Substrates for peptidase C14.003: caspase-3

Summary Gene structure Alignment Tree Sequences Sequence features Distribution Structure Literature Substrates Pharma

Peptide and protein substrates that are thought to be physiologically relevant are indicated by P. Peptide and protein substrates that are thought to be pathologically relevant are indicated by D. Peptide and protein substrates that are not physiologically relevant are indicated by N. Synthetic substrates are indicated by S. Click on the symbol to show only physiological, non-physiological or synthetic substrates, or here to display all substrates. How cleavage sites have been identified are indicated by the following evidence codes: NT = N-terminal sequencing, MS = mass spectroscopy, MU = mutation, CS = consensus sequence, LC = liquid chromatography. To see all annotated cleavages for a protein substrate, click on the UniProt Accession.

Substrate	Uniprot	Residue range	Cleavage Site	Cleavage type	Evidence	P4	P3	P2	P1	P1'	P2'	P3'	P4'	Reference	CutDB
1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1	P19174	1-1290	peptide-Asp770+Tyr-peptide	P		Ala	Glu	Pro	Asp	Tyr	Gly	Ala	Leu	Bae et al., 2000	22705
14-3-3 protein epsilon	P62258	1-255	peptide-Asp238+Gly-peptide	P		Met	Gln	Gly	Asp	Gly	Glu	Glu	Gln	Won et al., 2003	19805
14-3-3 protein theta	P27348	1-245	peptide-Asp238+Ala-peptide	P		Glu	Glu	Cys	Asp	Ala	Ala	Glu	Gly	Nomura et al., 2003	19280
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	P62707	63-83	peptide-Asp75+Gln-peptide	N	MS	Asp	Glu	Leu	Asp	Gln	Ala	Trp	Leu	Biniossek et al., 2016
2-dehydro-3-deoxyphosphooctonate aldolase	P0A715	92-120	peptide-Asp110+Val-peptide	N	MS	Asp	Val	Val	Asp	Val	Ile	Gln	Leu	Biniossek et al., 2016
26S protease regulatory subunit 8	P62196	2-406	Ala-Leu-Asp4+Gly-Peptide	N	MS	-	Ala	Leu	Asp	Gly	Pro	Glu	Gln	Demon et al., 2009
26S proteasome non-ATPase regulatory subunit 12	O00232	2-456	peptide-Asp19+Tyr-peptide	P	MS	Met	Glu	Val	Asp	Tyr	Ser	Ala	Thr	Impens et al., 2010
28 kDa heat- and acid-stable phosphoprotein	Q13442	1-181	peptide-Asp24+Ala-peptide	P	MS	Glu	Glu	Ile	Asp	Ala	Gln	Leu	Gln	Impens et al., 2010
3,5-cyclic nucleotide phosphodiesterase 10A2, Isoform PDE10A2	Q9Y233-2	1-789	peptide-Asp315+Ile-peptide	P		Asp	Leu	Phe	Asp	Ile	Gly	Glu	Glu	Frame et al., 2001	18976
30S ribosomal protein S1	P0AG67	1-557	peptide-Asp69+Val-peptide	N	MS	Asp	Glu	Val	Asp	Val	Ala	Leu	Asp	Timmer et al., 2009
30S ribosomal protein S1	P0AG67	1-557	peptide-Asp462+Ala-peptide	N	MS	Thr	Ala	Val	Asp	Ala	Lys	Gly	Ala	Timmer et al., 2009
30S ribosomal protein S1	P0AG67	1-557	peptide-Asp39+Ala-peptide	N	MS	Val	Leu	Val	Asp	Ala	Gly	Leu	Lys	Timmer et al., 2009
30S ribosomal protein S1	P0AG67	201-226	peptide-Asp215+Gly-peptide	N	MS	Gly	Gly	Val	Asp	Gly	Leu	Leu	His	Biniossek et al., 2016
30S ribosomal protein S13	P0A7S9	4-13	peptide-Asp11+His-peptide	N	MS	Asn	Ile	Pro	Asp	His	Lys	His	Ala	Biniossek et al., 2016
30S ribosomal protein S18	P0A7T7	2-75	peptide-Asp22+Tyr-peptide	N	MS	Gln	Glu	Ile	Asp	Tyr	Lys	Asp	Ile	Timmer et al., 2009
30S ribosomal protein S18	P0A7T7	2-75	peptide-Asp25+Ile-peptide	N	MS	Asp	Tyr	Lys	Asp	Ile	Ala	Thr	Leu	Timmer et al., 2009
30S ribosomal protein S2	P0A7V0	2-241	peptide-Asp197+Phe-peptide	N	MS	Asp	Gly	Val	Asp	Phe	Val	Ile	Pro	Timmer et al., 2009
30S ribosomal protein S4	P0A7V8	2-206	peptide-Asp174+Ala-peptide	N	MS	Leu	Glu	Val	Asp	Ala	Gly	Lys	Met	Timmer et al., 2009
30S ribosomal protein S5	P0A7W1	2-167	peptide-Asp142+Gly-peptide	N	MS	Ala	Thr	Ile	Asp	Gly	Leu	Glu	Asn	Timmer et al., 2009
30S ribosomal protein S7	P02359	2-179	peptide-Asp33+Gly-peptide	N	MS	Leu	Met	Val	Asp	Gly	Lys	Lys	Ser	Timmer et al., 2009
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase	Q46938	112-125	peptide-Asp119+Thr-peptide	N	MS	Ala	Ser	Ile	Asp	Thr	Gly	Thr	Pro	Biniossek et al., 2016
50S ribosomal protein L2	P60422	2-273	peptide-Asp121+Ala-peptide	N	MS	Ser	Gly	Val	Asp	Ala	Ala	Ile	Lys	Timmer et al., 2009
50S ribosomal protein L21	P0AG48	1-103	peptide-Asp55+Gly-peptide	N	MS	Pro	Phe	Val	Asp	Gly	Gly	Val	Ile	Timmer et al., 2009
50S ribosomal protein L22	P61175	1-110	peptide-Asp62+Gly-peptide	N	MS	Glu	His	Asn	Asp	Gly	Ala	Asp	Ile	Timmer et al., 2009
50S ribosomal protein L5	P62399	146-148	peptide-Asp147+Arg-peptide	N	MS	Asp	Lys	Val	Asp	Arg	Val	Arg	Gly	Biniossek et al., 2016
50S ribosomal protein L9	P0A7R1	1-149	peptide-Asp101+Ala-peptide	N	MS	Asp	Ile	Ala	Asp	Ala	Val	Thr	Ala	Timmer et al., 2009
6-phosphogluconate dehydrogenase, decarboxylating	P00350	406-432	peptide-Tyr410+Ala-peptide	N	MS	Val	Val	Ala	Tyr	Ala	Val	Gln	Asn	Biniossek et al., 2016
60 kDa chaperonin	P0A6F5	2-548	peptide-Asp531+Leu-peptide	N	MS	Asp	Ala	Ala	Asp	Leu	Gly	Ala	Ala	Timmer et al., 2009
60 kDa chaperonin	P0A6F5	172-197	peptide-Asp188+Val-peptide	N	MS	Asp	Glu	Leu	Asp	Val	Val	Glu	Gly	Biniossek et al., 2016
60 kDa chaperonin	P0A6F5	453-470	peptide-Asn467+Thr-peptide	N	MS	Val	Val	Ala	Asn	Thr	Val	Lys	Gly	Biniossek et al., 2016
60 kDa heat shock protein, mitochondrial	P63038	27-573	Peptide-Asp531+Ala-Peptide	N	MS	Ala	Leu	Leu	Asp	Ala	Ala	Gly	Val	Demon et al., 2009
60 kDa heat shock protein, mitochondrial	P63038	27-573	Peptide-Asp203+Gly-Peptide	N	MS	Thr	Val	Lys	Asp	Gly	Lys	Thr	Leu	Demon et al., 2009
60 kDa heat shock protein, mitochondrial	P63038	27-573	Peptide-Asp279+Gly-Peptide	N	MS	Glu	Asp	Val	Asp	Gly	Glu	Ala	Leu	Demon et al., 2009
60S ribosomal protein L17	P18621	105-124	GLDVD+SLVIEHIQVNKAPK	N	MS	Leu	Asp	Val	Asp	Ser	Leu	Val	Ile	Schilling & Overall, 2008
60S ribosomal protein L5	P47962	2-297	Peptide-Asp136+Gly-Peptide	N	MS	Glu	Ser	Ile	Asp	Gly	Gln	Pro	Gly	Demon et al., 2009
85 kDa calcium-independent phospholipase A2 (EC 3.1.1.4)	O60733	1-806	peptide-Asp183+Tyr-peptide	P		Asp	Val	Thr	Asp	Tyr	Lys	Gly	Glu	Atsumi et al., 1998	19989
Ac-Asp-Glu-Val-Asp-NHMec			Ac-Asp-Glu-Val-Asp+NHMec	S		Asp	Glu	Val	Asp	AMC	-	-	-	Nicholson & Thornberry, 2004
aconitate hydratase, mitochondrial precursor	Q99798	573-587	WD+GKDLEDLQILIK	N	MS	-	-	Trp	Asp	Gly	Lys	Asp	Leu	Schilling & Overall, 2008
ACTA2 protein	Q13707	243-256	LPD+GQVITIGNER	N	MS	-	Leu	Pro	Asp	Gly	Gln	Val	Ile	Schilling & Overall, 2008
actin, alpha cardiac muscle 1	P68032	243-256	LPD+GQVITIGNER	N	MS	-	Leu	Pro	Asp	Gly	Gln	Val	Ile	Schilling & Overall, 2008
Actin, alpha cardiac muscle 1	P68032	3-377	peptide-Asp53+Ser-peptide	P	MS	Gly	Gln	Lys	Asp	Ser	Tyr	Val	Gly	Demon et al., 2009
Actin, alpha cardiac muscle 1	P68033	3-377	peptide-Asp246+Gly-peptide	P	MS	Glu	Leu	Pro	Asp	Gly	Gln	Val	Ile	Demon et al., 2009
actin, alpha skeletal muscle	P68133	243-256	LPD+GQVITIGNER	N	MS	-	Leu	Pro	Asp	Gly	Gln	Val	Ile	Schilling & Overall, 2008
Actin, alpha skeletal muscle	P68133	3-377	peptide-Asp53+Ser-peptide	P	MS	Gly	Gln	Lys	Asp	Ser	Tyr	Val	Gly	Demon et al., 2009
Actin, alpha skeletal muscle	P68134	3-377	peptide-Asp246+Gly-peptide	P	MS	Glu	Leu	Pro	Asp	Gly	Gln	Val	Ile	Demon et al., 2009
actin, aortic smooth muscle	P62736	243-256	LPD+GQVITIGNER	N	MS	-	Leu	Pro	Asp	Gly	Gln	Val	Ile	Schilling & Overall, 2008
Actin, aortic smooth muscle	P62737	3-377	Peptide-Asp246+Gly-Peptide	N	MS	Glu	Leu	Pro	Asp	Gly	Gln	Val	Ile	Demon et al., 2009
Actin, aortic smooth muscle	P62736	3-377	peptide-Asp53+Ser-peptide	P	MS	Gly	Gln	Lys	Asp	Ser	Tyr	Val	Gly	Demon et al., 2009
actin, cytoplasmic 1	P60709	2-375	peptide-Asp244+Gly-peptide	P		Glu	Leu	Pro	Asp	Gly	Gln	Val	Ile	Mashima et al., 1997	19295
Actin, cytoplasmic 1	P60710	1-375	Peptide-Asp11+Asn-Peptide	N	MS	Leu	Val	Val	Asp	Asn	Gly	Ser	Gly	Demon et al., 2009
Actin, cytoplasmic 1	P60709	1-375	peptide-Asp11+Asn-peptide	P	MS	Leu	Val	Val	Asp	Asn	Gly	Ser	Gly	Demon et al., 2009
Actin, cytoplasmic 1	P60709	1-375	peptide-Asp51+Ser-peptide	P	MS	Gly	Gln	Lys	Asp	Ser	Tyr	Val	Gly	Demon et al., 2009
Actin, cytoplasmic 1	P60710	1-375	peptide-Asp244+Gly-peptide	P	MS	Glu	Leu	Pro	Asp	Gly	Gln	Val	Ile	Demon et al., 2009
actin, cytoplasmic 2	P63261	241-254	LPD+GQVITIGNER	N	MS	-	Leu	Pro	Asp	Gly	Gln	Val	Ile	Schilling & Overall, 2008
Actin, cytoplasmic 2	P63261	1-375	peptide-Asp11+Asn-peptide	P	MS	Leu	Val	Ile	Asp	Asn	Gly	Ser	Gly	Impens et al., 2010
Actin, cytoplasmic 2	P63261	1-375	peptide-Asp51+Ser-peptide	P	MS	Gly	Gln	Lys	Asp	Ser	Tyr	Val	Gly	Impens et al., 2010
Actin, cytoplasmic 2	P63260	1-375	peptide-Asp11+Asn-peptide	P	MS	Leu	Val	Ile	Asp	Asn	Gly	Ser	Gly	Demon et al., 2009
Actin, cytoplasmic 2	P63260	1-375	peptide-Asp244+Gly-peptide	P	MS	Glu	Leu	Pro	Asp	Gly	Gln	Val	Ile	Demon et al., 2009
actin, gamma-enteric smooth muscle	P63267	242-255	LPD+GQVITIGNER	N	MS	-	Leu	Pro	Asp	Gly	Gln	Val	Ile	Schilling & Overall, 2008
Actin, gamma-enteric smooth muscle	P63267	3-376	peptide-Asp52+Ser-peptide	P	MS	Gly	Gln	Lys	Asp	Ser	Tyr	Val	Gly	Demon et al., 2009
Actin, gamma-enteric smooth muscle	P63268	3-376	peptide-Asp245+Gly-peptide	P	MS	Glu	Leu	Pro	Asp	Gly	Gln	Val	Ile	Demon et al., 2009
Actin-like protein 6A	O96019	2-429	peptide-Asp57+Gly-peptide	P	MS	Met	Glu	Ile	Asp	Gly	Asp	Lys	Gly	Impens et al., 2010
Actin-related protein 2/3 complex subunit 5	O15511	2-151	peptide-Asp29+Gly-peptide	P	MS	Asp	Glu	Glu	Asp	Gly	Gly	Asp	Gly	Impens et al., 2010
Actin-related protein 2/3 complex subunit 5	Q9CPW4	2-151	Peptide-Asp29+Gly-Peptide	N	MS	Asp	Glu	Glu	Asp	Gly	Gly	Asp	Gly	Demon et al., 2009
activator 1 140 kDa subunit	P35251	1-1148	peptide-Asp723+Gly-peptide	P		Asp	Glu	Val	Asp	Gly	Met	Ala	Gly	Rheaume et al., 1997	3797
activator 1 140 kDa subunit	P35251	1-1148	peptide-Asp922+Ser-peptide	P		Asp	Leu	Val	Asp	Ser	Gln	Ile	Arg	Rheaume et al., 1997	3798
activator 1 140 kDa subunit	P35251	1-1148	peptide-Asp1117+Ala-peptide	P		Ile	Glu	Thr	Asp	Ala	Met	Ile	Lys	Rheaume et al., 1997	3799
adenomatous polyposis coli protein	P25054	1-2843	peptide-Asp777+Ser-peptide	P		Asp	Asn	Ile	Asp	Asn	Leu	Ser	Pro	Webb et al., 1999
adenylosuccinate lyase	P0AB89	1-456	peptide-Asp379+His-peptide	N	MS	Asp	Glu	Leu	Asp	His	Asn	Trp	Glu	Timmer et al., 2009
aerobic respiration control protein arcA	P0A9Q1	1-238	peptide-Asp217+Thr-peptide	N	MS	Ser	Thr	Pro	Asp	Thr	Pro	Glu	Ile	Timmer et al., 2009
AKAP1 A-kinase anchor protein 1 precursor	Q92667	30-903	peptide-Asp582+Ser-peptide	P		Asp	Ser	Val	Asp	Ser	Cys	Cys	Ser	Yoo et al., 2008	21688
alkyl hydroperoxide reductase subunit C	P0AE08	2-187	peptide-Asp126+Pro-peptide	N	MS	Phe	Val	Val	Asp	Pro	Gln	Gly	Ile	Timmer et al., 2009
Alkyl hydroperoxide reductase subunit F	P35340	275-292	peptide-Asp286+Ser-peptide	N	MS	Asp	Val	Ile	Asp	Ser	Gln	Ser	Ala	Biniossek et al., 2016
alpha-adducin	P35611	1-737	peptide-Asp633+Ala-peptide	P		Asp	Asp	Ser	Asp	Ala	Ala	Thr	Phe	van de Water et al., 2000	19858
alpha-adducin	P35611	1-737	peptide-Asp29+Glu-peptide	P		Asp	Arg	Val	Asp	Glu	Asn	Asn	Pro	van de Water et al., 2000	3801
alpha-adducin	P35611	1-737	peptide-Asp208+Arg-peptide	P		Asp	Ile	Val	Asp	Arg	Gly	Ser	Thr	van de Water et al., 2000	3802
amyloid beta A4 protein	P05067	18-770	peptide-Asp739+Ala-peptide	P		Val	Glu	Val	Asp	Ala	Ala	Val	Thr	Gervais et al., 1999	3750
amyloid-like protein 1 precursor	P51693	39-650	peptide-Asp620+Pro-peptide	P		Val	Glu	Val	Asp	Pro	Met	Leu	Thr	Galvan et al., 2002	20197
androgen receptor	P10275	1-919	peptide-Asp155+Ser-peptide	P		Asp	Glu	Asp	Asp	Ser	Ala	Ala	Pro	Ellerby et al., 1999
AP-1 complex subunit beta-1	Q10567	1-949	peptide-Asp704+Leu-peptide	P		Asp	Leu	Phe	Asp	Leu	Thr	Ser	Gly	Santambrogio et al., 2005
apoptosis regulator BAX	Q07812	1-192	peptide-Asp33+Arg-peptide	P		Phe	Ile	Gln	Asp	Arg	Ala	Gly	Arg	Yanase et al., 2000
apoptosis regulator Bcl-2	Q9JJV8	1-236	peptide-Asp64+Met-peptide	N		Val	His	Arg	Asp	Met	Ala	Ala	Arg		16226
apoptosis regulator Bcl-2	P10415	1-239	peptide-Asp34+Val-peptide	N		Asp	Ala	Gly	Asp	Val	Gly	Ala	Ala	Cheng et al., 1997	3844
apoptotic chromatin condensation inducer in the nucleus	Q9UKV3	1-1341	peptide-Asp1093+Tyr-peptide	N		Asp	Glu	Leu	Asp	Tyr	His	Arg	Gly	Sahara et al., 1999	3849
apoptotic protease-activating factor 1	O14727	1-1248	peptide-Asp271+Ser-peptide	P		Ser	Val	Thr	Asp	Ser	Val	Met	Gly	Bratton et al., 2001	18970
apoptotic suppressor protein	Q9YQQ7	1-446	peptide-Asp94+Gly-peptide	P		Thr	Val	Thr	Asp	Gly	Gly	Gly	Ala	Jabbour et al., 2002
asparaginyl-tRNA synthetase	P0A8M0	2-466	peptide-Asp315+Ala-peptide	N	MS	Asp	Tyr	Thr	Asp	Ala	Val	Thr	Ile	Timmer et al., 2009
Aspartyl-tRNA synthetase, cytoplasmic	Q922B2	1-501	Peptide-Asp19+Ala-Peptide	N	MS	Glu	Ile	Val	Asp	Ala	Ala	Glu	Asp	Demon et al., 2009
ataxin-3	P54252	1-376	peptide-Asp145+Thr-peptide	P		Leu	Ile	Ser	Asp	Thr	Tyr	Leu	Ala	Ellerby et al., 1999
ataxin-3	P54252	1-376	peptide-Asp171+Cys-peptide	P		Asp	Leu	Pro	Asp	Cys	Glu	Ala	Asp	Ellerby et al., 1999
ataxin-3	P54252	1-376	peptide-Asp228+Leu-peptide	P		Asp	Glu	Glu	Asp	Leu	Gln	Arg	Ala	Ellerby et al., 1999
ATP synthase subunit alpha, mitochondrial	P25705	44-553	peptide-Asp159+Gly-peptide	P	MS	Asn	Ala	Ile	Asp	Gly	Lys	Gly	Pro	Impens et al., 2010
ATP-dependent Clp protease ATP-binding subunit clpX	P0A6H1	2-424	peptide-Asp404+Gly-peptide	N	MS	Ser	Val	Ile	Asp	Gly	Gln	Ser	Lys	Timmer et al., 2009
ATP-dependent Clp protease ATP-binding subunit ClpX	P0A6H1	179-188	peptide-Asp187+Lys-peptide	N	MS	Asp	Glu	Ile	Asp	Lys	Ile	Ser	Arg	Biniossek et al., 2016
ATP-dependent DNA helicase 2 subunit 2	P13010	97-125	peptide-Asp109+Ala-peptide	N	MS	Asp	Phe	Leu	Asp	Ala	Leu	Ile	Val	Schilling & Overall, 2008
ATP-dependent RNA helicase A	Q08211	1-1270	peptide-Asp167+Leu-peptide	P		Glu	Glu	Val	Asp	Leu	Asn	Ala	Gly	Myohanen et al., 2001	19876
ATP-dependent RNA helicase DDX1	Q92499	1-740	peptide-Asp685+Gly-peptide	P	MS	Asp	Glu	Phe	Asp	Gly	Lys	Val	Thr	Impens et al., 2010
ATP-dependent RNA helicase DDX1	Q91VR5	1-740	Peptide-Asp685+Gly-Peptide	N	MS	Asp	Glu	Phe	Asp	Gly	Lys	Val	Thr	Demon et al., 2009
ATP-dependent RNA helicase DDX1	Q91VR5	1-740	Peptide-Asp373+Gly-Peptide	N	MS	Asp	Glu	Ala	Asp	Gly	Leu	Leu	Ser	Demon et al., 2009
atrophin-1	P54259	1-1185	peptide-Asp109+Gly-peptide	P		Asp	Ser	Leu	Asp	Gly	Arg	Ser	Leu	Ellerby et al., 1999	3743
B-cell receptor-associated protein 31	P51572	159-182	peptide-Asp164+Gly-peptide	N	MS	Ala	Ala	Val	Asp	Gly	Gly	Lys	Leu	Schilling & Overall, 2008
baculoviral IAP repeat-containing protein 4	P98170	1-497	peptide-Asp242+Ala-peptide	P		Ser	Glu	Ser	Asp	Ala	Val	Ser	Ser	Deveraux et al., 1999	20025
baculoviral IAP repeat-containing protein 7	Q96CA5	1-298	peptide-Asp52+Gly-peptide	P		Asp	His	Val	Asp	Gly	Gln	Ile	Leu	Nachmias et al., 2003
BBF2H7/FUS protein	Q70T18	81-98	AAIDWFD+GKEFSGNPIK	N	MS	Asp	Trp	Phe	Asp	Gly	Lys	Glu	Phe	Schilling & Overall, 2008
Bcl-2-like protein 1	Q07817	1-233	peptide-Asp61+Ser-peptide	P		His	Leu	Ala	Asp	Ser	Pro	Ala	Val	Bellows et al., 2000
Bcl-2-like protein 1	Q07817	1-233	peptide-Asp76+Ala-peptide	P		Ser	Ser	Leu	Asp	Ala	Arg	Glu	Val	Bellows et al., 2000
Bcl-2-like protein 11	O43521	1-198	peptide-Asp13+Arg-peptide	P		Ser	Glu	Cys	Asp	Arg	Glu	Gly	Arg	Chen & Zhou, 2004	19951
Bcl2 antagonist of cell death (BAD)	Q92934	1-168	peptide-Asp14+Ser-peptide	P		Glu	Gln	Glu	Asp	Ser	Ser	Ser	Ala	Condorelli et al., 2001
Bcl2 antagonist of cell death (BAD)	Q61337	1-204	peptide-Asp61+Arg-peptide	P		Ser	Ala	Thr	Asp	Arg	Gly	Leu	Gly	Condorelli et al., 2001	20659
Bcl2 antagonist of cell death (BAD)	Q61337	1-204	peptide-Asp56+Ala-peptide	P		Glu	Gln	Glu	Asp	Ala	Ser	Ala	Thr	Condorelli et al., 2001	20658
Beta-actin-like protein 2	Q562R1	1-376	peptide-Asp245+Gly-peptide	P	MS	Glu	Leu	Pro	Asp	Gly	Gln	Val	Ile	Demon et al., 2009
Beta-actin-like protein 2	Q8BFZ3	1-376	peptide-Asp245+Gly-peptide	P	MS	Glu	Leu	Pro	Asp	Gly	Gln	Val	Ile	Demon et al., 2009
BH3-interacting domain death agonist	P55957	1-195	peptide-Asp50+Gly-peptide	P		Leu	Gln	Thr	Asp	Gly	Asn	Arg	Ser	Deqli Esposti et al., 2003
BH3-interacting domain death agonist	P55957	1-195	peptide-Asp75+Ser-peptide	P		Ile	Glu	Ala	Asp	Ser	Glu	Ser	Gln	Deqli Esposti et al., 2003
bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial	P13995	119-142	peptide-Asp127+Gly-peptide	N	MS	Asp	Asn	Val	Asp	Gly	Leu	Leu	Val	Schilling & Overall, 2008
bifunctional protein folC	P08192	1-422	peptide-Asp175+Trp-peptide	N	MS	Asp	His	Thr	Asp	Trp	Leu	Gly	Pro	Timmer et al., 2009
bifunctional protein NCOAT	O60502	1-916	peptide-Asp413+Gly-peptide	P		Ser	Val	Val	Asp	Gly	Thr	Pro	Leu	Butkinaree et al., 2008	21161
blooms syndrome protein	P54132	1-1417	peptide-Asp415+Phe-peptide	P		Thr	Glu	Val	Asp	Phe	Asn	Lys	Ser	Bischof et al. 2001	19875
blooms syndrome protein	P54132	1-1417	peptide-Asp436+Gly-peptide	P		Asp	Ser	Leu	Asp	Gly	Pro	Met	Glu	Freire et al., 2001	3742
breast cancer anti-estrogen resistance protein 1	P56945	1-870	peptide-Asp318+Gly-peptide	P		Asp	Val	Pro	Asp	Gly	Pro	Leu	Leu	Kook et al., 2000	3859
breast cancer anti-estrogen resistance protein 1	P56945	1-870	peptide-Asp650+Gly-peptide	P		Asp	Ser	Pro	Asp	Gly	Gln	Tyr	Glu	Kook et al., 2000	3860
breast cancer type 1 susceptibility protein	P38398	1-1863	peptide-Asp1155+Asp-peptide	P		Asp	Leu	Leu	Asp	Asp	Gly	Glu	Ile	Zhan et al., 2002	3779
breast cancer type 1 susceptibility protein	P38398	1-1863	peptide-Asp414+Val-peptide	P		Asp	Val	Leu	Asp	Val	Leu	Asn	Glu	Zhan et al., 2002
C-Jun-amino-terminal kinase-interacting protein 1	Q9UQF2	1-711	peptide-Asp98+Ala-peptide	P	MU	Asp	Leu	Ile	Asp	Ala	Thr	Gly	Asp	Vaishnav et al., 2011
C-Jun-amino-terminal kinase-interacting protein 1	Q9UQF2	1-711	peptide-Asp408+Ser-peptide	P	MU	Asp	Glu	Ser	Asp	Ser	Ala	Thr	Val	Vaishnav et al., 2011
C-Rel proto-oncogene protein	P16236	1-598	peptide-Asp85+Gly-peptide	P		Asp	Cys	Arg	Asp	Gly	Tyr	Tyr	Glu	Barkett et al., 2001
C-Rel proto-oncogene protein	P16236	1-598	peptide-Asp432+Ser-peptide	P		Asp	Glu	Lys	Asp	Ser	Ser	Phe	Tyr	Barkett et al., 2001
CAD protein	P27708	2-2225	peptide-Asp1371+Gly-peptide	P		Glu	Ala	Val	Asp	Gly	Glu	Cys	Pro	Adam-Klages et al., 1998	3826
CAD protein	P27708	2-2225	peptide-Asp1143+Gly-peptide	P		Val	Ala	Ser	Asp	Gly	Val	Val	Ala	Adam-Klages et al., 1998	3825
calcium/calmodulin-dependent protein kinase type IV	Q16566	1-473	peptide-Asp35+Gly-peptide	P		Tyr	Trp	Ile	Asp	Gly	Ser	Asn	Arg	McGinnis et al., 1998
calcium/calmodulin-dependent protein kinase type IV	P08414	1-469	peptide-Asp174+Ala-peptide	P		Pro	Ala	Pro	Asp	Ala	Pro	Leu	Lys	McGinnis et al., 1998	19363
calcium/calmodulin-dependent protein kinase type IV	P08414	1-469	peptide-Asp31+Gly-peptide	P		Tyr	Trp	Ile	Asp	Gly	Ser	Asn	Arg	McGinnis et al., 1998	19362
calnexin	P35564	21-591	peptide-Asp568+Ser-peptide	P		Asp	Glu	Glu	Asp	Ser	Lys	Pro	Lys	Takizawa et al., 2004	19285
calpastatin	P20810	1-708	peptide-Asp238+Phe-peptide	P		Leu	Ser	Ser	Asp	Phe	Thr	Cys	Gly	Wang et al., 1998
Calpastatin	P20810	1-708	peptide-Asp159+Leu-peptide	P	CS	Ala	Leu	Asp	Asp	Leu	Ile	Asp	Thr	Ju et al., 2007	20656
Calpastatin	P20810	1-708	peptide-Asp233+Ala-peptide	P	CS	Asp	Ala	Ile	Asp	Ala	Leu	Ser	Ser	Ju et al., 2007
Calponin-2	Q99439	2-309	peptide-Asp141+Ile-peptide	P	MS	Ser	Gly	Val	Asp	Ile	Gly	Val	Lys	Impens et al., 2010
calsenilin	Q9Y2W7	1-256	peptide-Asp64+Ser-peptide	P		Asp	Ser	Ser	Asp	Ser	Glu	Leu	Glu	Choi et al., 2001	20775
cAMP-dependent protein kinase type II-alpha regulatory subunit	P12367	2-401	Peptide-Asp30+Phe-Peptide	N	MS	Asp	Leu	Val	Asp	Phe	Ala	Val	Glu	Demon et al., 2009
cAMP-specific 3',5'-cyclic phosphodiesterase 4A	P54748	1-844	peptide-Asp72+Thr-peptide	P		Asp	Ala	Val	Asp	Thr	Gly	Asp	Arg	Huston et al., 2000	20013
carbamoyl-phosphate synthase small chain	P0A6F1	1-382	peptide-Asp139+Ala-peptide	N	MS	Asp	Asn	Pro	Asp	Ala	Ala	Leu	Ala	Timmer et al., 2009
carcinoembryonic antigen-related cell adhesion molecule 1 isoform 1	P31809	35-521	peptide-Asp460+Leu-peptide	P		Asp	Gln	Arg	Asp	Leu	Thr	Glu	His	Houde et al., 2003	20741
caspase-3 precursor	P42574	1-277	peptide-Asp28+Ser-peptide	P		Glu	Ser	Met	Asp	Ser	Gly	Ile	Ser	Meergans et al., 2001	18055
caspase-3 precursor	P42574	1-277	peptide-Asp9+Ser-peptide	P		Asn	Ser	Val	Asp	Ser	Lys	Ser	Ile	Kamada et al., 1997
caspase-3 precursor	P42574	1-277	peptide-Asp175+Ser-peptide	P		Ile	Glu	Thr	Asp	Ser	Gly	Val	Asp	Kamada et al., 1997
caspase-6 precursor	P55212	1-293	peptide-Asp23+Ala-peptide	P		Thr	Glu	Thr	Asp	Ala	Phe	Tyr	Lys	Srinivasula et al., 1996	3821
caspase-6 precursor	P55212	1-293	peptide-Asp179+Ala-peptide	P		Asp	Val	Val	Asp	Asn	Gln	Thr	Glu	Srinivasula et al., 1996	3822
caspase-6 precursor	P55212	1-293	peptide-Asp179+Ala-peptide	P		Thr	Glu	Val	Asp	Ala	Ala	Ser	Val	Srinivasula et al., 1996	3823
caspase-9 precursor	P55211	1-416	peptide-Asp330+Ala-peptide	P		Asp	Gln	Leu	Asp	Ala	Ile	Ser	Ser	Srinivasula et al., 1996	3755
catenin beta-1 (Beta-catenin)	P35222	1-781	peptide-Asp32+Ser-peptide	P		Ser	Tyr	Leu	Asp	Ser	Gly	Ile	His	Steinhusen et al., 2000	18887
catenin beta-1 (Beta-catenin)	P35222	1-781	peptide-Asp83+Gly-peptide	P		Ala	Asp	Ile	Asp	Gly	Gln	Tyr	Ala	Steinhusen et al., 2000	18888
catenin beta-1 (Beta-catenin)	P35222	1-781	peptide-Asp115+Ala-peptide	P		Thr	Gln	Phe	Asp	Ala	Ala	His	Pro	Steinhusen et al., 2000	18889
catenin beta-1 (Beta-catenin)	P35222	1-781	peptide-Asp751+Gly-peptide	P		Tyr	Pro	Val	Asp	Gly	Leu	Pro	Asp	Steinhusen et al., 2000	18890
catenin beta-1 (Beta-catenin)	P35222	1-781	peptide-Asp764+Gly-peptide	P		Asp	Leu	Met	Asp	Gly	Leu	Pro	Pro	Steinhusen et al., 2000	18891
CCNE1	P24864	1-410	peptide-Asp290+Cys-peptide	P		Leu	Asp	Val	Asp	Cys	Leu	Glu	Phe	Mazumder et al., 2002	19198
CDKN1B	Q6I9V6	1-198	peptide-Asp139+Ser-peptide	P		Asp	Pro	Ser	Asp	Ser	Gln	Thr	Gly	Frost et al., 2001	19304
CDKN1B	Q6I9V6	1-198	peptide-Asp108+Val-peptide	P		Glu	Ser	Gln	Asp	Val	Ser	Gly	Ser	Eymin et al., 1999	19305
cDNA FLJ45706 fis, clone FEBRA2028457, highly similar to Nucleolin	Q6ZS99	520-541	peptide-Asp529+Gly-peptide	N	MS	Gly	Glu	Ile	Asp	Gly	Asn	Lys	Val	Schilling & Overall, 2008
cDNA FLJ77456, highly similar to Homo sapiens interleukin enhancer binding factor 3, 90kDa	A8K590	419-451	peptide-Asp439+Gly-peptide	N	MS	Val	Glu	Val	Asp	Gly	Asn	Ser	Phe	Schilling & Overall, 2008
cDNA FLJ77456, highly similar to Homo sapiens interleukin enhancer binding factor 3, 90kDa	A8K590	554-573	FVMEVEVD+GQKFQGAGSNK	N	MS	Val	Glu	Val	Asp	Gly	Gln	Lys	Phe	Schilling & Overall, 2008
cDNA, FLJ95457, highly similar to Homo sapiens tubulin, beta, 4	B2RBD5	103-122	GHYTEGAELVD+SVLDVVRK	N	MS	Glu	Leu	Val	Asp	Ser	Val	Leu	Asp	Schilling & Overall, 2008
cell division control protein 42 homolog	P60953	1-188	peptide-Asp121+Asp-peptide	P		Asp	Leu	Arg	Asp	Asp	Pro	Ser	Thr	Danley et al., 1996	3862
cell division control protein 6 homolog	Q99741	1-560	peptide-Asp99+Asn-peptide	P		Leu	Val	Phe	Asp	Asn	Gln	Leu	Thr	Pelizon et al., 2002
cell division control protein 6 homolog	Q99741	1-560	peptide-Asp442+Gly-peptide	P		Ser	Glu	Val	Asp	Gly	Asn	Arg	Met	Pelizon et al., 2002	19464
cellular tumor antigen p53	P04637	1-393	peptide-Asp21+Leu-peptide	P		Thr	Phe	Ser	Asp	Leu	Trp	Lys	Leu	Sayan et al., 2006	19696
cellular tumor antigen p53	P04637	1-393	peptide-Asp186+Gly-peptide	P		Ser	Asp	Ser	Asp	Gly	Leu	Ala	Pro	Sayan et al., 2006	19697
chaperone protein dnaK	P0A6Y8	2-638	peptide-Asp628+Ala-peptide	N	MS	Asp	Val	Val	Asp	Ala	Glu	Phe	Glu	Timmer et al., 2009
chaperone protein dnaK	P0A6Y8	2-638	peptide-Asp211+Gly-peptide	N	MS	Asp	Glu	Val	Asp	Gly	Glu	Lys	Thr	Timmer et al., 2009
chaperone protein htpG	P0A6Z3	1-624	peptide-Asp498+Glu-peptide	N	MS	Asp	Glu	Val	Asp	Glu	Ser	Ala	Lys	Timmer et al., 2009
chaperone surA	P0ABZ6	21-428	peptide-Asp43+Gly-peptide	N	MS	Ser	Asp	Val	Asp	Gly	Leu	Met	Gln	Timmer et al., 2009
Cingulin	Q9P2M7	1-1197	peptide-Asp173+Ser-peptide	P	MS	Ser	Ser	Val	Asp	Ser	Leu	Ile	Asn	Impens et al., 2010
claspin	Q9HAW4	1-339	peptide-Asp25+Ser-peptide	P		Glu	Glu	Ala	Asp	Ser	Pro	Ser	Asp	Semple et al., 2007	19839
Clathrin light chain A	P09496	1-248	peptide-Asp76+Gly-peptide	P	MS	Asp	Ala	Val	Asp	Gly	Val	Met	Asn	Impens et al., 2010
Clathrin light chain A	O08585	1-235	Peptide-Asp75+Gly-Peptide	N	MS	Asp	Ala	Val	Asp	Gly	Val	Met	Asn	Demon et al., 2009
cleavage and polyadenylation specificity factor subunit 2	Q9P2I0	105-130	peptide-Asp120+Ala-peptide	N	MS	Asp	Asp	Val	Asp	Ala	Ala	Phe	Asp	Schilling & Overall, 2008
CLiPS synthetic peptide			peptide-Asp+Gly-peptide	S		Asp	Glu	Val	Asp	Gly	Gly	Gln	Ser	Boulware & Daugherty, 2006
CLiPS synthetic peptide			peptide-Asp+Gly-peptide	S		Asp	Gly	Val	Asp	Gly	Trp	Gly	Gly	Boulware & Daugherty, 2006
CLiPS synthetic peptide			peptide-Asp+Gly-peptide	S		Asp	Val	Val	Asp	Gly	Trp	Gly	Gly	Boulware & Daugherty, 2006
CLiPS synthetic peptide			peptide-Asp+Gly-peptide	S		Asp	Gly	Val	Asp	Gly	Val	Gly	Gly	Boulware & Daugherty, 2006
CLiPS synthetic peptide			peptide-Asp+Thr-peptide	S		Gly	Ser	Leu	Asp	Thr	Trp	Thr	Ala	Boulware & Daugherty, 2006
CLiPS synthetic peptide			peptide-Asp+Arg-peptide	S		Asp	Thr	Val	Asp	Arg	Gly	Gly	Gln	Boulware & Daugherty, 2006
CLiPS synthetic peptide			peptide-Asp+Ser-peptide	S		Asp	Ser	Thr	Asp	Ser	Gly	Gly	Gly	Boulware & Daugherty, 2006
CLiPS synthetic peptide			peptide-Asp+Gly-peptide	S		Ser	Gln	Val	Asp	Gly	Val	Gly	Gly	Boulware & Daugherty, 2006
CLiPS synthetic peptide			peptide-Asp+Gly-peptide	S		Ser	Glu	Val	Asp	Gly	Arg	His	Gly	Boulware & Daugherty, 2006
CLiPS synthetic peptide			peptide-Asp+Gly-peptide	S		Thr	Glu	Val	Asp	Gly	Pro	Gly	Gly	Boulware & Daugherty, 2006
CLiPS synthetic peptide			peptide-Asp+Gly-peptide	S		Ser	Glu	Val	Asp	Gly	Gly	Trp	Gly	Boulware & Daugherty, 2006
CLiPS synthetic peptide			peptide-Asp+Gly-peptide	S		Asp	Gly	Thr	Asp	Gly	Gly	Gly	Gln	Boulware & Daugherty, 2006
CLiPS synthetic peptide			peptide-Asp+Thr-peptide	S		Asp	Gly	Val	Asp	Thr	Gly	Gly	Gln	Boulware & Daugherty, 2006
CLiPS synthetic peptide			peptide-Asp+Gly-peptide	S		Ser	Glu	Val	Asp	Gly	Ser	Arg	Gly	Boulware & Daugherty, 2006
CLiPS synthetic peptide			peptide-Asp+Gly-peptide	S		Ser	Tyr	Val	Asp	Gly	Val	Val	Gly	Boulware & Daugherty, 2006
CLiPS synthetic peptide			peptide-Asp+Arg-peptide	S		Asp	Phe	Val	Asp	Arg	Val	Gly	Gly	Boulware & Daugherty, 2006
CLiPS synthetic peptide			peptide-Asp+Gly-peptide	S		Ser	Met	Val	Asp	Gly	Ala	Met	Gly	Boulware & Daugherty, 2006
Coiled-coil domain-containing protein 137	Q8R0K4	1-290	Peptide-Asp108+Ile-Peptide	N	MS	Glu	Glu	Pro	Asp	Ile	Ala	Val	Pro	Demon et al., 2009
consensus-aspartyl bond			peptide-Asp+peptide	N		Asp	Xaa	Xaa	Asp	CPe	-	-	-	Nicholson & Thornberry, 2004
COP9 signalosome complex subunit 6	Q7L5N1	1-327	peptide-Asp23+Ala-peptide	P	MU	Met	Glu	Val	Asp	Ala	Ala	Val	Val	Hetfield et al., 2008
coproporphyrinogen III oxidase, mitochondrial precursor	P36551	332-352	GIGGIFFDDLD+SPSKEEVFR	N	MS	Asp	Asp	Leu	Asp	Ser	Pro	Ser	Lys	Schilling & Overall, 2008
Craniofacial development protein 1	Q9UEE9	1-299	peptide-Asp40+Gly-peptide	P	MS	Asp	Glu	Val	Asp	Gly	Glu	Glu	Gln	Impens et al., 2010
Craniofacial development protein 1	O88271	1-295	Peptide-Asp40+Gly-Peptide	N	MS	Asp	Glu	Val	Asp	Gly	Glu	Glu	Gln	Demon et al., 2009
CtBP-interacting BTB zinc finger protein	Q3LR78	1-1197	peptide-Asp618+Gly-peptide	P		Asp	Phe	Gln	Asp	Gly	Arg	Asn	Thr	Oikawa et al., 2008	20703
CtBP-interacting BTB zinc finger protein	Q3LR78	1-1197	peptide-Asp910+Lys-peptide	P		Asp	Ser	Thr	Asp	Lys	Pro	Trp	Arg	Oikawa et al., 2008	20704
cyclin-dependent kinase inhibitor 1	P38936	2-164	peptide-Asp149+Phe-peptide	P		Ser	Met	Thr	Asp	Phe	Tyr	His	Ser	Park et al., 1998	3796
cyclin-dependent kinase inhibitor 1	P38936	2-164	peptide-Asp112+Leu-peptide	P		Asp	His	Val	Asp	Leu	Ser	Leu	Ser	Park et al., 1998	3763
cytoplasmic dynein intermediate chain	Q98SV2	1-607	peptide-Asp69+Gly-peptide	P		Asp	Ser	Gly	Asp	Gly	Ala	Gly	Gly	Lane et al., 2001	19434
cytoplasmic tyrosine-protein kinase BMX	P51813	1-675	peptide-Asp242+Trp-peptide	P		Asp	Phe	Pro	Asp	Trp	Trp	Gln	Val	Wu et al., 2001	18969
cytosolic phospholipase A2	P47712	1-749	peptide-Asp522+Ala-peptide	P		Asp	Glu	Leu	Asp	Ala	Ala	Val	Ala	Adam-Klages et al., 1998	21379
Cytosolic phospholipase A2	P47713	1-748	Peptide-Asp521+Ala-Peptide	N	MS	Asp	Glu	Leu	Asp	Ala	Ala	Val	Ala	Demon et al., 2009	18894
D-tagatose-1,6-bisphosphate aldolase subunit gatY	P0C8J6	1-284	peptide-Asp151+Ala-peptide	N	MS	Asn	Glu	Ala	Asp	Ala	Leu	Tyr	Thr	Timmer et al., 2009
DBN1 drebrin 1	Q16643	2-649	peptide-Asp167+Ala-peptide	P	MS	Gln	Lys	Thr	Asp	Ala	Ala	Val	Glu	Impens et al., 2010
Deoxyribose-phosphate aldolase	P0A6L0	70-91	peptide-Asp84+Ile-peptide	N	MS	Asp	Asp	Ile	Asp	Ile	Ala	Leu	Ala	Biniossek et al., 2016
Desmoglein-1	Q02413	50-1049	peptide-Asp888+Gly-peptide	P		Asp	Leu	Arg	Asp	Gly	Ser	Asn	Val	Dusek et al., 2006	19687
desmoglein-3	P32926	50-999	peptide-Asp781+Gly-peptide	P		Asp	Tyr	Ala	Asp	Gly	Ala	Ile	Ser	Weiske et al., 2001	3832
DFFA	Q8C535	1-265	peptide-Asp224+Thr-peptide	P		Asp	Ala	Val	Asp	Thr	Gly	Val	Gly	Sakahira et al., 1998	19352
dihydrolipoyl dehydrogenase	P0A9P0	2-474	peptide-Asp394+Gly-peptide	N	MS	Asp	Cys	Ala	Asp	Gly	Met	Thr	Lys	Timmer et al., 2009
dihydrolipoyl dehydrogenase	P0A9P0	2-474	peptide-Asp167+Ala-peptide	N	MS	Asp	Ser	Thr	Asp	Ala	Leu	Glu	Leu	Timmer et al., 2009
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex	P06959	493-512	peptide-Asn504+Gly-peptide	N	MS	Asp	Thr	Pro	Asn	Gly	Leu	Val	Val	Biniossek et al., 2016
dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	P10515	87-647	peptide-Asp131+Lys-peptide	P		Val	Glu	Thr	Asp	Lys	Ala	Thr	Val	Matsumura et al., 2002	19911
dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	P10515	87-647	peptide-Asp258+Lys-peptide	P		Ile	Glu	Thr	Asp	Lys	Ala	Thr	Ile	Matsumura et al., 2002
dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex	P0AFG6	2-405	peptide-Asp128+Ala-peptide	N	MS	His	Asn	Leu	Asp	Ala	Ser	Ala	Ile	Timmer et al., 2009
Dipeptidyl carboxypeptidase	P24171	561-579	peptide-Ala569+Met-peptide	N	MS	Glu	Asn	Glu	Ala	Met	Gln	Asp	Val	Biniossek et al., 2016
Diphthamide biosynthesis protein 2	Q9BQC3	1-489	peptide-Asp253+Thr-peptide	P	MS	Cys	Cys	Pro	Asp	Thr	Gly	Lys	Thr	Impens et al., 2010
Disco-interacting protein 2 homolog B	Q9P265	1-1576	peptide-Asp60+Ser-peptide	P	MS	Gln	Glu	Thr	Asp	Ser	Ala	Val	Gln	Impens et al., 2010
disks large homolog 1	Q12959	1-904	peptide-Asp428+Asn-peptide	P		Gln	Pro	Val	Asp	Asn	His	Val	Ser	Gregorc et al., 2005	19864
Disks large-associated protein 4	Q9Y2H0	1-992	peptide-Asp720+Ala-peptide	P	MS	Asp	Thr	Gln	Asp	Ala	Asn	Asp	Ser	Impens et al., 2010
DNA fragmentation factor subunit alpha	O00273	1-331	peptide-Asp224+Thr-peptide	P		Asp	Ala	Val	Asp	Thr	Gly	Ile	Ser	Liu et al., 1997	17863
DNA fragmentation factor subunit alpha	O00273	1-331	peptide-Asp117+Ser-peptide	P		Asp	Glu	Thr	Asp	Ser	Gly	Ala	Gly	Liu et al., 1997	17862
DNA fragmentation factor subunit alpha	O54786	1-331	peptide-Asp117+Ser-peptide	P		Asp	Glu	Pro	Asp	Ser	Arg	Ala	Gly	Sakahira et al., 1998	19353
DNA fragmentation factor subunit alpha	O54786	1-331	peptide-Asp224+Thr-peptide	P		Asp	Ala	Val	Asp	Thr	Gly	Val	Gly	Sakahira et al., 1998	19351
DNA gyrase subunit A	P0AES4	100-121	peptide-Asp104+Gly-peptide	N	MS	Met	Leu	Val	Asp	Gly	Gln	Gly	Asn	Biniossek et al., 2016
DNA gyrase subunit A	P0AES4	839-1	peptide-Asp852+Gly-peptide	N	MS	Asp	Thr	Ile	Asp	Gly	Ser	Ala	Ala	Biniossek et al., 2016
DNA mismatch repair protein Mlh1	P40692	1-756	peptide-Asp418+Ile-peptide	P		Asp	Lys	Thr	Asp	Ile	Ser	Ser	Gly	Chen et al., 2004	18963
DNA polymerase epsilon, catalytic subunit A	Q07864	1-2286	peptide-Asp216+Asn-peptide	P		Asp	Gln	Leu	Asp	Asn	Ile	Val	Asp	Liu & Linn, 2000	19399
DNA polymerase epsilon, catalytic subunit A	Q07864	1-2286	peptide-Asp1214+Phe-peptide	P		Asp	Met	Glu	Asp	Phe	Gly	Leu	Val	Liu & Linn, 2000	19400
DNA repair protein RAD51 homolog 1	Q06609	1-339	peptide-Asp187+Asn-peptide	P		Asp	Val	Leu	Asp	Asn	Val	Ala	Tyr	Huang et al., 1999	3762
DNA repair protein RAD51 homolog 1	Q06609	1-339	Peptide-Asp274+Gly-Peptide	P	MU	Ala	Gln	Val	Asp	Gly	Ala	Ala	Met	Flygare et al., 2000
DNA replication licensing factor MCM5	P33992	1-734	peptide-Asp13+Ser-peptide	P	MS	Phe	Tyr	Ser	Asp	Ser	Phe	Gly	Gly	Impens et al., 2010
DNA topoisomerase 1	P11387	1-765	peptide-Asp146+Tyr-peptide	P		Asp	Asp	Ala	Asp	Tyr	Lys	Pro	Lys	Samejima et al., 1999	3764
DNA topoisomerase 1	P11387	1-765	peptide-Asp170+Gly-peptide	P		Glu	Glu	Glu	Asp	Gly	Lys	Leu	Lys	Samejima et al., 1999
DNA topoisomerase 1	P11387	2-765	peptide-Asp123+Gly-peptide	P	CS	Pro	Glu	Asp	Asp	Gly	Tyr	Phe	Val	Ju et al., 2007
DNA-dependent protein kinase catalytic subunit	P78527	1-4128	peptide-Asp2713+Asn-peptide	P		Asp	Glu	Val	Asp	Asn	Lys	Val	Lys	Song et al., 1996	16230
DNA-dependent protein kinase catalytic subunit	P78527	1-4128	peptide-Asp2020+Gly-peptide	P		Gly	Asp	Ser	Asp	Gly	Pro	Ser	Tyr	Teraoka et al., 1996	3739
dNA-directed RNA polymerase subunit beta	P0A8T7	1-1407	peptide-Asp891+Phe-peptide	N	MS	Cys	Asp	Thr	Asp	Phe	Gly	Val	Cys	Timmer et al., 2009
DNA-directed RNA polymerase subunit beta	P0A8V2	648-678	peptide-Asp654+Val-peptide	N	MS	Asp	Tyr	Met	Asp	Val	Ser	Thr	Gln	Biniossek et al., 2016
DNA-repair protein XRCC4	Q13426	1-336	peptide-Asp265+Ile-peptide	P		Asp	Val	Thr	Asp	Ile	Ala	Pro	Ser	Lee et al., 2002	19467
double-strand-break repair protein rad21 homolog	O60216	1-631	peptide-Asp279+Ser-peptide	P		Asp	Ser	Pro	Asp	Ser	Val	Asp	Pro	Chen et al., 2002	16231
Double-strand-break repair protein rad21 homolog	O60216	1-631	peptide-Asp128+Val-peptide	P	MS	Asp	Asp	Ile	Asp	Val	Ala	Gln	Gln	Impens et al., 2010
drebrin-like protein	Q9UJU6	1-430	peptide-Asp361+His-peptide	P		Glu	His	Ile	Asp	His	His	Ile	Gln	Chen et al., 2001	19437
E3 SUMO-protein ligase RanBP2	P49792	1-3224	peptide-Asp2797+Ser-peptide	P	MS	Glu	Glu	Pro	Asp	Ser	Ile	Thr	Lys	Impens et al., 2010
E3 ubiquitin-protein ligase Mdm2	P23804	1-489	peptide-Asp359+Gly-peptide	P		Asp	Val	Pro	Asp	Gly	Lys	Lys	Leu	Erhardt et al., 1997	20011
E3 ubiquitin-protein ligase NEDD4	P46934	1-1000	peptide-Asp526+Val-peptide	P		Gly	Gln	Val	Asp	Val	Pro	Leu	Tyr	Harvey et al., 1998
E3 ubiquitin-protein ligase NEDD4, Isoform 3	P46934-3	1-1247	peptide-Asp526+Ala-peptide	P		Asp	Gln	Pro	Asp	Ala	Ala	Cys	His	Harvey et al., 1998	3824
E3 ubiquitin-protein ligase RBX1	P62877	2-108	peptide-Asp8+Thr-peptide	P	MS	Met	Asp	Val	Asp	Thr	Pro	Ser	Gly	Impens et al., 2010
E3 ubiquitin-protein ligase RNF213	Q63HN8	1-5207	peptide-Asp273+Ala-peptide	P	MS	Met	Ala	Val	Asp	Ala	Val	Ala	Glu	Demon et al., 2009
E3 ubiquitin-protein ligase RNF34	Q969K3	1-372	peptide-Asp232+Asp-peptide	P		Asp	Glu	Asp	Asp	Asp	Asp	Glu	Glu	Sasaki et al., 2002
Early 35 kDa protein	P08160	1-299	peptide-Asp87+Gly-peptide	N		Asp	Gln	Met	Asp	Gly	Phe	His	Asp	Bump et al., 1995	19974
elongation factor 1-beta	P24534	139-163	peptide-Asp154+Met-peptide	N	MS	Asp	Glu	Thr	Asp	Met	Ala	Lys	Leu	Schilling & Overall, 2008
Elongation factor 2	P58252	2-858	Peptide-Asp37+Ser-Peptide	N	MS	Thr	Leu	Thr	Asp	Ser	Leu	Val	Cys	Demon et al., 2009
elongation factor G	P0A6M8	2-704	peptide-Asp45+Gly-peptide	N	MS	Glu	Val	His	Asp	Gly	Ala	Ala	Thr	Timmer et al., 2009
elongation factor G	P0A6M8	2-704	peptide-Asp401+Ala-peptide	N	MS	Cys	Asp	Pro	Asp	Ala	Pro	Ile	Ile	Timmer et al., 2009
Elongation factor G	P0A6M8	578-594	peptide-Asp587+Ser-peptide	N	MS	His	Asp	Val	Asp	Ser	Ser	Glu	Leu	Biniossek et al., 2016
elongation factor Tu	P0A6N1	2-394	peptide-Asp100+Gly-peptide	N	MS	Ala	Gln	Met	Asp	Gly	Ala	Ile	Leu	Timmer et al., 2009
elongation factor Tu	P0A6N1	2-394	peptide-Asp51+Asn-peptide	N	MS	Asp	Gln	Ile	Asp	Asn	Ala	Pro	Glu	Timmer et al., 2009
elongation factor Tu	P0A6N1	2-394	peptide-Asp22+His-peptide	N	MS	Gly	His	Val	Asp	His	Gly	Lys	Thr	Timmer et al., 2009
elongation factor Tu	P0A6N1	2-394	peptide-Asp197+Ser-peptide	N	MS	Gly	Phe	Leu	Asp	Ser	Tyr	Ile	Pro	Timmer et al., 2009
elongation factor Tu	P0A6N1	2-394	peptide-Asp81+Cys-peptide	N	MS	Ala	His	Val	Asp	Cys	Pro	Gly	His	Timmer et al., 2009
Elongation factor Tu 1	P0CE47	91-117	peptide-Asp110+Gly-peptide	N	MS	Ala	Ala	Thr	Asp	Gly	Pro	Met	Pro	Biniossek et al., 2016
Elongation factor Tu 1	P0CE47	91-117	peptide-Asp100+Gly-peptide	N	MS	Ala	Gln	Met	Asp	Gly	Ala	Ile	Leu	Biniossek et al., 2016
Endoplasmin	P08113	22-802	Peptide-Asp28+Gly-Peptide	N	MS	Val	Asp	Val	Asp	Gly	Thr	Val	Glu	Demon et al., 2009
Endoplasmin	P08113	22-802	Peptide-Asp59+Gly-Peptide	N	MS	Ile	Gln	Leu	Asp	Gly	Leu	Asn	Ala	Demon et al., 2009
Endoplasmin	P08113	22-802	Peptide-Asp26+Val-Peptide	N	MS	Asp	Glu	Val	Asp	Val	Asp	Gly	Thr	Demon et al., 2009
enolase	P0A6P9	2-432	peptide-Asp382+Leu-peptide	N	MS	Thr	Ile	Ala	Asp	Leu	Ala	Val	Gly	Timmer et al., 2009
enolase	P0A6P9	2-432	peptide-Asp297+Trp-peptide	N	MS	Asp	Glu	Ser	Asp	Trp	Asp	Gly	Phe	Timmer et al., 2009
Enoyl-[acyl-carrier-protein] reductase [NADH] FabI	P0AEK4	85-110	peptide-Asp101+Gly-peptide	N	MS	Asp	Gln	Leu	Asp	Gly	Asp	Tyr	Val	Biniossek et al., 2016
entericidin B	P0ADB7	22-48	peptide-Asp34+Gly-peptide	N	MS	Asp	Ile	Ser	Asp	Gly	Gly	Asn	Ala	Timmer et al., 2009
epidermal growth factor receptor precursor	P00533	25-1210	peptide-Asp1006+Met-peptide	P		Asp	Glu	Glu	Asp	Met	Asp	Asp	Val	Bae et al., 2001
epidermal growth factor receptor precursor	P00533	25-1210	peptide-Asp1009+Val-peptide	P		Asp	Met	Asp	Asp	Val	Val	Asp	Ala	Bae et al., 2001
epithelial-cadherin precursor	P09803	23-884	peptide-Asp752+Asn-peptide	P		Asp	Thr	Arg	Asp	Asn	Val	Tyr	Tyr	Steinhusen et al., 2001	3778
erythroid transcription factor	P15976	1-413	peptide-Asp125+Gly-peptide	P		Glu	Asp	Leu	Asp	Gly	Lys	Gly	Ser	Maria et al., 1999	19892
eukaryotic translation initiation factor 2 subunit 1	P05198	2-315	peptide-Asp300+Gly-peptide	P		Ala	Glu	Val	Asp	Gly	Asp	Asp	Asp	Satoh et al., 1999	3830
eukaryotic translation initiation factor 2 subunit 1	P05198	2-315	peptide-Asp303+Asp-peptide	P		Asp	Gly	Asp	Asp	Asp	Ala	Glu	Glu	Satoh et al., 1999	19877
eukaryotic translation initiation factor 3 subunit J	O75822	2-258	peptide-Asp242+Tyr-peptide	P		Asp	Leu	Ala	Asp	Tyr	Gly	Gly	Tyr	Bushell et al., 2000	3833
eukaryotic translation initiation factor 3 subunit J	O75822	2-258	peptide-Asp256+Phe-peptide	P		Asp	Tyr	Glu	Asp	Phe	Met	-	-	Bushell et al., 2000
eukaryotic translation initiation factor 4 gamma 1	Q04637	1-1599	peptide-Asp532+Ala-peptide	P		Asp	Leu	Leu	Asp	Ala	Phe	Lys	Glu	Bushell et al., 2000	19412
eukaryotic translation initiation factor 4 gamma 1	Q04637	1-1599	peptide-Asp1175+Arg-peptide	P		Asp	Arg	Leu	Asp	Arg	Ala	Arg	Thr	Bushell et al., 2000	19411
eukaryotic translation initiation factor 4 gamma 2	P78344	1-907	peptide-Asp792+Ser-peptide	P		Asp	Glu	Thr	Asp	Ser	Ser	Ser	Ala	Henis-Korenblit et al., 2000
eukaryotic translation initiation factor 4B	P23588	1-611	peptide-Asp45+Asp-peptide	P		Asp	Glu	Thr	Asp	Asp	Leu	Glu	Gly	Bushell et al., 2000	3835
Eukaryotic translation initiation factor 4B	P23588	1-611	peptide-Asp531+Gly-peptide	P	MS	Asn	Lys	Val	Asp	Gly	Met	Asn	Ala	Impens et al., 2010
eukaryotic translation initiation factor 4E-binding protein 1	Q13541	2-118	peptide-Asp24+Gly-peptide	P		Val	Leu	Gly	Asp	Gly	Val	Gln	Leu	Tee et al., 2002
Eukaryotic translation initiation factor 4H	Q15056	2-248	peptide-Asp93+Ser-peptide	P	MS	Asp	Glu	Val	Asp	Ser	Leu	Lys	Glu	Impens et al., 2010
Eukaryotic translation initiation factor 4H	Q9WUK2	2-248	Peptide-Asp93+Ser-Peptide	N	MS	Asp	Glu	Val	Asp	Ser	Leu	Lys	Glu	Demon et al., 2009
Excitatory amino acid transporter 2 (SLC1A2)	P43004	1-574	peptide-Asp505+Ser-peptide	P	MU	Asp	Thr	Ile	Asp	Ser	Gln	His	Arg	Boston-Howes et al., 2006	18964
FACT complex subunit SSRP1	Q08945	2-709	peptide-Asp450+Ala-peptide	P		Asp	Gln	His	Asp	Ala	Tyr	Leu	Glu	Landais et al., 2006	20023
Far upstream element-binding protein 2	Q92945	1-711	Peptide-Asp72+Ala-Peptide	P	CS	Ile	Arg	Lys	Asp	Ala	Phe	Ala	Asp	Thiede et al., 2001
Far upstream element-binding protein 2	Q92945	1-711	Peptide-Asp76+Ala-Peptide	P	CS	Ala	Phe	Ala	Asp	Ala	Val	Gln	Arg	Thiede et al., 2001
Far upstream element-binding protein 2	Q92945	1-711	Peptide-Asp91+Ala-Peptide	P	CS	Ile	Gly	Gly	Asp	Ala	Ala	Thr	Thr	Thiede et al., 2001
Far upstream element-binding protein 2	Q92945	1-711	Peptide-Asp102+Phe-Peptide	P	CS	Ser	Thr	Pro	Asp	Phe	Gly	Phe	Gly	Thiede et al., 2001
Far upstream element-binding protein 2	Q92945	1-711	Peptide-Asp114+Gly-Peptide	P	CS	Gln	Leu	Glu	Asp	Gly	Asp	Gln	Pro	Thiede et al., 2001
Far upstream element-binding protein 2	Q92945	1-711	Peptide-Asp116+Gln-Peptide	P	CS	Glu	Asp	Gly	Asp	Gln	Pro	Glu	Ser	Thiede et al., 2001
Far upstream element-binding protein 2	Q92945	1-711	Peptide-Asp128+Ser-Peptide	P	CS	Ser	Gln	Gly	Asp	Ser	Ile	Ser	Ser	Thiede et al., 2001
FH1/FH2 domain-containing protein 1	Q9Y613	2-1164	peptide-Asp616+Ser-peptide	P		Ser	Val	Pro	Asp	Ser	Ser	Ala	Leu	Menard et al., 2006	19880
flavin reductase	P30043	187-206	CLTTDEYD+GHSTYPSHQYQ	N	MS	Asp	Glu	Tyr	Asp	Gly	His	Ser	Thr	Schilling & Overall, 2008
flavoprotein wrbA	P0A8G6	2-198	peptide-Asp30+Gly-peptide	N	MS	Ser	Lys	Val	Asp	Gly	Ala	Glu	Val	Timmer et al., 2009
FLJ00279 protein	Q6ZNL4	540-563	peptide-Asp551+Gly-peptide	N	MS	Glu	Glu	Val	Asp	Gly	Lys	Ala	Asp	Schilling & Overall, 2008
focal adhesion kinase 1	Q05397	2-1052	peptide-Asp772+Ser-peptide	P		Asp	Gln	Thr	Asp	Ser	Trp	Asn	His	Gervais et al., 1998	18755
Formate acetyltransferase 1	P09373	297-312	peptide-Asp307+His-peptide	N	MS	Glu	Met	Val	Asp	His	Leu	Val	Met	Biniossek et al., 2016
friend leukemia integration 1	Q544B3	1-452	peptide-Asp20+Ser-peptide	P		Ser	Leu	Phe	Asp	Ser	Ala	Tyr	Gly	Sarrazin et al., 2002	19881
friend leukemia integration 1	Q544B3	1-452	peptide-Asp155+Thr-peptide	P		Met	Glu	Ile	Asp	Thr	Ser	Phe	Phe	Sarrazin et al., 2002	19882
friend leukemia integration 1	Q544B3	1-452	peptide-Asp209+Gln-peptide	P		Ser	His	Thr	Asp	Gln	Ser	Ser	Arg	Sarrazin et al., 2002	19883
Fructose-1,6-bisphosphatase class 1	P0A993	254-269	peptide-Asp267+Gly-peptide	N	MS	Ser	His	Pro	Asp	Gly	Lys	Leu	Arg	Biniossek et al., 2016
fructose-bisphosphate aldolase class 2	P0AB71	2-359	peptide-Asp187+Asn-peptide	N	MS	Asp	Gly	Val	Asp	Asn	Ser	His	Met	Timmer et al., 2009
fusion	Q59H57	122-139	AAIDWFD+GKEFSGNPIK	N	MS	Asp	Trp	Phe	Asp	Gly	Lys	Glu	Phe	Schilling & Overall, 2008
Galactokinase	P0A6T3	29-59	peptide-Asp40+Gly-peptide	N	MS	Asp	Tyr	Asn	Asp	Gly	Phe	Val	Leu	Biniossek et al., 2016
GAS2	O43903	1-313	peptide-Asp278+Gly-peptide	P		Ser	Arg	Val	Asp	Gly	Lys	Thr	Ser	Sgorbissa et al., 2000	3759
gasdermin-D	Q9D8T2	1-487	peptide-Asp88+Gly-peptide	P	NT	Asp	Val	Val	Asp	Gly	Asn	Ile	Gln
GCP360	Q63714	1-3187	peptide-Asp1083+Gly-peptide	P	MU	Asp	Ala	Gly	Asp	Gly	Asp	Ser	Ala	Lowe et al., 2004	20735
GCP360	Q63714	1-3187	peptide-Asp1882+Ala-peptide	P	MU	Asp	Val	Thr	Asp	Ala	Gln	Ile	Lys	Lowe et al., 2004
gelsolin precursor	P13020	26-780	peptide-Asp403+Gly-peptide	P		Asp	Gln	Thr	Asp	Gly	Pro	Gly	Leu	Kothakota et al., 1997	3839
GEM-interacting protein	Q9P107	1-970	peptide-Asp842+Gly-peptide	P	MS	Asp	Thr	Lys	Asp	Gly	Gly	Gly	Glu	Impens et al., 2010
geminin	O75496	1-209	peptide-Asp204+Ala-peptide	P	MS	Ser	Ser	Thr	Asp	Ala	Lys	Pro	Cys	Roukos et al., 2007	19977
geminin	O75496	1-209	peptide-Asp170+Asn-peptide	P	MS	Glu	Ser	Leu	Asp	Asn	Gln	Glu	Phe	Roukos et al., 2007	19978
general vesicular transport factor p115	O60763	1-962	peptide-Asp757+Ser-peptide	P		Thr	Glu	Lys	Asp	Ser	Met	Ile	Glu	Chiu et al., 2002	19473
glial fibrillary acidic protein	P14136	1-432	peptide-Asp266+Ala-peptide	P	CS	Asp	Leu	Thr	Asp	Ala	Ala	Ala	Arg	Mouser et al., 2006	19979
glucose-6-phosphate isomerase	P06744	524-550	peptide-Asp539+Ala-peptide	N	MS	Thr	Ser	His	Asp	Ala	Ser	Thr	Asn	Schilling & Overall, 2008
glucose-6-phosphate isomerase	P06744	524-550	peptide-Asp530+Gly-peptide	N	MS	Pro	Glu	Leu	Asp	Gly	Ser	Ala	Gln	Schilling & Overall, 2008
glutamate--cysteine ligase catalytic subunit	P48506	2-637	peptide-Asp498+Gly-peptide	P		Ala	Val	Val	Asp	Gly	Cys	Gly	Lys	Franklin et al., 2002	19976
Glutaredoxin 2	P0AC59	72-75	peptide-Asp73+Gly-peptide	N	MS	Asp	Lys	Leu	Asp	Gly	Lys	Pro	Leu	Biniossek et al., 2016
glutaredoxin-3	O76003	99-110	LD+GAHAPELTK	N	MS	-	-	Leu	Asp	Gly	Ala	His	Ala	Schilling & Overall, 2008
Glutathione S-transferase P 1	P19157	2-210	Peptide-Asp91+Met-Peptide	N	MS	Ala	Gln	Met	Asp	Met	Val	Asn	Asp	Demon et al., 2009
Glutathione S-transferase P 2	P46425	2-210	peptide-Asp91+Met-peptide	P	MS	Ala	Gln	Val	Asp	Met	Val	Asn	Asp	Demon et al., 2009
Glycerol kinase	P0A6F3	144-153	peptide-Glu150+Gly-peptide	N	MS	Asp	His	Val	Glu	Gly	Ser	Arg	Glu	Biniossek et al., 2016
Glycerophosphodiester phosphodiesterase, periplasmic	P09394	338-350	peptide-Asp349+Lys-peptide	N	MS	Asp	Phe	Pro	Asp	Lys	Ala	Val	Lys	Biniossek et al., 2016
glycylpeptide N-tetradecanoyltransferase 1	P30419	1-496	peptide-Asp72+Ser-peptide	P	MS	Ser	Glu	Thr	Asp	Ser	Ala	Gln	Asp	Impens et al., 2010
golgi reassembly stacking protein 1	O35254	2-451	peptide-Asp320+Ser-peptide	P		Ser	Leu	Leu	Asp	Ser	Asn	Asn	Thr	Lane et al., 2002
golgi reassembly stacking protein 1	O35254	2-451	peptide-Asp375+Ser-peptide	P		Ser	Phe	Pro	Asp	Ser	Pro	Gly	Ser	Lane et al., 2002
golgi reassembly stacking protein 1	O35254	2-451	peptide-Asp393+Gly-peptide	P		Thr	Leu	Pro	Asp	Gly	Leu	Thr	Ser	Lane et al., 2002
golgin subfamily A member 3	Q08378	1-1498	peptide-Asp139+Ser-peptide	N		Cys	Ser	Thr	Asp	Ser	Pro	Leu	Pro	Mancini et al., 2000	3842
golgin subfamily B member 1	Q14789	1943-1959	VTD+AQIKNELLESEMK	N	MS	-	Val	Thr	Asp	Ala	Gln	Ile	Lys	Schilling & Overall, 2008	20738
GRB2-related adapter protein 2	O75791	1-330	peptide-Asp241+Gly-peptide	P		Asp	Ile	Asn	Asp	Gly	His	Cys	Gly	Yankee et al., 2001	19980
H/ACA ribonucleoprotein complex subunit 2	Q9NX24	1-153	peptide-Asp9+Gly-peptide	P	MS	Ala	Asp	Pro	Asp	Gly	Pro	Glu	Ala	Impens et al., 2010
HAX1 HCLS1 associated protein X-1 isoform a	O00165	2-279	peptide-Asp127+Ser-peptide	P		Thr	Leu	Arg	Asp	Ser	Met	Leu	Lys	Lee et al., 2008	21062
HCLS1-binding protein 3	Q3TC93	1-395	Peptide-Asp274+Leu-Peptide	N	MS	Asp	Asp	Pro	Asp	Leu	Gly	Gly	Ala	Demon et al., 2009
heat shock 70 kDa protein 1	P08107	159-171	D+AGVIAGLNVLR	N	MS	-	-	-	Asp	Ala	Gly	Val	Ile	Schilling & Overall, 2008
heat shock 70 kDa protein 1L	P34931	161-173	D+AGVIAGLNVLR	N	MS	-	-	-	Asp	Ala	Gly	Val	Ile	Schilling & Overall, 2008
Heat shock protein HSP 90-beta	P08238	2-724	peptide-Asp259+Asp-peptide	P	CS	Asp	Glu	Glu	Asp	Asp	Ser	Gly	Lys	Ju et al., 2007
Hematopoietic lineage cell-specific protein	P14317	1-486	peptide-Asp115+Ala-peptide	P	MS	Ser	Gln	Thr	Asp	Ala	Ala	Lys	Gly	Impens et al., 2010
Hematopoietic lineage cell-specific protein	P14317	1-486	peptide-Asp189+Tyr-peptide	P	MS	Ser	Gln	Arg	Asp	Tyr	Ala	Lys	Gly	Impens et al., 2010
Hematopoietic lineage cell-specific protein	P49710	1-486	Peptide-Asp189+Tyr-Peptide	N	MS	Ser	Gln	Arg	Asp	Tyr	Ala	Lys	Gly	Demon et al., 2009
hepatocyte growth factor receptor	P16056	25-1379	peptide-Asp1000+Tyr-peptide	P		Glu	Ser	Val	Asp	Tyr	Arg	Ala	Thr	Tulasne et al., 2004	19515
Hepatoma-derived growth factor	P51859	1-237	Peptide-Asp205+Ser-Peptide	N	MS	Ser	Glu	Pro	Asp	Ser	Gly	Gln	Gly	Demon et al., 2009
heterogeneous nuclear ribonucleoprotein A1	P09651	2-372	peptide-Asp288+Ser-peptide	P		Gly	Ser	Tyr	Asp	Ser	Tyr	Asn	Asn	Thiede et al., 2001
heterogeneous nuclear ribonucleoprotein A1	P09651	2-372	peptide-Asp313+Phe-peptide	P		Ser	Tyr	Asn	Asp	Phe	Gly	Asn	Tyr	Thiede et al., 2001
heterogeneous nuclear ribonucleoprotein Q	O60506	1-623	peptide-Asp468+Tyr-peptide	P		Asp	Tyr	Tyr	Asp	Tyr	Tyr	Gly	Tyr	Thiede et al., 2001
heterogeneous nuclear ribonucleoprotein Q	O60506	1-623	peptide-Asp465+Tyr-peptide	P		Gly	Tyr	Glu	Asp	Tyr	Tyr	Asp	Tyr	Thiede et al., 2001
heterogeneous nuclear ribonucleoprotein Q	O60506	1-623	peptide-Asp459+Tyr-peptide	P		Tyr	Pro	Pro	Asp	Tyr	Tyr	Gly	Tyr	Thiede et al., 2001
heterogeneous nuclear ribonucleoprotein R	O43390	1-633	peptide-Asp66+Ala-peptide	P		Arg	Ala	Ile	Asp	Ala	Leu	Arg	Glu	Thiede et al., 2001
heterogeneous nuclear ribonucleoprotein R	O43390	1-633	peptide-Asp472+Asp-peptide	P		Asp	Tyr	Tyr	Asp	Asp	Tyr	Tyr	Gly	Thiede et al., 2001
heterogeneous nuclear ribonucleoprotein R	O43390	1-633	peptide-Asp87+Leu-peptide	P		Lys	Glu	Ser	Asp	Leu	Ser	His	Val	Thiede et al., 2001
heterogeneous nuclear ribonucleoprotein R	O43390	1-633	peptide-Asp481+Tyr-peptide	P		Asp	Tyr	His	Asp	Tyr	Arg	Gly	Gly	Thiede et al., 2001
heterogeneous nuclear ribonucleoprotein U	Q00839	2-825	peptide-Asp100+Gly-peptide	P		Ser	Ala	Leu	Asp	Gly	Asp	Gln	Met	Kipp et al., 2000	3846
Heterogeneous nuclear ribonucleoprotein U	Q8VEK3	2-800	peptide-Asp208+Gly-peptide	P	MS	Ala	Gly	Gly	Asp	Gly	Lys	Thr	Glu	Demon et al., 2009
heterogeneous nuclear ribonucleoproteins A2/B1	P22626	1-353	peptide-Asp49+Cys-peptide	P		Lys	Leu	Thr	Asp	Cys	Val	Val	Met	Thiede et al., 2001
heterogeneous nuclear ribonucleoproteins A2/B1	P22626	1-353	peptide-Asp55+Pro-peptide	P		Val	Met	Arg	Asp	Pro	Ala	Ser	Lys	Thiede et al., 2001
heterogeneous nuclear ribonucleoproteins A2/B1	P22626	1-353	peptide-Asp76+Ala-peptide	P		Ala	Glu	Val	Asp	Ala	Ala	Met	Ala	Thiede et al., 2001
heterogeneous nuclear ribonucleoproteins A2/B1	P22626	62-89	peptide-Asp64+Ala-peptide	N	MS	Ala	Glu	Val	Asp	Ala	Ala	Met	Ala	Schilling & Overall, 2008
heterogeneous nuclear ribonucleoproteins C1/C2	P07910	2-306	peptide-Asp298+Ser-peptide	P		Asp	Asp	Arg	Asp	Ser	Ala	Asn	Gly	Thiede et al., 2001
heterogeneous nuclear ribonucleoproteins C1/C2	P07910	2-306	peptide-Asp296+Arg-peptide	P		Gly	Glu	Asp	Asp	Arg	Asp	Ser	Ala	Thiede et al., 2001
heterogeneous nuclear ribonucleoproteins C1/C2	P07910	2-306	peptide-Asp295+Asp-peptide	P		Glu	Gly	Glu	Asp	Asp	Arg	Asp	Ser	Thiede et al., 2001
heterogeneous nuclear ribonucleoproteins C1/C2	P07910	2-306	peptide-Asp10+Pro-peptide	P		Asn	Lys	Thr	Asp	Pro	Arg	Ser	Met	Thiede et al., 2001
Heterogenous nuclear ribonucleoprotein U	O88568	1-798	Peptide-Asp206+Gly-Peptide	N	MS	Ala	Gly	Gly	Asp	Gly	Lys	Thr	Glu	Demon et al., 2009
Histone deacetylase 4	P56524	1-1084	Peptide-Asp289+Ser-Peptide	P	MU	Asp	Val	Thr	Asp	Ser	Ala	Cys	Ser	Paroni et al., 2004
histone H4	P62805	24-36	D+NIQGITKPAIR	N	MS	-	-	-	Asp	Asn	Ile	Gln	Gly	Schilling & Overall, 2008
huntingtin	P42858	1-3142	peptide-Asp552+Gly-peptide	P		Asp	Leu	Asn	Asp	Gly	Thr	Gln	Ala	Wellington et al., 2000	3800
huntingtin	P42858	1-3142	peptide-Asp513+Leu-peptide	P		Asp	Ser	Val	Asp	Leu	Ala	Ser	Cys	Wellington et al., 2000	3864
huntingtin	P42858	1-3142	peptide-Asp530+Ile-peptide	P		Asp	Glu	Glu	Asp	Ile	Leu	Ser	His	Wellington et al., 2000	16233
huntingtin	P42858	1-3142	peptide-Asp586+Gly-peptide	P		Ile	Val	Leu	Asp	Gly	Thr	Asp	Asn	Wellington et al., 2000
Hypoxia up-regulated protein 1	Q9Y4L1	33-999	peptide-Asp338+Phe-peptide	P	MS	Asp	Asp	Val	Asp	Phe	Lys	Ala	Lys	Impens et al., 2010
induced myeloid leukemia cell differentiation protein Mcl-1	Q07820	1-350	peptide-Asp127+Gly-peptide	P		Glu	Glu	Leu	Asp	Gly	Tyr	Glu	Pro	Weng et al., 2005	18961
induced myeloid leukemia cell differentiation protein Mcl-1	Q07820	1-350	peptide-Asp157+Gly-peptide	P		Thr	Ser	Thr	Asp	Gly	Ser	Leu	Pro	Weng et al., 2005	19228
induced myeloid leukemia cell differentiation protein Mcl-1	Q07820	1-350	peptide-Asp117+Ala-peptide	P	MU	Pro	Ala	Ala	Asp	Ala	Ile	Met	Ser	Han et al., 2005
inositol 1,4,5-trisphosphate receptor type 1	P11881	1-2749	peptide-Asp1891+Arg-peptide	P		Asp	Glu	Val	Asp	Arg	Asp	Ala	Pro	Lagace et al., 2002	19984
Integrin beta-4	P16144	28-1822	peptide-Asp1109+Arg-peptide	P	MU	Asp	Glu	Leu	Asp	Arg	Ser	Phe	Thr	Werner et al., 2007
interferon-induced helicase C domain-containing protein 1	Q8R5F7	1-1025	peptide-Asp208+Leu-peptide	P		Asp	Asn	Thr	Asp	Leu	Ala	Asn	Ser	Kovacsovics et al., 2002	19866
interferon-induced helicase C domain-containing protein 1	Q8R5F7	1-1025	peptide-Asp251+Ser-peptide	P		Ser	Cys	Thr	Asp	Ser	Ser	Val	Thr	Kovacsovics et al., 2002
interferon-induced, double-stranded RNA-activated protein kinase	P19525	1-551	peptide-Asp251+Met-peptide	P		Asp	Leu	Pro	Asp	Met	Lys	Glu	Thr	Saelens et al., 2001	3765
Interleukin enhancer-binding factor 3 isoform 4	Q12906-4	1-698	peptide-Asp439+Gly-peptide	N	MS	Val	Glu	Val	Asp	Gly	Asn	Ser	Phe	Schilling & Overall, 2008	22674
Interleukin enhancer-binding factor 3 isoform 4	Q12906-4	1-698	FVMEVEVD+GQKFQGAGSNK	N	MS	Val	Glu	Val	Asp	Gly	Gln	Lys	Phe	Schilling & Overall, 2008
interleukin-16 precursor, Isoform 3	Q14005-3	1-631	peptide-Asp510+Ser-peptide	P		Ser	Ser	Thr	Asp	Ser	Ala	Ala	Ser	Zhang et al., 1998	18830
interleukin-18	Q14116	37-193	peptide-Asp71+Ser-peptide	P		Asp	Met	Thr	Asp	Ser	Asp	Cys	Arg	Akita et al., 1997	3815
interleukin-18	Q14116	37-193	peptide-Asp76+Asn-peptide	P		Asp	Cys	Arg	Asp	Asn	Ala	Pro	Arg	Akita et al., 1997	3816
isocitrate lyase	P0A9G6	1-434	peptide-Asp236+Ala-peptide	N	MS	Thr	Asp	Ala	Asp	Ala	Ala	Asp	Leu	Timmer et al., 2009
Isoleucine--tRNA ligase	P00956	861-887	peptide-Asp875+Ala-peptide	N	MS	Asp	Tyr	Asn	Asp	Ala	Pro	Ala	Asp	Biniossek et al., 2016
Kanadaptin	Q9BWU0	1-796	peptide-Asp537+Ala-peptide	P	MS	Asp	Ser	Leu	Asp	Ala	Phe	Met	Ser	Impens et al., 2010
karatin, type I cytoskeletal 15	P19012	1-456	peptide-Asp445+Gly-peptide	P		Glu	Ser	Val	Asp	Gly	Gln	Val	Val	Badock et al., 2001	20716
karatin, type I cytoskeletal 18	P05783	2-430	peptide-Ala238+Pro-peptide	P		Val	Glu	Val	Asp	Ala	Pro	Lys	Ser	Ku et al., 1997	19422
keratin, type I cytoskeletal 18	P05783	1-430	peptide-Asp397+Ser-peptide	P		Asp	Ala	Leu	Asp	Ser	Ser	Asn	Ser	MacFarlane et al., 2000	19423
Kinesin-associated protein 3	P70188	1-793	Peptide-Asp249+Glu-Peptide	N	MS	Lys	Ala	Val	Asp	Glu	Asp	Leu	Glu	Demon et al., 2009
La-related protein 1	Q6ZQ58	2-1072	Peptide-Asp472+Phe-Peptide	N	MS	Ser	Gln	Thr	Asp	Phe	Ser	Gln	Leu	Demon et al., 2009
Lamin-B1	P20700	2-583	peptide-Asp231+Ser-peptide	P	CS	Val	Glu	Val	Asp	Ser	Gly	Arg	Gln	Ju et al., 2007
lamina-associated polypeptide 2, isoform alpha	P42166	1-694	peptide-Asp413+Gln-peptide	P		Lys	Arg	Ile	Asp	Gln	Ser	Lys	Phe	Buendia et al., 1999	20922
lamina-associated polypeptide 2, isoform alpha	P42166	2-694	peptide-Asp441+Ser-peptide	N	CS	Glu	Glu	Arg	Asp	Ser	Gly	Ser	Phe	Gotzmann et al., 2000
Large proline-rich protein BAG6	P46379	1-1132	peptide-Asp1001+Gly-peptide	P		Asp	Glu	Gln	Asp	Gly	Ala	Ser	Ala	Wu et al., 2004	19859
Lipopolysaccharide-responsive and beige-like anchor protein	P50851	2-2863	peptide-Asp1756+Ser-peptide	P	MS	Ser	Ser	Val	Asp	Ser	Ala	Gln	Ala	Impens et al., 2010
Liprin-alpha-1	Q13136	1-1202	peptide-Asp836+Asn-peptide	P	MS	Ser	Glu	Thr	Asp	Asn	Ser	Ser	Gln	Impens et al., 2010
Luciferase-like monooxygenase	P0ADV5	138-149	peptide-Asp147+Ala-peptide	N	MS	Asp	Trp	Phe	Asp	Ala	Arg	Asp	Pro	Biniossek et al., 2016
Lupus La protein	P05455	1-408	peptide-Asp371+Glu-peptide	P	CS	Asp	Glu	His	Asp	Glu	His	Asp	Glu	Ju et al., 2007
Lupus La protein	P05455	1-408	peptide-Asp374+Glu-peptide	P	CS	Asp	Glu	His	Asp	Glu	Asn	Gly	Ala	Ju et al., 2007
Lysine--tRNA ligase, heat inducible	P0A8N5	338-352	peptide-Asp349+Ala-peptide	N	MS	Asp	Asn	Phe	Asp	Ala	Ala	Lys	Ala	Biniossek et al., 2016
Lysosomal protective protein	P16675	24-474	Peptide-Asp31+Cys-Peptide	N	MS	Asp	Glu	Ile	Asp	Cys	Leu	Pro	Gly	Demon et al., 2009
Lysyl-tRNA synthetase	Q15046	2-597	peptide-Asp12+Gly-peptide	P	MS	Val	Lys	Val	Asp	Gly	Ser	Glu	Pro	Impens et al., 2010
matrin-3	P43243	636-739	peptide-Asp680+Leu-peptide	N	CS	Asp	Glu	Thr	Asp	Leu	Ala	Asn	Leu	Valencia et al., 2007	20140
Melanoma-associated antigen D1	Q9Y5V3	1-778	peptide-Asp222+Gly-peptide	P	MS	Ser	Glu	Pro	Asp	Gly	Ala	Thr	Ala	Impens et al., 2010
Melanoma-associated antigen D1	Q9Y5V3	1-778	peptide-Asp678+Ala-peptide	P	MS	Asp	Ala	Leu	Asp	Ala	Ala	Ala	Ala	Impens et al., 2010
membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1	Q96QZ7	1-1491	peptide-Asp563+Asp-peptide	P		Phe	Asp	Pro	Asp	Asp	Pro	Asn	Thr	Gregorc et al., 2007	19860
membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1	Q96QZ7	1-1491	peptide-Asp782+Ser-peptide	P		Asp	Gln	Thr	Asp	Ser	Ser	Gly	Gln	Gregorc et al., 2007	19861
methylenetetrahydrofolate dehydrogenase	Q7Z650	17-40	peptide-Asp25+Gly-peptide	N	MS	Asp	Asn	Val	Asp	Gly	Leu	Leu	Val	Schilling & Overall, 2008
microphthalmia-associated transcription factor	O75030	1-526	peptide-Asp345+Met-peptide	P		Asn	Asp	Pro	Asp	Met	Arg	Trp	Asn	Larribere et al., 2005
microtubule-actin cross-linking factor 1, isoform 4	Q9UPN3-5	2221-2242	peptide-Asp2228+Gly-peptide	N	MS	Asp	Thr	Thr	Asp	Gly	Tyr	Met	Gly	Schilling & Overall, 2008
microtubule-associated protein 1B	P46821	1191-1220	peptide-Asp1196+Gly-peptide	N	MS	Asp	Ala	Thr	Asp	Gly	Lys	Asp	Tyr	Schilling & Overall, 2008
microtubule-associated protein tau	P10636	2-758	peptide-Asp421+Pro-peptide	P		Gly	Ser	Ser	Asp	Pro	Leu	Ile	Gln	Gamblin et al., 2003
microtubule-associated protein tau	P10636	2-758	peptide-Asp738+Ser-peptide	P		Asp	Met	Val	Asp	Ser	Pro	Gln	Leu	Fasulo et al., 2000	3775
Mitochondrial antiviral-signaling protein	Q7Z434	1-540	Peptide-Asp429+Ser-Pro-Phe	P	MU	Ser	Gln	Val	Asp	Ser	Pro	Phe	-	Yu et al., 2010
mitogen-activated protein kinase kinase kinase 1	P53349	1-1493	peptide-Asp874+Gly-peptide	P		Asp	Thr	Val	Asp	Gly	His	Gln	Asp	Widmann et al., 1998	20751
mitogen-activated protein kinase kinase kinase 1	Q13233	1-1512	peptide-Asp875+Thr-peptide	P		Gly	Val	Glu	Asp	Thr	Leu	Asp	Gly	Cardone et al., 1997	20001
mitogen-activated protein kinase kinase kinase 1	Q13233	1-1512	peptide-Asp878+Gly-peptide	P		Asp	Thr	Leu	Asp	Gly	Gln	Gln	Asp	Cardone et al., 1997
mitogen-activated protein kinase kinase kinase kinase 1	Q92918	1-833	peptide-Asp385+Ile-peptide	P		Asp	Asp	Val	Asp	Ile	Pro	Thr	Pro	Chen et al., 1999	3809
Mps one binder kinase activator-like 3	Q9Y3A3	1-225	peptide-Asp34+Ser-peptide	P	MS	Asp	Glu	Met	Asp	Ser	Thr	Leu	Ala	Impens et al., 2010
Mps one binder kinase activator-like 3	Q6PEB6	1-225	Peptide-Asp34+Ser-Peptide	N	MS	Asp	Glu	Met	Asp	Ser	Thr	Leu	Ala	Demon et al., 2009
mRNA interferase toxin MqsR	Q46865	57-72	peptide-His64+Thr-peptide	N	MS	Tyr	Ser	Asp	His	Thr	Ile	Trp	Gln	Biniossek et al., 2016
Multifunctional protein ADE2	P22234	2-425	peptide-Asp26+Ser-peptide	P	MS	Glu	Leu	Leu	Asp	Ser	Pro	Gly	Lys	Impens et al., 2010
multisynthetase complex auxiliary component p43	P31230	1-310	peptide-Asp144+Ser-peptide	P		Ala	Ser	Thr	Asp	Ser	Lys	Pro	Ile	Knies et al., 1998
myocyte-specific enhancer factor 2A	Q02078	1-507	peptide-Asp176+Ser-peptide	P		Thr	Leu	Thr	Asp	Ser	Ser	Met	Leu	Okamoto et al., 2002	3745
myocyte-specific enhancer factor 2A	Q02078	1-507	peptide-Asp213+Leu-peptide	P		Ser	Thr	Thr	Asp	Leu	Thr	Val	Pro	Okamoto et al., 2002
myocyte-specific enhancer factor 2A	Q02078	1-507	peptide-Asp466+Gly-peptide	P		Ser	Ser	Tyr	Asp	Gly	Ser	Asp	Arg	Okamoto et al., 2002
myocyte-specific enhancer factor 2C	Q06413	1-473	peptide-Asp432+Gly-peptide	P		Ser	Ser	Tyr	Asp	Gly	Ser	Asp	Arg	Okamoto et al., 2002
myosin light chain 3	P08590	2-195	peptide-Glu135+Gly-peptide	P		Asp	Phe	Val	Glu	Gly	Leu	Arg	Val	Moretti et al., 2002	3748
Myosin-10	P35580	2-1976	peptide-Asp1160+Thr-peptide	P	MS	Asp	Thr	Leu	Asp	Thr	Thr	Ala	Ala	Impens et al., 2010
myosin-9	P35579	1937-1960	peptide-Asp1948+Gly-peptide	N	MS	Glu	Glu	Val	Asp	Gly	Lys	Ala	Asp	Schilling & Overall, 2008
Myosin-9	P35579	2-1960	peptide-Asp1153+Ser-peptide	P	MS	Asp	Thr	Leu	Asp	Ser	Thr	Ala	Ala	Impens et al., 2010
Myosin-9	Q8VDD5	2-1960	Peptide-Asp1153+Ser-Peptide	N	MS	Asp	Thr	Leu	Asp	Ser	Thr	Ala	Ala	Demon et al., 2009
NAD-dependent dihydropyrimidine dehydrogenase subunit PreT	P76440	303-321	peptide-Asp310+Gly-peptide	N	MS	Ser	Ile	Ile	Asp	Gly	Phe	Thr	Pro	Biniossek et al., 2016
NCL protein	Q9BQ02	399-420	peptide-Asp408+Gly-peptide	N	MS	Gly	Glu	Ile	Asp	Gly	Asn	Lys	Val	Schilling & Overall, 2008
netrin receptor DCC precursor	P43146	26-1447	peptide-Asp1290+Arg-peptide	P		Leu	Ser	Val	Asp	Arg	Gly	Phe	Gly	Mehlen et al., 1998
netrin receptor UNC5B	O08722	27-945	peptide-Asp412+Ser-peptide	N		Asp	Ile	Thr	Asp	Ser	Ser	Ala	Ala		16234
netrin receptor UNC5B precursor	Q8IZJ1	27-945	peptide-Asp412+Ser-peptide	N		Asp	Ile	Thr	Asp	Ser	Ser	Ala	Ala
neurogenic locus notch homolog protein 1	P46531	19-2555	peptide-Asp1839+His-peptide	P		Asp	Gln	Thr	Asp	His	Arg	Gln	Trp	Cohen et al., 2005	20743
NF-kappaB inhibitor alpha	Q91974	1-318	peptide-Asp35+Ser-peptide	P		Asp	Arg	His	Asp	Ser	Gly	Leu	Asp	Barkett et al., 1997
NFE2L2	Q16236	1-589	peptide-Asp224+Asn-peptide	P		Thr	Glu	Val	Asp	Asn	Tyr	His	Phe	Ohtsubo et al., 2000	19537
NFE2L2	Q16236	1-589	peptide-Asp382+Ser-peptide	P		Glu	Glu	Leu	Asp	Ser	Ala	Pro	Gly	Ohtsubo et al., 2000	19538
non-POU domain-containing octamer-binding protein	Q15233	1-471	peptide-Asp422+Gly-peptide	P		Met	Met	Pro	Asp	Gly	Thr	Leu	Gly	Thiede et al., 2001
non-syndromic hearing impairment protein 5	O60443	1-496	peptide-Asp270+Ala-peptide	P	NT	Asp	Met	Pro	Asp	Ala	Ala	His	Gly	Wang et al., 2017
Nuclear autoantigenic sperm protein	P49321	2-788	peptide-Asp523+Leu-peptide	P	MS	Asp	Met	Leu	Asp	Leu	Ala	Lys	Ile	Impens et al., 2010
nuclear envelope pore membrane protein POM 121	P52591	1-1199	peptide-Asp531+Asp-peptide	N		Asp	Lys	Thr	Asp	Asp	Ala	Ser	Thr		16236
nuclear factor of activated T-cells, cytoplasmic 2	Q13469	1-925	peptide-Asp29+Phe-peptide	P		Asp	Glu	Leu	Asp	Phe	Ser	Ile	Leu	Wu et al., 2006	19693
nuclear factor of activated T-cells, cytoplasmic 2	Q13469	1-925	peptide-Asp66+Tyr-peptide	P		Asp	Val	Leu	Asp	Tyr	Gly	Leu	Lys	Wu et al., 2006	19694
Nuclear factor of activated T-cells, cytoplasmic 3	Q12968	2-1075	peptide-Asp193+Ser-peptide	P	MS	Asp	Asp	Val	Asp	Ser	Glu	Leu	Asn	Impens et al., 2010
nuclear pore complex protein Nup153	P49790	1-1475	peptide-Asp349+Phe-peptide	P		Asp	Ile	Thr	Asp	Phe	Gln	Ala	Lys	Buendia et al., 1999
Nuclear ubiquitous casein and cyclin-dependent kinases substrate	Q80XU3	1-234	Peptide-Asp29+Ser-Peptide	N	MS	Tyr	Gly	Arg	Asp	Ser	Gly	Pro	Pro	Demon et al., 2009
nucleolin	P19338	2-710	peptide-Asp454+Gly-peptide	P		Thr	Glu	Ile	Asp	Gly	Arg	Ser	Ile	Thiede et al., 2001
nucleolin	P19338	2-710	peptide-Asp628+Gly-peptide	P		Ala	Met	Glu	Asp	Gly	Glu	Ile	Asp	Thiede et al., 2001
nucleolin	P19338	2-710	peptide-Asp632+Gly-peptide	P		Gly	Glu	Ile	Asp	Gly	Asn	Lys	Val	Thiede et al., 2001
nucleoprotein	P04134	1-382	peptide-Asp359+Ala-peptide	N		Val	Val	Pro	Asp	Ala	Leu	Ile	Glu	Eleouet et al., 2000	20928
Nucleoside diphosphate kinase	P0A763	105-127	peptide-Asp109+Ser-peptide	N	MS	Asp	Tyr	Ala	Asp	Ser	Leu	Thr	Glu	Biniossek et al., 2016
occludin	Q16625	1-522	peptide-Asp320+Ser-peptide	P		Glu	Arg	Val	Asp	Ser	Pro	Met	Ala	Bojarski et al., 2004	19762
osmotically-inducible protein Y	P0AFH8	29-201	peptide-Asp163+Gly-peptide	N	MS	Glu	Thr	Thr	Asp	Gly	Val	Val	Gln	Timmer et al., 2009
osteopontin	P10451	17-314	peptide-Asp157+Gly-peptide	P	MU	Asp	Thr	Tyr	Asp	Gly	Arg	Gly	Asp	Kim et al., 2009
parkin	O60260	1-465	peptide-Asp126+Ser-peptide	P		Leu	His	Thr	Asp	Ser	Arg	Lys	Asp	Cryns et al., 1997
Partner of Y14 and mago	Q9BRP8	1-204	peptide-Asp143+Ser-peptide	P	MS	Asp	Gln	Pro	Asp	Ser	Ala	Ala	Thr	Impens et al., 2010
paxillin	P49023	1-591	peptide-Asp102+Ser-peptide	P		Asn	Pro	Gln	Asp	Ser	Val	Gly	Ser	Chay et al., 2002	3829
paxillin	P49023	1-591	peptide-Asp335+peptide	P		Ser	Gln	Leu	Asp	Ser	Met	Leu	Gly	Chay et al., 2002
paxillin	P49023	1-591	peptide-Asp5+Ala-peptide	P		Asp	Asp	Leu	Asp	Ala	Leu	Leu	Ala	Chay et al., 2002	21990
paxillin	P49023	1-591	peptide-Asp146+Leu-peptide	P		Ser	Glu	Leu	Asp	Arg	Leu	Leu	Leu	Chay et al., 2002	3834
paxillin	P49023	1-591	peptide-Asp165+Glu-peptide	P		Phe	Pro	Ala	Asp	Glu	Ala	Asn	Ser	Chay et al., 2002	3836
paxillin	P49023	1-591	peptide-Asp222+Glu-peptide	P		Ser	Leu	Leu	Asp	Glu	Leu	Glu	Ser	Chay et al., 2002	3837
PC4 and SFRS1-interacting protein	O75475	1-530	peptide-Asp486+Gly-peptide	P		Asp	Ala	Gln	Asp	Gly	Asn	Gln	Pro	Wu et al., 2002	3788
PC4 and SFRS1-interacting protein	O75475	1-530	peptide-Asp85+Asn-peptide	P		Trp	Glu	Ile	Asp	Asn	Asn	Pro	Lys	Wu et al., 2002	3787
PC4 and SFRS1-interacting protein	O75475	1-530	peptide-Asp30+Gly-peptide	P		Glu	Val	Pro	Asp	Gly	Ala	Val	Lys	Wu et al., 2002	3786
PDE6A	P16499	2-860	peptide-Asp167+Ile-peptide	P		Asp	Phe	Val	Asp	Ile	Leu	Thr	Glu	Frame et al., 2001	18974
peptidyl-prolyl cis-trans isomerase-like 4	Q8WUA2	91-138	peptide-Asp120+Gly-peptide	N	MS	Asp	Tyr	Leu	Asp	Gly	Val	His	Thr	Schilling & Overall, 2008
phosphate acetyltransferase	P0A9M8	2-714	peptide-Asp622+Gly-peptide	N	MS	Leu	Met	Ile	Asp	Gly	Pro	Leu	Gln	Timmer et al., 2009
phosphatidylinositol-4-phosphate 5-kinase type I alpha	Q99755	1-562	peptide-Asp292+Gly-peptide	P		Asp	Ile	Pro	Asp	Gly	Leu	Phe	Leu	Mejillano et al., 2001	3806
phosphoenolpyruvate-protein phosphotransferase	P08839	1-575	peptide-Asp265+Gly-peptide	N	MS	Ile	Thr	Leu	Asp	Gly	His	Gln	Val	Timmer et al., 2009
Phosphoribosyl pyrophosphate synthase-associated protein 2	Q8R574	1-369	Peptide-Asp276+Ser-Peptide	N	MS	Asp	Asp	Val	Asp	Ser	Phe	Leu	Ala	Demon et al., 2009
phosphoribosyl pyrophosphate synthetase-associated protein 1	Q14558	1-356	peptide-Asp237+Met-peptide	P		Thr	Glu	Leu	Asp	Met	Asp	Asp	Gly	Dix et al., 2008	22738
Phosphoribosylformylglycinamidine synthase	P15254	178-196	peptide-Asp188+Tyr-peptide	N	MS	Asp	Glu	Ile	Asp	Tyr	Leu	Gln	Asp	Biniossek et al., 2016
PITSLRE serine/threonine-protein kinase CDC2L1	P21127	1-795	peptide-Asp409+Ser-peptide	P		Tyr	Val	Pro	Asp	Ser	Pro	Ala	Leu	Beyaert et al., 1997	18924
plasma membrane calcium-transporting ATPase 2	Q01814	1-1243	peptide-Asp1117+His-peptide	P		Glu	Glu	Ile	Asp	His	Ala	Glu	Arg	Schwab et al., 2002
plasma membrane calcium-transporting ATPase 4	P23634	1-1241	peptide-Asp1080+His-peptide	P		Asp	Glu	Ile	Asp	His	Ala	Glu	Met	P�szty et al., 2002
poly [ADP-ribose] polymerase 1	P09874	2-1014	peptide-Asp214+Gly-peptide	P		Asp	Glu	Val	Asp	Gly	Val	Asp	Glu	Teraoka et al., 1996	17857
poly(ADP-ribose) glycohydrolase	Q86W56	1-976	peptide-Asp256+Val-peptide	P		Asp	Glu	Ile	Asp	Val	Val	Pro	Glu	Affar et al., 2001	19397
poly(ADP-ribose) glycohydrolase	Q86W56	1-976	peptide-Asp307+Asn-peptide	P		Met	Asp	Val	Asp	Asn	Ser	Lys	Asn	Affar et al., 2001	19398
polypyrimidine tract-binding protein 1	P26599	1-531	peptide-Asp139+Ser-peptide	P		Leu	Lys	Thr	Asp	Ser	Ser	Pro	Asn	Back et al., 2002	3811
polypyrimidine tract-binding protein 1	P26599	1-531	peptide-Asp172+Ala-peptide	P		Ala	Ala	Val	Asp	Ala	Gly	Met	Ala	Back et al., 2002	19897
polypyrimidine tract-binding protein 1	P26599	1-531	peptide-Asp7+Ile-peptide	P		Ile	Val	Pro	Asp	Ile	Ala	Val	Gly	Back et al., 2002	3810
Polypyrimidine tract-binding protein 1	P17225	1-527	Met-Asp2+Gly-Peptide	N	MS	-	-	Met	Asp	Gly	Ile	Val	Pro	Demon et al., 2009
Polypyrimidine tract-binding protein 1	P17225	1-527	Peptide-Asp171+Ala-Peptide	N	MS	Ala	Ala	Val	Asp	Ala	Gly	Met	Ala	Demon et al., 2009	3812
POTE ankyrin domain family member E	Q6S8J3	1-1075	peptide-Asp711+Asn-peptide	P	MS	Leu	Val	Ile	Asp	Asn	Gly	Ser	Gly	Demon et al., 2009
POTE ankyrin domain family member E	Q6S8J3	1-1075	peptide-Asp944+Gly-peptide	P	MS	Glu	Leu	Pro	Asp	Gly	Gln	Val	Ile	Demon et al., 2009
POTE ankyrin domain family member F	A5A3E0	1-1075	peptide-Asp711+Asn-peptide	P	MS	Leu	Val	Ile	Asp	Asn	Gly	Ser	Gly	Demon et al., 2009
POTE ankyrin domain family member F	A5A3E0	1-1075	peptide-Asp944+Gly-peptide	P	MS	Glu	Leu	Pro	Asp	Gly	Gln	Val	Ile	Demon et al., 2009
POTE ankyrin domain family member I	P0CG38	1-1075	peptide-Asp711+Asn-peptide	P	MS	Leu	Val	Ile	Asp	Asn	Gly	Ser	Gly	Demon et al., 2009
POTE ankyrin domain family member J	P0CG39	1-1038	peptide-Asp674+Asn-peptide	P	MS	Leu	Val	Ile	Asp	Asn	Gly	Ser	Gly	Demon et al., 2009
Pre-mRNA cleavage complex 2 protein Pcf11	O94913	1-1555	peptide-Asp413+Gly-peptide	P	MS	Asp	Lys	Thr	Asp	Gly	Lys	Asp	Asp	Impens et al., 2010
presenilin 1	P49768	1-467	peptide-Asp345+Ser-peptide	P		Ala	Gln	Arg	Asp	Ser	His	Leu	Gly	van de Craen et al., 1999	3804
presenilin 2	P49810	1-448	peptide-Asp326+Ser-peptide	P		Asp	Ser	Tyr	Asp	Ser	Phe	Gly	Glu	van de Craen et al., 1999	3813
PRKC apoptosis WT1 regulator protein	Q96IZ0	1-340	peptide-Asp131+Gly-peptide	P	MS	Glu	Glu	Pro	Asp	Gly	Val	Pro	Glu	Impens et al., 2010
PRKCQ	Q04759	1-706	peptide-Asp354+Lys-peptide	P		Asp	Glu	Val	Asp	Lys	Met	Cys	His	Datta et al., 1997	3754
PRKR-interacting protein 1	Q9H875	1-184	peptide-Asp97+Ala-peptide	P	MS	Asp	Tyr	Met	Asp	Ala	Met	Ala	Glu	Impens et al., 2010
Probable methyltransferase BCDIN3D	Q7Z5W3	1-292	peptide-Asp8+Gly-peptide	P	MS	Thr	Glu	Leu	Asp	Gly	Gly	Ser	Val	Impens et al., 2010
probable transcription factor PML	P29590	1-882	peptide-Asp523+Gly-peptide	P		Pro	His	Leu	Asp	Gly	Pro	Pro	Ser	Nervi et al., 1998	20017
procaspase 7	P55210	1-303	peptide-Asp23+Ala-peptide	P		Asp	Ser	Val	Asp	Ala	Lys	Pro	Asp	Yang etal, 1998	18052
proteasome activator complex subunit 3	P61289	1-254	peptide-Asp80+Gly-peptide	P		Asp	Gly	Leu	Asp	Gly	Pro	Thr	Tyr	Araya et al., 2002	3741
Protein ALO17	Q9HCF4	1-1550	peptide-Asp273+Ala-peptide	P	MS	Met	Ala	Val	Asp	Ala	Val	Ala	Glu	Impens et al., 2010
Protein FAM136A	Q9CR98	2-138	Peptide-Asp14+Ala-Peptide	N	MS	Glu	Ala	Val	Asp	Ala	Met	Val	Lys	Demon et al., 2009
protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha	P49354	1-379	peptide-Asp59+Ser-peptide	P		Val	Ser	Leu	Asp	Ser	Pro	Ser	Tyr	Kim et al., 2001	20032
protein kinase C delta type	Q05655	1-676	peptide-Asp329+Asn-peptide	P		Asp	Met	Gln	Asp	Asn	Ser	Gly	Thr	Ghayur et al., 1997	20567
protein kinase C delta type	P09215	1-673	peptide-Asp327+Asn-peptide	P	NT	Asp	Ile	Pro	Asp	Asn	Asn	Gly	Thr	Kanthasamy et al., 2006
Protein kinase C epsilon type	Q02156	1-737	Peptide-Asp451+Cys-Peptide	P	MU	Asp	Asp	Val	Asp	Cys	Thr	Met	Thr	Basu et al., 2002
Protein kinase C epsilon type	Q02156	1-737	Peptide-Asp383+Gly-Peptide	P	MU	Ser	Ser	Pro	Asp	Gly	Gln	Leu	Met	Basu et al., 2002
protein kinase C zeta type	Q05513	1-592	peptide-Asp210+Gly-peptide	P		Glu	Glu	Thr	Asp	Gly	Ile	Ala	Tyr	Smith et al., 2000	19388
protein kinase C zeta type	Q05513	1-592	peptide-Asp239+Gly-peptide	P		Asp	Gly	Met	Asp	Gly	Ile	Lys	Ile	Smith et al., 2000	19392
protein kinase N2	Q16513	1-984	peptide-Asp700+Ser-peptide	P		Asp	Glu	Val	Asp	Ser	Leu	Met	Cys	Koh et al., 2000	3841
protein kinase N2	Q16513	1-984	peptide-Asp117+Cys-peptide	P		Asp	Ile	Thr	Asp	Cys	Pro	Arg	Thr	Koh et al., 2000	3840
Protein KRI1 homolog	Q8N9T8	1-709	peptide-Asp312+Ser-peptide	P	MS	Glu	Glu	Pro	Asp	Ser	Ala	Ser	Val	Impens et al., 2010
Protein Mdm4	O15151	1-490	peptide-Asp361+Cys-peptide	P		Asp	Val	Pro	Asp	Cys	Arg	Arg	Thr	Gentiletti et al., 2002	3845
protein phosphatase 1 regulatory subunit 11	O60927	1-126	peptide-Asp49+Asn-peptide	P		Asp	Thr	Val	Asp	Asn	Glu	His	Met	Huang & Lee, 2008	20707
protein recA	P0A7G6	2-353	peptide-Asp121+Thr-peptide	N	MS	Ser	Gln	Pro	Asp	Thr	Gly	Glu	Gln	Timmer et al., 2009
protein translocase subunit secA	P10408	1-901	peptide-Asp212+Ser-peptide	N	MS	Asp	Glu	Val	Asp	Ser	Ile	Leu	Ile	Timmer et al., 2009
prothymosin alpha	P06454	2-111	peptide-Asp97+Asp-peptide	P		Asp	Asp	Glu	Asp	Asp	Asp	Val	Asp	Enkemann et al., 2000
prothymosin alpha	P06454	2-111	peptide-Asp98+Asp-peptide	P		Asp	Glu	Asp	Asp	Asp	Val	Asp	Thr	Enkemann et al., 2000
prothymosin alpha	P06454	2-111	peptide-Asp100+Thr-peptide	P		Asp	Asp	Val	Asp	Thr	Lys	Lys	Gln	Enkemann et al., 2000	3791
Prothymosin alpha	P06454	2-111	peptide-Asp7+Thr-peptide	P	MS	Ala	Ala	Val	Asp	Thr	Ser	Ser	Glu	Impens et al., 2010
proto-oncogene tyrosine-protein kinase Fyn	P06241	2-537	peptide-Asp19+Gly-peptide	P		Glu	Glu	Arg	Asp	Gly	Ser	Leu	Asn	Ricci et al., 1999	3760
proto-oncogene tyrosine-protein kinase receptor ret precursor	P07949	29-1114	peptide-Asp707+Ala-peptide	P		Val	Ser	Val	Asp	Ala	Phe	Lys	Ile	Bordeaux et al., 2000
proto-oncogene tyrosine-protein kinase receptor ret precursor	P07949	29-1114	peptide-Asp1017+Leu-peptide	P		Asp	Tyr	Leu	Asp	Leu	Ala	Ala	Ser	Bordeaux et al., 2000
PTEN	P60484	1-403	peptide-Asp301+Ser-peptide	P		Gln	Glu	Ile	Asp	Ser	Ile	Cys	Ser	Torres et al., 2003	18977
PTEN	P60484	1-403	peptide-Asp371+Asn-peptide	P		Asp	Val	Ser	Asp	Asn	Glu	Pro	Asp	Torres et al., 2003	18978
PTEN	P60484	1-403	peptide-Asp375+His-peptide	P		Asn	Glu	Pro	Asp	His	Tyr	Arg	Tyr	Torres et al., 2003	18979
PTEN	P60484	1-403	peptide-Asp384+Ser-peptide	P		Asp	Thr	Thr	Asp	Ser	Asp	Pro	Glu	Torres et al., 2003	18980
Putative beta-actin-like protein 3	Q9BYX7	1-375	peptide-Asp244+Gly-peptide	P	MS	Glu	Leu	Pro	Asp	Gly	Gln	Val	Ile	Demon et al., 2009
Putative E3 ubiquitin-protein ligase UBR7	Q8N806	2-425	peptide-Asp336+Thr-peptide	P	MS	Asp	Glu	Tyr	Asp	Thr	Val	Leu	Ala	Impens et al., 2010
putative uncharacterized protein	Q6PG47	28-44	VTD+AQIKNELLESEMK	N	MS	-	Val	Thr	Asp	Ala	Gln	Ile	Lys	Schilling & Overall, 2008
putative uncharacterized protein DKFZp686L22104	Q68E03	19-81	peptide-Asp68+Leu-peptide	N	MS	Asp	Glu	Thr	Asp	Leu	Ala	Asn	Leu	Schilling & Overall, 2008
Pyruvate kinase II	P21599	299-336	peptide-Asp313+Ala-peptide	N	MS	Asp	Gly	Thr	Asp	Ala	Val	Met	Leu	Biniossek et al., 2016
Pyruvate kinase isozymes M1/M2	P52480	2-531	Peptide-Asp354+Gly-Peptide	N	MS	Ala	Val	Leu	Asp	Gly	Ala	Asp	Cys	Demon et al., 2009
rab GTPase-binding effector protein 1	Q15276	1-862	peptide-Asp438+Phe-peptide	P		Asp	Glu	Ser	Asp	Phe	Gly	Pro	Leu	Cosulich et al., 1997	3793
rab GTPase-binding effector protein 1	Q15276	1-862	peptide-Asp379+Ala-peptide	P		His	Ser	Leu	Asp	Ala	Gly	Leu	Leu	Swanton et al., 2000	3792
RAC-alpha serine/threonine-protein kinase	P31749	1-480	peptide-Asp108+Gly-peptide	P		Thr	Val	Ala	Asp	Gly	Leu	Lys	Lys	Xu et al., 2002
RAC-alpha serine/threonine-protein kinase	P31749	1-480	peptide-Asp119+Phe-peptide	P		Glu	Glu	Met	Asp	Phe	Arg	Ser	Gly	Xu et al., 2002
RAC-alpha serine/threonine-protein kinase	P31749	1-480	peptide-Asp462+Ser-peptide	P		Glu	Cys	Val	Asp	Ser	Glu	Arg	Arg	Xu et al., 2002	3758
ras GTPase-activating protein 1	P20936	1-1047	peptide-Asp157+Ser-peptide	P		Asp	Glu	Gly	Asp	Ser	Leu	Asp	Gly	Wen et al., 1999	21101
ras GTPase-activating protein 1	P20936	1-1047	peptide-Asp455+Gly-peptide	P		Asp	Thr	Val	Asp	Gly	Lys	Glu	Ile	Wen et al., 1999	20988
ras GTPase-activating-like protein IQGAP1	P46940	1-25	peptide-Asp8+Gly-peptide	N	MS	Asp	Glu	Val	Asp	Gly	Leu	Gly	Val	Schilling & Overall, 2008
ras-related C3 botulinum toxin substrate 1	P63000	1-189	peptide-Asp121+Asp-peptide	P		Asp	Leu	Arg	Asp	Asp	Lys	Asp	Thr	Tu and Cerione, 2001
receptor tyrosine-protein kinase erbB-2	P04626	23-1255	peptide-Asp1016+Leu-peptide	P		Asp	Met	Gly	Asp	Leu	Val	Asp	Ala	Strohecker et al., 2008	20668
receptor tyrosine-protein kinase erbB-2	P04626	23-1255	peptide-Asp1019+Ala-peptide	P		Asp	Leu	Val	Asp	Ala	Glu	Glu	Tyr	Strohecker et al., 2008	20669
receptor tyrosine-protein kinase erbB-2	P04626	23-1255	peptide-Asp1125+Gly-peptide	P		Ser	Glu	Thr	Asp	Gly	Tyr	Val	Ala	Strohecker et al., 2008	20670
receptor tyrosine-protein kinase erbB-2	P04626	23-1255	peptide-Asp1087+Gly-peptide	P		Asp	Val	Phe	Asp	Gly	Asp	Leu	Gly	Strohecker et al., 2008	20671
retinoblastoma-associated protein	P06400	1-928	peptide-Asp349+Ser-peptide	P		Asp	Ser	Ile	Asp	Ser	Phe	Glu	Thr	Fattman et al., 2001	3789
retinoblastoma-associated protein	P33568	1-920	peptide-Asp857+Gly-peptide	P	CS	Asp	Glu	Ala	Asp	Gly	Ser	Lys	His	Lemaire et al., 2005
retinoblastoma-associated protein	P06400	1-928	peptide-Asp886+Gly-peptide	P	CS	Asp	Glu	Ala	Asp	Gly	Ser	Lys	His	Lemaire et al., 2005
rho GDP-dissociation inhibitor 2	P52566	2-201	peptide-Asp19+Ser-peptide	P		Asp	Glu	Leu	Asp	Ser	Lys	Leu	Asn	Danley et al., 1996	19279
rho-associated protein kinase 1	Q13464	1-1354	peptide-Asp1113+Gly-peptide	P		Asp	Glu	Thr	Asp	Gly	Asn	Leu	Pro	Sebbagh et al., 2001	19414
rho-related GTP-binding protein RhoC precursor	P08134	70-104	peptide-Asp90+Ser-peptide	N	MS	Asp	Ser	Pro	Asp	Ser	Leu	Glu	Asn	Schilling & Overall, 2008
Ribonucleases P/MRP protein subunit POP1	Q99575	1-1024	peptide-Asp774+Ala-peptide	P	MS	Glu	Val	Met	Asp	Ala	Gly	Cys	Gln	Impens et al., 2010
Ribose-phosphate pyrophosphokinase	P0A717	215-231	peptide-Asp224+Thr-peptide	N	MS	Asp	Met	Ile	Asp	Thr	Gly	Gly	Thr	Biniossek et al., 2016
Ribosome-recycling factor	P0A805	32-52	peptide-Asp38+Gly-peptide	N	MS	Ser	Leu	Leu	Asp	Gly	Ile	Val	Val	Biniossek et al., 2016
RING finger protein 219	Q5W0B1	1-726	peptide-Asp433+Ser-peptide	P	MS	Asp	Phe	Cys	Asp	Ser	Ser	Asn	Val	Impens et al., 2010
RNA chaperone ProQ	P45577	36-45	peptide-Asp44+Arg-peptide	N	MS	Asp	Leu	Val	Asp	Arg	Val	Ala	Gly	Biniossek et al., 2016
scaffold attachment factor B1	Q15424	253-285	peptide-Asp262+Ser-peptide	N	MS	Asp	Leu	Phe	Asp	Ser	Ala	His	Pro	Schilling & Overall, 2008
scaffold attachment factor B2	Q14151	110-163	peptide-Asp153+Gly-peptide	N	MS	Asp	Gly	Thr	Asp	Gly	Leu	Leu	Asp	Schilling & Overall, 2008
scaffold attachment factor B2	Q14151	252-284	peptide-Asp261+Ser-peptide	N	MS	Asp	Leu	Phe	Asp	Ser	Ala	His	Pro	Schilling & Overall, 2008
Schlafen family member 5	Q08AF3	1-891	peptide-Asp17+Ala-peptide	P	MS	Cys	Val	Val	Asp	Ala	Gly	Lys	Val	Impens et al., 2010
Secretogranin-3 precursor	Q8WXD2	1-468	peptide-Asp136+Gly-peptide	P		Asp	Asp	Pro	Asp	Gly	Leu	His	Gln	Ju et al., 2007	23569
Serine hydroxymethyltransferase	P0A825	381-401	peptide-Asp391+Ser-peptide	N	MS	Asp	Val	Leu	Asp	Ser	Ile	Asn	Asp	Biniossek et al., 2016
Serine hydroxymethyltransferase	P0A825	309-326	peptide-Asp325+Lys-peptide	N	MS	Asp	Leu	Val	Asp	Lys	Asn	Leu	Thr	Biniossek et al., 2016
serine-protein kinase ATM	Q13315	1-3056	peptide-Asp863+Ser-peptide	P		Asp	Tyr	Pro	Asp	Ser	Ser	Val	Ser	Smith et al., 1999	19245
serine-protein kinase ATM	Q13315	1-3056	peptide-Asp2916+Gly-peptide	P		Asp	Ile	Val	Asp	Gly	Met	Gly	Ile	Smith et al., 1999	19246
Serine/arginine repetitive matrix protein 2	Q9UQ35	1-2752	peptide-Asp1560+Ser-peptide	P	MS	Ser	Glu	Ser	Asp	Ser	Ser	Pro	Asp	Impens et al., 2010
Serine/arginine repetitive matrix protein 2	Q8BTI8	1-2703	Peptide-Asp1516+Ser-Peptide	N	MS	Ser	Glu	Ser	Asp	Ser	Ser	Pro	Asp	Demon et al., 2009
Serine/arginine repetitive matrix protein 2	Q8BTI8	1-2703	Peptide-Asp1502+Gly-Peptide	N	MS	Gln	Glu	Leu	Asp	Gly	Lys	Pro	Ser	Demon et al., 2009
Serine/arginine-rich splicing factor 1	Q07955	2-248	peptide-Asp175+Asn-peptide	P		Arg	Lys	Leu	Asp	Asn	Thr	Lys	Phe	Thiede et al., 2001
Serine/arginine-rich splicing factor 1	Q07955	2-248	peptide-Asp139+His-peptide	P		Asp	Leu	Lys	Asp	His	Met	Arg	Glu	Thiede et al., 2001
Serine/arginine-rich splicing factor 1	Q07955	2-248	peptide-Asp154+Gly-peptide	P		Val	Tyr	Arg	Asp	Gly	Thr	Gly	Val	Thiede et al., 2001
Serine/arginine-rich splicing factor 1	Q07955	2-248	peptide-Asp150+Val-peptide	P		Cys	Tyr	Ala	Asp	Val	Tyr	Arg	Asp	Thiede et al., 2001
serine/threonine-protein kinase 24	Q9Y6E0	1-443	peptide-Asp325+Gly-peptide	P		Ala	Glu	Thr	Asp	Gly	Gln	Ala	Ser	Johnston et al., 2000
serine/threonine-protein kinase 3	Q13188	1-491	peptide-Asp322+Ser-peptide	P		Asp	Glu	Leu	Asp	Ser	His	Thr	Met	Lee et al., 1998	3858
serine/threonine-protein kinase 4	Q13043	1-487	peptide-Asp326+Ser-peptide	P		Asp	Glu	Met	Asp	Ser	Gly	Thr	Met	Johnston et al., 2000	3851
serine/threonine-protein kinase 4	Q13043	1-487	peptide-Asp349+Gly-peptide	P		Thr	Met	Thr	Asp	Gly	Ala	Asn	Thr	Johnston et al., 2000	3856
serine/threonine-protein kinase D1	Q62101	1-918	peptide-Asp397+Ser-peptide	P		Asp	Gln	Glu	Asp	Ser	Asn	Arg	Thr	Vantus et al., 2004
serine/threonine-protein kinase D1	Q62101	1-918	peptide-Asp355+Ser-peptide	P		Asp	Asp	Asn	Asp	Ser	Glu	Arg	Asn	Vantus et al., 2004
serine/threonine-protein kinase DCAMKL1	Q9JLM8	1-756	peptide-Asp369+Gly-peptide	P		Asp	Glu	Asn	Asp	Gly	Pro	Gly	Glu	Kruidering et al., 2001	18911
serine/threonine-protein kinase DCLK1	O15075	1-740	peptide-Asp369+Gly-peptide	P		Asp	Glu	Asn	Asp	Gly	Pro	Gly	Glu	Kruidering et al., 2001
serine/threonine-protein kinase MST4	Q9P289	1-416	peptide-Asp305+Ser-peptide	P		Asp	Glu	Ser	Asp	Ser	Glu	Gly	Ser	Johnston et al., 2000	19440
serine/threonine-protein kinase N1	Q16512	1-942	peptide-Asp454+Asn-peptide	P		Asp	Phe	Leu	Asp	Asn	Glu	Arg	His	Takahashi et al., 1998	3818
serine/threonine-protein kinase N1	Q16512	1-942	peptide-Asp558+Ser-peptide	P		Leu	Gly	Thr	Asp	Ser	Asp	Ser	Ser	Takahashi et al., 1998	3819
serine/threonine-protein kinase N1	Q16512	1-942	peptide-Asp560+Ser-peptide	P		Thr	Asp	Ser	Asp	Ser	Ser	Pro	Gln	Takahashi et al., 1998	3820
serine/threonine-protein kinase N1	Q16512	1-942	peptide-Asp108+Gly-peptide	P		Ala	Thr	His	Asp	Gly	Pro	Gln	Ser	Takahashi et al., 1998	3817
serine/threonine-protein kinase PAK 2	Q13177	1-524	peptide-Asp212+Gly-peptide	P		Ser	His	Val	Asp	Gly	Ala	Ala	Lys	Walter et al., 1998	3766
serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform	P30153	2-589	peptide-Asp218+Ser-peptide	P		Asp	Glu	Gln	Asp	Ser	Val	Arg	Leu	Santoro et al., 1998	20924
serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform	Q08209	1-521	peptide-Asp385+Gly-peptide	P		Asp	Gly	Phe	Asp	Gly	Ala	Thr	Ala	Mukerjee et al., 2000
serpin A3-1	Q9TTE1	25-411	peptide-Asp395+Thr-peptide	P	MU	Val	Leu	Lys	Asp	Thr	Gln	Ser	Ile	Herrera-Mendez et al., 2009
serum response factor	P11831	1-508	peptide-Asp254+Ser-peptide	P		Ser	Glu	Ser	Asp	Ser	Ser	Gly	Glu	Drewett et al., 2001	3756
serum response factor	P11831	1-508	peptide-Asp245+Leu-peptide	P	MU	Glu	Glu	Thr	Asp	Leu	Thr	Tyr	Gln	Chang et al., 2003	22597
seryl-tRNA synthetase	P0A8L1	1-430	peptide-Asp228+Thr-peptide	N	MS	Glu	Glu	Ala	Asp	Thr	Ser	Asn	Tyr	Timmer et al., 2009
seryl-tRNA synthetase, cytoplasmic	P49591	2-514	peptide-Asp513+Ala-peptide	P		Glu	Val	Thr	Asp	Ala	Gly	Gly	Gly	Casas et al., 2001	19419
Signal recognition particle 54 kDa protein	P61011	1-504	peptide-Asp391+Gly-peptide	P	MS	Asp	Ser	Thr	Asp	Gly	Ala	Lys	Val	Impens et al., 2010
signal recognition particle 72 kDa protein	O76094	2-671	peptide-Asp614+Ala-peptide	P		Ser	Glu	Leu	Asp	Ala	Ser	Lys	Thr	Utz et al., 1998	19380
signal transducer and activator of transcription 1-alpha/beta	P42224	1-750	peptide-Asp694+Gly-peptide	P		Met	Glu	Leu	Asp	Gly	Pro	Lys	Gly	King & Goodbourn, 1998	20021
similar to RIKEN cDNA 4732495G21 gene	Q562R1	242-255	LPD+GQVITIGNER	N	MS	-	Leu	Pro	Asp	Gly	Gln	Val	Ile	Schilling & Overall, 2008
similar to Ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial	A4D1R5	26-45	GLDVD+SLVIEHIQVNKAPK	N	MS	Leu	Asp	Val	Asp	Ser	Leu	Val	Ile	Schilling & Overall, 2008
Sjoegren syndrome/scleroderma autoantigen 1	O60232	2-199	peptide-Asp55+Cys-peptide	P	MS	Thr	Cys	Ala	Asp	Cys	Gly	Thr	Ile	Impens et al., 2010
SLC4A1	P02730	1-911	peptide-Asp45+Tyr-peptide	P		Thr	Ala	Thr	Asp	Tyr	His	Thr	Thr	Mandal et al., 2003	18846
SLC4A1	P02730	1-911	peptide-Asp205+Gly-peptide	P		Glu	Gln	Gly	Asp	Gly	Gly	Thr	Glu	Mandal et al., 2003	18847
small nuclear ribonucleoprotein F	P62306	30-65	peptide-Asp52+Gly-peptide	N	MS	Glu	Tyr	Ile	Asp	Gly	Ala	Leu	Ser	Schilling & Overall, 2008
Soluble pyridine nucleotide transhydrogenase	P27306	119-141	peptide-Asp131+Gly-peptide	N	MS	Asp	Cys	Pro	Asp	Gly	Ser	Val	Glu	Biniossek et al., 2016
SP1	P08047	1-785	peptide-Asp590+Ala-peptide	P		Asn	Ser	Pro	Asp	Ala	Gln	Pro	Gln	Rickers et al., 1999	3794
spectrin alpha chain, brain	Q13813	1-2472	peptide-Asp1185+Ser-peptide	P		Asp	Glu	Thr	Asp	Ser	Lys	Thr	Ala	Nath et al., 1996	18325
spectrin alpha chain, brain	Q13813	1-2472	peptide-Asp1478+Ser-peptide	P		Asp	Ser	Leu	Asp	Ser	Val	Glu	Ala	Wang et al., 1998	22652
spectrin beta chain, brain 1	Q01082	1-2364	peptide-Asp1457+Ser-peptide	P		Asp	Glu	Val	Asp	Ser	Lys	Arg	Leu	Wang et al., 1998	19873
spectrin beta chain, brain 1	Q01082	1-2364	peptide-Asp2146+Thr-peptide	P		Glu	Thr	Val	Asp	Thr	Ser	Glu	Met	Wang et al., 1998	19874
Splicing factor U2AF 65 kDa subunit	P26369	2-475	Peptide-Asp128+Gly-Peptide	N	MS	Met	Thr	Pro	Asp	Gly	Leu	Ala	Val	Demon et al., 2009
splicing factor, arginine/serine-rich 9	Q13242	1-221	peptide-Asp6+Glu-peptide	P		Gly	Trp	Ala	Asp	Glu	Arg	Gly	Gly	Thiede et al., 2001
Stathmin	P54227	2-149	Peptide-Asp34+Phe-Peptide	N	MS	Ser	Val	Pro	Asp	Phe	Pro	Leu	Ser	Demon et al., 2009
STE20/SPS1-related proline-alanine-rich protein kinase	Q9UEW8	1-545	peptide-Asp390+Glu-peptide	P		Asp	Glu	Met	Asp	Glu	Lys	Ser	Glu	Johnston et al., 2000
sterol regulatory element binding protein-2	Q12772	1-1141	peptide-Asp468+Ser-peptide	N		Asp	Glu	Pro	Asp	Ser	Pro	Pro	Val	Wang et al., 1995	16239
succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial precursor	P31040	600-615	IDEYD+YSKPIQGQQK	N	MS	Asp	Glu	Tyr	Asp	Tyr	Ser	Lys	Pro	Schilling & Overall, 2008
Sulfate transporter CysZ	P0A6J3	115-130	peptide-Ala118+Thr-peptide	N	MS	Leu	Thr	Gly	Ala	Thr	Pro	Pro	Asp	Biniossek et al., 2016
sulfite reductase [NADPH] hemoprotein beta-component	P17846	2-570	peptide-Asp38+Gly-peptide	N	MS	Asp	Leu	Asn	Asp	Gly	Leu	Thr	Gly	Timmer et al., 2009
synphilin-1	Q9Y6H5	1-919	peptide-Asp454+Gln-peptide	P	MU	Asp	Glu	Val	Asp	Gln	Asp	Gly	Asn	Giaime et al., 2006	20020
syntaxin-5	Q08851	1-355	peptide-Asp209+Ser-peptide	P	MU	Asp	Glu	Gln	Asp	Ser	Tyr	Ile	Gln	Lowe et al., 2004	20733
T-cell acute lymphocytic leukemia 1	P17542	1-331	peptide-Asp180+Gly-peptide	P		Glu	Ile	Thr	Asp	Gly	Pro	His	Thr	Zeuner et al., 2003	20381
T-cell acute lymphocytic leukemia 1	P17542	1-331	peptide-Asp296+Gly-peptide	P		Ser	Ser	Leu	Asp	Gly	Ala	Ala	Ser	Zeuner et al., 2003	20382
T-cell surface glycoprotein CD3 zeta chain precursor	P20963	22-164	peptide-Asp28+Pro-peptide	P		Gly	Leu	Leu	Asp	Pro	Lys	Leu	Cys	Gastman et al., 1999
T-cell surface glycoprotein CD3 zeta chain precursor	P20963	22-164	peptide-Asp36+Gly-peptide	P		Tyr	Leu	Leu	Asp	Gly	Ile	Leu	Phe	Gastman et al., 1999
T-cell surface glycoprotein CD3 zeta chain precursor	P20963	22-164	peptide-Asp154+Ala-peptide	P		Asp	Thr	Tyr	Asp	Ala	Leu	His	Met	Gastman et al., 1999
T-complex protein 1 subunit delta	P50991	2-539	peptide-Asp261+Asn-peptide	P	MS	Thr	Asp	Met	Asp	Asn	Gln	Ile	Val	Impens et al., 2010
T-lymphoma invasion and metastasis-inducing protein 1	Q13009	2-1591	peptide-Asp993+His-peptide	P		Asp	Glu	Thr	Asp	His	Ser	Ser	Lys	Qi et al., 2001	20358
TAR DNA-binding protein 43	Q13148	1-414	peptide-Asp89+Ala-peptide	P	MS	Asp	Glu	Thr	Asp	Ala	Ser	Ser	Ala	Impens et al., 2010
TAR DNA-binding protein 43	Q13148	1-414	Peptide-Asp169+Gly-Peptide	P	MU	His	Met	Ile	Asp	Gly	Arg	Trp	Cys	Suzuki et al., 2011
TAR DNA-binding protein 43	Q921F2	1-414	Peptide-Asp89+Ala-Peptide	N	MS	Asp	Glu	Thr	Asp	Ala	Ser	Ser	Ala	Demon et al., 2009
TATA-binding protein-associated factor 2N	Q92804	1-592	peptide-Asp109+Tyr-peptide	P	MU	Asp	Gln	Pro	Asp	Tyr	Gly	Gln	Gln	Alves et al., 2009
tensin	Q04205	1-1744	peptide-Asp1237+Gly-peptide	P		Asp	Tyr	Pro	Asp	Gly	Arg	Gly	Gly	Kook et al., 2004
tensin-4 precursor	Q8IZW8	19-715	peptide-Asp570+Ser-peptide	P		Asp	Ser	Thr	Asp	Ser	Pro	Ala	Ser	Lo & Lo, 2005	17864
Thimet oligopeptidase	P52888	2-689	peptide-Asp13+Ala-peptide	P	MS	Asp	Met	Ala	Asp	Ala	Ala	Ser	Pro	Impens et al., 2010
TNF receptor-associated factor 1	Q13077	1-416	peptide-Asp163+Cys-peptide	P		Leu	Glu	Val	Asp	Cys	Tyr	Arg	Ala	Irmler et al., 2000	3866
TNF receptor-associated factor 3	Q13114	1-568	peptide-Asp348+Ser-peptide	P		Glu	Glu	Ala	Asp	Ser	Met	Lys	Ser	Lee et al., 2001	18967
TNF receptor-associated factor 3	Q13114	1-568	peptide-Asp368+Lys-peptide	P		Glu	Ser	Val	Asp	Lys	Ser	Ala	Gly	Lee et al., 2001	18968
transcription factor AP-2 alpha	P05549	1-437	peptide-Asp19+Gly-peptide	P		Asp	Arg	His	Asp	Gly	Thr	Ser	Asn	Nyormoi et al., 2001	3865
transcription factor BTF3	P20290	1-206	peptide-Asp175+Gly-peptide	P		Gln	Ser	Val	Asp	Gly	Lys	Ala	Pro	Thiede et al., 2001
transcription factor p65	Q04206	1-551	peptide-Asp97+Gly-peptide	P		Asp	Cys	Arg	Asp	Gly	Phe	Tyr	Glu	Kang et al., 2001	19477
Transcription intermediary factor 1-beta	Q13263	2-835	peptide-Asp688+Ser-peptide	P	MS	Asp	Gly	Ala	Asp	Ser	Thr	Gly	Val	Impens et al., 2010
transforming protein RhoA	P61586	70-104	peptide-Asp90+Ser-peptide	N	MS	Asp	Ser	Pro	Asp	Ser	Leu	Glu	Asn	Schilling & Overall, 2008
transitional endoplasmic reticulum ATPase	P55072	2-806	peptide-Asp307+Ala-peptide	P		Asp	Glu	Leu	Asp	Ala	Ile	Ala	Pro	Jang et al., 2008
transitional endoplasmic reticulum ATPase	P55072	2-806	peptide-Asp580+Ser-peptide	P		Asp	Glu	Leu	Asp	Ser	Ile	Ala	Lys	Jang et al., 2008
Treacle protein	Q13428	1-1488	peptide-Asp1242+Gly-peptide	P	MS	Asp	Asp	Pro	Asp	Gly	Lys	Gln	Glu	Impens et al., 2010
troponin T, cardiac muscle	P45379	2-298	peptide-Asp98+Asp-peptide	P		Val	Asp	Phe	Asp	Asp	Ile	His	Arg	Communal et al., 2002	19273
Tryptophanase	P0A853	335-366	peptide-Asp343+Gly-peptide	N	MS	Tyr	Leu	Val	Asp	Gly	Leu	Glu	Glu	Biniossek et al., 2016
tubulin beta chain	P07437	103-122	GHYTEGAELVD+SVLDVVRK	N	MS	Glu	Leu	Val	Asp	Ser	Val	Leu	Asp	Schilling & Overall, 2008
tubulin beta-2A chain	Q13885	103-122	GHYTEGAELVD+SVLDVVRK	N	MS	Glu	Leu	Val	Asp	Ser	Val	Leu	Asp	Schilling & Overall, 2008
tubulin beta-2B chain	Q9BVA1	103-122	GHYTEGAELVD+SVLDVVRK	N	MS	Glu	Leu	Val	Asp	Ser	Val	Leu	Asp	Schilling & Overall, 2008
tubulin beta-2C chain	P68371	103-122	GHYTEGAELVD+SVLDVVRK	N	MS	Glu	Leu	Val	Asp	Ser	Val	Leu	Asp	Schilling & Overall, 2008
tubulin beta-3 chain	Q13509	103-122	GHYTEGAELVD+SVLDVVRK	N	MS	Glu	Leu	Val	Asp	Ser	Val	Leu	Asp	Schilling & Overall, 2008
Tubulin beta-4A chain	P04350	104-122	GHYTEGAELVD+AVLDVVRK	N	MS	Glu	Leu	Val	Asp	Ala	Val	Leu	Asp	Schilling & Overall, 2008
tubulin, beta, 4 variant	Q53G92	103-122	GHYTEGAELVD+SVLDVVRK	N	MS	Glu	Leu	Val	Asp	Ser	Val	Leu	Asp	Schilling & Overall, 2008
type I restriction enzyme EcoKI M protein	P08957	1-529	peptide-Asp200+Gly-peptide	N	MS	Asp	Asp	Leu	Asp	Gly	Asp	Thr	Gln	Timmer et al., 2009
Type-1 fimbrial protein, A chain	P04128	37-61	peptide-Asp47+Ala-peptide	N	MS	Cys	Ala	Val	Asp	Ala	Gly	Ser	Val	Biniossek et al., 2016
Type-1 fimbrial protein, A chain	P04128	92-129	peptide-Asp102+Ala-peptide	N	MS	Thr	Ala	Ile	Asp	Ala	Gly	His	Thr	Biniossek et al., 2016
tyrosine-protein kinase ABL1	P00519	1-1130	peptide-Asp546+Val-peptide	P		Asp	Thr	Thr	Asp	Val	Pro	Glu	Met	Machuy et al., 2004	20918
tyrosine-protein kinase Lyn	P07948	2-512	peptide-Asp18+Leu-peptide	P		Asp	Gly	Val	Asp	Leu	Lys	Thr	Gln	Luciano et al., 2001	3827
tyrosine-protein phosphatase non-receptor type 12	P35831	1-775	peptide-Asp552+Gly-peptide	P	MU	Asp	Ser	Pro	Asp	Gly	Lys	Ser	Pro	Halle et al., 2007
U1 small nuclear ribonucleoprotein 70 kDa	P08621	1-437	peptide-Asp341+peptide	P		Asp	Gly	Pro	Asp	Gly	Pro	Glu	Glu	Teraoka et al., 1996	16240
U6 snRNA-associated Sm-like protein LSm3	P62310	2-102	peptide-Asp6+Gln-peptide	P	MS	Asp	Asp	Val	Asp	Gln	Gln	Gln	Thr	Impens et al., 2010
Ubiquitin carboxyl-terminal hydrolase 1	O94782	1-785	peptide-Asp41+Ser-peptide	P	MS	Asp	Phe	Thr	Asp	Ser	Gln	Glu	Asn	Impens et al., 2010
Ubiquitin carboxyl-terminal hydrolase 5	P56399	2-858	Peptide-Asp767+Ala-Peptide	N	MS	Asp	Asp	Leu	Asp	Ala	Glu	Ala	Ala	Demon et al., 2009
ubiquitin conjugation factor E4 B	O95155	1-1302	peptide-Asp109+Gly-peptide	N		Met	Asp	Ile	Asp	Gly	Val	Ser	Cys	Mahoney et al., 2002	16241
ubiquitin-protein ligase E3 Mdm2	Q00987	1-491	peptide-Asp361+Cys-peptide	P		Asp	Val	Pro	Asp	Cys	Lys	Lys	Thr	Erhardt et al., 1997	19954
Uncharacterized oxidoreductase YgjR	P42599	95-111	peptide-Asp104+Ala-peptide	N	MS	Ala	Glu	Val	Asp	Ala	Ala	Ile	Ala	Biniossek et al., 2016
Uncharacterized protein C17orf56	Q96N21	1-525	peptide-Asp192+Ser-peptide	P	MS	Asp	Glu	Leu	Asp	Ser	Gly	Pro	Ser	Impens et al., 2010
uncharacterized protein yeiA	P25889	1-411	peptide-Asp356+Gly-peptide	N	MS	Ser	Cys	Tyr	Asp	Gly	Gly	His	Gln	Timmer et al., 2009
uncharacterized protein yfeX	P76536	1-299	peptide-Asp165+Ala-peptide	N	MS	Asp	Gly	Val	Asp	Ala	Gly	Gly	Ser	Timmer et al., 2009
uncharacterized protein yfeX	P76536	1-299	peptide-Asp206+Gly-peptide	N	MS	Glu	Glu	Ile	Asp	Gly	Asp	Glu	Arg	Timmer et al., 2009
uncharacterized protein yffQ	P76548	1-125	peptide-Asp19+Val-peptide	N	MS	Cys	Phe	Ala	Asp	Val	Gly	Asp	Tyr	Timmer et al., 2009
Uncharacterized transporter YebQ	P76269	406-449	peptide-Ala435+Ala-peptide	N	MS	Leu	Met	Ala	Ala	Ala	Ile	Leu	Ala	Biniossek et al., 2016
UPF0325 protein yaeH	P62768	1-128	peptide-Asp60+Gly-peptide	N	MS	Val	Val	Ala	Asp	Gly	Val	Gly	Gln	Timmer et al., 2009
UPF0381 protein yfcZ	P0AD33	1-94	peptide-Asp16+Val-peptide	N	MS	Cys	Cys	Met	Asp	Val	Gly	Thr	Ile	Timmer et al., 2009
UPF0568 protein C14orf166	Q9Y224	185-205	HILGFDTGD+AVLNEAAQILR	N	MS	Asp	Thr	Gly	Asp	Ala	Val	Leu	Asn	Schilling & Overall, 2008
V-type proton ATPase catalytic subunit A	P50516	1-617	Peptide-Asp299+Gly-Peptide	N	MS	Met	Glu	Val	Asp	Gly	Lys	Val	Glu	Demon et al., 2009
V-type proton ATPase subunit E 1	P50518	2-226	Peptide-Asp31+Ala-Peptide	N	MS	Glu	Glu	Ile	Asp	Ala	Lys	Ala	Glu	Demon et al., 2009
V-type proton ATPase subunit E 2	Q9D593	1-226	peptide-Asp31+Ala-peptide	P	MS	Glu	Glu	Ile	Asp	Ala	Lys	Ala	Glu	Demon et al., 2009
V-type proton ATPase subunit H	Q8BVE3	1-483	Peptide-Asp11+Ala-Peptide	N	MS	Gly	Ala	Val	Asp	Ala	Ala	Val	Pro	Demon et al., 2009
Valine--tRNA ligase	P07118	560-580	peptide-Asp570+Gly-peptide	N	MS	Asp	Met	Val	Asp	Gly	Ile	Ser	Leu	Biniossek et al., 2016
vav proto-oncogene	P15498	1-845	peptide-Asp161+Cys-peptide	P		Asp	Leu	Tyr	Asp	Cys	Val	Glu	Asn	Hofmann et al., 2000	18966
vav proto-oncogene	P15498	1-845	peptide-Asp150+Asp-peptide	P		Asp	Gln	Ile	Asp	Asp	Thr	Val	Glu	Hofmann et al., 2000	18965
vimentin	P08670	2-466	peptide-Asp84+Phe-peptide	P		Asp	Ser	Val	Asp	Phe	Ser	Leu	Ala	Byun et al., 2001	3785
vimentin	P08670	321-342	peptide-Asp331+Ala-peptide	N	MS	Cys	Glu	Val	Asp	Ala	Leu	Lys	Gly	Schilling & Overall, 2008
vimentin	P08670	424-439	ETNLD+SLPLVDTHSK	N	MS	Thr	Asn	Leu	Asp	Ser	Leu	Pro	Leu	Schilling & Overall, 2008
Vimentin	P20152	2-466	Peptide-Asp85+Phe-Peptide	N	MS	Asp	Ser	Val	Asp	Phe	Ser	Leu	Ala	Demon et al., 2009
WASH complex subunit FAM21	Q6PGL7	1-1334	Peptide-Asp668+Leu-Peptide	N	MS	Asp	Glu	Val	Asp	Leu	Phe	Ala	Ile	Demon et al., 2009
WW domain-binding protein 11	Q923D5	1-641	Peptide-Asp297+Asn-Peptide	N	MS	Ser	Glu	Arg	Asp	Asn	Thr	Glu	Glu	Demon et al., 2009
Xanthine permease XanQ	P67444	109-143	peptide-Leu131+Val-peptide	N	MS	Gly	Ala	Phe	Leu	Val	Val	Gly	Ser	Biniossek et al., 2016
Z-Asp-Glu-Val-Asp-aminoluciferin			Z-Asp-Glu-Val-Asp+aminoluciferin	S		Asp	Glu	Val	Asp	Luc	-	-	-
Zinc finger C3H1 domain-containing protein	O60293	1-1989	peptide-Asp335+Ser-peptide	P	MS	Asp	Thr	Thr	Asp	Ser	Ser	Gln	Gly	Impens et al., 2010