ala Val Asp Ala Gly Met Ala Van Damme et al., 2009 22249
Polypyrimidine tract-binding protein 1 P26599 1-531 Peptide-Ser167+Ala-Peptide N MS Leu Ala Ala Ser Ala Ala Ala Val Van Damme et al., 2010
Polypyrimidine tract-binding protein 1 P17225 1-527 peptide-Asp171+Ala-peptide P MS Ala Ala Val Asp Ala Gly Met Ala Van Damme et al., 2009
Polypyrimidine tract-binding protein 1 P26599 1-531 peptide-Asp7+Ile-peptide P MS Ile Val Pro Asp Ile Ala Val Gly Van Damme et al., 2009
Polypyrimidine tract-binding protein 1 P26599 1-531 peptide-Met175+Ala-peptide P MS Asp Ala Gly Met Ala Met Ala Gly Van Damme et al., 2009
Potassium voltage-gated channel subfamily A member 4 P22459 1-653 Peptide-Asp353+Thr-Peptide P CS Leu Leu Asn Asp Thr Ser Ala Pro Gahring et al., 2001
prcc protein Q05CA9 1-485 peptide-Asp385+Ala-peptide N MS Ile Ala Pro Asp Ala Ser Phe Ile Van Damme et al., 2009 25816
Pre-mRNA 3'-end-processing factor FIP1 Q6UN15 1-594 Peptide-Glu214+Asp-Peptide N MS Ile Thr Ala Glu Asp Cys Thr Met Van Damme et al., 2010
Pre-mRNA 3'-end-processing factor FIP1 Q6UN15 1-594 Peptide-Glu586+Ser-Peptide N MS Pro Glu Gln Glu Ser Thr Glu Ala Van Damme et al., 2010
Pre-mRNA 3'-end-processing factor FIP1 Q6UN15 1-594 Peptide-Glu584+Gln-Peptide N MS Pro Ala Pro Glu Gln Glu Ser Thr Van Damme et al., 2010
Pre-mRNA-processing factor 40 homolog A O75400 1-957 Peptide-Asn722+Ser-Peptide N MS Leu Ala Phe Asn Ser Leu Leu Glu Van Damme et al., 2010
Pre-mRNA-processing factor 40 homolog B Q6NWY9 1-871 peptide-Asn605+Ser-peptide P MS Leu Thr Phe Asn Ser Leu Leu Glu Van Damme et al., 2009
Pre-mRNA-processing factor 6 O94906 1-941 Peptide-Asp184+Ser-Peptide N MS Pro Val Pro Asp Ser Phe Phe Ala Van Damme et al., 2010
Pre-mRNA-processing-splicing factor 8 Q6P2Q9 2-2335 Peptide-Asp23+Tyr-Peptide N MS Pro Leu Pro Asp Tyr Met Ser Glu Van Damme et al., 2010
pre-mRNA-splicing factor 38A Q4FK66 1-312 peptide-Asp187+Met-peptide N MS Leu Glu Glu Asp Met Asp Asp Val Van Damme et al., 2009 25874
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 Q92620 2-1227 peptide-Asp52+Leu-peptide P MS Leu Gly Leu Asp Leu Leu Ala Ser Van Damme et al., 2009
Pre-mRNA-splicing factor SLU7 O95391 1-586 Peptide-Asp152+Glu-Peptide N MS Ile Ala Pro Asp Glu His Val Gln Van Damme et al., 2010
Pre-mRNA-splicing factor SYF2 O95926 2-243 Peptide-Asp12+Ser-Peptide N MS Val Leu Val Asp Ser Ala Glu Glu Van Damme et al., 2010
Probable ATP-dependent RNA helicase DDX10 Q13206 1-875 Peptide-Asp632+Ala-Peptide N MS Glu Glu Glu Asp Ala Asp Phe Leu Van Damme et al., 2010
Probable ATP-dependent RNA helicase DDX17 Q92841 1-729 peptide-Asp476+Val-peptide P MS Ile Ala Thr Asp Val Ala Ser Arg Van Damme et al., 2009
probable ATP-dependent RNA helicase DDX17 isoform 2 Q92841-1 1-650 Peptide-Asp397+Val-Peptide N MS Ile Ala Thr Asp Val Ala Ser Arg Van Damme et al., 2010
Probable ATP-dependent RNA helicase DDX23 Q9BUQ8 1-820 Peptide-Asp281+Thr-Peptide N MS Ala Ser Glu Asp Thr Ser Ile Asp Van Damme et al., 2010
Probable ATP-dependent RNA helicase DDX27 Q96GQ7 1-796 Peptide-Asp103+Val-Peptide N MS Ala Leu Ala Asp Val Met Ser Gln Van Damme et al., 2010
Probable ATP-dependent RNA helicase DDX27 Q96GQ7 1-796 Peptide-Asp187+Thr-Peptide N MS Thr Lys Ala Asp Thr Leu Lys Val Plasman et al., 2011
Probable ATP-dependent RNA helicase DDX31 Q9H8H2 1-851 peptide-Asp798+Ile-peptide P MS Met Glu Ala Asp Ile Ala Lys Val Van Damme et al., 2009
Probable ATP-dependent RNA helicase DDX41 Q9UJV9 1-622 Peptide-Glu411+Val-Peptide N MS Val Ile Gln Glu Val Glu Tyr Val Van Damme et al., 2010
Probable ATP-dependent RNA helicase DDX46 Q7L014 1-1031 Peptide-Asp814+Glu-Peptide N MS Val Asp Ile Asp Glu Gln Ile Glu Van Damme et al., 2010
Probable ATP-dependent RNA helicase DDX46 Q7L014 1-1031 peptide-Asp803+Ser-peptide P MS Gly Leu Gln Asp Ser Asp Asp Glu Van Damme et al., 2009
Probable ATP-dependent RNA helicase DDX47 Q9H0S4 2-455 peptide-Asp393+Asp-peptide P MS Pro Thr Gln Asp Asp Glu Val Met Van Damme et al., 2009
Probable ATP-dependent RNA helicase DDX5 P17844 1-614 Peptide-Asp322+Val-Peptide N MS Val Cys His Asp Val Glu Lys Asp Van Damme et al., 2010
Probable ATP-dependent RNA helicase DDX52 Q9Y2R4 1-599 Peptide-Met109+Ser-Peptide N MS Ile Gln Trp Met Ser Ser Val Glu Van Damme et al., 2010
Probable ATP-dependent RNA helicase DDX56 Q9NY93 1-547 Peptide-Asp316+Ala-Peptide N MS Ile Ala Thr Asp Ala Glu Val Leu Van Damme et al., 2010
Probable ATP-dependent RNA helicase DHX37 Q8IY37 1-1157 Peptide-Asp538+His-Peptide N MS Ile Asn Leu Asp His Tyr Ser Val Van Damme et al., 2010
Probable ATP-dependent RNA helicase YTHDC2 Q9H6S0 1-1430 Peptide-Asp1257+Ser-Peptide N MS Lys Ser Thr Asp Ser Ser Ser Tyr Van Damme et al., 2010
Probable E3 ubiquitin-protein ligase HERC1 Q15751 1-4861 Peptide-Asp2841+Ala-Peptide N MS Pro Ser Ala Asp Ala Ala Glu Met Van Damme et al., 2010
Probable global transcription activator SNF2L2 P51531 1-1590 Peptide-Asp580+Gly-Peptide N MS Leu Gly Pro Asp Gly Glu Pro Ile Van Damme et al., 2010
Probable global transcription activator SNF2L2 P51531 1-1590 peptide-Asp1288+Ala-peptide P MS Ile Lys Asp Asp Ala Glu Val Glu Van Damme et al., 2009
Probable histidine--tRNA ligase, mitochondrial P49590 34-506 peptide-Glu487+Val-peptide P MS Ser Arg Glu Glu Val Ala Ile Lys Van Damme et al., 2009
probable histone-lysine N-methyltransferase NSD2 Q8BVE8 1-1365 peptide-Asp375+Ser-peptide N MS Glu Met Val Asp Ser Ser Gly Ala Van Damme et al., 2009 25875
probable ribosome biogenesis protein RLP24 Q99L28 1-163 peptide-Asp66+Asn-peptide N MS Leu Thr Val Asp Asn Ser Phe Glu Van Damme et al., 2009 25876
Probable ribosome biogenesis protein RLP24 Q9UHA3 1-163 Peptide-Asp156+Val-Peptide N MS Leu Gln Glu Asp Val Asp Met Glu Van Damme et al., 2010
Probable rRNA-processing protein EBP2 Q99848 1-306 Peptide-Ser83+Glu-Peptide N MS Ile Gly Gly Ser Glu Ala Pro Ala Van Damme et al., 2010
Probable rRNA-processing protein EBP2 Q99848 1-306 peptide-Asp216+Gln-peptide P MS Leu Glu Gly Asp Gln Lys Pro Leu Van Damme et al., 2009
probable UPF0334 kinase-like protein C1orf57 homolog Q9CQA9 1-190 peptide-Asp86+Ser-peptide N MS Val Asn Leu Asp Ser Phe Glu Gln Van Damme et al., 2009 25877
proliferation-associated protein 2G4 P50580 2-394 peptide-Asp227+Val-peptide N MS Tyr Ala Val Asp Val Leu Val Ser Van Damme et al., 2009 25878
proliferation-associated protein 2G4 P50580 2-394 peptide-Asp341+Leu-peptide N MS Phe Glu Pro Asp Leu Tyr Lys Ser Van Damme et al., 2009 25879
Proliferation-associated protein 2G4 Q9UQ80 2-394 Peptide-Glu14+Asp-Peptide N MS Thr Ile Ala Glu Asp Leu Val Val Van Damme et al., 2010
Proliferation-associated protein 2G4 Q9UQ80 2-394 peptide-Asp341+Leu-peptide P MS Phe Glu Pro Asp Leu Tyr Lys Ser Van Damme et al., 2009
Proliferation-associated protein 2G4 Q9UQ80 2-394 peptide-Glu385+Thr-peptide P MS Thr Ser Gly Glu Thr Leu Glu Glu Van Damme et al., 2009
Proline-, glutamic acid- and leucine-rich protein 1 Q8IZL8 2-1130 Peptide-Glu1029+Ala-Peptide N MS Leu Ala Pro Glu Ala Leu Pro Ser Van Damme et al., 2010
Proline-rich protein PRCC Q92733 1-491 Peptide-Asp385+Ala-Peptide N MS Ile Ala Pro Asp Ala Ser Phe Ile Van Damme et al., 2010
Prolyl 3-hydroxylase 1 Q32P28 23-736 Peptide-Asp36+Leu-Peptide N MS Val Thr Pro Asp Leu Leu Phe Ala Van Damme et al., 2010
Prostaglandin E synthase 3 Q15185 1-160 Peptide-Asp133+Glu-Peptide N MS Met Gly Gly Asp Glu Asp Val Asp Van Damme et al., 2010
Prostaglandin E synthase 3 Q15185 1-160 Peptide-Asp142+Gly-Peptide N MS Pro Glu Val Asp Gly Ala Asp Asp Van Damme et al., 2010
Prostaglandin E synthase 3 Q15185 1-160 peptide-Asp102+Phe-peptide P MS Leu Ser Val Asp Phe Asn Asn Trp Van Damme et al., 2009
Protease-associated domain-containing protein 1 Q9BSG0 22-188 Peptide-Asp122+Ser-Peptide N MS Val Asp Asn Asp Ser Phe Tyr Val Van Damme et al., 2010
Proteasome subunit alpha type-4 P25789 1-261 Peptide-Asp82+Ala-Peptide N MS Ile Thr Ser Asp Ala Asn Val Leu Van Damme et al., 2010
Proteasome subunit alpha type-7 O14818 1-248 peptide-Phe73+Ala-peptide P MS Cys Met Ala Phe Ala Gly Leu Thr Van Damme et al., 2009
Protein AATF Q9NY61 2-560 Peptide-Asp49+Phe-Peptide N MS Gly Glu Gly Asp Phe Leu Val Val Van Damme et al., 2010
Protein AATF Q9NY61 2-560 Peptide-Asn313+Ala-Peptide N MS Thr Lys Pro Asn Ala Gly Ser Glu Van Damme et al., 2010
Protein AATF Q9NY61 1-560 peptide-Glu432+Ser-peptide P MS Pro Val Pro Glu Ser Leu Pro Gly Van Damme et al., 2009
Protein angel homolog 1 Q9UNK9 1-670 Peptide-Asp44+Phe-Peptide N MS Val Glu Gly Asp Phe Ala Met Ala Van Damme et al., 2010
Protein arginine N-methyltransferase 3 O60678 1-531 Peptide-Asp211+Leu-Peptide N MS Val Ile Ala Asp Leu Gln Glu Asp Van Damme et al., 2010
Protein arginine N-methyltransferase 5 O14744 2-637 Peptide-Arg68+Ser-Peptide N MS Pro Gln Thr Arg Ser Asp Leu Leu Van Damme et al., 2010
Protein BTG3 Q14201 1-252 Peptide-Asp141+Tyr-Peptide N MS Val Thr Ser Asp Tyr His Ser Gly Van Damme et al., 2010
Protein DGCR14 Q96DF8 1-476 Peptide-Asp283+Gly-Peptide N MS Val Gly Pro Asp Gly Lys Glu Leu Van Damme et al., 2010
Protein disulfide-isomerase A6 Q15084 20-440 peptide-Asp433+Asp-peptide P MS Val Glu Leu Asp Asp Leu Gly Lys Van Damme et al., 2009
Protein dpy-30 homolog Q9C005 1-99 Met-Glu-Pro-Glu4+Gln-Peptide N MS Met Glu Pro Glu Gln Met Leu Glu Van Damme et al., 2010
protein FAM111A Q9D2L9 1-613 peptide-Asp41+Ser-peptide N MS Val Lys Val Asp Ser Lys Lys Met Van Damme et al., 2009 25880
Protein FAM122B Q7Z309 1-247 Peptide-Asp190+Ala-Peptide N MS Leu Ser Pro Asp Ala Ala Gln Leu Van Damme et al., 2010
Protein FAM160B1 Q5W0V3 1-765 peptide-Asp192+Thr-peptide P MS Ile Ser Glu Asp Thr Leu Lys Gly Van Damme et al., 2009
Protein FAM161A Q3B820 1-660 peptide-Asp479+Glu-peptide P MS Ile Glu Ala Asp Glu Glu Asn Leu Van Damme et al., 2009
Protein FAM50A Q14320 1-339 Peptide-Asp163+Thr-Peptide N MS Pro Asp Val Asp Thr Ser Phe Leu Van Damme et al., 2010
Protein FAM83A Q86UY5 1-434 Peptide-Arg26+Ala-Peptide N MS Arg Pro Ala Arg Ala Asp Phe Ser Van Damme et al., 2010
Protein GRINL1B Q9BZD3 1-368 Peptide-Asp189+Asn-Peptide N MS Ser Ser Phe Asp Asn Leu Phe Ile Van Damme et al., 2010
protein HEXIM1 Q8R409 1-356 peptide-Asp255+Gly-peptide N MS Met Gly Gly Asp Gly Ser Glu Phe Van Damme et al., 2009 25756
Protein IWS1 homolog Q8C1D8 1-766 peptide-Asp9+Gln-peptide N MS Tyr Ser Gly Asp Gln Ser Asp Asp Van Damme et al., 2009 25817
Protein IWS1 homolog Q8C1D8 1-766 peptide-Asp171+Ser-peptide N MS Gln Ala Ser Asp Ser Glu Asn Glu Van Damme et al., 2009 25818
Protein IWS1 homolog Q8C1D8 1-766 peptide-Asp457+Ser-peptide N MS Glu Ala Glu Asp Ser Asp Ser Asp Van Damme et al., 2009 25820
Protein KIAA1967 Q8N163 1-923 Peptide-Asp469+Ala-Peptide N MS Gln Ala Pro Asp Ala Leu Glu Gln Van Damme et al., 2010
Protein KIAA1967 Q8N163 1-923 Peptide-Asp292+Ala-Peptide N MS Ala Ala Pro Asp Ala Gly Ala Glu Van Damme et al., 2010
Protein kinase C alpha type P17252 2-672 peptide-Asp378+Asp-peptide P MS Val Ile Gln Asp Asp Asp Val Glu Van Damme et al., 2009
Protein kinase C beta type P05771 2-671 Peptide-Asp381+Asp-Peptide N MS Val Ile Gln Asp Asp Asp Val Glu Van Damme et al., 2010
Protein kinase C delta type Q05655 1-676 peptide-Asp388+Asp-peptide P MS Val Leu Ile Asp Asp Asp Val Glu Van Damme et al., 2009
Protein kinase C theta type Q04759 1-706 peptide-Asp419+Asp-peptide P MS Val Leu Met Asp Asp Asp Val Glu Van Damme et al., 2009
Protein KRI1 homolog Q8N9T8 1-709 Peptide-Met119+Tyr-Peptide N MS Val Arg Pro Met Tyr Leu Lys Asp Van Damme et al., 2010
Protein KRI1 homolog Q8N9T8 1-709 Peptide-Asp312+Ser-Peptide N MS Glu Glu Pro Asp Ser Ala Ser Val Van Damme et al., 2010
Protein KRI1 homolog Q8N9T8 1-709 peptide-Glu386+Glu-peptide P MS Leu Gly Leu Glu Glu Gly Asp Leu Van Damme et al., 2009
Protein LAS1 homolog Q9Y4W2 1-734 Peptide-Phe611+Ser-Peptide N MS Val Gly Pro Phe Ser Thr Gly Gln Van Damme et al., 2010
Protein LLP homolog Q9BRT6 1-129 Peptide-Lys19+Lys-Peptide N MS Glu Lys Arg Lys Lys Asn Ala Pro Van Damme et al., 2010
Protein LLP homolog Q9BRT6 1-129 Peptide-Asp38+Val-Peptide N MS Leu Asp Gly Asp Val Leu Met Lys Van Damme et al., 2010
Protein LSM14 homolog A Q8ND56 1-463 Peptide-Glu32+Asn-Peptide N MS Ile Asp Thr Glu Asn Ser Thr Val Van Damme et al., 2010
Protein LSM14 homolog B Q9BX40 1-385 Peptide-Asp252+Phe-Peptide N MS Phe Glu Gly Asp Phe Asp Phe Glu Van Damme et al., 2010
Protein LSM14 homolog B Q9BX40 1-385 peptide-Asp34+Asn-peptide P MS Ile Asp Thr Asp Asn Ser Thr Val Van Damme et al., 2009
protein LTV1 homolog Q6NSQ7 1-470 peptide-Asp120+Val-peptide N MS Phe Glu Glu Asp Val Gly Leu Leu Van Damme et al., 2009 25827
Protein LTV1 homolog Q96GA3 1-475 Peptide-Asp121+Val-Peptide N MS Phe Glu Glu Asp Val Gly Leu Leu Van Damme et al., 2010
Protein LYRIC Q86UE4 1-582 Peptide-Asp101+Asp-Peptide N MS Ala Ala Pro Asp Asp Leu Ala Leu Van Damme et al., 2010
Protein MAK16 homolog Q9BXY0 1-300 Peptide-Asp159+Asn-Peptide N MS Ala Gln Leu Asp Asn Ala Ile Glu Van Damme et al., 2010
Protein Mis18-alpha Q9NYP9 1-233 Peptide-Asp58+Ala-Peptide N MS Met Ser Glu Asp Ala Ser Val Ala Van Damme et al., 2010
Protein Niban Q9BZQ8 1-928 Peptide-Asp761+Asn-Peptide N MS Ile His Pro Asp Asn Cys Glu Glu Van Damme et al., 2010
Protein NRDE2 homolog Q9H7Z3 1-1164 peptide-Asp556+Glu-peptide P MS Ile Asn Pro Asp Glu Asp Asp Asp Van Damme et al., 2009
protein phosphatase 1G Q61074 1-542 peptide-Asp133+Glu-peptide N MS Lys Val Ala Asp Glu Asp Asp Val Van Damme et al., 2009 25881
Protein phosphatase 1G O15355 1-546 Peptide-Asp326+Ser-Peptide N MS Pro Gly Ser Asp Ser Gly Thr Thr Van Damme et al., 2010
Protein phosphatase 1G O15355 1-546 Peptide-Ser349+Arg-Peptide N MS Ala Gly Asp Ser Arg Cys Val Val Van Damme et al., 2010
Protein phosphatase 1G O15355 1-546 Peptide-Asp387+Gly-Peptide N MS Val Thr Met Asp Gly Arg Val Asn Van Damme et al., 2010
Protein phosphatase 1G O15355 1-546 Peptide-Glu147+Glu-Peptide N MS Leu Leu His Glu Glu Ala Thr Met Plasman et al., 2011
Protein phosphatase 1G Q61074 1-542 peptide-Glu147+Glu-peptide P MS Leu Leu His Glu Glu Ala Thr Met Van Damme et al., 2009
Protein PML P29590 1-882 peptide-Glu494+Glu-peptide P MS Met Glu Ser Glu Glu Gly Lys Glu Van Damme et al., 2009
Protein polybromo-1 Q86U86 1-1689 Peptide-Asp1105+Lys-Peptide N MS Ala Asn Ala Asp Lys Gly Asp Asp Van Damme et al., 2010
Protein PRRC2A P48634 1-2157 Peptide-Glu1287+Glu-Peptide N MS Pro Gly Pro Glu Glu Ala Leu Thr Van Damme et al., 2010
Protein PRRC2A P48634 1-2157 Peptide-Asp1658+Ser-Peptide N MS Leu Ser Gly Asp Ser Gln Val Ser Van Damme et al., 2010
Protein PRRC2B Q5JSZ5 1-2229 Peptide-Glu1560+Gly-Peptide N MS Met Val Gly Glu Gly Phe Ile Glu Van Damme et al., 2010
Protein PRRC2B Q7TPM1 1-1486 peptide-Glu877+Gly-peptide P MS Val Val Gly Glu Gly Phe Ile Glu Van Damme et al., 2009
protein Red Q9Z1M8 1-557 peptide-Asp315+Met-peptide N MS Pro Glu Ala Asp Met Asn Ile Phe Van Damme et al., 2009 25882
Protein RRP5 homolog Q14690 2-1871 Peptide-Asp30+Asn-Peptide N MS Val Glu Gln Asp Asn Leu Phe Asp Van Damme et al., 2010
Protein RRP5 homolog Q14690 2-1871 Peptide-Asp1497+Ser-Peptide N MS Glu Glu Asp Asp Ser Leu Val Asp Van Damme et al., 2010
Protein SDA1 homolog Q9NVU7 1-687 peptide-Glu480+Val-peptide P MS Pro Gly Ala Glu Val Leu Glu Val Van Damme et al., 2009
Protein SON P18583 2-2426 Peptide-Asp153+Ser-Peptide N MS Leu Glu Ser Asp Ser Phe Leu Lys Van Damme et al., 2010
Protein SON P18583 2-2426 Peptide-Asp1760+Val-Peptide N MS Leu Ala Ser Asp Val Gly Arg Asp Van Damme et al., 2010
Protein SON P18583 1-2426 peptide-Asp1588+Ala-peptide P MS Ser Glu Ala Asp Ala Gly Glu Thr Van Damme et al., 2009
Protein unc-13 homolog B O14795 1-1591 Peptide-Asp154+Asn-Peptide N MS Leu Gly Ala Asp Asn Glu Tyr Ser Van Damme et al., 2010
Protein virilizer homolog Q69YN4 2-1812 Peptide-Ser608+Met-Peptide N MS Val Glu Ala Ser Met Asp Met Asp Van Damme et al., 2010
Protein virilizer homolog Q69YN4 2-1812 peptide-Asp610+Met-peptide P MS Ala Ser Met Asp Met Asp Leu Leu Van Damme et al., 2009
protein VPRBP Q80TR8 1-1506 peptide-Asp217+Tyr-peptide N MS Val Asp Met Asp Tyr Gly Asp Met Van Damme et al., 2009 25883
Protein VPRBP Q80TR8 1-1506 peptide-Asp224+Val-peptide N MS Met Ala Val Asp Val Val Asp Gly Van Damme et al., 2009 25884
Protein YIPF3 Q9GZM5 1-350 Peptide-Asp65+Ala-Peptide N MS Val Asp Ala Asp Ala Ala Asp Ala Van Damme et al., 2010
protein YIPF4 Q8C407 1-246 peptide-Asp46+Phe-peptide N MS Val Ser Gly Asp Phe Ile Lys Glu Van Damme et al., 2009 25885
protein-arginine deiminase type-4 Q9UM07 1-663 peptide-Asp388+Phe-peptide P NT Met Gly Pro Asp Phe Gly Tyr Val Darrah et al., 2017
Protein-glutamine gamma-glutamyltransferase 2 P21980 2-687 Peptide-Asp326+Lys-Peptide N MS Ile Gln Gly Asp Lys Ser Glu Met Van Damme et al., 2010
Protein-tyrosine kinase 2-beta Q14289 1-1009 Peptide-Asp400+Ile-Peptide N MS Ile Glu Ser Asp Ile Tyr Ala Glu Van Damme et al., 2010
Proteinase-activated receptor 1 P25116 38-60 Peptide-Arg41+Ser-Peptide N MS Leu Asp Pro Arg Ser Phe Leu Leu Parry et al., 1996
prothymosin alpha P26350 2-111 peptide-Asp7+Thr-peptide N MS Ala Ala Val Asp Thr Ser Ser Glu Van Damme et al., 2009 22252
prothymosin alpha P06454 42-425 peptide-Asp76+Gly-peptide P MS Glu Glu Glu Asp Gly Asp Glu Asp Van Damme et al., 2009 22251
Prothymosin alpha P06454 2-111 Peptide-Ser9+Ser-Peptide N MS Val Asp Thr Ser Ser Glu Ile Thr Van Damme et al., 2010
Prothymosin alpha P06454 2-111 peptide-Asp7+Thr-peptide P MS Ala Ala Val Asp Thr Ser Ser Glu Van Damme et al., 2009
Prothymosin alpha P06454 2-111 peptide-Thr13+Thr-peptide P MS Ser Glu Ile Thr Thr Lys Asp Leu Van Damme et al., 2009
Prothymosin alpha P06454 2-111 peptide-Asp16+Leu-peptide P MS Thr Thr Lys Asp Leu Lys Glu Lys Van Damme et al., 2009
Prothymosin alpha P06454 2-111 peptide-Lys18+Glu-peptide P MS Lys Asp Leu Lys Glu Lys Lys Glu Van Damme et al., 2009
Prothymosin alpha P06454 2-111 peptide-Lys20+Lys-peptide P MS Leu Lys Glu Lys Lys Glu Val Val Van Damme et al., 2009
Prothymosin alpha P06454 2-111 peptide-Lys21+Glu-peptide P MS Lys Glu Lys Lys Glu Val Val Glu Van Damme et al., 2009
Prothymosin alpha P06454 2-111 peptide-Glu59+Gly-peptide P MS Glu Glu Glu Glu Gly Gly Glu Glu Van Damme et al., 2009
Prothymosin alpha P06454 2-111 peptide-Glu62+Glu-peptide P MS Glu Gly Gly Glu Glu Glu Glu Glu Van Damme et al., 2009
Prothymosin alpha P06454 2-111 peptide-Glu65+Glu-peptide P MS Glu Glu Glu Glu Glu Glu Glu Glu Van Damme et al., 2009
Prothymosin alpha P06454 2-111 peptide-Glu68+Glu-peptide P MS Glu Glu Glu Glu Glu Gly Asp Gly Van Damme et al., 2009
Prothymosin alpha P06454 2-111 peptide-Asp71+Gly-peptide P MS Glu Glu Gly Asp Gly Glu Glu Glu Van Damme et al., 2009
Prothymosin alpha P06454 2-111 peptide-Gly77+Asp-peptide P MS Glu Glu Asp Gly Asp Glu Asp Glu Van Damme et al., 2009
Prothymosin alpha P26350 2-111 peptide-Asp76+Gly-peptide P MS Glu Glu Glu Asp Gly Asp Glu Asp Van Damme et al., 2009
Proto-oncogene vav P15498 1-845 peptide-Asp171+Glu-peptide P MS Ala Glu Gly Asp Glu Ile Tyr Glu Van Damme et al., 2009
Pumilio homolog 1 Q14671 1-1186 Peptide-Asp291+Val-Peptide N MS Ile Asp Ala Asp Val Lys Asp Phe Van Damme et al., 2010
Putative 40S ribosomal protein S26-like 1 Q5JNZ5 1-115 peptide-Arg42+Asn-peptide P MS Phe Val Ile Arg Asn Ile Val Glu Van Damme et al., 2009
Putative 60S ribosomal protein L13a-like MGC87657 Q6NVV1 1-102 peptide-Ala36+Ala-peptide P MS Val Val Pro Ala Ala Leu Lys Val Van Damme et al., 2009
Putative elongation factor 1-alpha-like 3 Q5VTE0 1-462 peptide-Asp252+Val-peptide P MS Pro Leu Gln Asp Val Tyr Lys Ile Van Damme et al., 2009
Putative elongation factor 1-alpha-like 3 Q5VTE0 1-462 peptide-Asp398+Ala-peptide P MS Lys Ser Gly Asp Ala Ala Ile Val Van Damme et al., 2009
Putative elongation factor 1-alpha-like 3 Q5VTE0 1-462 peptide-Glu413+Ser-peptide P MS Met Cys Val Glu Ser Phe Ser Asp Van Damme et al., 2009
Putative helicase MOV-10 Q9HCE1 1-1003 Peptide-Glu998+Trp-Peptide N MS Val Glu Pro Glu Trp Arg Asn Glu Van Damme et al., 2010
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 O60231 1-1041 peptide-Glu318+Ser-peptide P MS Val Glu Glu Glu Ser Gly Ala Pro Van Damme et al., 2009
Putative RNA-binding protein Luc7-like 1 Q9NQ29 1-371 Peptide-Asp70+Tyr-Peptide N MS Leu Arg Ala Asp Tyr Glu Ile Ala Van Damme et al., 2010
Putative RNA-binding protein Luc7-like 1 Q9NQ29 1-371 peptide-Glu118+Val-peptide P MS Ile Ser Ala Glu Val Ser Ala Lys Van Damme et al., 2009
putative RNA-binding protein Luc7-like 2 Q7TNC4 1-392 peptide-Asp12+Gln-peptide N MS Ala Met Leu Asp Gln Leu Met Gly Van Damme et al., 2009 22227
Putative RNA-binding protein Luc7-like 2 Q9Y383 1-392 Peptide-Met10+Leu-Peptide N MS Met Arg Ala Met Leu Asp Gln Leu Van Damme et al., 2010
Putative RNA-binding protein Luc7-like 2 Q9Y383 1-392 Peptide-Asp79+Phe-Peptide N MS Lys Glu Gln Asp Phe Phe Phe Glu Van Damme et al., 2010
Putative RNA-binding protein Luc7-like 2 Q9Y383 1-392 Peptide-Glu118+Val-Peptide N MS Ile Ser Ala Glu Val Ala Ala Lys Van Damme et al., 2010
Putative RNA-binding protein Luc7-like 2 Q9Y383 1-392 peptide-Asp12+Gln-peptide P MS Ala Met Leu Asp Gln Leu Met Gly Van Damme et al., 2009
putative rRNA methyltransferase 3 Q9DBE9 1-838 peptide-Asp537+Ala-peptide N MS Ile Glu Asp Asp Ala Asp Glu Ala Van Damme et al., 2009 25886
Putative rRNA methyltransferase 3 Q8IY81 1-847 Peptide-Asp276+Asp-Peptide N MS Ile Met Val Asp Asp Glu Glu Leu Van Damme et al., 2010
Putative rRNA methyltransferase 3 Q8IY81 1-847 Peptide-Ala551+Gln-Peptide N MS Ile Ser Gln Ala Gln Leu Leu Phe Van Damme et al., 2010
Putative rRNA methyltransferase 3 Q8IY81 1-847 Peptide-Asp444+Thr-Peptide N MS Ser Ala Ala Asp Thr Phe Leu Ser Van Damme et al., 2010
Putative rRNA methyltransferase 3 Q8IY81 1-847 Peptide-Asp541+Ala-Peptide N MS Ile Glu Asp Asp Ala Asp Glu Ala Van Damme et al., 2010
Putative tropomyosin alpha-3 chain-like protein A6NL28 1-223 Peptide-Asp114+Leu-Peptide N MS Ile Glu Gly Asp Leu Glu Cys Thr Van Damme et al., 2010
putative uncharacterized protein Q8BHG7 1-327 peptide-Asp198+Ala-peptide N MS Val Ala Ser Asp Ala Met Ser Ile Van Damme et al., 2009 25738
Pyruvate kinase isozymes M1/M2 P14618 2-531 Peptide-Asp236+Val-Peptide N MS Val Glu Gln Asp Val Asp Met Val Van Damme et al., 2010
R3H and coiled-coil domain-containing protein 1 Q9Y3T6 1-480 peptide-Glu259+Ser-peptide P MS Leu Gly Pro Glu Ser Gln Ser Gly Van Damme et al., 2009
R3H domain-containing protein 1 Q15032 1-1099 Peptide-Asp301+Ser-Peptide N MS Phe Ser Gln Asp Ser Leu Cys Ser Van Damme et al., 2010
Rab-interacting lysosomal protein Q96NA2 1-401 Peptide-Asp75+Ser-Peptide N MS Pro Ala Pro Asp Ser Leu Gln Val Van Damme et al., 2010
Rab11 family-interacting protein 1 Q6WKZ4 1-1283 Peptide-Asp475+Ala-Peptide N MS Pro Gly Glu Asp Ala Ser Gly Pro Van Damme et al., 2010
RAD51-associated protein 1 Q96B01 1-352 Peptide-Gln180+Arg-Peptide N MS Ala Ala Gln Gln Arg Lys Ile Leu Van Damme et al., 2010
RalBP1-associated Eps domain-containing protein 1 Q96D71 1-796 peptide-Asp447+Thr-peptide P MS Ala Asp Pro Asp Thr Ala Ile Val Van Damme et al., 2009
Ran GTPase-activating protein 1 P46060 2-587 Peptide-Glu64+Ala-Peptide N MS Val Gly Val Glu Ala Ala Arg Val Van Damme et al., 2010
Ran GTPase-activating protein 1 P46060 2-587 Peptide-Asp319+Lys-Peptide N MS Ala Met Ala Asp Lys Ala Glu Leu Van Damme et al., 2010
Ran-binding protein 3 Q9H6Z4 2-567 Peptide-Asp343+Ala-Peptide N MS Val Ser Ser Asp Ala Asn Arg Glu Van Damme et al., 2010
Ran-binding protein 9 Q96S59 1-729 Peptide-Asp566+His-Peptide N MS Met Glu Thr Asp His Tyr Ser Asn Van Damme et al., 2010
RanBP2-like and GRIP domain-containing protein 3 A6NKT7 1-1758 Peptide-Asp698+Ala-Peptide N MS Ile Ala Asn Asp Ala Leu Ser Pro Van Damme et al., 2010
Rap guanine nucleotide exchange factor 6 Q8TEU7 1-1601 Peptide-Asp1282+Ser-Peptide N MS Cys Ser Val Asp Ser Met Ser Ala Van Damme et al., 2010
Rap guanine nucleotide exchange factor 6 Q8TEU7 1-1601 peptide-Asp1123+Glu-peptide P MS Val Glu Thr Asp Glu Glu Lys Phe Van Damme et al., 2009
RB1-inducible coiled-coil protein 1 Q8TDY2 1-1594 Peptide-Asp268+Thr-Peptide N MS Val Ser Pro Asp Thr Ala Asp Ala Van Damme et al., 2010
Regulation of nuclear pre-mRNA domain-containing protein 1B Q9NQG5 1-326 Peptide-Leu125+Lys-Peptide N MS Ile Gln Gln Leu Lys Leu Ser Met Van Damme et al., 2010
Regulator of chromosome condensation P18754 2-421 Peptide-Asp44+Val-Peptide N MS Gly Gln Gly Asp Val Gly Gln Leu Van Damme et al., 2010
Regulator of chromosome condensation P18754 2-421 Peptide-Asp310+Ser-Peptide N MS Val Cys Met Asp Ser Glu Gly Lys Van Damme et al., 2010
Regulator of chromosome condensation P18754 2-421 Peptide-Glu73+Ala-Peptide N MS Val Gln Ala Glu Ala Gly Gly Met Van Damme et al., 2010
Regulator of nonsense transcripts 1 Q92900 1-1129 Peptide-Asp1054+Val-Peptide N MS Ala Ser Gln Asp Val Ala Ser Gln Van Damme et al., 2010
Regulator of nonsense transcripts 3B Q9BZI7 1-483 Peptide-Asp32+Ser-Peptide N MS Thr Ser Gly Asp Ser Ser Lys Gly Van Damme et al., 2010
Regulator of nonsense transcripts 3B Q9BZI7 1-483 peptide-Asp170+Asn-peptide P MS Tyr Ala Thr Asp Asn Glu Lys Met Van Damme et al., 2009
Regulatory factor X-associated protein Q8VCG9 1-231 peptide-Glu80+Glu-peptide P MS Ala Ser Pro Glu Glu Leu Glu Asp Van Damme et al., 2009
RemovedProtein phosphatase 1 regulatory subunit 7 Q15435 2-360 Peptide-Asp42+Leu-Peptide N MS Ile Val Ala Asp Leu Ser Glu Gln Van Damme et al., 2010
Replication factor C subunit 1 P35251 1-1148 Peptide-Glu1133+Lys-Peptide N MS Ser Lys Pro Glu Lys Asp Lys Glu Van Damme et al., 2010
Replication factor C subunit 5 P40937 1-340 Peptide-Asp200+Gly-Peptide N MS Ile Ser Glu Asp Gly Met Lys Ala Van Damme et al., 2010
REST corepressor 1 Q9UKL0 1-482 Peptide-Asp114+Phe-Peptide N MS Val Val Pro Asp Phe Asp Pro Ala Van Damme et al., 2010
REST corepressor 1 Q9UKL0 1-482 Peptide-Asn327+Ala-Peptide N MS Val Ser Ala Asn Ala Thr Ala Ala Van Damme et al., 2010
Reticulon-4 Q9NQC3 1-1192 peptide-Asp80+Phe-peptide P MS Pro Leu Met Asp Phe Gly Asn Asp Van Damme et al., 2009
Retinoblastoma-associated protein P06400 2-928 Peptide-Asp36+Ser-Peptide N MS Pro Glu Gln Asp Ser Gly Pro Glu Plasman et al., 2011
Retinoblastoma-binding protein 5 Q15291 1-538 Peptide-Asp335+Phe-Peptide N MS Phe Ala Pro Asp Phe Lys Glu Leu Van Damme et al., 2010
Rho GTPase-activating protein 15 Q53QZ3 1-475 peptide-Asp48+Val-peptide P MS Ile Leu Thr Asp Val Gly Lys Val Van Damme et al., 2009
Rho GTPase-activating protein 19 Q14CB8 1-494 peptide-Asp30+Ser-peptide P MS Ile Cys Asn Asp Ser Ser Leu Arg Van Damme et al., 2009
Rho GTPase-activating protein 30 Q7Z6I6 1-1101 peptide-Asp859+Thr-peptide P MS Leu Glu Glu Asp Thr Leu Ser Glu Van Damme et al., 2009
Rho GTPase-activating protein 35 Q9NRY4 1-1513 Peptide-Phe445+Ile-Peptide N MS Thr Ser Pro Phe Ile Thr Pro Gly Van Damme et al., 2010
Rho GTPase-activating protein 6 O43182 1-974 Peptide-Asp365+Ser-Peptide N MS Met Ser Val Asp Ser Ile Thr Asp Van Damme et al., 2010
rho guanine nucleotide exchange factor 1 Q61210 1-920 peptide-Asp290+Ala-peptide N MS Val Glu Ala Asp Ala Glu Lys Pro Van Damme et al., 2009 25889
Rho guanine nucleotide exchange factor 2 Q92974 1-986 Peptide-Asp690+Ser-Peptide N MS Leu Glu Pro Asp Ser Gly Gly Asn Van Damme et al., 2010
Rho guanine nucleotide exchange factor 6 Q15052 1-776 peptide-Asp656+Ala-peptide P MS Leu Glu Glu Asp Ala Gln Ile Leu Van Damme et al., 2009
Rho guanine nucleotide exchange factor 7 Q14155 1-803 Peptide-Asp710+Ala-Peptide N MS Leu Glu Glu Asp Ala Gln Ile Leu Van Damme et al., 2010
Rho-associated protein kinase 2 O75116 2-1388 peptide-Asp1131+Ser-peptide P Ile Gly Leu Asp Ser Ser Ser Ile Sebbagh et al., 2005 19517
Ribonuclease H2 subunit A O75792 1-299 Peptide-Asp256+Ser-Peptide N MS Ile Trp Glu Asp Ser Ala Ser Glu Van Damme et al., 2010
Ribonuclease inhibitor P13489 2-461 Peptide-Asp127+Ala-Peptide N MS Leu Leu Gly Asp Ala Gly Leu Gln Van Damme et al., 2010
Ribonucleoprotein PTB-binding 1 Q9CW46 2-748 peptide-Glu16+Ala-peptide P MS Leu Ser Pro Glu Ala Glu Ala Glu Van Damme et al., 2009
Ribosomal L1 domain-containing protein 1 O76021 1-490 Met-Glu-Asp3+Ser-Peptide N MS - Met Glu Asp Ser Ala Ser Ala Van Damme et al., 2010
Ribosomal L1 domain-containing protein 1 O76021 1-490 Peptide-Glu437+Ala-Peptide N MS Ile Lys Glu Glu Ala Val Lys Glu Van Damme et al., 2010
Ribosomal L1 domain-containing protein 1 O76021 1-490 Peptide-Asp319+Asp-Peptide N MS Leu Ser Lys Asp Asp Val Ala Pro Van Damme et al., 2010
Ribosomal L1 domain-containing protein 1 O76021 1-490 peptide-Glu324+Ser-peptide P MS Val Ala Pro Glu Ser Gly Asp Thr Van Damme et al., 2009
Ribosomal RNA processing protein 1 homolog A P56182 1-461 Peptide-Asp299+Tyr-Peptide N MS Leu Gln Phe Asp Tyr Glu Ala Val Van Damme et al., 2010
Ribosomal RNA processing protein 1 homolog B Q14684 1-758 peptide-Glu457+Ser-peptide P MS Thr Gly Glu Glu Ser Gly Ser Glu Van Damme et al., 2009
Ribosome biogenesis protein BMS1 homolog Q14692 1-1282 Peptide-Asp475+Gln-Peptide N MS Glu Met Thr Asp Gln Tyr Met Ala Van Damme et al., 2010
ribosome biogenesis regulatory protein homolog Q9CYH6 1-365 peptide-Asp260+Phe-peptide N MS Leu Phe Gly Asp Phe Ala Ala Glu Van Damme et al., 2009 25891
Ribosome biogenesis regulatory protein homolog Q15050 1-365 Peptide-Asp260+Phe-Peptide N MS Leu Phe Gly Asp Phe Ala Ala Glu Van Damme et al., 2010
Ribosome production factor 2 homolog Q9H7B2 1-306 Peptide-Lys285+Lys-Peptide N MS Lys Gly Leu Lys Lys Arg Pro Ala Van Damme et al., 2010
RING finger protein 113A O15541 2-343 peptide-Asp254+Asp-peptide P MS Val Gly Ser Asp Asp Glu Glu Ile Van Damme et al., 2009
RING finger protein 114 Q9Y508 1-228 Peptide-Asp210+Val-Peptide N MS Val Asp Tyr Asp Val Asp Glu Glu Van Damme et al., 2010
RING finger protein 214 Q8ND24 2-703 Peptide-Asp219+Gln-Peptide N MS Val Asn Thr Asp Gln Asp Ile Glu Van Damme et al., 2010
Rltpr protein Q14BI8 1-205 peptide-Asp100+Ile-peptide N MS Pro Ala Pro Asp Ile Leu Ser Leu Van Damme et al., 2009 25764
RNA 3'-terminal phosphate cyclase O00442 1-366 Peptide-Asp9+Gly-Peptide N MS Val Glu Val Asp Gly Ser Ile Met Van Damme et al., 2010 22266
RNA exonuclease 1 homolog Q8N1G1 1-1221 Peptide-Asp141+Glu-Peptide N MS Val Gly Pro Asp Glu Asp Ala Phe Van Damme et al., 2010
RNA exonuclease 4 Q9GZR2 1-422 Peptide-Glu117+Glu-Peptide N MS Val Lys Gly Glu Glu Met Pro Ala Van Damme et al., 2010
RNA exonuclease 4 Q9GZR2 1-422 Peptide-Asp193+Ile-Peptide N MS Thr Glu Glu Asp Ile Trp Phe Asp Van Damme et al., 2010
RNA polymerase-associated protein CTR9 homolog Q6PD62 1-1173 Peptide-Glu894+Thr-Peptide N MS Phe Thr Gly Glu Thr Glu Ala Thr Van Damme et al., 2010
RNA polymerase-associated protein LEO1 Q8WVC0 1-666 Peptide-Asp573+Arg-Peptide N MS Leu Glu Pro Asp Arg Tyr Asp Glu Van Damme et al., 2010
RNA pseudouridylate synthase domain-containing protein 2 Q8IZ73 1-545 Peptide-Asp62+Ala-Peptide N MS Ala Gly Gly Asp Ala Lys Val Glu Van Damme et al., 2010
RNA-binding protein 10 Q3TIY0 1-930 peptide-Asp691+Ala-peptide N MS Ala Thr Ala Asp Ala Gly Tyr Ala Van Damme et al., 2009 25709
RNA-binding protein 10 P98175 1-930 peptide-Tyr276+Gln-peptide P MS Pro Gln Pro Tyr Gln Ala Gln Gly Van Damme et al., 2009
RNA-binding protein 10 Q99KG3 1-930 peptide-Asp691+Ala-peptide P MS Ala Thr Ala Asp Ala Gly Tyr Ala Van Damme et al., 2009
RNA-binding protein 26 Q5T8P6 1-1007 peptide-Asp902+Arg-peptide P MS Thr Glu Ser Asp Arg Glu Asp Leu Van Damme et al., 2009
RNA-binding protein 28 Q9NW13 1-759 peptide-Asp314+Lys-peptide P MS Glu Gln Glu Asp Lys Ala Val Gln Van Damme et al., 2009
RNA-binding protein 28 Q9NW13 2-759 peptide-Asp462+Met-peptide P MS Ser Ala Ala Asp Met Ala Lys Arg Van Damme et al., 2009
RNA-binding protein 34 Q8C5L7 1-375 peptide-Asp30+Tyr-peptide N MS Ala Ala Ser Asp Tyr Leu Val Gly Van Damme et al., 2009 25894
RNA-binding protein 34 P42696 1-430 peptide-Glu177+Glu-peptide P MS Ile Asn Gln Glu Glu Glu Arg Leu Van Damme et al., 2009
RNA-binding protein 39 Q14498 2-530 Peptide-Asp340+Ser-Peptide N MS Ser Phe Leu Asp Ser Asp Glu Leu Van Damme et al., 2010
RNA-binding protein 4 Q9BWF3 1-364 peptide-Asp108+Ile-peptide P MS Ile Glu Cys Asp Ile Val Lys Asp Van Damme et al., 2009
RNA-binding protein 40 Q96LT9 1-517 Peptide-Asp380+Ser-Peptide N MS Ile Lys Glu Asp Ser Asp Glu Met Van Damme et al., 2010
RNA-binding protein 4B Q9BQ04 1-359 peptide-Asp108+Ile-peptide P MS Ile Glu Cys Asp Ile Val Lys Asp Van Damme et al., 2009
RNA-binding protein 5 Q91YE7 1-815 peptide-Asp623+Ser-peptide N MS Tyr Ser Gly Asp Ser Asp Asn Glu Van Damme et al., 2009 25895
RNA-binding protein 8A Q9CWZ3 1-174 peptide-Asp53+Tyr-peptide N MS Met Arg Glu Asp Tyr Asp Ser Val Van Damme et al., 2009 22253
RNA-binding protein 8A Q9Y5S9 2-174 peptide-Asp53+Tyr-peptide P MS Met Arg Glu Asp Tyr Asp Ser Val Van Damme et al., 2009
RNA-binding protein EWS Q01844 1-656 peptide-Asp345+Leu-peptide P MS Glu Gly Pro Asp Leu Asp Leu Gly Van Damme et al., 2009
RNA-binding protein PNO1 Q9CPS7 1-248 peptide-Asp62+Gln-peptide N MS Leu Ser Gly Asp Gln Leu Leu Thr Van Damme et al., 2009 25897
RNA-binding protein PNO1 Q9NRX1 1-252 Peptide-Asp66+Gly-Peptide N MS Leu Cys Gly Asp Gly Leu Leu Ser Van Damme et al., 2010
RNA-binding protein Raly Q64012 1-312 peptide-Asp267+Thr-peptide N MS Pro Gln Glu Asp Thr Ala Ser Glu Van Damme et al., 2009 25898
ROD1 regulator of differentiation 1 F7C521 1-87 peptide-Asp9+Leu-peptide N MS Val Val Thr Asp Leu Ile Ala Val Van Damme et al., 2009 25900
Roquin Q5TC82 1-1133 Peptide-Asp479+Glu-Peptide N MS Ile Leu Pro Asp Glu Gly Ala Val Van Damme et al., 2010
rRNA 2-O-methyltransferase fibrillarin P22087 1-321 peptide-Asp184+Gly-peptide P Val Gly Pro Asp Gly Leu Val Tyr Casciola-Rosen et al., 1999 27176
rRNA 2-O-methyltransferase fibrillarin P22087 1-321 peptide-Asp104+Ala-peptide P MS Gly Lys Glu Asp Ala Leu Val Thr Van Damme et al., 2009 22187
RRP12-like protein Q6P5B0 1-1295 peptide-Asp1072+Ser-peptide N MS Ser Lys Gly Asp Ser Ile Glu Glu Van Damme et al., 2009 25901
RRP12-like protein Q5JTH9 1-1297 Peptide-Met1182+Glu-Peptide N MS Ala Asp Pro Met Glu Asp Val Ile Van Damme et al., 2010
RRP12-like protein Q5JTH9 1-1297 Peptide-Glu82+Ala-Peptide N MS Met Glu Glu Glu Ala Glu Leu Val Van Damme et al., 2010
RRP12-like protein Q5JTH9 1-1297 Peptide-Asp1071+Ser-Peptide N MS Gly Lys Gly Asp Ser Ile Glu Glu Van Damme et al., 2010
RRP15-like protein Q9CYX7 1-281 peptide-Asp151+Val-peptide N MS Val Lys Pro Asp Val Val Lys Asp Van Damme et al., 2009 22260
RRP15-like protein Q9Y3B9 2-282 peptide-Asp151+Val-peptide P MS Val Lys Pro Asp Val Val Gln Asp Van Damme et al., 2009 22259
RRP15-like protein Q9Y3B9 2-282 Peptide-Asp261+Trp-Peptide N MS Ser Met Lys Asp Trp Asp Lys Glu Van Damme et al., 2010
SAM and SH3 domain-containing protein 3 O75995 1-380 peptide-Asp102+Thr-peptide P MS Glu Met Ala Asp Thr Leu Glu Glu Van Damme et al., 2009
SAP30-binding protein Q9UHR5 1-308 Peptide-Asp209+Lys-Peptide N MS Ile Glu Met Asp Lys Leu Glu Lys Van Damme et al., 2010
Sarcoplasmic reticulum histidine-rich calcium-binding protein P23327 29-699 Peptide-Asp565+His-Peptide N MS Leu Ser Pro Asp His Ser Glu Glu Van Damme et al., 2010
Scaffold attachment factor B2 Q14151 2-953 Peptide-Asp286+Ser-Peptide N MS Ser Lys Ala Asp Ser Leu Leu Ala Van Damme et al., 2010
Secretogranin-1 P05060 21-677 Peptide-Arg591+Val-Peptide N MS Asn Leu Ala Arg Val Pro Lys Leu Van Damme et al., 2010
Segment polarity protein dishevelled homolog DVL-2 O14641 1-736 peptide-Asp422+Met-peptide P MS Val His Thr Asp Met Ala Ser Val Van Damme et al., 2009
Selenide, water dikinase 2 Q99611 2-448 Peptide-Asp438+Ser-Peptide N MS Leu Ala Pro Asp Ser Ser Asn Ala Van Damme et al., 2010
Sentrin-specific protease 2 Q9HC62 1-589 Peptide-Asp320+Leu-Peptide N MS Leu Glu Pro Asp Leu Ser Glu Glu Van Damme et al., 2010
Septin-1 Q8WYJ6 1-367 peptide-Asp205+Ser-peptide P MS Pro Glu Cys Asp Ser Asp Glu Asp Van Damme et al., 2009
Septin-9 Q9UHD8 1-586 peptide-Asp282+Ser-peptide P MS Val Gly Ile Asp Ser Ile Leu Glu Van Damme et al., 2009
Serglycin P10124 28-158 peptide-Leu59+Leu-peptide P MS Met Phe Glu Leu Leu Pro Gly Glu Van Damme et al., 2009
serine/arginine repetitive matrix protein 1 Q8IYB3 1-904 peptide-Asp468+Lys-peptide P MS Ser Glu Glu Asp Lys Gly Gly Lys Van Damme et al., 2009 22272
Serine/arginine repetitive matrix protein 1 Q52KI8 1-946 peptide-Glu914+Ser-peptide P MS Lys Glu Thr Glu Ser Glu Ala Glu Van Damme et al., 2009
Serine/arginine repetitive matrix protein 1 Q52KI8 1-946 peptide-Glu916+Ala-peptide P MS Thr Glu Ser Glu Ala Glu Asp Asp Van Damme et al., 2009
serine/arginine repetitive matrix protein 2 Q8BTI8 1-2703 peptide-Asp143+Ser-peptide N MS Gly Ile Ser Asp Ser Tyr Val Asp Van Damme et al., 2009 22273
Serine/arginine repetitive matrix protein 2 Q8BTI8 1-2703 peptide-Asp836+Glu-peptide N MS Met Gln Ala Asp Glu Cys Thr Ala Van Damme et al., 2009 25903
Serine/arginine repetitive matrix protein 2 Q9UQ35 1-2752 Peptide-Asp1141+Ser-Peptide N MS Phe Gln Ser Asp Ser Ser Ser Tyr Van Damme et al., 2010
Serine/arginine repetitive matrix protein 2 Q9UQ35 1-2752 Peptide-Asp1389+Ala-Peptide N MS Leu Ser Pro Asp Ala Val Glu Lys Van Damme et al., 2010
Serine/arginine repetitive matrix protein 2 Q9UQ35 1-2752 Peptide-Ser149+Ser-Peptide N MS Val Asp Gly Ser Ser Phe Asp Pro Van Damme et al., 2010
Serine/arginine repetitive matrix protein 2 Q9UQ35 1-2752 peptide-Glu79+Gln-peptide P MS Met Met Glu Glu Gln Gly Tyr Glu Van Damme et al., 2009
Serine/arginine repetitive matrix protein 2 Q9UQ35 1-2752 peptide-Asp143+Ser-peptide P MS Gly Ile Ser Asp Ser Tyr Val Asp Van Damme et al., 2009
Serine/Arginine-related protein 53 Q96IZ7 1-334 Peptide-Asp238+Ser-Peptide N MS Ile Glu Ser Asp Ser Phe Val Gln Van Damme et al., 2010
Serine/arginine-rich splicing factor 11 Q05519 1-484 Peptide-Asp240+Lys-Peptide N MS Ile Glu Pro Asp Lys Lys Glu Glu Van Damme et al., 2010
Serine/arginine-rich splicing factor 11 Q05519 1-484 peptide-Asp473+Asp-peptide P MS Val Asn Gly Asp Asp His His Glu Van Damme et al., 2009
Serine/arginine-rich splicing factor 6 Q13247 1-344 Peptide-Asp254+Arg-Peptide N MS Pro Lys Ser Asp Arg Gly Ser His Van Damme et al., 2010
Serine/threonine-protein kinase 25 O00506 1-426 Peptide-Asp158+Phe-Peptide N MS Lys Leu Ala Asp Phe Gly Val Ala Van Damme et al., 2010
Serine/threonine-protein kinase 25 O00506 1-426 peptide-Glu17+Glu-peptide P MS Val Asp Pro Glu Glu Leu Phe Thr Van Damme et al., 2009
serine/threonine-protein kinase 3 Q9JI10 1-497 peptide-Asp361+Leu-peptide N MS Leu Glu Ser Asp Leu Gly Thr Met Van Damme et al., 2009 25904
Serine/threonine-protein kinase MAK P20794 1-623 peptide-Leu29+Val-peptide P MS Ser Gly Glu Leu Val Ala Ile Lys Van Damme et al., 2009
serine/threonine-protein kinase N1 P70268 1-946 peptide-Asp203+Glu-peptide N MS Ala Ala Pro Asp Glu Ala Gln Gly Van Damme et al., 2009 22246
serine/threonine-protein kinase N1 Q16512 1-942 peptide-Asp200+Asp-peptide P MS Ala Ala Pro Asp Asp Thr Gln Gly Van Damme et al., 2009 22245
Serine/threonine-protein kinase N2 Q16513 2-984 Peptide-Asp602+Ser-Peptide N MS Pro Gly Gln Asp Ser Glu Thr Val Van Damme et al., 2010
Serine/threonine-protein kinase Nek4 P51957 1-841 Peptide-Glu508+Cys-Peptide N MS Val Ala Gly Glu Cys Ile Ile Glu Van Damme et al., 2010
Serine/threonine-protein kinase Nek9 Q8TD19 1-979 Peptide-Asp17+Phe-Peptide N MS Ile Asn Ser Asp Phe Gly Ser Glu Van Damme et al., 2010
Serine/threonine-protein kinase OSR1 O95747 1-527 peptide-Lys42+Val-peptide P MS Lys Lys Glu Lys Val Ala Ile Lys Van Damme et al., 2009
Serine/threonine-protein kinase PRP4 homolog Q13523 2-1007 Peptide-Asp526+Phe-Peptide N MS Asn Leu Glu Asp Phe Asp Val Glu Van Damme et al., 2010
Serine/threonine-protein kinase PRP4 homolog Q13523 2-1007 Peptide-Asp121+Asn-Peptide N MS Ala Glu Leu Asp Asn Glu Leu Met Van Damme et al., 2010
Serine/threonine-protein kinase PRP4 homolog Q13523 1-1007 peptide-Glu27+Asn-peptide P MS Ile Asn Glu Glu Asn Gly Glu Val Van Damme et al., 2009
Serine/threonine-protein kinase RIO1 Q9BRS2 1-568 Peptide-Asp123+Lys-Peptide N MS Ile Asn Leu Asp Lys Leu Asn Val Van Damme et al., 2010
Serine/threonine-protein kinase RIO2 Q9BVS4 1-552 Peptide-Asn411+Ser-Peptide N MS Val Glu Asn Asn Ser Val Thr Glu Van Damme et al., 2010
Serine/threonine-protein kinase RIO2 Q9BVS4 1-552 Peptide-Asp379+Ser-Peptide N MS Ile Lys Glu Asp Ser Leu Ser Glu Van Damme et al., 2010
Serine/threonine-protein kinase SRPK1 Q96SB4-2 1-655 Peptide-Asp339+Gln-Peptide N MS Ile Gly Gln Asp Gln Thr Leu Met Van Damme et al., 2010
Serine/threonine-protein kinase TNNI3K Q59H18 1-835 peptide-Ile486+Val-peptide P MS Arg Asn Lys Ile Val Ala Ile Lys Van Damme et al., 2009
serine/threonine-protein kinase WNK1 P83741 1-2377 peptide-Asp2057+Asn-peptide N MS Met Ser Ser Asp Asn Glu Ser Asp Van Damme et al., 2009 25905
Serine/threonine-protein kinase WNK4 Q96J92 1-1243 Peptide-Asp645+Ala-Peptide N MS Tyr Ala Ser Asp Ala Ala Ser Gly Van Damme et al., 2010
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform P63151 1-447 peptide-Asp411+Ser-peptide P MS Ile Ser Val Asp Ser Leu Asp Phe Van Damme et al., 2009
Serine/threonine-protein phosphatase 4 regulatory subunit 1 Q8TF05 1-950 Peptide-Asp42+Glu-Peptide N MS Val Ser Gln Asp Glu Met Leu Thr Van Damme et al., 2010
Serine/threonine-protein phosphatase 6 regulatory subunit 2 O75170 1-966 peptide-Asp610+Glu-peptide P MS Ile Asp Ala Asp Glu Asp Ser Pro Van Damme et al., 2009
serpin B9 P50453 1-376 peptide-Glu340+Cys-peptide P Val Val Ala Glu Cys Cys Met Glu Mahrus et al., 2004
Serum deprivation-response protein O95810 2-425 Peptide-Glu350+Ile-Peptide N MS Val Glu Gly Glu Ile Ala Glu Glu Van Damme et al., 2010
Serum deprivation-response protein O95810 2-425 peptide-Asp379+Glu-peptide P MS Ile Val Glu Asp Glu Glu Glu Glu Van Damme et al., 2009
Seryl-tRNA synthetase, cytoplasmic P49591 2-514 Peptide-Asp93+Ala-Peptide N MS Leu Thr Ala Asp Ala Leu Ala Asn Van Damme et al., 2010
Seryl-tRNA synthetase, cytoplasmic P49591 2-514 Peptide-Asp148+Glu-Peptide N MS Ile Ser Asn Asp Glu Asp Val Asp Van Damme et al., 2010
Sex comb on midleg-like protein 2 Q9UQR0 1-700 Peptide-Asp8+Ser-Peptide N MS Val Asn Glu Asp Ser Met Asp Val Van Damme et al., 2010
SGT1 protein homolog Q9CS74 1-641 peptide-Asp421+Gln-peptide N MS Leu Ser Pro Asp Gln Leu Asp Gln Van Damme et al., 2009 25906
SHC SH2 domain-binding protein 1 Q8NEM2 1-672 Peptide-Asn611+Cys-Peptide N MS Val Glu Gly Asn Cys Glu Ile Val Van Damme et al., 2010
Signal recognition particle 68 kDa protein Q9UHB9 1-627 Peptide-Asp499+Ala-Peptide N MS Val Asn Ser Asp Ala Gly Ala Phe Van Damme et al., 2010
signal recognition particle 72 kDa protein O76094 2-671 peptide-Asp573+Pro-peptide P Val Thr Pro Asp Pro Glu Arg Trp Casciola-Rosen et al., 1999
Signal recognition particle 72 kDa protein O76094 2-671 Peptide-Glu519+Ala-Peptide N MS Val Asp Val Glu Ala Leu Glu Asn Van Damme et al., 2010
Signal recognition particle 72 kDa protein O76094 2-671 Peptide-Asp540+Ser-Peptide N MS Val Thr Gly Asp Ser Gln Pro Lys Van Damme et al., 2010
signal-induced proliferation-associated protein 1 P46062 1-1037 peptide-Asp852+Leu-peptide N MS Thr Thr Pro Asp Leu Leu Leu Val Van Damme et al., 2009 25907
Sin3 histone deacetylase corepressor complex component SDS3 Q9H7L9 1-328 Peptide-Asp173+Ser-Peptide N MS Leu Thr Gly Asp Ser Met Glu Val Van Damme et al., 2010
Sister chromatid cohesion protein PDS5 homolog A Q29RF7 1-1337 Peptide-Asp1224+Gln-Peptide N MS Ile Asn Ser Asp Gln Ala Thr Gln Van Damme et al., 2010
Sjoegren syndrome/scleroderma autoantigen 1 O60232 2-199 Peptide-Asp55+Cys-Peptide N MS Thr Cys Ala Asp Cys Gly Thr Ile Van Damme et al., 2010
Sjoegren syndrome/scleroderma autoantigen 1 O60232 1-199 peptide-Asp77+Ser-peptide P MS Gln Glu Leu Asp Ser Asp Val Asp Van Damme et al., 2009
Sjoegren syndrome/scleroderma autoantigen 1 O60232 1-199 peptide-Asp79+Val-peptide P MS Leu Asp Ser Asp Val Asp Lys Asp Van Damme et al., 2009
Small nuclear ribonucleoprotein Sm D1 P62314 1-119 Peptide-Asp72+Ser-Peptide N MS Ile Leu Pro Asp Ser Leu Pro Leu Van Damme et al., 2010
Small subunit processome component 20 homolog O75691 1-2785 peptide-Asp1540+Tyr-peptide P MS Ile Gln Gln Asp Tyr Thr Thr Ile Van Damme et al., 2009
snRNA-activating protein complex subunit 4 Q5SXM2 1-1469 peptide-Asp568+Met-peptide P MS Met Val Pro Asp Met Asp Leu Trp Van Damme et al., 2009
SNW domain-containing protein 1 Q9CSN1 1-536 peptide-Asp457+Met-peptide N MS Leu Asp Lys Asp Met Tyr Gly Asp Van Damme et al., 2009 25908
SNW domain-containing protein 1 Q13573 2-536 Peptide-Asp16+Gln-Peptide N MS Leu Ser Gln Asp Gln Leu Glu Ala Van Damme et al., 2010
SNW domain-containing protein 1 Q13573 2-536 Peptide-Asp91+Ser-Peptide N MS Ile Gln Val Asp Ser Glu Gly Lys Van Damme et al., 2010
Sodium channel protein type 4 subunit alpha P35499 1-1836 Peptide-Asp289+Thr-Peptide P CS Pro Phe Asn Asp Thr Asn Thr Thr Gahring et al., 2001
Sodium channel protein type 4 subunit alpha P35499 1-1836 Peptide-Asp334+Thr-Peptide P CS Ala Thr Asn Asp Thr Phe Asp Trp Gahring et al., 2001
Something about silencing protein 10 Q9NQZ2 1-479 peptide-Asp140+Tyr-peptide P MS Tyr Asp Thr Asp Tyr Gly Ser Lys Van Damme et al., 2009
sororin Q9CPY3 1-264 peptide-Asp125+Ser-peptide N MS Val Glu Pro Asp Ser Gly Glu Ala Van Damme et al., 2009 25909
Sorting nexin-8 Q9Y5X2 1-465 peptide-Gln42+Ala-peptide P MS Ile Glu Pro Gln Ala Ile Val Gln Van Damme et al., 2009
Spartin Q8N0X7 1-666 Peptide-Asp190+Ser-Peptide N MS Tyr Gly Thr Asp Ser Gly Glu Phe Van Damme et al., 2010
Spartin Q8N0X7 1-666 peptide-Asp359+Gln-peptide P MS Pro Ser Ser Asp Gln Leu Lys Glu Van Damme et al., 2009
Spermatid perinuclear RNA-binding protein Q96SI9 1-672 Peptide-Asn482+Ser-Peptide N MS Val Ser Ser Asn Ser Ser Asn Asn Van Damme et al., 2010
Spermatogenesis-associated protein 5-like protein 1 Q9BVQ7 1-753 Peptide-Asp674+Val-Peptide N MS Ile Gly Pro Asp Val Ser Leu Glu Van Damme et al., 2010
splicing factor 3B subunit 1 Q99NB9 1-1304 peptide-Asp34+Ser-peptide N MS Val Gly Leu Asp Ser Thr Gly Tyr Van Damme et al., 2009 22268
splicing factor 3B subunit 1 O75533 1-1304 peptide-Asp483+Glu-peptide P MS Val Asp Val Asp Glu Ser Thr Leu Van Damme et al., 2009 22269
Splicing factor 3B subunit 1 O75533 1-1304 peptide-Asp34+Ser-peptide P MS Val Gly Leu Asp Ser Thr Gly Tyr Van Damme et al., 2009
Splicing factor 3B subunit 1 O75533 1-1304 peptide-Asp321+Ser-peptide P MS Arg Gly Gly Asp Ser Ile Gly Glu Van Damme et al., 2009
Splicing factor 3B subunit 1 Q99NB9 1-1304 peptide-Asp483+Glu-peptide P MS Val Asp Val Asp Glu Ser Thr Leu Van Damme et al., 2009
Splicing factor 3B subunit 2 Q13435 1-895 Peptide-Asp589+Leu-Peptide N MS Ile His Gly Asp Leu Tyr Tyr Glu Van Damme et al., 2010
Splicing factor 3B subunit 2 Q13435 1-895 Peptide-Asp742+Ser-Peptide N MS Thr Pro Ala Asp Ser Gly Leu Ile Van Damme et al., 2010
Splicing factor 3B subunit 2 Q13435 1-895 Peptide-Glu831+Glu-Peptide N MS Leu Ala Pro Glu Glu Leu Glu Leu Van Damme et al., 2010
Splicing factor 3B subunit 2 Q13435 1-895 Peptide-Glu858+Asp-Peptide N MS Val Glu Lys Glu Asp Phe Ser Asp Van Damme et al., 2010
Splicing factor 3b, subunit 2 Q80W39 1-878 peptide-Asp725+Ser-peptide N MS Thr Pro Ala Asp Ser Gly Leu Ile Van Damme et al., 2009 25753
Splicing factor 45 Q96I25 1-401 Peptide-Asp281+Ala-Peptide N MS Ile Val Gly Asp Ala Thr Glu Lys Van Damme et al., 2010
Splicing factor 45 Q96I25 1-401 Peptide-Asp321+Leu-Peptide N MS Val Asp Glu Asp Leu Glu Val Glu Van Damme et al., 2010
splicing factor U2AF 65 kDa subunit P26369 2-475 peptide-Asp128+Gly-peptide N MS Met Thr Pro Asp Gly Leu Ala Val Van Damme et al., 2009 22280
Splicing factor U2AF 65 kDa subunit P26368 2-475 peptide-Asp128+Gly-peptide P MS Met Thr Pro Asp Gly Leu Ala Val Van Damme et al., 2009
Splicing factor U2AF 65 kDa subunit P26368 2-475 peptide-Leu130+Ala-peptide P MS Pro Asp Gly Leu Ala Val Thr Pro Van Damme et al., 2009
Splicing factor U2AF 65 kDa subunit P26368 2-475 peptide-Val132+Thr-peptide P MS Gly Leu Ala Val Thr Pro Thr Pro Van Damme et al., 2009
Splicing factor U2AF 65 kDa subunit P26368 2-475 peptide-Asp467+Ser-peptide P MS Cys Asp Pro Asp Ser Tyr His Arg Van Damme et al., 2009
Splicing factor, arginine/serine-rich 15 O95104 1-1147 Peptide-Asp774+Thr-Peptide N MS Ile Asn Glu Asp Thr Thr Lys Asp Van Damme et al., 2010
Splicing factor, arginine/serine-rich 19 Q9H7N4 1-1312 Peptide-Asp462+Leu-Peptide N MS Leu Gln Val Asp Leu Gly Glu Pro Van Damme et al., 2010
Splicing factor, proline- and glutamine-rich P23246 1-707 Peptide-Asp525+Ala-Peptide N MS Glu Met Glu Asp Ala Tyr His Glu Van Damme et al., 2010
Splicing factor, suppressor of white-apricot homolog Q12872 1-915 Peptide-Asp156+Tyr-Peptide N MS Tyr Gly Ser Asp Tyr Tyr Asp Pro Van Damme et al., 2010
Splicing regulatory glutamine/lysine-rich protein 1 Q8WXA9 1-508 Peptide-Asp468+Ser-Peptide N MS Lys Glu Pro Asp Ser Ser Val Ser Van Damme et al., 2010
Splicing regulatory glutamine/lysine-rich protein 1 Q8WXA9 1-508 Peptide-Val471+Ser-Peptide N MS Asp Ser Ser Val Ser Lys Glu Val Van Damme et al., 2010
Splicing regulatory glutamine/lysine-rich protein 1 Q8WXA9 1-508 Peptide-Glu180+Ser-Peptide N MS Ile Glu Pro Glu Ser Gly Lys Ser Van Damme et al., 2010
Splicing regulatory glutamine/lysine-rich protein 1 Q8WXA9 1-508 Peptide-Gln489+His-Peptide N MS Asn Lys Ile Gln His Asn Gly Asn Van Damme et al., 2010
squamous cell carcinoma antigen recognized by T-cells 3 Q9JLI8 2-962 peptide-Asp89+Glu-peptide N MS Trp Glu Tyr Asp Glu Glu Glu Glu Van Damme et al., 2009 25910
Squamous cell carcinoma antigen recognized by T-cells 3 Q15020 2-963 peptide-Asp56+Gln-peptide P MS Pro Ala Trp Asp Gln Gln Glu Glu Van Damme et al., 2009
SRSF protein kinase 1 Q96SB4 1-655 Peptide-Gln23+Arg-Peptide N MS Asp Lys Ala Gln Arg Lys Ser Glu Van Damme et al., 2010
SRSF protein kinase 1 Q96SB4 1-655 Peptide-Cys356+Asn-Peptide N MS Glu Ile Asn Cys Asn Gly Val Ile Van Damme et al., 2010
SRSF protein kinase 2 P78362 1-688 peptide-Asp314+Gln-peptide P MS Pro Ser Asn Asp Gln Asp Gly Glu Van Damme et al., 2009
Staphylococcal nuclease domain-containing protein 1 Q7KZF4 2-910 Peptide-Asp510+Thr-Peptide N MS Ile Ser Gly Asp Thr Gln Lys Ala Van Damme et al., 2010
STE20-like serine/threonine-protein kinase O54988 1-1233 peptide-Asp813+Ser-peptide N MS Ile Val Thr Asp Ser Asp Ser Lys Van Damme et al., 2009 22270
STE20-like serine/threonine-protein kinase Q9H2G2 1-1235 Peptide-Asp815+Ser-Peptide N MS Ile Val Thr Asp Ser Asp Ser Lys Van Damme et al., 2010
STE20/SPS1-related proline-alanine-rich protein kinase Q9UEW8 1-545 peptide-Arg88+Val-peptide P MS Arg Gln Glu Arg Val Ala Ile Lys Van Damme et al., 2009
Stress-induced-phosphoprotein 1 P31948 1-543 peptide-Asp186+Leu-peptide P MS Leu Gly Val Asp Leu Gly Ser Met Bredemeyer et al., 2006
striatin O43815 1-780 peptide-Asp436+Ser-peptide P MS Asn Glu Ala Asp Ser Leu Thr Tyr Van Damme et al., 2009 22274
striatin O55106 1-780 peptide-Asp436+Ser-peptide N MS Asn Glu Ala Asp Ser Leu Ala Tyr Van Damme et al., 2009 22275
striatin O55106 1-780 peptide-Asp289+Phe-peptide N MS Lys Glu Phe Asp Phe Leu Val Thr Van Damme et al., 2009 22276
Striatin O43815 1-780 peptide-Asp243+Phe-peptide P MS Ala Ala Ala Asp Phe Ser Asp Glu Van Damme et al., 2009
Striatin O43815 1-780 peptide-Asp289+Phe-peptide P MS Lys Glu Phe Asp Phe Leu Val Thr Van Damme et al., 2009
Striatin-3 Q13033 1-797 Peptide-Asp306+Phe-Peptide N MS Lys Glu Phe Asp Phe Leu Val Thr Van Damme et al., 2010
Striatin-3 Q13033 1-797 Peptide-Asp452+Ala-Peptide N MS Val Thr Asn Asp Ala Asp Tyr Ser Van Damme et al., 2010
striatin-4 P58404 1-760 peptide-Asp320+Phe-peptide N MS Asn Glu Phe Asp Phe Leu Gly Ser Van Damme et al., 2009 22278
Striatin-4 Q9NRL3 1-753 peptide-Asp320+Phe-peptide P MS Asn Glu Phe Asp Phe Leu Gly Ser Van Damme et al., 2009
Structural maintenance of chromosomes protein 4 Q9NTJ3 1-1288 Peptide-Asp24+Gly-Peptide N MS Pro Ser Pro Asp Gly Ala Ser Ser Van Damme et al., 2010
Structural maintenance of chromosomes protein 4 Q9NTJ3 1-1288 Peptide-Glu47+Thr-Peptide N MS Thr Ala Ala Glu Thr Ala Ser Glu Van Damme et al., 2010
Structure-specific endonuclease subunit SLX4 Q8IY92 1-1834 Peptide-Asp265+Ala-Peptide N MS Pro Glu Ser Asp Ala Ala Val Ala Van Damme et al., 2010
Suc-Ile-Glu-Thr-Asp-NHPhNO2 Suc-Ile-Glu-Thr-Asp+NHPhNO2 S Ile Glu Thr Asp NAN - - - Froelich, 2004
SUMO-activating enzyme subunit 1 Q9UBE0 1-346 Peptide-Asp285+Leu-Peptide N MS Ile Ser Pro Asp Leu Leu Pro Glu Van Damme et al., 2010
Superkiller viralicidic activity 2-like 2 P42285 2-1042 Peptide-Asp89+Leu-Peptide N MS Ile Thr Glu Asp Leu Ser Leu Ala Van Damme et al., 2010
Suppressor of G2 allele of SKP1 homolog Q9Y2Z0 2-365 Peptide-Lys325+Arg-Peptide N MS Asp Glu Val Lys Arg Ala Met Asn Van Damme et al., 2010
suppressor of SWI4 1 homolog Q91YU8 1-470 peptide-Asp361+Ser-peptide N MS Ala Asp Gly Asp Ser Asp Ala Glu Van Damme et al., 2009 25913
Suppressor of SWI4 1 homolog Q9NQ55 1-473 Peptide-Asp401+Leu-Peptide N MS Pro Ser Glu Asp Leu Phe Pro Glu Van Damme et al., 2010
Surfeit locus protein 6 O75683 1-361 Peptide-Glu109+Ser-Peptide N MS Thr Glu Pro Glu Ser Val Phe Ala Van Damme et al., 2010
SURP and G-patch domain-containing protein 2 Q8IX01 1-1082 Peptide-Asp655+Cys-Peptide N MS Thr Ser Ala Asp Cys Ala Val Arg Van Damme et al., 2010
SURP and G-patch domain-containing protein 2 Q8IX01 1-1082 peptide-Glu801+Ile-peptide P MS Val Gly Pro Glu Ile Glu Gln Phe Van Damme et al., 2009
Survival motor neuron protein Q16637 2-294 Peptide-Asn155+Ala-Peptide N MS Ile Glu Gln Asn Ala Gln Glu Asn Van Damme et al., 2010
SWI/SNF complex subunit SMARCC1 Q92922 2-1105 Peptide-Asp827+Thr-Peptide N MS Val Ser Glu Asp Thr Lys Ser Glu Van Damme et al., 2010
SWI/SNF complex subunit SMARCC1 Q92922 2-1105 peptide-Asp407+Leu-peptide P MS Thr Val Ala Asp Leu Asp Glu Gln Van Damme et al., 2009
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 Q969G3 1-411 Peptide-Asp281+Met-Peptide N MS Val Glu Val Asp Met Glu Lys Ile Van Damme et al., 2010
Symplekin Q92797 2-1274 Peptide-Asp1253+Ala-Peptide N MS Val Gly Glu Asp Ala Met Lys Thr Van Damme et al., 2010
Syntaxin-10 O60499 1-249 peptide-Asp196+Ala-peptide P MS Ile Met Leu Asp Ala Phe Ala Gln Van Damme et al., 2009
Syntaxin-binding protein 1 P61764 1-594 Peptide-Asp371+Leu-Peptide N MS Val Glu Gln Asp Leu Ala Met Gly Van Damme et al., 2010
Syntaxin-binding protein 3 O00186 1-592 peptide-Glu435+Ser-peptide P MS Ile Glu Asn Glu Ser Asp Met Ile Van Damme et al., 2009
T-complex protein 1 subunit alpha P17987 1-556 peptide-Asp359+Glu-peptide P MS Ile Cys Asp Asp Glu Leu Ile Leu Van Damme et al., 2009
T-complex protein 1 subunit delta P50991 2-539 peptide-Asp268+Tyr-peptide P MS Val Val Ser Asp Tyr Ala Gln Met Van Damme et al., 2009
Target of EGR1 protein 1 Q96GM8 2-510 Peptide-Asp328+Glu-Peptide N MS Ile Asp Thr Asp Glu Ala Ala Ala Van Damme et al., 2010
Target of EGR1 protein 1 Q96GM8 2-510 Peptide-Asp373+Ser-Peptide N MS Val Cys Gly Asp Ser Ile Lys Pro Van Damme et al., 2010
Target of Myb protein 1 O60784 1-492 Peptide-Asp184+Ser-Peptide N MS Val Gly Thr Asp Ser Ser Gln Gln Van Damme et al., 2010
Targeting protein for Xklp2 Q9ULW0 1-747 Peptide-Asp434+Leu-Peptide N MS Ile Gly Phe Asp Leu Glu Ile Glu Van Damme et al., 2010
TATA-binding protein-associated factor 2N Q92804 1-592 Peptide-Asp114+Ser-Peptide N MS Gly Gln Gln Asp Ser Tyr Asp Gln Van Damme et al., 2010
TBC1 domain family member 10B Q4KMP7 1-808 Peptide-Asp293+Ser-Peptide N MS Met Gly Ser Asp Ser Glu Ile Asn Van Damme et al., 2010
TBC1 domain family member 4 O60343 1-1298 peptide-Asp303+Ser-peptide P MS Ile Leu Glu Asp Ser Gly Phe Asp Van Damme et al., 2009
TBC1 domain family member 4 O60343 1-1298 peptide-Leu821+Ser-peptide P MS Val Val Phe Leu Ser Gly Glu Asp Van Damme et al., 2009
TBC1 domain family member 7 Q9P0N9 1-293 peptide-His90+Ala-peptide P MS Asp Val Leu His Ala Leu Lys Val Van Damme et al., 2009
Telomerase-binding protein EST1A Q86US8 1-1419 peptide-Asp355+Ala-peptide P MS Val Thr Phe Asp Ala Glu Ala Met Van Damme et al., 2009
Telomere-associated protein RIF1 Q5UIP0 1-2472 Peptide-Asp1396+Gln-Peptide N MS Ile Ser Ala Asp Gln Met Val Asn Van Damme et al., 2010
Testis-expressed sequence 264 protein Q9Y6I9 33-313 peptide-Asp219+Thr-peptide P MS Thr Gly Ala Asp Thr Met Ser Asp Van Damme et al., 2009
testis-specific Y-encoded-like protein 2 Q7TQI8 1-677 peptide-Asp169+Glu-peptide N MS Ile Val Glu Asp Glu Asp Glu Asp Van Damme et al., 2009 25914
Testis-specific Y-encoded-like protein 6 Q8N831 1-410 Peptide-Asp38+Met-Peptide N MS Val Met Ala Asp Met Phe Asp Gly Van Damme et al., 2010
tetratricopeptide repeat protein 39B Q8BX40 1-617 peptide-Asp11+Ala-peptide N MS Val Glu Leu Asp Ala Asp Glu Asp Van Damme et al., 2009 25789
Tetratricopeptide repeat protein 39B Q8BYY4 1-617 peptide-Asp11+Ala-peptide P MS Val Glu Leu Asp Ala Asp Glu Asp Van Damme et al., 2009
tetratricopeptide repeat protein 4 Q8R3H9 1-386 peptide-Asp15+Ala-peptide N MS Ala Ser Met Asp Ala Phe Leu Glu Van Damme et al., 2009 25915
Thioredoxin domain-containing protein 17 Q9BRA2 1-123 peptide-Glu109+Cys-peptide P MS Val Glu Ser Glu Cys Leu Gln Ala Van Damme et al., 2009
THO complex subunit 1 Q96FV9 1-657 Peptide-Asp447+Asn-Peptide N MS Leu Cys Pro Asp Asn Met Glu Ala Van Damme et al., 2010
THO complex subunit 2 Q8NI27 1-1593 Peptide-Ala1216+Ser-Peptide N MS Ile Gly Ser Ala Ser Lys Ser Asp Van Damme et al., 2010
THO complex subunit 4 Q86V81 2-257 Met-Ala-Asp3+Lys-Peptide N MS - Met Ala Asp Lys Met Asp Met Van Damme et al., 2010
THO complex subunit 4 Q86V81 2-257 Peptide-Asp10+Asp-Peptide N MS Met Ser Leu Asp Asp Ile Ile Lys Van Damme et al., 2010
THO complex subunit 4 Q86V81 2-257 Peptide-Glu241+Glu-Peptide N MS Leu Ser Ala Glu Glu Leu Asp Ala Van Damme et al., 2010
THO complex subunit 4 Q86V81 2-257 Peptide-Asp248+Ala-Peptide N MS Ala Gln Leu Asp Ala Tyr Asn Ala Van Damme et al., 2010
Thyroid hormone receptor-associated protein 3 Q9Y2W1 1-955 Peptide-Asp225+Ala-Peptide N MS Pro Trp Pro Asp Ala Thr Tyr Gly Van Damme et al., 2010
Thyroid hormone receptor-associated protein 3 Q9Y2W1 1-955 Peptide-Asp391+Ser-Peptide N MS Met Lys Ser Asp Ser Phe Ala Pro Van Damme et al., 2010
Thyroid hormone receptor-associated protein 3 Q9Y2W1 1-955 Peptide-Asp574+Ser-Peptide N MS Val Arg Met Asp Ser Phe Asp Glu Plasman et al., 2011
Thyroid hormone receptor-associated protein 3 Q9Y2W1 1-955 peptide-Asp424+Phe-peptide P MS Lys Met Ala Asp Phe His Lys Glu Van Damme et al., 2009
Tight junction protein ZO-2 Q9UDY2 1-1190 Peptide-Asp910+Tyr-Peptide N MS Met Gly Ala Asp Tyr Leu Ser Cys Van Damme et al., 2010
Tight junction-associated protein 1 Q5JTD0 1-557 Peptide-Asp75+Cys-Peptide N MS Ile Gly Gln Asp Cys Leu Glu Leu Van Damme et al., 2010
Transcription activator BRG1 P51532 1-1647 Peptide-Asp694+Ser-Peptide N MS Pro Asp Pro Asp Ser Asp Asp Val Van Damme et al., 2010
Transcription activator BRG1 P51532 1-1647 peptide-Asp1351+Ala-peptide P MS Ile Lys Asp Asp Ala Glu Val Glu Van Damme et al., 2009
transcription elongation factor A protein 1 P10711 1-301 peptide-Asp164+Glu-peptide N MS Ile Gly Ala Asp Glu Glu Glu Leu Van Damme et al., 2009 25917
Transcription elongation factor B polypeptide 3 Q14241 1-798 Peptide-Glu434+Ser-Peptide N MS Met Ser Phe Glu Ser Tyr Leu Ser Van Damme et al., 2010
Transcription elongation factor B polypeptide 3 Q14241 1-798 Peptide-Asp137+Tyr-Peptide N MS Met Glu Gly Asp Tyr Gln Glu Thr Van Damme et al., 2010
transcription elongation factor SPT6 Q62383 1-1726 peptide-Asp767+Asp-peptide N MS Val Glu Glu Asp Asp Asp Phe Met Van Damme et al., 2009 22271
Transcription elongation factor SPT6 Q7KZ85 1-1726 Peptide-Glu106+Asn-Peptide N MS Leu Ile Glu Glu Asn Leu Gly Val Van Damme et al., 2010
Transcription elongation factor SPT6 Q7KZ85 1-1726 Peptide-Asn107+Leu-Peptide N MS Ile Glu Glu Asn Leu Gly Val Lys Van Damme et al., 2010
Transcription elongation factor SPT6 Q7KZ85 2-1726 peptide-Asp767+Asp-peptide P MS Val Glu Glu Asp Asp Asp Phe Met Van Damme et al., 2009
Transcription factor 25 Q8R3L2 1-676 peptide-Glu68+Asp-peptide P MS Ile Asn Thr Glu Asp Leu Glu Asp Van Damme et al., 2009
Transcription factor BTF3 P20290 1-206 Peptide-Lys46+Glu-Peptide N MS Pro Gln Met Lys Glu Thr Ile Met Van Damme et al., 2010
Transcription factor Dp-1 Q14186 1-410 Peptide-Glu157+Ser-Peptide N MS Leu Pro Asn Glu Ser Ala Tyr Asp Van Damme et al., 2010
Transcription factor Sp4 Q02446 1-784 peptide-Asp769+Ser-peptide P MS Ile Ser Gln Asp Ser Asn Pro Ala Van Damme et al., 2009
Transcription initiation factor IIB Q00403 1-316 Peptide-Glu36+Cys-Peptide N MS Ile Cys Pro Glu Cys Gly Leu Val Van Damme et al., 2010
Transcription initiation factor IIE subunit beta P29084 1-291 Peptide-Asp226+Ser-Peptide N MS Val Thr Val Asp Ser Met Asp Glu Van Damme et al., 2010
Transcription intermediary factor 1-beta Q13263 2-835 Peptide-Asp316+Ala-Peptide N MS Leu Val Asn Asp Ala Gln Lys Val Van Damme et al., 2010
Transcription intermediary factor 1-beta Q13263 2-835 Peptide-Met579+Ala-Peptide N MS Pro Val Leu Met Ala Leu Ala Glu Van Damme et al., 2010
Transcription intermediary factor 1-beta Q13263 2-835 Peptide-Asp674+Leu-Peptide N MS Val Leu Pro Asp Leu Lys Glu Glu Van Damme et al., 2010
Transcription intermediary factor 1-beta Q13263 2-835 Peptide-Asp726+Ser-Peptide N MS Leu Ala Thr Asp Ser Thr Phe Ser Van Damme et al., 2010
Transcription intermediary factor 1-beta Q13263 2-835 Peptide-Gly735+Gly-Peptide N MS Asp Gln Pro Gly Gly Thr Leu Asp Van Damme et al., 2010
Transcriptional repressor CTCF P49711 1-727 Met-Glu-Gly-Asp4+Ala-Peptide N MS Met Glu Gly Asp Ala Val Glu Ala Van Damme et al., 2010
Transcriptional repressor CTCF P49711 1-727 Peptide-Glu12+Ser-Peptide N MS Ile Val Glu Glu Ser Glu Thr Phe Van Damme et al., 2010
Transcriptional repressor CTCF P49711 1-727 peptide-Asp222+Val-peptide P MS Lys Asp Val Asp Val Ser Val Tyr Van Damme et al., 2009
Transcriptional repressor NF-X1 Q12986 1-1120 Peptide-Asp16+Ala-Peptide N MS Phe Asn Thr Asp Ala Ala Glu Phe Van Damme et al., 2010
transcriptional repressor p66 alpha Q8CHY6 1-629 peptide-Asp98+Val-peptide N MS Pro Ser Pro Asp Val Ile Val Leu Van Damme et al., 2009 25920
Transcriptional repressor p66-alpha Q86YP4 1-633 Peptide-Asp102+Val-Peptide N MS Pro Ser Pro Asp Val Ile Val Leu Plasman et al., 2011 22244
Transcriptional repressor p66-beta Q8WXI9 1-593 peptide-Asp124+Ile-peptide P MS Pro Ser Pro Asp Ile Ile Val Leu Van Damme et al., 2009
Transforming acidic coiled-coil-containing protein 3 Q9Y6A5 1-838 Peptide-Asp604+Phe-Peptide N MS Val Glu Phe Asp Phe Leu Gly Ala Van Damme et al., 2010
Translation initiation factor eIF-2B subunit epsilon Q13144 2-721 Peptide-Asp572+Asn-Peptide N MS Ile Ser Cys Asp Asn Leu Val Leu Van Damme et al., 2010
Translation initiation factor eIF-2B subunit gamma Q9NR50 1-452 Peptide-Asp355+Ser-Peptide N MS Val Gly Val Asp Ser Leu Ile Gly Van Damme et al., 2010
Translational activator GCN1 Q92616 2-2671 Peptide-Asp626+Ala-Peptide N MS Leu Val Thr Asp Ala Gly Glu Val Van Damme et al., 2010
Translational activator GCN1 Q92616 2-2671 peptide-Asp4+Thr-peptide P MS Met Ala Ala Asp Thr Gln Val Ser Van Damme et al., 2009
Translationally-controlled tumor protein P13693 1-172 Peptide-Glu12+Met-Peptide N MS Ser His Asp Glu Met Phe Ser Asp Van Damme et al., 2010
Translationally-controlled tumor protein P13693 1-172 Peptide-Cys28+Leu-Peptide N MS Asp Gly Leu Cys Leu Glu Val Glu Van Damme et al., 2010
Translationally-controlled tumor protein P13693 1-172 Peptide-Asn51+Ala-Peptide N MS Ile Gly Gly Asn Ala Ser Ala Glu Van Damme et al., 2010
Translationally-controlled tumor protein P13693 1-172 peptide-Met13+Phe-peptide P MS His Asp Glu Met Phe Ser Asp Ile Van Damme et al., 2009
Translationally-controlled tumor protein P13693 1-172 peptide-Leu29+Glu-peptide P MS Gly Leu Cys Leu Glu Val Glu Gly Van Damme et al., 2009
Translationally-controlled tumor protein P13693 1-172 peptide-Glu30+Val-peptide P MS Leu Cys Leu Glu Val Glu Gly Lys Van Damme et al., 2009
Transportin-3 Q9Y5L0 1-923 Peptide-Asp385+His-Peptide N MS Leu Glu Pro Asp His Glu Gly Val Van Damme et al., 2010
treacle protein O08784 1-1320 peptide-Asp668+Ser-peptide N MS Leu Glu Glu Asp Ser Ser Ser Glu Van Damme et al., 2009 25921
Treacle protein Q13428 1-1488 Peptide-Asp68+Ala-Peptide N MS Ala Glu Glu Asp Ala Ala Leu Gln Van Damme et al., 2010
Treacle protein Q13428 1-1488 Peptide-Ala221+Gln-Peptide N MS Val Lys Pro Ala Gln Val Lys Ala Van Damme et al., 2010
Treacle protein Q13428 1-1488 Peptide-Asn166+Thr-Peptide N MS Pro Ser Ala Asn Thr Thr Leu Val Van Damme et al., 2010
Treacle protein Q13428 1-1488 Peptide-Asp474+Ser-Peptide N MS Gln Glu Glu Asp Ser Arg Ser Ser Van Damme et al., 2010
Treacle protein Q13428 1-1488 Peptide-Glu865+Glu-Peptide N MS Thr Gly Pro Glu Glu Asp Ser Gly Van Damme et al., 2010
Treacle protein Q13428 1-1488 Peptide-Asp867+Ser-Peptide N MS Pro Glu Glu Asp Ser Gly Ser Ser Van Damme et al., 2010
Treacle protein Q13428 1-1488 peptide-Ser922+Ala-peptide P MS Thr Gly Pro Ser Ala Ala Gln Ala Van Damme et al., 2009
Trifunctional enzyme subunit alpha, mitochondrial P40939 37-763 Peptide-Asp468+His-Peptide N MS Val Ile Pro Asp His Cys Ile Phe Van Damme et al., 2010
Trifunctional enzyme subunit alpha, mitochondrial P40939 37-763 peptide-Asp594+Val-peptide P MS Val Gly Val Asp Val Ala Lys His Van Damme et al., 2009
Trimethylguanosine synthase Q96RS0 1-853 Peptide-Asp83+Glu-Peptide N MS Ile Gly Leu Asp Glu Ser Glu Leu Van Damme et al., 2010
Trinucleotide repeat-containing gene 6B protein Q9UPQ9 1-1833 peptide-Asp631+Thr-peptide P MS Ile Lys Gln Asp Thr Val Trp Asp Van Damme et al., 2009
Tripartite motif-containing protein 44 Q96DX7 1-344 Peptide-Asp24+Glu-Peptide N MS Cys Glu Pro Asp Glu Ala Pro Gly Van Damme et al., 2010
Tripeptidyl-peptidase 2 P29144 2-1249 Peptide-Asp390+Met-Peptide N MS Val Ser Pro Asp Met Met Val Ala Van Damme et al., 2010
Tripeptidyl-peptidase 2 P29144 2-1249 Peptide-Asp490+Asn-Peptide N MS Val Lys Ala Asp Asn Ile Glu Val Van Damme et al., 2010
TRMT1-like protein Q7Z2T5 1-733 Peptide-Asp40+Ser-Peptide N MS Pro Ala Pro Asp Ser Ala Leu Asp Van Damme et al., 2010
tRNA (uracil-5-)-methyltransferase homolog A Q8IZ69 1-625 Peptide-Asp252+Gly-Peptide N MS Val Gly Val Asp Gly Glu Asp Asn Van Damme et al., 2010
tRNA-splicing endonuclease subunit Sen2 Q8NCE0 1-465 Peptide-Asp176+Ser-Peptide N MS Val Asn Gly Asp Ser Gly Lys Ser Van Damme et al., 2010
tRNA-splicing ligase RtcB homolog Q9Y3I0 1-505 Peptide-Asp272+Ala-Peptide N MS Val Ala Thr Asp Ala Leu Val Ala Van Damme et al., 2010
Tropomyosin alpha-1 chain P09493 1-284 peptide-Asp175+Leu-peptide P MS Ile Glu Ser Asp Leu Glu Arg Ala Van Damme et al., 2009
Tropomyosin alpha-3 chain P06753 1-285 peptide-Asp176+Leu-peptide P MS Ile Glu Gly Asp Leu Glu Arg Thr Van Damme et al., 2009
tubulin alpha-1A chain Q71U36 1-451 peptide-Asp438+Ser-peptide P Val Gly Val Asp Ser Val Glu Gly Adrain et al., 2006 23134
tubulin alpha-1A chain Q71U36 1-451 peptide-Asp251+Leu-peptide N MS Leu Asn Val Asp Leu Thr Glu Phe Van Damme et al., 2009 22190
Tubulin alpha-1A chain Q71U36 1-451 Peptide-Asp69+Leu-Peptide N MS Val Phe Val Asp Leu Glu Pro Thr Plasman et al., 2011
Tubulin alpha-1A chain Q71U36 1-451 Peptide-Glu90+Gln-Peptide N MS Phe His Pro Glu Gln Leu Ile Thr Plasman et al., 2011
Tubulin alpha-1A chain P68369 1-451 peptide-Asp69+Leu-peptide P MS Val Phe Val Asp Leu Glu Pro Thr Van Damme et al., 2009
Tubulin alpha-1A chain P68369 1-451 peptide-Glu90+Gln-peptide P MS Phe His Pro Glu Gln Leu Ile Thr Van Damme et al., 2009
Tubulin alpha-1A chain P68369 1-451 peptide-Asp251+Leu-peptide P MS Leu Asn Val Asp Leu Thr Glu Phe Van Damme et al., 2009
Tubulin alpha-1A chain Q71U36 1-451 peptide-Leu70+Glu-peptide P MS Phe Val Asp Leu Glu Pro Thr Val Van Damme et al., 2009
Tubulin alpha-1A chain Q71U36 1-451 peptide-Glu207+Ala-peptide P MS Val Asp Asn Glu Ala Ile Tyr Asp Van Damme et al., 2009
Tubulin alpha-1A chain Q71U36 1-451 peptide-Asp431+Tyr-peptide P MS Leu Glu Lys Asp Tyr Glu Glu Val Van Damme et al., 2009
tubulin alpha-1B chain P05213 1-451 peptide-Asp69+Leu-peptide N MS Val Phe Val Asp Leu Glu Pro Thr Van Damme et al., 2009 22188
Tubulin alpha-1B chain P68363 1-451 Peptide-Asp205+Asn-Peptide N MS Phe Met Val Asp Asn Glu Ala Ile Van Damme et al., 2010
Tubulin alpha-1B chain P68363 1-451 Peptide-Asp438+Ser-Peptide N MS Val Gly Val Asp Ser Val Glu Gly Van Damme et al., 2010
Tubulin alpha-1B chain P05213 1-451 peptide-Glu90+Gln-peptide P MS Phe His Pro Glu Gln Leu Ile Thr Van Damme et al., 2009
Tubulin alpha-1B chain P05213 1-451 peptide-Asp251+Leu-peptide P MS Leu Asn Val Asp Leu Thr Glu Phe Van Damme et al., 2009
Tubulin alpha-1B chain P68363 1-451 peptide-Leu70+Glu-peptide P MS Phe Val Asp Leu Glu Pro Thr Val Van Damme et al., 2009
Tubulin alpha-1B chain P68363 1-451 peptide-Glu90+Gln-peptide P MS Phe His Pro Glu Gln Leu Ile Thr Van Damme et al., 2009
Tubulin alpha-1B chain P68363 1-451 peptide-Glu207+Ala-peptide P MS Val Asp Asn Glu Ala Ile Tyr Asp Van Damme et al., 2009
Tubulin alpha-1B chain P68363 1-451 peptide-Asp251+Leu-peptide P MS Leu Asn Val Asp Leu Thr Glu Phe Van Damme et al., 2009
Tubulin alpha-1B chain P68363 1-451 peptide-Asp367+Leu-peptide P MS Pro Gly Gly Asp Leu Ala Lys Val Van Damme et al., 2009
Tubulin alpha-1B chain P68363 1-451 peptide-Asp431+Tyr-peptide P MS Leu Glu Lys Asp Tyr Glu Glu Val Van Damme et al., 2009
Tubulin alpha-1C chain Q9BQE3 1-449 Peptide-Asp438+Ser-Peptide N MS Val Gly Ala Asp Ser Ala Asp Gly Van Damme et al., 2010
Tubulin alpha-1C chain P68373 1-449 peptide-Asp69+Leu-peptide P MS Val Phe Val Asp Leu Glu Pro Thr Van Damme et al., 2009
Tubulin alpha-1C chain P68373 1-449 peptide-Glu90+Gln-peptide P MS Phe His Pro Glu Gln Leu Ile Thr Van Damme et al., 2009
Tubulin alpha-1C chain P68373 1-449 peptide-Asp251+Leu-peptide P MS Leu Asn Val Asp Leu Thr Glu Phe Van Damme et al., 2009
Tubulin alpha-1C chain Q9BQE3 1-449 peptide-Leu70+Glu-peptide P MS Phe Val Asp Leu Glu Pro Thr Val Van Damme et al., 2009
Tubulin alpha-1C chain Q9BQE3 1-449 peptide-Glu90+Gln-peptide P MS Phe His Pro Glu Gln Leu Ile Thr Van Damme et al., 2009
Tubulin alpha-1C chain Q9BQE3 1-449 peptide-Asp205+Asn-peptide P MS Phe Met Val Asp Asn Glu Ala Ile Van Damme et al., 2009
Tubulin alpha-1C chain Q9BQE3 1-449 peptide-Glu207+Ala-peptide P MS Val Asp Asn Glu Ala Ile Tyr Asp Van Damme et al., 2009
Tubulin alpha-1C chain Q9BQE3 1-449 peptide-Asp251+Leu-peptide P MS Leu Asn Val Asp Leu Thr Glu Phe Van Damme et al., 2009
Tubulin alpha-1C chain Q9BQE3 1-449 peptide-Asp367+Leu-peptide P MS Pro Gly Gly Asp Leu Ala Lys Val Van Damme et al., 2009
Tubulin alpha-1C chain Q9BQE3 1-449 peptide-Asp431+Tyr-peptide P MS Leu Glu Lys Asp Tyr Glu Glu Val Van Damme et al., 2009
Tubulin alpha-3 chain P05214 1-450 peptide-Glu90+Gln-peptide P MS Phe His Pro Glu Gln Leu Ile Thr Van Damme et al., 2009
Tubulin alpha-3 chain P05214 1-450 peptide-Asp251+Leu-peptide P MS Leu Asn Val Asp Leu Thr Glu Phe Van Damme et al., 2009
Tubulin alpha-3C/D chain Q13748 1-450 peptide-Glu90+Gln-peptide P MS Phe His Pro Glu Gln Leu Ile Thr Van Damme et al., 2009
Tubulin alpha-3C/D chain Q13748 1-450 peptide-Asp205+Asn-peptide P MS Phe Met Val Asp Asn Glu Ala Ile Van Damme et al., 2009
Tubulin alpha-3C/D chain Q13748 1-450 peptide-Glu207+Ala-peptide P MS Val Asp Asn Glu Ala Ile Tyr Asp Van Damme et al., 2009
Tubulin alpha-3C/D chain Q13748 1-450 peptide-Asp251+Leu-peptide P MS Leu Asn Val Asp Leu Thr Glu Phe Van Damme et al., 2009
Tubulin alpha-3C/D chain Q13748 1-450 peptide-Asp367+Leu-peptide P MS Pro Gly Gly Asp Leu Ala Lys Val Van Damme et al., 2009
Tubulin alpha-3E chain Q6PEY2 1-450 peptide-Asp205+Asn-peptide P MS Phe Met Val Asp Asn Glu Ala Ile Van Damme et al., 2009
Tubulin alpha-3E chain Q6PEY2 1-450 peptide-Glu207+Ala-peptide P MS Val Asp Asn Glu Ala Ile Tyr Asp Van Damme et al., 2009
Tubulin alpha-3E chain Q6PEY2 1-450 peptide-Asp251+Leu-peptide P MS Leu Asn Val Asp Leu Thr Glu Phe Van Damme et al., 2009
Tubulin alpha-3E chain Q6PEY2 1-450 peptide-Asp367+Leu-peptide P MS Pro Gly Gly Asp Leu Ala Lys Val Van Damme et al., 2009
Tubulin alpha-4A chain P68366 1-448 Peptide-Lys430+Asp-Peptide N MS Ala Leu Glu Lys Asp Tyr Glu Glu Van Damme et al., 2010
Tubulin alpha-4A chain P68366 1-448 peptide-Asp69+Leu-peptide P MS Val Phe Val Asp Leu Glu Pro Thr Van Damme et al., 2009
Tubulin alpha-4A chain P68366 1-448 peptide-Glu90+Gln-peptide P MS Phe His Pro Glu Gln Leu Ile Thr Van Damme et al., 2009
Tubulin alpha-4A chain P68366 1-448 peptide-Asp205+Asn-peptide P MS Phe Met Val Asp Asn Glu Ala Ile Van Damme et al., 2009
Tubulin alpha-4A chain P68366 1-448 peptide-Glu207+Ala-peptide P MS Val Asp Asn Glu Ala Ile Tyr Asp Van Damme et al., 2009
Tubulin alpha-4A chain P68366 1-448 peptide-Asp251+Leu-peptide P MS Leu Asn Val Asp Leu Thr Glu Phe Van Damme et al., 2009
Tubulin alpha-4A chain P68366 1-448 peptide-Asp367+Leu-peptide P MS Pro Gly Gly Asp Leu Ala Lys Val Van Damme et al., 2009
Tubulin alpha-4A chain P68366 1-448 peptide-Asp431+Tyr-peptide P MS Leu Glu Lys Asp Tyr Glu Glu Val Van Damme et al., 2009
Tubulin alpha-4A chain P68366 1-448 peptide-Asp438+Ser-peptide P MS Val Gly Ile Asp Ser Tyr Glu Asp Van Damme et al., 2009
Tubulin alpha-4A chain P68368 1-448 peptide-Glu90+Gln-peptide P MS Phe His Pro Glu Gln Leu Ile Thr Van Damme et al., 2009
Tubulin alpha-4A chain P68368 1-448 peptide-Asp251+Leu-peptide P MS Leu Asn Val Asp Leu Thr Glu Phe Van Damme et al., 2009
Tubulin alpha-8 chain Q9JJZ2 1-449 peptide-Glu90+Gln-peptide P MS Phe His Pro Glu Gln Leu Ile Thr Van Damme et al., 2009
Tubulin alpha-8 chain Q9JJZ2 1-449 peptide-Asp251+Leu-peptide P MS Leu Asn Val Asp Leu Thr Glu Phe Van Damme et al., 2009
Tubulin alpha-8 chain Q9NY65 1-449 peptide-Glu90+Gln-peptide P MS Phe His Pro Glu Gln Leu Ile Thr Van Damme et al., 2009
Tubulin alpha-8 chain Q9NY65 1-449 peptide-Asp205+Asn-peptide P MS Phe Met Val Asp Asn Glu Ala Ile Van Damme et al., 2009
Tubulin alpha-8 chain Q9NY65 1-449 peptide-Glu207+Ala-peptide P MS Val Asp Asn Glu Ala Ile Tyr Asp Van Damme et al., 2009
Tubulin alpha-8 chain Q9NY65 1-449 peptide-Asp251+Leu-peptide P MS Leu Asn Val Asp Leu Thr Glu Phe Van Damme et al., 2009
Tubulin alpha-8 chain Q9NY65 1-449 peptide-Asp367+Leu-peptide P MS Pro Gly Gly Asp Leu Ala Lys Val Van Damme et al., 2009
Tubulin beta chain P07437 1-444 Peptide-Asp39+Ser-Peptide N MS Tyr His Gly Asp Ser Asp Leu Gln Van Damme et al., 2010
Tubulin beta chain P07437 1-444 Peptide-Asp114+Ser-Peptide N MS Glu Leu Val Asp Ser Val Leu Asp Van Damme et al., 2010
Tubulin beta chain P07437 1-444 Peptide-Glu205+Ala-Peptide N MS Ile Asp Asn Glu Ala Leu Tyr Asp Van Damme et al., 2010
Tubulin beta chain P07437 1-444 Peptide-Asp304+Pro-Peptide N MS Ala Ala Cys Asp Pro Arg His Gly Van Damme et al., 2010
Tubulin beta chain P07437 1-444 peptide-Trp101+Ala-peptide P MS Gly Asn Asn Trp Ala Lys Gly His Van Damme et al., 2009
Tubulin beta-1 chain A2AQ07 1-451 peptide-Glu205+Ala-peptide P MS Ile Asp Asn Glu Ala Leu Tyr Asp Van Damme et al., 2009
Tubulin beta-1 chain Q9H4B7 1-451 peptide-Glu205+Ala-peptide P MS Ile Asp Asn Glu Ala Leu Tyr Asp Van Damme et al., 2009
Tubulin beta-2A chain Q13885 1-445 peptide-Trp101+Ala-peptide P MS Gly Asn Asn Trp Ala Lys Gly His Van Damme et al., 2009
Tubulin beta-2A chain Q13885 1-445 peptide-Asp114+Ser-peptide P MS Glu Leu Val Asp Ser Val Leu Asp Van Damme et al., 2009
Tubulin beta-2A chain Q13885 1-445 peptide-Glu205+Ala-peptide P MS Ile Asp Asn Glu Ala Leu Tyr Asp Van Damme et al., 2009
Tubulin beta-2A chain Q7TMM9 1-445 peptide-Glu205+Ala-peptide P MS Ile Asp Asn Glu Ala Leu Tyr Asp Van Damme et al., 2009
Tubulin beta-2B chain Q9BVA1 1-445 peptide-Trp101+Ala-peptide P MS Gly Asn Asn Trp Ala Lys Gly His Van Damme et al., 2009
Tubulin beta-2B chain Q9BVA1 1-445 peptide-Asp114+Ser-peptide P MS Glu Leu Val Asp Ser Val Leu Asp Van Damme et al., 2009
Tubulin beta-2B chain Q9BVA1 1-445 peptide-Glu205+Ala-peptide P MS Ile Asp Asn Glu Ala Leu Tyr Asp Van Damme et al., 2009
Tubulin beta-2B chain Q9CWF2 1-445 peptide-Glu205+Ala-peptide P MS Ile Asp Asn Glu Ala Leu Tyr Asp Van Damme et al., 2009
Tubulin beta-3 chain Q13509 1-450 peptide-Trp101+Ala-peptide P MS Gly Asn Asn Trp Ala Lys Gly His Van Damme et al., 2009
Tubulin beta-3 chain Q13509 1-450 peptide-Asp114+Ser-peptide P MS Glu Leu Val Asp Ser Val Leu Asp Van Damme et al., 2009
Tubulin beta-3 chain Q13509 1-450 peptide-Glu205+Ala-peptide P MS Ile Asp Asn Glu Ala Leu Tyr Asp Van Damme et al., 2009
Tubulin beta-3 chain Q9ERD7 1-450 peptide-Glu205+Ala-peptide P MS Ile Asp Asn Glu Ala Leu Tyr Asp Van Damme et al., 2009
Tubulin beta-4A chain P04350 1-444 peptide-Glu205+Ala-peptide P MS Ile Asp Asn Glu Ala Leu Tyr Asp Van Damme et al., 2009
Tubulin beta-4A chain Q9D6F9 1-444 peptide-Glu205+Ala-peptide P MS Ile Asp Asn Glu Ala Leu Tyr Asp Van Damme et al., 2009
Tubulin beta-4B chain P68371 1-445 peptide-Trp101+Ala-peptide P MS Gly Asn Asn Trp Ala Lys Gly His Van Damme et al., 2009
Tubulin beta-4B chain P68371 1-445 peptide-Asp114+Ser-peptide P MS Glu Leu Val Asp Ser Val Leu Asp Van Damme et al., 2009
Tubulin beta-4B chain P68371 1-445 peptide-Glu205+Ala-peptide P MS Ile Asp Asn Glu Ala Leu Tyr Asp Van Damme et al., 2009
Tubulin beta-4B chain P68372 1-445 peptide-Glu205+Ala-peptide P MS Ile Asp Asn Glu Ala Leu Tyr Asp Van Damme et al., 2009
Tubulin beta-5 chain P99024 1-444 peptide-Glu205+Ala-peptide P MS Ile Asp Asn Glu Ala Leu Tyr Asp Van Damme et al., 2009
Tubulin beta-6 chain Q922F4 1-447 peptide-Glu205+Ala-peptide P MS Ile Asp Asn Glu Ala Leu Tyr Asp Van Damme et al., 2009
Tubulin beta-6 chain Q9BUF5 1-446 peptide-Glu205+Ala-peptide P MS Ile Asp Asn Glu Ala Leu Tyr Asp Van Damme et al., 2009
Tubulin gamma-1 chain P23258 1-451 peptide-Glu34+Gly-peptide P MS Ile Ser Pro Glu Gly Ile Val Glu Van Damme et al., 2009
Tubulin gamma-1 chain P83887 1-451 peptide-Glu34+Gly-peptide P MS Ile Ser Pro Glu Gly Ile Val Glu Van Damme et al., 2009
Tubulin gamma-2 chain Q8VCK3 1-451 peptide-Glu34+Gly-peptide P MS Ile Ser Pro Glu Gly Ile Val Glu Van Damme et al., 2009
Tubulin gamma-2 chain Q9NRH3 1-451 peptide-Glu34+Gly-peptide P MS Ile Ser Pro Glu Gly Ile Val Glu Van Damme et al., 2009
Tubulin-folding cofactor B Q99426 1-244 Peptide-Glu112+Ala-Peptide N MS Ile Ser Gln Glu Ala Tyr Asp Gln Van Damme et al., 2010
Tubulin-specific chaperone E Q15813 1-527 Peptide-Asp117+Ser-Peptide N MS Ile Gly Phe Asp Ser Ile Met Lys Van Damme et al., 2010
Tumor protein D54 O43399 1-206 Peptide-Asp20+Ser-Peptide N MS Leu Leu Ser Asp Ser Met Thr Asp Van Damme et al., 2010
Tumor suppressor p53-binding protein 1 Q12888 1-1972 Peptide-Asp753+Ser-Peptide N MS Thr Ser Glu Asp Ser Ser Val Val Van Damme et al., 2010
Tumor suppressor p53-binding protein 1 Q12888 1-1972 Peptide-Asp1123+Val-Peptide N MS Met Val Thr Asp Val Leu Glu Asp Van Damme et al., 2010
Tumor suppressor p53-binding protein 1 Q12888 1-1972 Peptide-Asp1620+Asn-Peptide N MS Ile Ser Leu Asp Asn Leu Val Glu Van Damme et al., 2010
Twinfilin-1 Q12792 2-350 peptide-Asp165+Val-peptide P MS Val Gln Thr Asp Val Gly Val Asp Van Damme et al., 2009
Tyrosine-protein kinase ABL1 P00519 1-1130 peptide-Asp36+Phe-peptide P CS Val Ala Ser Asp Phe Glu Pro Gln Loeb et al., 2006
Tyrosine-protein kinase BAZ1B Q9UIG0 1-1483 Peptide-Asp832+Thr-Peptide N MS Pro Gln Val Asp Thr Glu Ala Glu Van Damme et al., 2010
Tyrosine-protein kinase BAZ1B Q9UIG0 1-1483 Peptide-Asp1328+Glu-Peptide N MS Ala Glu Val Asp Glu Leu Val Leu Van Damme et al., 2010
Tyrosine-protein phosphatase non-receptor type 2 P17706 1-145 Peptide-Asp339+Thr-Peptide N MS Lys Met Gln Asp Thr Met Glu Glu Van Damme et al., 2010
Tyrosyl-tRNA synthetase, cytoplasmic P54577 2-528 Peptide-Asp385+Ser-Peptide N MS Pro Asp Ala Asp Ser Leu Tyr Val Van Damme et al., 2010
U1 small nuclear ribonucleoprotein 70 kDa P08621 1-437 peptide-Asp409+Ser-peptide P Leu Gly Asn Asp Ser Arg Asp Met Casciola-Rosen et al., 1999 27177
U1 small nuclear ribonucleoprotein 70 kDa P08621 1-437 Peptide-Glu427+Asn-Peptide N MS Leu Ala Pro Glu Asn Gly Tyr Leu Van Damme et al., 2010
U1 small nuclear ribonucleoprotein 70 kDa P08621 1-437 peptide-Met316+Ala-peptide P MS Gly Gly Asp Met Ala Glu Pro Ser Van Damme et al., 2009
U11/U12 small nuclear ribonucleoprotein 48 kDa protein Q6IEG0 1-339 Peptide-Asp185+Ser-Peptide N MS Ile Glu Asn Asp Ser Asp Leu Phe Van Damme et al., 2010
U2 snRNP-associated SURP motif-containing protein O15042 1-1029 Peptide-Glu522+Ala-Peptide N MS Gln Glu Thr Glu Ala Phe Val Glu Van Damme et al., 2010
U3 small nucleolar RNA-associated protein 18 homolog Q9Y5J1 1-556 peptide-Asp98+Val-peptide P MS Val Phe Gly Asp Val Glu Asn Asp Van Damme et al., 2009 22281
U3 small nucleolar RNA-interacting protein 2 Q91WM3 1-475 peptide-Asp52+Ser-peptide N MS Ile Ser Ser Asp Ser Glu Ser Glu Van Damme et al., 2009 25925
U3 small nucleolar RNA-interacting protein 2 O43818 1-475 peptide-Lys25+Arg-peptide P MS Gly Ala Gly Lys Arg Arg Arg Lys Van Damme et al., 2009
U4/U6 small nuclear ribonucleoprotein Prp3 Q922U1 1-683 peptide-Asp98+Ser-peptide N MS Phe Gly Asp Asp Ser Glu Ile Ser Van Damme et al., 2009 22248
U4/U6 small nuclear ribonucleoprotein Prp3 O43395 1-683 Peptide-Asp97+Asp-Peptide N MS Val Phe Gly Asp Asp Ser Glu Ile Van Damme et al., 2010
U4/U6 small nuclear ribonucleoprotein Prp3 O43395 1-683 Peptide-Asp98+Ser-Peptide N MS Phe Gly Asp Asp Ser Glu Ile Ser Van Damme et al., 2010
U4/U6 small nuclear ribonucleoprotein Prp31 Q8WWY3 1-499 Peptide-Asp386+Ala-Peptide N MS Ile Glu Glu Asp Ala Tyr Gln Glu Van Damme et al., 2010
U4/U6 small nuclear ribonucleoprotein Prp4 O43172 1-522 peptide-Asp143+Ala-peptide P MS Val Gly Thr Asp Ala Leu Lys Lys Van Damme et al., 2009
U4/U6.U5 tri-snRNP-associated protein 1 O43290 1-800 Peptide-Asp154+Val-Peptide N MS Val Thr Ala Asp Val Ile Asn Pro Van Damme et al., 2010
U4/U6.U5 tri-snRNP-associated protein 1 O43290 1-800 Peptide-Asp421+Asp-Peptide N MS Val Arg Ala Asp Asp Leu Leu Pro Van Damme et al., 2010
U4/U6.U5 tri-snRNP-associated protein 1 O43290 1-800 Peptide-Glu230+Phe-Peptide N MS Met Asp Gln Glu Phe Gly Val Ser Van Damme et al., 2010
U4/U6.U5 tri-snRNP-associated protein 1 O43290 1-800 peptide-Ser234+Thr-peptide P MS Phe Gly Val Ser Thr Leu Val Glu Van Damme et al., 2009
U4/U6.U5 tri-snRNP-associated protein 1 O43290 1-800 peptide-Glu394+Glu-peptide P MS Leu Thr Pro Glu Glu Met Val Thr Van Damme et al., 2009
U5 small nuclear ribonucleoprotein 200 kDa helicase O75643 1-2136 Peptide-Asp2001+Ser-Peptide N MS Gln Leu Thr Asp Ser Gln Ile Ala Van Damme et al., 2010
U5 small nuclear ribonucleoprotein 200 kDa helicase O75643 1-2136 peptide-Asp390+Leu-peptide P MS Met Asp Thr Asp Leu Glu Thr Met Van Damme et al., 2009
U5 small nuclear ribonucleoprotein 200 kDa helicase O75643 1-2136 peptide-Asp941+Asp-peptide P MS Ile Ser His Asp Asp Leu Lys Gly Van Damme et al., 2009
U7 snRNA-associated Sm-like protein LSm11 P83369 1-360 Peptide-Asp29+Ser-Peptide N MS Val Ser Ser Asp Ser Phe Asp Pro Van Damme et al., 2010
ube2o ubiquitin-conjugating enzyme E2O Q6ZPJ3 1-1288 peptide-Asp474+Ala-peptide N MS Ala Glu Gln Asp Ala Asp Asp Glu Van Damme et al., 2009 25932
Ubiquitin carboxyl-terminal hydrolase 10 Q14694 1-798 Peptide-Glu133+Val-Peptide N MS Val Glu Ala Glu Val Leu Glu Asn Van Damme et al., 2010
Ubiquitin carboxyl-terminal hydrolase 10 Q14694 1-798 Peptide-Asp277+Thr-Peptide N MS Val Gly Thr Asp Thr Thr Glu Asn Van Damme et al., 2010
Ubiquitin carboxyl-terminal hydrolase 10 Q14694 1-798 Peptide-Asp62+Glu-Peptide N MS Phe Gly Val Asp Glu Val Ile Glu Plasman et al., 2011
Ubiquitin carboxyl-terminal hydrolase 10 Q14694 2-798 peptide-Asp249+Phe-peptide P MS Pro Gly Ala Asp Phe Gly Gln Ser Van Damme et al., 2009
Ubiquitin carboxyl-terminal hydrolase 14 P54578 1-494 peptide-Asp221+Ser-peptide P MS Ile Glu Asp Asp Ser Val Lys Glu Van Damme et al., 2009
Ubiquitin carboxyl-terminal hydrolase 14 P54578 1-494 peptide-Asp227+Ser-peptide P MS Lys Glu Thr Asp Ser Ser Ser Ala Van Damme et al., 2009
Ubiquitin carboxyl-terminal hydrolase 16 Q9Y5T5 1-823 Peptide-Asp543+Asn-Peptide N MS Ile Asn Met Asp Asn Asp Leu Glu Van Damme et al., 2010
Ubiquitin carboxyl-terminal hydrolase 47 Q96K76 1-1375 Peptide-Asp848+Ser-Peptide N MS Ala Gly Gly Asp Ser Gly Asn Val Van Damme et al., 2010
Ubiquitin carboxyl-terminal hydrolase 47 Q96K76 1-1375 peptide-Asp1012+Ser-peptide P MS Ala Glu Glu Asp Ser Gly Thr Asp Van Damme et al., 2009
Ubiquitin carboxyl-terminal hydrolase 8 P40818 1-1118 Peptide-Asp359+Glu-Peptide N MS Ile Glu Val Asp Glu Asn Ile Glu Van Damme et al., 2010
ubiquitin conjugation factor E4 B O95155 1-1302 peptide-Asp123+Ser-peptide N Val Asp Val Asp Ser Gly Ile Glu Mahoney et al., 2002 17213
Ubiquitin domain-containing protein UBFD1 Q78JW9 1-368 peptide-Glu96+Ala-peptide P MS Val Glu Ala Glu Ala Ala Val Gly Van Damme et al., 2009
ubiquitin interaction motif-containing protein 1 Q5U5Q9 1-727 peptide-Asp352+Met-peptide N MS Ile Ser Glu Asp Met Gly Asp Glu Van Damme et al., 2009 25928
Ubiquitin thioesterase OTUB1 Q96FW1 2-271 Peptide-Asp17+Ser-Peptide N MS Leu Gly Ser Asp Ser Glu Gly Val Van Damme et al., 2010
Ubiquitin thioesterase OTUB1 Q96FW1 2-271 Peptide-Asp27+Glu-Peptide N MS Leu Ala Tyr Asp Glu Ala Ile Met Van Damme et al., 2010
Ubiquitin-associated protein 2-like Q14157 1-1087 Peptide-Asp298+Ser-Peptide N MS Met Glu Asn Asp Ser Ser Asn Leu Van Damme et al., 2010
ubiquitin-conjugating enzyme E2 O Q6ZPJ3 1-1288 peptide-Asp36+Ser-peptide N MS Pro Ala Thr Asp Ser Ala Ser Gly Van Damme et al., 2009 25931
Ubiquitin-conjugating enzyme E2 O Q9C0C9 1-1292 Peptide-Asp41+Ser-Peptide N MS Pro Ala Ser Asp Ser Ala Ser Gly Van Damme et al., 2010
Ubiquitin-conjugating enzyme E2 O Q9C0C9 1-1292 Peptide-Glu779+Ala-Peptide N MS Ile Ser Glu Glu Ala Ala Thr Ala Van Damme et al., 2010
Ubiquitin-protein ligase E3A O08759 1-885 peptide-Glu414+Ser-peptide P MS Pro Ile Pro Glu Ser Ser Glu Leu Van Damme et al., 2009
ubiquitinyl hydrolase-UCH37 Q9WUP7 1-329 peptide-Asp251+Gln-peptide N MS Met Asp Thr Asp Gln Gly Ser Thr Van Damme et al., 2009 25927
UBX domain-containing protein 7 O94888 1-489 Peptide-Asp287+Ser-Peptide N MS Ala Ser Glu Asp Ser Gln Leu Glu Van Damme et al., 2010
Uncharacterized protein C12orf43 Q96C57 1-262 Peptide-Glu174+Ser-Peptide N MS Ile Leu Gln Glu Ser Ala Ile His Van Damme et al., 2010
Uncharacterized protein C14orf142 Q9BXV9 1-100 Peptide-Asp71+Asp-Peptide N MS Leu Asp Gly Asp Asp Glu Asp Asp Van Damme et al., 2010
Uncharacterized protein C17orf85 Q53F19 1-620 Peptide-Asp231+Thr-Peptide N MS Val Glu Leu Asp Thr Leu Ser Gln Van Damme et al., 2010
Uncharacterized protein C18orf25 Q96B23 1-403 Peptide-Asp48+Ser-Peptide N MS Gly Val Ala Asp Ser Thr Val Ile Van Damme et al., 2010
Uncharacterized protein C18orf25 Q96B23 1-403 Peptide-Asp65+Ser-Peptide N MS Leu Arg Arg Asp Ser Ser Glu Ser Van Damme et al., 2010
Uncharacterized protein C1orf131 Q8NDD1 1-294 Peptide-Asp30+Ala-Peptide N MS Thr Leu Leu Asp Ala Leu Leu Gln Van Damme et al., 2010
uncharacterized protein C1orf131 homolog Q8CIL4 1-281 peptide-Asp56+Val-peptide N MS Thr Ile Glu Asp Val Ala Val Glu Van Damme et al., 2009 25933
Uncharacterized protein C6orf130 Q9Y530 2-152 Peptide-Asp28+Ser-Peptide N MS Pro Lys Thr Asp Ser Leu Ala His Van Damme et al., 2010
Uncharacterized protein C9orf40 Q8IXQ3 1-194 Peptide-Asp174+Thr-Peptide N MS Leu Ser Glu Asp Thr Leu Thr Glu Van Damme et al., 2010
Uncharacterized protein C9orf78 Q9NZ63 1-289 Peptide-Asp177+Leu-Peptide N MS Pro Glu Val Asp Leu Gly Ile Asp Van Damme et al., 2010
Uncharacterized protein C9orf82 Q9H8G2 1-361 Peptide-Glu243+Leu-Peptide N MS Glu Gly Leu Glu Leu Lys Gln Gly Van Damme et al., 2010
Uncharacterized protein KIAA0586 Q9BVV6 1-1533 Peptide-Asp1024+Ala-Peptide N MS Val Ser Gly Asp Ala Ser Thr Asn Van Damme et al., 2010
unconventional prefoldin RPB5 interactor Q3TLD5 1-531 peptide-Asp419+Thr-peptide N MS Val Cys Ser Asp Thr Ser Glu Ser Van Damme et al., 2009 25692
UPF0485 protein C1orf144 Q7Z422 1-152 Peptide-Asp50+Ser-Peptide N MS Ile Gln Asp Asp Ser Leu Pro Ala Van Damme et al., 2010
UTP18, small subunit processome component Q5SSI6 1-552 peptide-Asp92+Val-peptide N MS Val Phe Gly Asp Val Glu Asp Asp Van Damme et al., 2009 22282
UTP18, small subunit processome component Q5SSI6 1-552 peptide-Asp139+Glu-peptide N MS Val Trp Val Asp Glu Asp Asp Glu Van Damme et al., 2009 25922
UTP18, small subunit processome component Q5SSI6 1-552 peptide-Asp141+Asp-peptide N MS Val Asp Glu Asp Asp Glu Asp Glu Van Damme et al., 2009 25923
UTP18, small subunit processome component Q5SSI6 1-552 peptide-Asp203+Asp-peptide N MS Thr Ser Ser Asp Asp Glu Ser Glu Van Damme et al., 2009 25924
UV excision repair protein RAD23 homolog A P54725 1-363 Peptide-Glu300+Val-Peptide N MS Val Glu Gly Glu Val Gly Ala Ile Van Damme et al., 2010
UV excision repair protein RAD23 homolog A P54725 1-363 peptide-Glu209+His-peptide P MS Pro Glu Pro Glu His Gly Ser Val Van Damme et al., 2009
UV excision repair protein RAD23 homolog A P54726 1-363 peptide-Glu300+Val-peptide P MS Val Glu Gly Glu Val Gly Ala Ile Van Damme et al., 2009
V-type proton ATPase subunit E 1 P36543 2-226 Peptide-Glu197+Ser-Peptide N MS Asn Thr Leu Glu Ser Arg Leu Asp Van Damme et al., 2010
Vacuolar protein sorting-associated protein 41 homolog P49754 1-854 Peptide-Asp320+Ala-Peptide N MS Ile Ser Ser Asp Ala Leu Thr Val Van Damme et al., 2010
Vacuolar protein sorting-associated protein 54 Q9P1Q0 1-977 Peptide-Asp430+Val-Peptide N MS Ile Asp Thr Asp Val Val Val Lys Van Damme et al., 2010
vacuolar protein sorting-associated protein VTA1 homolog Q9CR26 1-309 peptide-Asp255+Leu-peptide N MS Val Asp Pro Asp Leu Tyr Thr Ala Van Damme et al., 2009 25934
valine--tRNA ligase P26640 2-1264 Peptide-Asp491+Lys-Peptide N MS Ile Glu Val Asp Lys Lys Glu Leu Van Damme et al., 2010
Vesicle-fusing ATPase P46459 1-744 Peptide-Asp466+Met-Peptide N MS Val Glu Val Asp Met Glu Lys Ala Van Damme et al., 2010
Vigilin Q00341 2-1268 Peptide-Asp803+Ser-Peptide N MS Val Val Glu Asp Ser Met Leu Val Van Damme et al., 2010
vimentin P20152 2-466 peptide-Asp82+Ser-peptide N MS Leu Leu Gln Asp Ser Val Asp Phe Van Damme et al., 2009 25935
vimentin P08670 2-466 peptide-Asp259+Val-peptide P MS Ile Asp Val Asp Val Ser Lys Pro Van Damme et al., 2009 22283
Vimentin P08670 2-466 Peptide-Asp90+Ala-Peptide N MS Ser Leu Ala Asp Ala Ile Asn Thr Van Damme et al., 2010
Vimentin P08670 2-466 Peptide-Asp257+Val-Peptide N MS Val Gln Ile Asp Val Asp Val Ser Van Damme et al., 2010
Vimentin P08670 2-466 Peptide-Asp331+Ala-Peptide N MS Cys Glu Val Asp Ala Leu Lys Gly Van Damme et al., 2010
Vimentin P08670 2-466 peptide-Asp176+Asn-peptide P MS Val Glu Arg Asp Asn Leu Ala Glu Van Damme et al., 2009
Vimentin P20152 2-466 peptide-Asp259+Val-peptide P MS Ile Asp Val Asp Val Ser Lys Pro Van Damme et al., 2009
vitronectin P04004 20-478 peptide-Asp66+Val-peptide P Thr Arg Gly Asp Val Phe Thr Met Buzza et al., 2005 19681
Voltage-dependent L-type calcium channel subunit alpha-1C Q13936 1-2221 Peptide-Asp899+Thr-Peptide P CS Ile Val Asn Asp Thr Ile Phe Thr Gahring et al., 2001
Voltage-dependent L-type calcium channel subunit alpha-1C Q13936 1-2221 Peptide-Asp1437+Thr-Peptide P CS Ala Leu Asn Asp Thr Thr Glu Ile Gahring et al., 2001
Voltage-dependent T-type calcium channel subunit alpha-1H O95180 1-2353 Peptide-Asp444+Ser-Peptide P CS Leu Ser Asn Asp Ser Thr Leu Ala Gahring et al., 2001
WASH complex subunit CCDC53 Q9Y3C0 1-194 peptide-Glu125+Asn-peptide P MS Val Ser Ala Glu Asn Ile Leu Thr Van Damme et al., 2009
WD repeat and FYVE domain-containing protein 3 Q8IZQ1 1-3526 peptide-Asp2454+Ala-peptide P MS Ile Val Gln Asp Ala Ile Val Glu Van Damme et al., 2009
WD repeat and HMG-box DNA-binding protein 1 O75717 1-1129 peptide-Asp337+Phe-peptide P MS Asn Ala Gly Asp Phe Leu Asn Asp Van Damme et al., 2009
WD repeat-containing protein 3 Q9UNX4 1-943 Peptide-Asp742+Ser-Peptide N MS Thr Gln Gly Asp Ser Tyr Phe Thr Van Damme et al., 2010
WD repeat-containing protein 46 O15213 1-610 Peptide-Asp525+Val-Peptide N MS Ala Glu Val Asp Val Ile Ser Leu Van Damme et al., 2010
WD repeat-containing protein 52 Q96MT7 1-982 Peptide-Leu686+Ile-Peptide N MS Ile Leu Arg Leu Ile Glu Ile Glu Van Damme et al., 2010
WD repeat-containing protein 55 Q9CX97 1-388 peptide-Asp12+Ser-peptide N MS Pro Ala Glu Asp Ser Asn Asn Glu Van Damme et al., 2009 25936
WD repeat-containing protein 70 Q9NW82 1-654 Peptide-Asp528+Tyr-Peptide N MS Leu Thr Gln Asp Tyr Ile Ile Thr Van Damme et al., 2010
Werner syndrome ATP-dependent helicase Q14191 1-1432 Peptide-Asp1360+Ser-Peptide N MS His Gly Pro Asp Ser Gly Leu Gln Van Damme et al., 2010
X-ray repair cross-complementing protein 6 P12956 2-609 peptide-Asp79+Arg-peptide P Ile Ser Ser Asp Arg Asp Leu Leu Casciola-Rosen et al., 1999
X-ray repair cross-complementing protein 6 P12956 2-609 Peptide-Glu501+Gln-Peptide N MS Met Glu Pro Glu Gln Ala Val Asp Van Damme et al., 2010
YLP motif-containing protein 1 P49750 1-1951 Peptide-Asp1238+Ala-Peptide N MS Met Gly Ser Asp Ala Ser Leu Asp Van Damme et al., 2010
YTH domain family protein 3 Q7Z739 1-585 Peptide-Asp176+Thr-Peptide N MS Phe Gly Asn Asp Thr Leu Ser Lys Van Damme et al., 2010
YY1-associated protein 1 Q9H869 1-796 peptide-Asp410+Gln-peptide P MS Ile Asn Ser Asp Gln Gly Leu Glu Van Damme et al., 2009
Zinc finger and BTB domain-containing protein 7A O95365 1-584 Peptide-Asp135+Ala-Peptide N MS Leu Ala Ala Asp Ala Gly Ala Asp Van Damme et al., 2010
Zinc finger and BTB domain-containing protein 7A O95365 1-584 Peptide-Asp139+Ala-Peptide N MS Ala Gly Ala Asp Ala Gly Gln Leu Plasman et al., 2011
Zinc finger and SCAN domain-containing protein 21 Q07231 1-555 peptide-Glu259+Thr-peptide P MS Tyr Ile Gln Glu Thr Gly Glu Glu Van Damme et al., 2009
Zinc finger C3H1 domain-containing protein O60293 1-1989 Peptide-Asp280+Ser-Peptide N MS Ile Thr Lys Asp Ser Ser Lys Glu Van Damme et al., 2010
Zinc finger C3H1 domain-containing protein O60293 2-1989 peptide-Asp526+Asn-peptide P MS Tyr Gln Tyr Asp Asn Tyr Glu Glu Van Damme et al., 2009
Zinc finger CCCH domain-containing protein 11A O75152 1-810 Peptide-Asp711+Lys-Peptide N MS Val Ser Glu Asp Lys Ser Val Thr Van Damme et al., 2010
Zinc finger CCCH domain-containing protein 14 Q6PJT7 1-736 Peptide-Glu445+Thr-Peptide N MS Val Met Ala Glu Thr Leu Gln Met Van Damme et al., 2010
Zinc finger CCCH domain-containing protein 14 Q6PJT7 1-736 Peptide-Asp452+Tyr-Peptide N MS Met Ser Gln Asp Tyr Tyr Asp Met Van Damme et al., 2010
Zinc finger CCCH domain-containing protein 15 Q8WU90 1-426 Peptide-Asn330+Asp-Peptide N MS Val Ser Val Asn Asp Ile Asp Leu Van Damme et al., 2010
zinc finger CCCH domain-containing protein 18 Q0P678 1-948 peptide-Asp199+Asp-peptide N MS Ile Asp Asp Asp Asp Leu Glu Glu Van Damme et al., 2009 25893
Zinc finger CCCH domain-containing protein 18 Q86VM9 1-953 Peptide-Asp203+Asp-Peptide N MS Ile Asp Asp Asp Asp Leu Glu Glu Van Damme et al., 2010 25892
Zinc finger CCCH domain-containing protein 18 Q86VM9 1-953 peptide-Asp734+Leu-peptide P MS Met Tyr Ala Asp Leu Ala Ser Pro Van Damme et al., 2009
zinc finger CCCH domain-containing protein 4 Q6ZPZ3 1-1304 peptide-Asp67+Gly-peptide N MS Leu Glu Asp Asp Gly Ala Glu Glu Van Damme et al., 2009 25937
Zinc finger CCCH domain-containing protein 4 Q9UPT8 1-1303 Peptide-Asp300+Asp-Peptide N MS Pro Met Gly Asp Asp Asp Tyr Asp Van Damme et al., 2010
Zinc finger CCCH domain-containing protein 7A Q8IWR0 1-971 Peptide-Asp672+Ala-Peptide N MS Ile Ser His Asp Ala Ile Ala Gln Van Damme et al., 2010
zinc finger CCHC domain-containing protein 8 Q9CYA6 1-709 peptide-Asp516+Ala-peptide N MS Met Asp Glu Asp Ala Leu Thr Leu Van Damme et al., 2009 22288
zinc finger CCHC domain-containing protein 8 Q6NZY4 1-707 peptide-Asp513+Ala-peptide P MS Val Asp Glu Asp Ala Leu Thr Leu Van Damme et al., 2009 22287
Zinc finger FYVE domain-containing protein 19 Q9DAZ9 1-389 peptide-Glu237+Ala-peptide P MS Leu Leu Ala Glu Ala Ala Val Glu Van Damme et al., 2009
Zinc finger HIT domain-containing protein 2 Q9UHR6 1-403 Peptide-Asp150+Ala-Peptide N MS Pro Gly Ser Asp Ala Ala Glu Leu Van Damme et al., 2010
Zinc finger MYM-type protein 2 Q9UBW7 1-1377 Peptide-Asp179+Ser-Peptide N MS Thr Glu Pro Asp Ser Glu Ile Gln Van Damme et al., 2010
zinc finger protein 24 Q91VN1 1-368 peptide-Asp9+Ser-peptide N MS Val Glu Glu Asp Ser Ile Leu Ile Van Damme et al., 2009 25938
Zinc finger protein 316 A6NFI3 1-1004 Peptide-Asp80+Val-Peptide N MS Val Glu Ala Asp Val Glu Glu Glu Van Damme et al., 2010
Zinc finger protein 316 A6NFI3 1-1004 Peptide-Asp611+Ser-Peptide N MS Leu His Pro Asp Ser Phe Pro Ile Van Damme et al., 2010
Zinc finger protein 318 Q5VUA4 1-2279 Peptide-Asp602+Ile-Peptide N MS Ile Gly Leu Asp Ile Gly Val Ala Van Damme et al., 2010
Zinc finger protein 326 Q5BKZ1 1-582 Peptide-Asp486+Glu-Peptide N MS Ile Glu Gly Asp Glu Glu Asp Glu Van Damme et al., 2010
Zinc finger protein 330 Q9Y3S2 1-320 Peptide-Asp126+Ala-Peptide N MS Pro Leu Thr Asp Ala Glu Cys Val Van Damme et al., 2010
Zinc finger protein 414 Q96IQ9 1-312 Peptide-Asp73+Ser-Peptide N MS Pro Ala Pro Asp Ser Cys Gln Pro Van Damme et al., 2010
Zinc finger protein 609 O15014 1-1411 Peptide-Asn451+Ser-Peptide N MS Met Glu Leu Asn Ser Ser Ser Glu Van Damme et al., 2010
Zinc finger protein 609 O15014 1-1411 Peptide-Asp205+Thr-Peptide N MS Ala Gly Val Asp Thr Gly Ala Val Van Damme et al., 2010
Zinc finger protein 622 Q969S3 1-477 peptide-Asp126+Ala-peptide P MS Val Asp Lys Asp Ala Met Asn Ala Van Damme et al., 2009
Zinc finger protein 638 Q14966 1-1978 Peptide-Asp647+Thr-Peptide N MS Leu Glu Asp Asp Thr Leu Ser Glu Van Damme et al., 2010
Zinc finger protein 638 Q14966 1-1978 Peptide-Asn207+Val-Peptide N MS Val Ser Ser Asn Val Ile Asp Tyr Van Damme et al., 2010
Zinc finger protein 830 Q96NB3 1-372 peptide-Asp158+Tyr-peptide P MS Leu Leu Pro Asp Tyr Glu Asp Glu Van Damme et al., 2009
Zinc finger protein Pegasus Q9H5V7 1-419 Peptide-Asp225+Ser-Peptide N MS Ile Gln Thr Asp Ser Tyr Glu Ser Van Damme et al., 2010
zinc finger protein ubi-d4 Q61103 1-391 peptide-Asp161+Asp-peptide N MS Ile Glu Pro Asp Asp Phe Leu Asp Van Damme et al., 2009 25939
Zinc finger protein ubi-d4 Q92785 2-391 Peptide-Asp115+Gly-Peptide N MS Ile Ser Gln Asp Gly Ser Ser Leu Van Damme et al., 2010
Zinc finger protein ubi-d4 Q92785 2-391 Peptide-Asp141+Ser-Peptide N MS Val Asp Asp Asp Ser Leu Gly Glu Van Damme et al., 2010
Zinc finger protein ubi-d4 Q92785 2-391 Peptide-Asp101+Thr-Peptide N MS Ile Lys Pro Asp Thr Asp Gln Thr Van Damme et al., 2010
Zinc finger Ran-binding domain-containing protein 2 O95218 1-330 Peptide-Asp17+Lys-Peptide N MS Ile Cys Pro Asp Lys Lys Cys Gly Van Damme et al., 2010
Zinc finger Ran-binding domain-containing protein 2 O95218 1-330 Peptide-Asp186+Ala-Peptide N MS Tyr Asn Leu Asp Ala Ser Glu Glu Van Damme et al., 2010
Zinc finger Ran-binding domain-containing protein 2 O95218 1-330 Peptide-Asp192+Ser-Peptide N MS Glu Glu Glu Asp Ser Asn Lys Lys Van Damme et al., 2010
ZW10 interactor Q9CQU5 1-252 peptide-Asp83+Ala-peptide N MS Gln Ser Pro Asp Ala Leu Ala Ser Van Damme et al., 2009 25940
Zyxin Q15942 2-572 Peptide-Asp149+Ser-Peptide N MS Leu Glu Ile Asp Ser Leu Ser Ser Van Damme et al., 2010

feedback
Page created 8-September-2023

EMBL-EBI logo

© 2025 EBI
Terms of use