Substrates for peptidase M12.033: LAST_MAM peptidase (Limulus-type)

Summary Alignment Tree Sequences Sequence features Distribution Literature Substrates

Peptide and protein substrates that are thought to be physiologically relevant are indicated by P. Peptide and protein substrates that are thought to be pathologically relevant are indicated by D. Peptide and protein substrates that are not physiologically relevant are indicated by N. Synthetic substrates are indicated by S. Click on the symbol to show only physiological, non-physiological or synthetic substrates, or here to display all substrates. How cleavage sites have been identified are indicated by the following evidence codes: NT = N-terminal sequencing, MS = mass spectroscopy, MU = mutation, CS = consensus sequence, LC = liquid chromatography. To see all annotated cleavages for a protein substrate, click on the UniProt Accession.

Substrate	Uniprot	Residue range	Cleavage Site	Cleavage type	Evidence	P4	P3	P2	P1	P1'	P2'	P3'	P4'	Reference
116 kDa U5 small nuclear ribonucleoprotein component	Q15029	951-963	Lys-Phe-Phe-Asp954+Asp-Peptide	N	MS	Lys	Phe	Phe	Asp	Asp	Pro	Met	Leu	Becker-Pauly et al., 2011
14 kDa phosphohistidine phosphatase	Q9NRX4	94-108	Ser-Met-Ala-Tyr97+Gly-Peptide	N	MS	Ser	Met	Ala	Tyr	Gly	Pro	Ala	Gln	Becker-Pauly et al., 2011
14-3-3 protein epsilon	P62258	1-12	Met-Asp2+Asp-Peptide	N	MS	-	-	Met	Asp	Asp	Arg	Glu	Asp	Becker-Pauly et al., 2011
14-3-3 protein zeta/delta	P63104	145-158	Ser-Gln-Gln-Ala148+Tyr-Peptide	N	MS	Ser	Gln	Gln	Ala	Tyr	Gln	Glu	Ala	Becker-Pauly et al., 2011
26S proteasome non-ATPase regulatory subunit 2	Q13200	16-31	Ser-Pro-Ala-Ala19+Ala-Peptide	N	MS	Ser	Pro	Ala	Ala	Ala	Pro	Gly	Gly	Becker-Pauly et al., 2011
26S proteasome non-ATPase regulatory subunit 7	P51665	164-177	Ala-Glu-Glu-Ala167+Glu-Peptide	N	MS	Ala	Glu	Glu	Ala	Glu	Glu	Val	Gly	Becker-Pauly et al., 2011
3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase	Q15125	2-17	Thr-Thr-Asn-Ala5+Gly-Peptide	N	MS	Thr	Thr	Asn	Ala	Gly	Pro	Leu	His	Becker-Pauly et al., 2011
40S ribosomal protein S11	P62280	120-136	Val-Gln-Ile-Gly123+Asp-Peptide	N	MS	Val	Gln	Ile	Gly	Asp	Ile	Val	Thr	Becker-Pauly et al., 2011
40S ribosomal protein S14	P62263	69-84	Ser-Ser-Pro-Tyr72+Ala-Peptide	N	MS	Ser	Ser	Pro	Tyr	Ala	Ala	Met	Leu	Becker-Pauly et al., 2011
40S ribosomal protein S21	P63220	31-45	Ser-Ile-Gln-Met34+Asn-Peptide	N	MS	Ser	Ile	Gln	Met	Asn	Val	Ala	Glu	Becker-Pauly et al., 2011
40S ribosomal protein S26	P62854	102-115	Arg-Pro-Ala-Gly105+Ala-Peptide	N	MS	Arg	Pro	Ala	Gly	Ala	Ala	Pro	Arg	Becker-Pauly et al., 2011
40S ribosomal protein S3a	P61247	200-213	Ala-Cys-Gln-Ser203+IIe-Peptide	N	MS	Ala	Cys	Gln	Ser	Ile	Tyr	Pro	Leu	Becker-Pauly et al., 2011
40S ribosomal protein S4, X isoform	P62701	84-100	Ala-Gly-Phe-Met87+Asp-Peptide	N	MS	Ala	Gly	Phe	Met	Asp	Val	Ile	Ser	Becker-Pauly et al., 2011
40S ribosomal protein S7	P62081	128-142	Ala-Ile-Leu-Glu131+Asp-Peptide	N	MS	Ala	Ile	Leu	Glu	Asp	Leu	Val	Phe	Becker-Pauly et al., 2011
40S ribosomal protein SA	P08865	140-155	Val-Asn-Leu-Pro143+Thr-Peptide	N	MS	Val	Asn	Leu	Pro	Thr	Ile	Ala	Leu	Becker-Pauly et al., 2011
6-phosphogluconate dehydrogenase, decarboxylating	P52209	168-184	Glu-Pro-Cys-Cys171+Asp-Peptide	N	MS	Glu	Pro	Cys	Cys	Asp	Trp	Val	Gly	Becker-Pauly et al., 2011
6-phosphogluconate dehydrogenase, decarboxylating	P52209	271-288	Ala-Leu-Glu-Tyr274+Gly-Peptide	N	MS	Ala	Leu	Glu	Tyr	Gly	Val	Pro	Val	Becker-Pauly et al., 2011
6-phosphogluconolactonase	O95336	222-235	Asn-Pro-Leu-Pro225+Ala-Peptide	N	MS	Asn	Pro	Leu	Pro	Ala	Ala	Leu	Val	Becker-Pauly et al., 2011
60 kDa heat shock protein, mitochondrial	P10809	375-389	Ile-Glu-Gln-Leu378+Asp-Peptide	N	MS	Ile	Glu	Gln	Leu	Asp	Val	Thr	Thr	Becker-Pauly et al., 2011
60 kDa heat shock protein, mitochondrial	P10809	45-58	Asp-Leu-Leu-Ala48+Asp-Peptide	N	MS	Asp	Leu	Leu	Ala	Asp	Ala	Val	Ala	Becker-Pauly et al., 2011
60 kDa heat shock protein, mitochondrial	P10809	323-344	Ala-Val-Phe-Gly326+Glu-Peptide	N	MS	Ala	Val	Phe	Gly	Glu	Glu	Gly	Leu	Becker-Pauly et al., 2011
60 kDa heat shock protein, mitochondrial	P10809	324-344	Val-Phe-Gly-Glu327+Glu-Peptide	N	MS	Val	Phe	Gly	Glu	Glu	Gly	Leu	Thr	Becker-Pauly et al., 2011
60 kDa heat shock protein, mitochondrial	P10809	430-446	Ala-Ala-Val-Glu433+Glu-Peptide	N	MS	Ala	Ala	Val	Glu	Glu	Gly	Ile	Val	Becker-Pauly et al., 2011
60 kDa heat shock protein, mitochondrial	P10809	205-218	Lys-Thr-Leu-Asn208+Asp-Peptide	N	MS	Lys	Thr	Leu	Asn	Asp	Glu	Leu	Glu	Becker-Pauly et al., 2011
60 kDa heat shock protein, mitochondrial	P10809	144-157	Val-Met-Leu-Ala147+Val-Peptide	N	MS	Val	Met	Leu	Ala	Val	Asp	Ala	Val	Becker-Pauly et al., 2011
60 kDa heat shock protein, mitochondrial	P10809	500-516	Glu-Val-Gly-Tyr503+Asp-Peptide	N	MS	Glu	Val	Gly	Tyr	Asp	Ala	Met	Ala	Becker-Pauly et al., 2011
60S acidic ribosomal protein P1	P05386	16-33	Leu-His-Asp-Asp19+Glu-Peptide	N	MS	Leu	His	Asp	Asp	Glu	Val	Thr	Val	Becker-Pauly et al., 2011
60S acidic ribosomal protein P2	P05387	77-94	Pro-Gly-Ser-Ala80+Ala-Peptide	N	MS	Pro	Gly	Ser	Ala	Ala	Pro	Ala	Ala	Becker-Pauly et al., 2011
60S ribosomal protein L10	P27635	54-69	Ser-Asp-Glu-Tyr57+Glu-Peptide	N	MS	Ser	Asp	Glu	Tyr	Glu	Gln	Leu	Ser	Becker-Pauly et al., 2011
60S ribosomal protein L10a	P62906	105-118	Lys-Lys-Tyr-Asp108+Ala-Peptide	N	MS	Lys	Lys	Tyr	Asp	Ala	Phe	Leu	Ala	Becker-Pauly et al., 2011
60S ribosomal protein L11	P62913	2-13	Ala-Gln3+Asp-Peptide	N	MS	-	-	Ala	Gln	Asp	Gln	Gly	Glu	Becker-Pauly et al., 2011
60S ribosomal protein L23	P62829	50-77	Asn-Arg-Leu-Pro53+Ala-Peptide	N	MS	Asn	Arg	Leu	Pro	Ala	Ala	Gly	Val	Becker-Pauly et al., 2011
60S ribosomal protein L27	P61353	35-51	Asp-Arg-Pro-Tyr38+Ser-Peptide	N	MS	Asp	Arg	Pro	Tyr	Ser	His	Ala	Leu	Becker-Pauly et al., 2011
60S ribosomal protein L29	P47914	134-149	Lys-Ala-Gln-Ala137+Ala-Peptide	N	MS	Lys	Ala	Gln	Ala	Ala	Ala	Pro	Ala	Becker-Pauly et al., 2011
60S ribosomal protein L29	P47914	135-149	Ala-Gln-Ala-Ala138+Ala-Peptide	N	MS	Ala	Gln	Ala	Ala	Ala	Pro	Ala	Ser	Becker-Pauly et al., 2011
60S ribosomal protein L3	P39023	320-334	Phe-Val-His-Tyr323+Gly-Peptide	N	MS	Phe	Val	His	Tyr	Gly	Glu	Val	Thr	Becker-Pauly et al., 2011
60S ribosomal protein L4	P36578	127-140	Ala-Leu-Ala-Ala130+Ser-Peptide	N	MS	Ala	Leu	Ala	Ala	Ser	Ala	Leu	Pro	Becker-Pauly et al., 2011
60S ribosomal protein L4	P36578	125-140	Cys-Ser-Ala-Leu128+Ala-Peptide	N	MS	Cys	Ser	Ala	Leu	Ala	Ala	Ser	Ala	Becker-Pauly et al., 2011
60S ribosomal protein L6	Q02878	231-246	Glu-IIe-Phe-Asp234+Thr-Peptide	N	MS	Glu	Ile	Phe	Asp	Thr	Glu	Lys	Glu	Becker-Pauly et al., 2011
60S ribosomal protein L7	P18124	226-242	His-Phe-Val-Glu229+Gly-Peptide	N	MS	His	Phe	Val	Glu	Gly	Gly	Asp	Ala	Becker-Pauly et al., 2011
60S ribosomal protein L7	P18124	228-242	Val-Glu-Gly-Gly231+Asp-Peptide	N	MS	Val	Glu	Gly	Gly	Asp	Ala	Gly	Asn	Becker-Pauly et al., 2011
Acetyl-CoA acetyltransferase, cytosolic	Q9BWD1	145-169	Ser-Ile-Leu-Cys148+Asp-Peptide	N	MS	Ser	Ile	Leu	Cys	Asp	Gly	Leu	Thr	Becker-Pauly et al., 2011
Acetyl-CoA acetyltransferase, cytosolic	Q9BWD1	23-39	Gly-Ala-Leu-Ala26+Ala-Peptide	N	MS	Gly	Ala	Leu	Ala	Ala	Val	Pro	Val	Becker-Pauly et al., 2011
Acetyl-CoA acetyltransferase, cytosolic	Q9BWD1	47-71	Val-Ala-Pro-Glu50+Asp-Peptide	N	MS	Val	Ala	Pro	Glu	Asp	Val	Ser	Glu	Becker-Pauly et al., 2011
Acidic leucine-rich nuclear phosphoprotein 32 family member E	Q9BTT0	69-83	Leu-Glu-Leu-Ser72+Asp-Peptide	N	MS	Leu	Glu	Leu	Ser	Asp	Asn	Ile	Ile	Becker-Pauly et al., 2011
Acyl-CoA-binding protein	P07108	35-53	Ala-Thr-Val-Gly38+Asp-Peptide	N	MS	Ala	Thr	Val	Gly	Asp	Ile	Asn	Thr	Becker-Pauly et al., 2011
Adenosylhomocysteinase	P23526	151-165	Arg-Gly-Ile-Ser154+Glu-Peptide	N	MS	Arg	Gly	Ile	Ser	Glu	Glu	Thr	Thr	Becker-Pauly et al., 2011
Adenosylhomocysteinase	P23526	419-432	Met-Ser-Cys-Asp422+Gly-Peptide	N	MS	Met	Ser	Cys	Asp	Gly	Pro	Phe	Lys	Becker-Pauly et al., 2011
Adenylosuccinate lyase	P30566	211-224	Leu-Phe-Glu-Gly214+Asp-Peptide	N	MS	Leu	Phe	Glu	Gly	Asp	Asp	His	Lys	Becker-Pauly et al., 2011
ADP-ribosylation factor 3	P61204	130-146	Leu-Pro-Asn-Ala133+Met-Peptide	N	MS	Leu	Pro	Asn	Ala	Met	Asn	Ala	Ala	Becker-Pauly et al., 2011
Alpha-actinin-1	P12814	658-672	Ile-Glu-Met-His661+Gly-Peptide	N	MS	Ile	Glu	Met	His	Gly	Thr	Leu	Glu	Becker-Pauly et al., 2011
Alpha-enolase	P06733	205-221	Thr-Asn-Val-Gly208+Asp-Peptide	N	MS	Thr	Asn	Val	Gly	Asp	Glu	Gly	Gly	Becker-Pauly et al., 2011
Alpha-enolase	P06733	165-179	Met-Gln-Glu-Phe168+Met-Peptide	N	MS	Met	Gln	Glu	Phe	Met	Ile	Leu	Pro	Becker-Pauly et al., 2011
Alpha-enolase	P06733	163-179	Leu-Ala-Met-Gln166+Glu-Peptide	N	MS	Leu	Ala	Met	Gln	Glu	Phe	Met	Ile	Becker-Pauly et al., 2011
Angiomotin	Q4VCS5	1025-1039	Ala-Glu-Val-Pro1028+Ala-Peptide	N	MS	Ala	Glu	Val	Pro	Ala	Ser	Pro	Ala	Becker-Pauly et al., 2011
Annexin A1	P04083	58-72	Lys-Gly-Val-Asp61+Glu-Peptide	N	MS	Lys	Gly	Val	Asp	Glu	Ala	Thr	Ile	Becker-Pauly et al., 2011
Annexin A6	P08133	141-156	Asp-Leu-Glu-Ala144+Asp-Peptide	N	MS	Asp	Leu	Glu	Ala	Asp	Ile	Ile	Gly	Becker-Pauly et al., 2011
Annexin A6	P08133	379-393	Leu-Gly-Thr-Asp382+Glu-Peptide	N	MS	Leu	Gly	Thr	Asp	Glu	Asp	Thr	Ile	Becker-Pauly et al., 2011
Annexin A6	P08133	380-393	Gly-Thr-Asp-Glu383+Asp-Peptide	N	MS	Gly	Thr	Asp	Glu	Asp	Thr	Ile	Ile	Becker-Pauly et al., 2011
Annexin A7	P20073	201-215	Phe-Glu-Thr-Asp204+Glu-Peptide	N	MS	Phe	Glu	Thr	Asp	Glu	Gln	Ala	Ile	Becker-Pauly et al., 2011
AP-3 complex subunit delta-1	O14617	803-820	Asp-Ile-Asp-Leu806+Asp-Peptide	N	MS	Asp	Ile	Asp	Leu	Asp	Lys	Pro	Leu	Becker-Pauly et al., 2011
AP-3 complex subunit delta-1	O14617	198-212	Gly-Val-Gln-Ser201+Ala-Peptide	N	MS	Gly	Val	Gln	Ser	Ala	Ala	Val	Asn	Becker-Pauly et al., 2011
Apoptosis inhibitor 5	Q9BZZ5-4	12-25	Gly-Ile-Leu-Ala15+Asp-Peptide	N	MS	Gly	Ile	Leu	Ala	Asp	Ala	Thr	Glu	Becker-Pauly et al., 2011
Aspartate aminotransferase, mitochondrial	P00505	35-53	His-Val-Glu-Met38+Gly-Peptide	N	MS	His	Val	Glu	Met	Gly	Pro	Pro	Asp	Becker-Pauly et al., 2011
Ataxin-10	Q9UBB4	14-27	Val-Met-Val-Pro17+Ala-Peptide	N	MS	Val	Met	Val	Pro	Ala	Pro	Ile	Gln	Becker-Pauly et al., 2011
Ataxin-2-like protein	Q8WWM7	56-70	Ser-Pro-Cys-Leu59+Gly-Peptide	N	MS	Ser	Pro	Cys	Leu	Gly	Pro	Val	Ala	Becker-Pauly et al., 2011
ATP synthase subunit alpha, mitochondrial	P25705	136-149	Ala-Ile-Val-Asp139+Val-Peptide	N	MS	Ala	Ile	Val	Asp	Val	Pro	Val	Gly	Becker-Pauly et al., 2011
ATP synthase subunit beta, mitochondrial	P06576	126-143	Leu-Asp-Ser-Gly129+Ala-Peptide	N	MS	Leu	Asp	Ser	Gly	Ala	Pro	Ile	Lys	Becker-Pauly et al., 2011
ATP synthase subunit beta, mitochondrial	P06576	245-259	Asp-Leu-Tyr-His148+Glu-Peptide	N	MS	Asp	Leu	Tyr	His	Glu	Met	Ile	Glu	Becker-Pauly et al., 2011
ATP-citrate synthase	P53396	246-259	Ala-Tyr-Pro-Glu249+Glu-Peptide	N	MS	Ala	Tyr	Pro	Glu	Glu	Ala	Tyr	Ile	Becker-Pauly et al., 2011
ATP-dependent RNA helicase A	Q08211	824-837	Pro-Pro-Leu-Asp827+Ala-Peptide	N	MS	Pro	Pro	Leu	Asp	Ala	Val	Ile	Glu	Becker-Pauly et al., 2011
ATP-dependent RNA helicase A	Q08211	107-120	Thr-Thr-Met-Gly110+Gly-Peptide	N	MS	Thr	Thr	Met	Gly	Gly	Pro	Leu	Pro	Becker-Pauly et al., 2011
ATP-dependent RNA helicase A	Q08211	823-837	Pro-Pro-Pro-Leu826+Asp-Peptide	N	MS	Pro	Pro	Pro	Leu	Asp	Ala	Val	Ile	Becker-Pauly et al., 2011
Barrier-to-autointegration factor	O75531	11-33	Val-Ala-Glu-Pro14+Met-Peptide	N	MS	Val	Ala	Glu	Pro	Met	Gly	Glu	Lys	Becker-Pauly et al., 2011
Barrier-to-autointegration factor	O75531	9-32	Asp-Phe-Val-Ala12+Glu-Peptide	N	MS	Asp	Phe	Val	Ala	Glu	Pro	Met	Gly	Becker-Pauly et al., 2011
Bifunctional aminoacyl-tRNA synthetase	P07814	1094-1106	Val-Ala-Asp-Phe1097+Ala-Peptide	N	MS	Val	Ala	Asp	Phe	Ala	Pro	Glu	Val	Becker-Pauly et al., 2011
Bifunctional purine biosynthesis protein PURH	P31939	510-525	Ala-Leu-Phe-Glu513+Glu-Peptide	N	MS	Ala	Leu	Phe	Glu	Glu	Val	Pro	Glu	Becker-Pauly et al., 2011
BolA-like protein 2	Q9H3K6	58-73	Ala-Cys-Leu-Ala61+Glu-Peptide	N	MS	Ala	Cys	Leu	Ala	Glu	Glu	Leu	Pro	Becker-Pauly et al., 2011
Brain acid soluble protein 1	P80723	210-227	Lys-Pro-Val-Glu213+Ala-Peptide	N	MS	Lys	Pro	Val	Glu	Ala	Pro	Ala	Ala	Becker-Pauly et al., 2011
BRISC and BRCA1-A complex member 1	Q9NWV8	13-26	Glu-Glu-Glu-Glu16+Glu-Peptide	N	MS	Glu	Glu	Glu	Glu	Glu	Glu	His	Ser	Becker-Pauly et al., 2011
Bystin	Q13895	68-83	Glu-Leu-Glu-Ala71+Glu-Peptide	N	MS	Glu	Leu	Glu	Ala	Glu	His	Gly	Thr	Becker-Pauly et al., 2011
Calnexin	P27824	555-573	Asp-Ala-Glu-Glu558+Asp-Peptide	N	MS	Asp	Ala	Glu	Glu	Asp	Gly	Gly	Thr	Becker-Pauly et al., 2011
Calnexin	P27824	445-459	Arg-Ile-Val-Asp448+Asp-Peptide	N	MS	Arg	Ile	Val	Asp	Asp	Trp	Ala	Asn	Becker-Pauly et al., 2011
Calpastatin	P20810	428-444	Thr-Val-Pro-Asp431+Asp-Peptide	N	MS	Thr	Val	Pro	Asp	Asp	Ala	Val	Glu	Becker-Pauly et al., 2011
Calreticulin	P27797	129-142	Asn-Ile-Met-Phe132+Gly-Peptide	N	MS	Asn	Ile	Met	Phe	Gly	Pro	Asp	Ile	Becker-Pauly et al., 2011
Calreticulin	P27797	258-272	Asp-Gly-Glu-Trp261+Glu-Peptide	N	MS	Asp	Gly	Glu	Trp	Glu	Pro	Pro	Val	Becker-Pauly et al., 2011
Calreticulin	P27797	195-207	Ser-Leu-Glu-Asp198+Asp-Peptide	N	MS	Ser	Leu	Glu	Asp	Asp	Trp	Asp	Phe	Becker-Pauly et al., 2011
Caprin-1	Q14444	448-461	Leu-Tyr-Gln-Pro451+Ser-Peptide	N	MS	Leu	Tyr	Gln	Pro	Ser	His	Ala	Thr	Becker-Pauly et al., 2011
Cellular nucleic acid-binding protein	P62633-2	89-102	Gln-Cys-Cys-Tyr92+Asn-Peptide	N	MS	Gln	Cys	Cys	Tyr	Asn	Cys	Gly	Lys	Becker-Pauly et al., 2011
Chloride intracellular channel protein 4	Q9Y696	10-24	Leu-Lys-Glu-Glu13+Asp-Peptide	N	MS	Leu	Lys	Glu	Glu	Asp	Lys	Glu	Pro	Becker-Pauly et al., 2011
Choriogonadotropin subunit beta variant 2	Q6NT52-2	16-32	Arg-His-Val-Lys19+Gly-Peptide	N	MS	Arg	His	Val	Lys	Gly	Ala	Ala	Ala	Becker-Pauly et al., 2011
Citrate synthase, mitochondrial	O75390	165-183	Met-Ser-Gln-Leu168+Ser-Peptide	N	MS	Met	Ser	Gln	Leu	Ser	Ala	Ala	Val	Becker-Pauly et al., 2011
Clathrin heavy chain 2	P53675	867-881	Gln-Glu-Gly-Cys870+Glu-Peptide	N	MS	Gln	Glu	Gly	Cys	Glu	Glu	Pro	Ala	Becker-Pauly et al., 2011
Clathrin heavy chain 2	P53675	868-881	Glu-Gly-Cys-Glu871+Glu-Peptide	N	MS	Glu	Gly	Cys	Glu	Glu	Pro	Ala	Thr	Becker-Pauly et al., 2011
Clathrin interactor 1	Q14677	114-129	Tyr-His-Phe-Val117+Asp-Peptide	N	MS	Tyr	His	Phe	Val	Asp	Glu	His	Gly	Becker-Pauly et al., 2011
Coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial	Q9Y6H1	34-51	Pro-Pro-Ala-Ala37+Ala-Peptide	N	MS	Pro	Pro	Ala	Ala	Ala	Pro	Pro	Ser	Becker-Pauly et al., 2011
Collagen alpha-1(III) chain	P02461	614-629	Thr-Gly-Pro-Gln617+Gly-Peptide	N	MS	Thr	Gly	Pro	Gln	Gly	Pro	Pro	Gly	Becker-Pauly et al., 2011
Collagen alpha-1(X) chain	Q03692	334-349	Pro-Gly-Leu-Thr337+Gly-Peptide	N	MS	Pro	Gly	Leu	Thr	Gly	Pro	Pro	Gly	Becker-Pauly et al., 2011
Complement component 1 Q subcomponent-binding protein, mitochondrial	Q07021	159-180	Glu-Pro-Glu-Leu162+Thr-Peptide	N	MS	Glu	Pro	Glu	Leu	Thr	Ser	Thr	Pro	Becker-Pauly et al., 2011
Complement component 1 Q subcomponent-binding protein, mitochondrial	Q07021	155-180	Val-Glu-Glu-Gln158+Glu-Peptide	N	MS	Val	Glu	Glu	Gln	Glu	Pro	Glu	Leu	Becker-Pauly et al., 2011
Copper transport protein ATOX1	O00244	41-56	Cys-Ile-Glu-Ser44+Glu-Peptide	N	MS	Cys	Ile	Glu	Ser	Glu	His	Ser	Met	Becker-Pauly et al., 2011
Costars family protein C6orf115	Q9P1F3	1-16	Met-Asn-Val-Asp4+His-Peptide	N	MS	Met	Asn	Val	Asp	His	Glu	Val	Asn	Becker-Pauly et al., 2011
Costars family protein C6orf115	Q9P1F3	2-16	Asn-Val-Asp-His5+Glu-Peptide	N	MS	Asn	Val	Asp	His	Glu	Val	Asn	Leu	Becker-Pauly et al., 2011
Creatine kinase B-type	P12277	15-32	Pro-Ala-Glu-Asp18+Glu-Peptide	N	MS	Pro	Ala	Glu	Asp	Glu	Phe	Pro	Asp	Becker-Pauly et al., 2011
Creatine kinase B-type	P12277	14-32	Phe-Pro-Ala-Glu17+Asp-Peptide	N	MS	Phe	Pro	Ala	Glu	Asp	Glu	Phe	Pro	Becker-Pauly et al., 2011
Creatine kinase M-type	P06732	186-209	Gln-Leu-Ile-Asp189+Asp-Peptide	N	MS	Gln	Leu	Ile	Asp	Asp	His	Phe	Leu	Becker-Pauly et al., 2011
Cystatin-B	P04080	11-24	Pro-Ala-Thr-Ala14+Glu-Peptide	N	MS	Pro	Ala	Thr	Ala	Glu	Thr	Gln	His	Becker-Pauly et al., 2011
Cystatin-B	P04080	1-24	Met-Met-Cys-Gly4+Ala-Peptide	N	MS	Met	Met	Cys	Gly	Ala	Pro	Ser	Ala	Becker-Pauly et al., 2011
Cysteine and histidine-rich domain-containing protein 1	Q9UHD1	25-38	Thr-Tyr-His-Pro28+Gly-Peptide	N	MS	Thr	Tyr	His	Pro	Gly	Val	Pro	Val	Becker-Pauly et al., 2011
Cytochrome c oxidase subunit 2	P00403	158-171	Asp-Val-Leu-His161+Ser-Peptide	N	MS	Asp	Val	Leu	His	Ser	Trp	Ala	Val	Becker-Pauly et al., 2011
D-3-phosphoglycerate dehydrogenase	O43175	476-491	Ala-Met-Leu-Pro479+Thr-Peptide	N	MS	Ala	Met	Leu	Pro	Thr	Met	Ile	Gly	Becker-Pauly et al., 2011
DJ-1 putative peptidase	Q99497	104-122	Ala-Ile-Cys-Ala107+Gly-Peptide	N	MS	Ala	Ile	Cys	Ala	Gly	Pro	Thr	Ala	Becker-Pauly et al., 2011
DNA fragmentation factor subunit alpha	O00273	230-256	Glu-Thr-Ser-Ser233+Asp-Peptide	N	MS	Glu	Thr	Ser	Ser	Asp	Val	Ala	Leu	Becker-Pauly et al., 2011
DNA replication licensing factor MCM4	P33991	463-478	Ala-Ser-Ala-Leu466+Ala-Peptide	N	MS	Ala	Ser	Ala	Leu	Ala	Pro	Ser	Ile	Becker-Pauly et al., 2011
Dynamin-2	P50570	823-837	Asp-Leu-Phe-Pro826+Ala-Peptide	N	MS	Asp	Leu	Phe	Pro	Ala	Pro	Pro	Gln	Becker-Pauly et al., 2011
Elongation factor 1-alpha 1	P68104	277-290	Val-Val-Thr-Phe280+Ala-Peptide	N	MS	Val	Val	Thr	Phe	Ala	Pro	Val	Asn	Becker-Pauly et al., 2011
Elongation factor 1-alpha 1	P68104	226-247	Thr-Thr-Leu-Leu229+Glu-Peptide	N	MS	Thr	Thr	Leu	Leu	Glu	Ala	Leu	Asp	Becker-Pauly et al., 2011
Elongation factor 1-alpha 2	Q05639	277-290	Val-Val-Thr-Phe280+Ala-Peptide	N	MS	Val	Val	Thr	Phe	Ala	Pro	Val	Asn	Becker-Pauly et al., 2011
Elongation factor 1-alpha 2	Q05639	298-313	Ala-Leu-Ser-Glu301+Ala-Peptide	N	MS	Ala	Leu	Ser	Glu	Ala	Leu	Pro	Gly	Becker-Pauly et al., 2011
Elongation factor 1-beta	P24534	39-54	Glu-Ala-Val-Ser42+Ser-Peptide	N	MS	Glu	Ala	Val	Ser	Ser	Pro	Pro	Pro	Becker-Pauly et al., 2011
Elongation factor 1-gamma	P26641	30-45	Arg-Val-Leu-Ser33+Ala-Peptide	N	MS	Arg	Val	Leu	Ser	Ala	Pro	Pro	His	Becker-Pauly et al., 2011
Elongation factor 2	P13639	824-839	Pro-Phe-Asp-Asn827+Ser-Peptide	N	MS	Pro	Phe	Asp	Asn	Ser	Ser	Arg	Pro	Becker-Pauly et al., 2011
Elongation factor 2	P13639	612-625	Gly-Leu-Ala-Glu615+Asp-Peptide	N	MS	Gly	Leu	Ala	Glu	Asp	Ile	Asp	Lys	Becker-Pauly et al., 2011
Elongation factor 2	P13639	768-785	Gly-His-Val-Phe771+Glu-Peptide	N	MS	Gly	His	Val	Phe	Glu	Glu	Ser	Gln	Becker-Pauly et al., 2011
Elongation factor 2	P13639	769-785	His-Val-Phe-Glu772+Glu-Peptide	N	MS	His	Val	Phe	Glu	Glu	Ser	Gln	Val	Becker-Pauly et al., 2011
Endoplasmin	P14625	417-728	Phe-Ile-Thr-Asp420+Asp-Peptide	N	MS	Phe	Ile	Thr	Asp	Asp	Phe	His	Asp	Becker-Pauly et al., 2011
Endoplasmin	Q4R520	50-67	Gln-Arg-Glu-Glu53+Glu-Peptide	N	MS	Gln	Arg	Glu	Glu	Glu	Ala	Ile	Gln	Becker-Pauly et al., 2011
Endoplasmin	P14625	328-348	Lys-Thr-Val-Trp331+Asp-Peptide	N	MS	Lys	Thr	Val	Trp	Asp	Trp	Glu	Leu	Becker-Pauly et al., 2011
Epiplakin	P58107	2400-2414	Leu-Leu-Arg-Arg2403+Cys-Peptide	N	MS	Leu	Leu	Arg	Arg	Cys	Val	Pro	Asp	Becker-Pauly et al., 2011
Eukaryotic initiation factor 4A-I	P60842	147-161	Leu-Gln-Met-Glu150+Ala-Peptide	N	MS	Leu	Gln	Met	Glu	Ala	Pro	His	Ile	Becker-Pauly et al., 2011
Eukaryotic initiation factor 4A-III	P38919	53-67	Ile-Tyr-Ala-Tyr56+Gly-Peptide	N	MS	Ile	Tyr	Ala	Tyr	Gly	Phe	Glu	Lys	Becker-Pauly et al., 2011
Eukaryotic translation initiation factor 2 subunit 3	P41091	328-342	Leu-Gln-Tyr-Ala331+Ala-Peptide	N	MS	Leu	Gln	Tyr	Ala	Ala	Pro	Gly	Gly	Becker-Pauly et al., 2011
Eukaryotic translation initiation factor 5A-1	P63241	93-109	Gly-Ile-Gln-Asp96+Gly-Peptide	N	MS	Gly	Ile	Gln	Asp	Gly	Tyr	Leu	Ser	Becker-Pauly et al., 2011
Eukaryotic translation initiation factor 5A-1-like	Q6IS14	71-85	Asp-Ile-Cys-Pro74+Ser-Peptide	N	MS	Asp	Ile	Cys	Pro	Ser	Thr	His	Asn	Becker-Pauly et al., 2011
Exportin-2	P55060	1-17	Met-Glu-Leu-Ser4+Asp-Peptide	N	MS	Met	Glu	Leu	Ser	Asp	Ala	Asn	Leu	Becker-Pauly et al., 2011
Extended synaptotagmin-2	A0FGR8	722-735	Pro-Pro-Glu-Ala725+Gly-Peptide	N	MS	Pro	Pro	Glu	Ala	Gly	Pro	Gln	Gly	Becker-Pauly et al., 2011
F-actin-capping protein subunit alpha-2	P47755	20-37	Phe-Ile-Ile-His23+Ala-Peptide	N	MS	Phe	Ile	Ile	His	Ala	Pro	Pro	Gly	Becker-Pauly et al., 2011
Far upstream element-binding protein 1	Q96AE4	221-236	Met-Ile-Gln-Asp224+Gly-Peptide	N	MS	Met	Ile	Gln	Asp	Gly	Pro	Gln	Asn	Becker-Pauly et al., 2011
Far upstream element-binding protein 1	Q96AE4	571-584	Gln-Gln-Asn-Pro574+Ala-Peptide	N	MS	Gln	Gln	Asn	Pro	Ala	Pro	Ala	Gly	Becker-Pauly et al., 2011
Far upstream element-binding protein 2	Q92945	551-564	Tyr-Pro-Gln-Trp554+Gln-Peptide	N	MS	Tyr	Pro	Gln	Trp	Gln	Pro	Pro	Ala	Becker-Pauly et al., 2011
Fatty acid synthase	P49327	284-298	Pro-Glu-Ser-Phe287+Glu-Peptide	N	MS	Pro	Glu	Ser	Phe	Glu	Tyr	Ile	Glu	Becker-Pauly et al., 2011
Fatty acid synthase	P49327	865-883	Asp-Thr-Ser-Ser868+Glu-Peptide	N	MS	Asp	Thr	Ser	Ser	Glu	Ser	Pro	Asp	Becker-Pauly et al., 2011
Fatty acid synthase	P49327	649-667	Val-Thr-Ile-Ser652+Gly-Peptide	N	MS	Val	Thr	Ile	Ser	Gly	Pro	Gln	Ala	Becker-Pauly et al., 2011
Fatty acid synthase	P49327	1407-1423	Thr-Pro-Gln-Asp1410+Ser-Peptide	N	MS	Thr	Pro	Gln	Asp	Ser	Pro	Ile	Phe	Becker-Pauly et al., 2011
Fatty acid synthase	P49327	652-667	Ser-Gly-Pro-Gln655+Ala-Peptide	N	MS	Ser	Gly	Pro	Gln	Ala	Pro	Val	Phe	Becker-Pauly et al., 2011
Filamin-A	P21333	2273-2289	Ile-Ala-Val-Glu2276+Gly-Peptide	N	MS	Ile	Ala	Val	Glu	Gly	Pro	Ser	Lys	Becker-Pauly et al., 2011
Filamin-A	P21333	1136-1151	Asn-Ile-Leu-Phe1140+Ala-Peptide	N	MS	Asn	Ile	Leu	Phe	Ala	Asp	Thr	His	Becker-Pauly et al., 2011
Fructose-bisphosphate aldolase A	P04075	30-43	Ile-Leu-Leu-Ala33+Asp-Peptide	N	MS	Ile	Leu	Leu	Ala	Asp	Glu	Ser	Thr	Becker-Pauly et al., 2011
Fructose-bisphosphate aldolase A	P04075	274-289	Gly-Gln-Ser-Glu277+Glu-Peptide	N	MS	Gly	Gln	Ser	Glu	Glu	Glu	Ala	Ser	Becker-Pauly et al., 2011
Fructose-bisphosphate aldolase A	P04075	275-289	Gln-Ser-Glu-Glu278+Glu-Peptide	N	MS	Gln	Ser	Glu	Glu	Glu	Ala	Ser	Ile	Becker-Pauly et al., 2011
Fructose-bisphosphate aldolase C	P09972	178-201	Cys-Gln-Gln-Asn181+Gly-Peptide	N	MS	Cys	Gln	Gln	Asn	Gly	Ile	Val	Pro	Becker-Pauly et al., 2011
G-protein coupled receptor 3	P46089	69-86	Pro-Ala-Phe-Arg72+Ala-Peptide	N	MS	Pro	Ala	Phe	Arg	Ala	Pro	Met	Phe	Becker-Pauly et al., 2011
Gamma-enolase	P09104	145-162	Leu-Pro-Val-Pro148+Ala-Peptide	N	MS	Leu	Pro	Val	Pro	Ala	Phe	Asn	Val	Becker-Pauly et al., 2011
Gamma-enolase	P09104	143-162	Leu-Ile-Leu-Pro146+Val-Peptide	N	MS	Leu	Ile	Leu	Pro	Val	Pro	Ala	Phe	Becker-Pauly et al., 2011
Gamma-enolase	P09104	37-50	Ser-Gly-Ala-Ser40+Thr-Peptide	N	MS	Ser	Gly	Ala	Ser	Thr	Gly	Ile	Tyr	Becker-Pauly et al., 2011
Gelsolin	P06396	282-296	Ala-Gly-Thr-Glu285+Asp-Peptide	N	MS	Ala	Gly	Thr	Glu	Asp	Thr	Ala	Lys	Becker-Pauly et al., 2011
General vesicular transport factor p115	O60763	10-25	Gly-Gln-Ser-Ala13+Gly-Peptide	N	MS	Gly	Gln	Ser	Ala	Gly	Pro	Gln	His	Becker-Pauly et al., 2011
Glucose-6-phosphate isomerase	P06744	535-550	Val-Thr-Ser-His538+Asp-Peptide	N	MS	Val	Thr	Ser	His	Asp	Ala	Ser	Thr	Becker-Pauly et al., 2011
Glutamate dehydrogenase 2, mitochondrial	P49448	403-420	Glu-Gly-Ala-Asn406+Gly-Peptide	N	MS	Glu	Gly	Ala	Asn	Gly	Pro	Thr	Thr	Becker-Pauly et al., 2011
Glutamine synthetase	P15104	343-357	Ser-Ala-Asn-Cys346+Asp-Peptide	N	MS	Ser	Ala	Asn	Cys	Asp	Pro	Phe	Ser	Becker-Pauly et al., 2011
Glutathione S-transferase omega-1	P78417	134-148	Gln-Asn-Lys-Glu137+Asp-Peptide	N	MS	Gln	Asn	Lys	Glu	Asp	Tyr	Ala	Gly	Becker-Pauly et al., 2011
Glutathione S-transferase P	P09211	192-210	Ala-Phe-Leu-Ala195+Ser-Peptide	N	MS	Ala	Phe	Leu	Ala	Ser	Pro	Glu	Tyr	Becker-Pauly et al., 2011
Glyceraldehyde-3-phosphate dehydrogenase	P04406	130-145	Met-Phe-Val-Met133+Gly-Peptide	N	MS	Met	Phe	Val	Met	Gly	Val	Asn	His	Becker-Pauly et al., 2011
Glyceraldehyde-3-phosphate dehydrogenase	P04406	172-186	Glu-Gly-Leu-Met175+Thr-Peptide	N	MS	Glu	Gly	Leu	Met	Thr	Thr	Val	His	Becker-Pauly et al., 2011
Glyceraldehyde-3-phosphate dehydrogenase	P04406	201-215	Gly-Ala-Leu-Gln204+Asn-Peptide	N	MS	Gly	Ala	Leu	Gln	Asn	Ile	Ile	Pro	Becker-Pauly et al., 2011
Glyceraldehyde-3-phosphate dehydrogenase	P04406	292-309	Ser-Ser-Thr-Phe295+Asp-Peptide	N	MS	Ser	Ser	Thr	Phe	Asp	Ala	Gly	Ala	Becker-Pauly et al., 2011
Glyceraldehyde-3-phosphate dehydrogenase	P04406	293-309	Ser-Thr-Phe-Asp296+Ala-Peptide	N	MS	Ser	Thr	Phe	Asp	Ala	Gly	Ala	Gly	Becker-Pauly et al., 2011
Glyceraldehyde-3-phosphate dehydrogenase	P04406	121-145	Ile-Ser-Ala-Pro124+Ser-Peptide	N	MS	Ile	Ser	Ala	Pro	Ser	Ala	Asp	Ala	Becker-Pauly et al., 2011
Glyceraldehyde-3-phosphate dehydrogenase	P04406	123-145	Ala-Pro-Ser-Ala126+Asp-Peptide	N	MS	Ala	Pro	Ser	Ala	Asp	Ala	Pro	Met	Becker-Pauly et al., 2011
Glyceraldehyde-3-phosphate dehydrogenase	P04406	126-145	Ala-Asp-Ala-Pro129+Met-Peptide	N	MS	Ala	Asp	Ala	Pro	Met	Phe	Val	Met	Becker-Pauly et al., 2011
Glyceraldehyde-3-phosphate dehydrogenase	P04406	124-145	Pro-Ser-Ala-Asp127+Ala-Peptide	N	MS	Pro	Ser	Ala	Asp	Ala	Pro	Met	Phe	Becker-Pauly et al., 2011
Glyceraldehyde-3-phosphate dehydrogenase	P04406	162-186	Lys-Val-Ile-His165+Asp-Peptide	N	MS	Lys	Val	Ile	His	Asp	Asn	Phe	Gly	Becker-Pauly et al., 2011
Glyoxylate reductase/hydroxypyruvate reductase	Q9UBQ7	272-286	Ser-Pro-Glu-Pro275+Leu-Peptide	N	MS	Ser	Pro	Glu	Pro	Leu	Pro	Thr	Asn	Becker-Pauly et al., 2011
GRIP and coiled-coil domain-containing protein 1	Q96CN9	258-274	Arg-Thr-Gln-Arg261+Gln-Peptide	N	MS	Arg	Thr	Gln	Arg	Gln	Asp	Leu	Glu	Becker-Pauly et al., 2011
GTPase-activating protein and VPS9 domain-containing protein 1	Q14C86	462-475	Thr-Pro-Gln-Leu465+Ser-Peptide	N	MS	Thr	Pro	Gln	Leu	Ser	Pro	Ala	Thr	Becker-Pauly et al., 2011
Heat shock 70 kDa protein 1A/1B	P08107	518-533	Met-Val-Gln-Glu521+Ala-Peptide	N	MS	Met	Val	Gln	Glu	Ala	Glu	Lys	Tyr	Becker-Pauly et al., 2011
Heat shock 70 kDa protein 1A/1B	P08107	89-102	His-Trp-Pro-Phe92+Gln-Peptide	N	MS	His	Trp	Pro	Phe	Gln	Val	Ile	Asn	Becker-Pauly et al., 2011
Heat shock 70 kDa protein 1A/1B	P08107	578-595	Ile-Ser-Trp-Leu581+Asp-Peptide	N	MS	Ile	Ser	Trp	Leu	Asp	Ala	Asn	Thr	Becker-Pauly et al., 2011
Heat shock 70 kDa protein 1A/1B	P08107	608-628	Ser-Gly-Leu-Tyr611+Gln-Peptide	N	MS	Ser	Gly	Leu	Tyr	Gln	Gly	Ala	Gly	Becker-Pauly et al., 2011
Heat shock 70 kDa protein 1A/1B	P08107	579-595	Ser-Trp-Leu-Asp582+Ala-Peptide	N	MS	Ser	Trp	Leu	Asp	Ala	Asn	Thr	Leu	Becker-Pauly et al., 2011
Heat shock 70 kDa protein 1A/1B	P08107	614-628	Ala-Gly-Gly-Pro617+Gly-Peptide	N	MS	Ala	Gly	Gly	Pro	Gly	Pro	Gly	Gly	Becker-Pauly et al., 2011
Heat shock 70 kDa protein 1A/1B	P08107	612-628	Gln-Gly-Ala-Gly615+Gly-Peptide	N	MS	Gln	Gly	Ala	Gly	Gly	Pro	Gly	Pro	Becker-Pauly et al., 2011
Heat shock 70 kDa protein 1A/1B	P08107	76-88	Arg-Lys-Phe-Gly79+Asp-Peptide	N	MS	Arg	Lys	Phe	Gly	Asp	Pro	Val	Val	Becker-Pauly et al., 2011
Heat shock 70 kDa protein 1A/1B	P08107	58-71	Gln-Val-Ala-Leu61+Asn-Peptide	N	MS	Gln	Val	Ala	Leu	Asn	Pro	Gln	Asn	Becker-Pauly et al., 2011
Heat shock 70 kDa protein 1A/1B	P08107	577-595	Val-Ile-Ser-Trp580+Leu-Peptide	N	MS	Val	Ile	Ser	Trp	Leu	Asp	Ala	Asn	Becker-Pauly et al., 2011
Heat shock 70 kDa protein 1A/1B	P08107	88-102	Lys-His-Trp-Pro91+Phe-Peptide	N	MS	Lys	His	Trp	Pro	Phe	Gln	Val	Ile	Becker-Pauly et al., 2011
Heat shock 70 kDa protein 1A/1B	P08107	85-102	Ser-Asp-Met-Lys88+His-Peptide	N	MS	Ser	Asp	Met	Lys	His	Trp	Pro	Phe	Becker-Pauly et al., 2011
Heat shock 70 kDa protein 1A/1B	P08107	325-342	Lys-Leu-Asp-Lys328+Ala-Peptide	N	MS	Lys	Leu	Asp	Lys	Ala	Gln	Ile	His	Becker-Pauly et al., 2011
Heat shock 70 kDa protein 1A/1B	P08107	233-247	Phe-Asp-Asn-Arg236+Leu-Peptide	N	MS	Phe	Asp	Asn	Arg	Leu	Val	Asn	His	Becker-Pauly et al., 2011
Heat shock 70 kDa protein 1A/1B	P08107	536-550	Val-Ser-Ala-Lys539+Asn-Peptide	N	MS	Val	Ser	Ala	Lys	Asn	Ala	Leu	Glu	Becker-Pauly et al., 2011
Heat shock 70 kDa protein 1A/1B	P08107	368-384	Ala-Val-Ala-Tyr371+Gly-Peptide	N	MS	Ala	Val	Ala	Tyr	Gly	Ala	Ala	Val	Becker-Pauly et al., 2011
Heat shock 70 kDa protein 1A/1B	P08107	157-171	Ala-Thr-Lys-Asp160+Ala-Peptide	N	MS	Ala	Thr	Lys	Asp	Ala	Gly	Val	Ile	Becker-Pauly et al., 2011
Heat shock 70 kDa protein 1A/1B	P08107	572-589	Asp-Lys-Cys-Gln575+Glu-Peptide	N	MS	Asp	Lys	Cys	Gln	Glu	Val	Ile	Ser	Becker-Pauly et al., 2011
Heat shock 70 kDa protein 4	P34932	720-733	Glu-Asp-Gln-Tyr723+Asp-Peptide	N	MS	Glu	Asp	Gln	Tyr	Asp	His	Leu	Asp	Becker-Pauly et al., 2011
Heat shock cognate 71 kDa protein	P11142	221-236	Ser-Thr-Ala-Gly224+Asp-Peptide	N	MS	Ser	Thr	Ala	Gly	Asp	Thr	His	Leu	Becker-Pauly et al., 2011
Heat shock cognate 71 kDa protein	P11142	12-25	Gly-Thr-Thr-Tyr15+Ser-Peptide	N	MS	Gly	Thr	Thr	Tyr	Ser	Cys	Val	Gly	Becker-Pauly et al., 2011
Heat shock cognate 71 kDa protein	P11142	433-447	Asp-Asn-Gln-Pro436+Gly-Peptide	N	MS	Asp	Asn	Gln	Pro	Gly	Val	Leu	Ile	Becker-Pauly et al., 2011
Heat shock protein HSP 90-alpha	P07900	632-647	Lys-His-Leu-Glu635+IIe-Peptide	N	MS	Lys	His	Leu	Glu	Ile	Asn	Pro	Asp	Becker-Pauly et al., 2011
Heat shock protein HSP 90-beta	P08238	307-319	Ser-Leu-Thr-Asn310+Asp-Peptide	N	MS	Ser	Leu	Thr	Asn	Asp	Trp	Glu	Asp	Becker-Pauly et al., 2011
Heat shock protein HSP 90-beta	P08238	624-639	Lys-His-Leu-Glu627+IIe-Peptide	N	MS	Lys	His	Leu	Glu	Ile	Asn	Pro	Asp	Becker-Pauly et al., 2011
Heat shock protein HSP 90-beta	P08238	79-95	Pro-Gln-Glu-Arg82+Thr-Peptide	N	MS	Pro	Gln	Glu	Arg	Thr	Leu	Thr	Leu	Becker-Pauly et al., 2011
Hematological and neurological expressed 1 protein	Q9UK76	32-44	Leu-Gly-Phe-Asp35+Glu-Peptide	N	MS	Leu	Gly	Phe	Asp	Glu	Pro	Thr	Glu	Becker-Pauly et al., 2011
Heterogeneous nuclear ribonucleoprotein A1	P09651	338-352	Ser-Gly-Pro-Tyr341+Gly-Peptide	N	MS	Ser	Gly	Pro	Tyr	Gly	Gly	Gly	Gly	Becker-Pauly et al., 2011
Heterogeneous nuclear ribonucleoprotein A1	P09651	150-166	Phe-Val-Thr-Phe153+Asp-Peptide	N	MS	Phe	Val	Thr	Phe	Asp	Asp	His	Asp	Becker-Pauly et al., 2011
Heterogeneous nuclear ribonucleoprotein K	P61978	89-103	Ser-Ile-Ser-Ala92+Asp-Peptide	N	MS	Ser	Ile	Ser	Ala	Asp	Ile	Glu	Thr	Becker-Pauly et al., 2011
Heterogeneous nuclear ribonucleoprotein Q	O60506	155-168	Gly-Gln-Gln-Pro158+Ser-Peptide	N	MS	Gly	Gln	Gln	Pro	Ser	Val	Gly	Thr	Becker-Pauly et al., 2011
Heterogeneous nuclear ribonucleoprotein Q	O60506	67-81	Glu-Phe-Asn-Glu70+Asp-Peptide	N	MS	Glu	Phe	Asn	Glu	Asp	Gly	Ala	Leu	Becker-Pauly et al., 2011
Heterogeneous nuclear ribonucleoprotein R	O43390	398-415	Glu-Ile-Glu-Gly401+Glu-Peptide	N	MS	Glu	Ile	Glu	Gly	Glu	Glu	Ile	Glu	Becker-Pauly et al., 2011
Heterogeneous nuclear ribonucleoprotein U	Q00839	255-268	Arg-Gly-Tyr-Phe258+Glu-Peptide	N	MS	Arg	Gly	Tyr	Phe	Glu	Tyr	Ile	Glu	Becker-Pauly et al., 2011
Heterogeneous nuclear ribonucleoproteins A2/B1	P22626	75-89	Val-Asp-Ala-Ala78+Met-Peptide	N	MS	Val	Asp	Ala	Ala	Met	Ala	Ala	Arg	Becker-Pauly et al., 2011
Heterogeneous nuclear ribonucleoproteins A2/B1	P22626	157-173	Phe-Val-Thr-Phe160+Asp-Peptide	N	MS	Phe	Val	Thr	Phe	Asp	Asp	His	Asp	Becker-Pauly et al., 2011
Heterogeneous nuclear ribonucleoproteins A2/B1	P22626	160-173	Phe-Asp-Asp-His163+Asp-Peptide	N	MS	Phe	Asp	Asp	His	Asp	Pro	Val	Asp	Becker-Pauly et al., 2011
Heterogeneous nuclear ribonucleoproteins C1/C2	P07910	270-284	Asp-Asp-Asn-Glu273+Asp-Peptide	N	MS	Asp	Asp	Asn	Glu	Asp	Arg	Gly	Asp	Becker-Pauly et al., 2011
High mobility group nucleosome-binding domain-containing protein 3	Q15651	31-44	Ser-Ala-Lys-Pro34+Ala-Peptide	N	MS	Ser	Ala	Lys	Pro	Ala	Pro	Pro	Lys	Becker-Pauly et al., 2011
High mobility group nucleosome-binding domain-containing protein 3	Q15651	30-44	Leu-Ser-Ala-Lys33+Pro-Peptide	N	MS	Leu	Ser	Ala	Lys	Pro	Ala	Pro	Pro	Becker-Pauly et al., 2011
Histidine triad nucleotide-binding protein 1	P49773	44-57	Ile-Ser-Pro-Gln47+Ala-Peptide	N	MS	Ile	Ser	Pro	Gln	Ala	Pro	Thr	His	Becker-Pauly et al., 2011
Histidine triad nucleotide-binding protein 1	P49773	66-83	Ala-Glu-Asp-Asp69+Asp-Peptide	N	MS	Ala	Glu	Asp	Asp	Asp	Glu	Ser	Leu	Becker-Pauly et al., 2011
Histone H1.2	P16403	8-21	Ala-Pro-Ala-Ala11+Ala-Peptide	N	MS	Ala	Pro	Ala	Ala	Ala	Pro	Pro	Ala	Becker-Pauly et al., 2011
Histone H1.4	P10412	9-22	Pro-Ala-Ala-Pro12+Ala-Peptide	N	MS	Pro	Ala	Ala	Pro	Ala	Pro	Ala	Glu	Becker-Pauly et al., 2011
Histone H1.4	P10412	6-22	Pro-Ala-Ala-Pro9+Ala-Peptide	N	MS	Pro	Ala	Ala	Pro	Ala	Ala	Pro	Ala	Becker-Pauly et al., 2011
Histone H1.5	P16401	36-49	Arg-Lys-Ala-Thr39+Gly-Peptide	N	MS	Arg	Lys	Ala	Thr	Gly	Pro	Pro	Val	Becker-Pauly et al., 2011
Histone-binding protein RBBP7	Q16576	95-113	Ser-His-Cys-Asp98+Ser-Peptide	N	MS	Ser	His	Cys	Asp	Ser	Asp	Lys	Gly	Becker-Pauly et al., 2011
Hsc70-interacting protein	P50502	105-118	Glu-Ile-Thr-Glu108+Glu-Peptide	N	MS	Glu	Ile	Thr	Glu	Glu	Met	Met	Asp	Becker-Pauly et al., 2011
Importin subunit beta-1	Q14974	164-182	Glu-Gln-Leu-Gln167+Asp-Peptide	N	MS	Glu	Gln	Leu	Gln	Asp	Lys	Ser	Asn	Becker-Pauly et al., 2011
Inactive L-threonine 3-dehydrogenase, mitochondrial	Q8IZJ6	104-121	Leu-Asp-Tyr-Lys107+Asn-Peptide	N	MS	Leu	Asp	Tyr	Lys	Asn	Leu	Arg	Glu	Becker-Pauly et al., 2011
Inositol-trisphosphate 3-kinase A	P23677	39-55	Glu-Ala-Arg-Cys42+Ala-Peptide	N	MS	Glu	Ala	Arg	Cys	Ala	Ala	Val	Ala	Becker-Pauly et al., 2011
Insulin receptor substrate 4	O14654	916-929	Asp-Ser-Ser-Ser919+Asp-Peptide	N	MS	Asp	Ser	Ser	Ser	Asp	Tyr	Val	Asn	Becker-Pauly et al., 2011
Interleukin enhancer-binding factor 3	Q12906	22-40	Tyr-Pro-Thr-Gln25+Glu-Peptide	N	MS	Tyr	Pro	Thr	Gln	Glu	Glu	Leu	Glu	Becker-Pauly et al., 2011
Keratin, type II cytoskeletal 8	P05787	70-88	Gln-Ser-Leu-Leu73+Ser-Peptide	N	MS	Gln	Ser	Leu	Leu	Ser	Pro	Leu	Val	Becker-Pauly et al., 2011
KH domain-containing, RNA-binding, signal transduction-associated protein 1	Q07666	138-152	Lys-Lys-Asp-Asp141+Glu-Peptide	N	MS	Lys	Lys	Asp	Asp	Glu	Glu	Asn	Tyr	Becker-Pauly et al., 2011
Kinesin-like protein KIF3B	O15066	718-733	Lys-Ser-Gly-Arg721+Lys-Peptide	N	MS	Lys	Ser	Gly	Arg	Lys	Ser	Gly	Ser	Becker-Pauly et al., 2011
L-lactate dehydrogenase A chain	P00338	286-305	Asp-Val-Phe-Leu289+Ser-Peptide	N	MS	Asp	Val	Phe	Leu	Ser	Val	Pro	Cys	Becker-Pauly et al., 2011
Leucine-rich PPR motif-containing protein, mitochondrial	P42704	272-287	Ala-Leu-Leu-Asn275+Ala-Peptide	N	MS	Ala	Leu	Leu	Asn	Ala	Tyr	Ala	Glu	Becker-Pauly et al., 2011
Leucine-rich repeat-containing protein 59	Q96AG4	17-33	Gly-Asn-Glu-Leu20+Asp-Peptide	N	MS	Gly	Asn	Glu	Leu	Asp	Leu	Ser	Leu	Becker-Pauly et al., 2011
Lupus La protein	P05455	370-384	His-Asp-Glu-His373+Asp-Peptide	N	MS	His	Asp	Glu	His	Asp	Glu	Asn	Gly	Becker-Pauly et al., 2011
Lupus La protein	P05455	304-317	Glu-Val-Leu-Glu307+Gly-Peptide	N	MS	Glu	Val	Leu	Glu	Gly	Glu	Val	Glu	Becker-Pauly et al., 2011
Lysosomal alpha-glucosidase	P10253	805-820	Val-Thr-Leu-Pro808+Ala-Peptide	N	MS	Val	Thr	Leu	Pro	Ala	Pro	Leu	Asp	Becker-Pauly et al., 2011
Malate dehydrogenase, cytoplasmic	P40925	207-220	Val-Gly-Val-Tyr210+Glu-Peptide	N	MS	Val	Gly	Val	Tyr	Glu	Ala	Leu	Lys	Becker-Pauly et al., 2011
Malate dehydrogenase, mitochondrial	P40926	53-74	Leu-Thr-Leu-Tyr56+Asp-Peptide	N	MS	Leu	Thr	Leu	Tyr	Asp	Ile	Ala	His	Becker-Pauly et al., 2011
Malate dehydrogenase, mitochondrial	P40926	57-74	Asp-Ile-Ala-His60+Thr-Peptide	N	MS	Asp	Ile	Ala	His	Thr	Pro	Gly	Val	Becker-Pauly et al., 2011
Mannosidase, beta A, lysosomal-like	A2A2E0	40-56	Ile-Ile-Val-Pro43+Ile-Peptide	N	MS	Ile	Ile	Val	Pro	Ile	Pro	Lys	Ser	Becker-Pauly et al., 2011
Matrin-3	P43243	272-287	Ala-Pro-Pro-Ser275+Ser-Peptide	N	MS	Ala	Pro	Pro	Ser	Ser	Asn	Ile	Glu	Becker-Pauly et al., 2011
Mesencephalic astrocyte-derived neurotrophic factor	P55145	47-62	Asp-Val-Thr-Phe51+Ser-Peptide	N	MS	Asp	Val	Thr	Phe	Ser	Pro	Ala	Thr	Becker-Pauly et al., 2011
Mesothelin-like protein	Q96KJ4	671-685	Val-Ala-Ser-Gly674+Trp-Peptide	N	MS	Val	Ala	Ser	Gly	Trp	Leu	Gly	Ser	Becker-Pauly et al., 2011
MICAL-like protein 1	Q8N3F8	657-670	Val-Arg-Pro-Pro660+Ala-Peptide	N	MS	Val	Arg	Pro	Pro	Ala	Pro	Gly	His	Becker-Pauly et al., 2011
Microtubule-associated protein 1B	P46821	610-623	Lys-Glu-Glu-Pro613+Ser-Peptide	N	MS	Lys	Glu	Glu	Pro	Ser	Pro	Val	Lys	Becker-Pauly et al., 2011
Midnolin	Q504T8	197-216	Ser-Ala-Ala-Arg200+Val-Peptide	N	MS	Ser	Ala	Ala	Arg	Val	Pro	Pro	Val	Becker-Pauly et al., 2011
Midnolin	Q504T8	160-179	His-Ala-Pro-Leu163+Gln-Peptide	N	MS	His	Ala	Pro	Leu	Gln	His	Arg	His	Becker-Pauly et al., 2011
Monocarboxylate transporter 3	O95907	213-230	Ala-Gly-Asp-Ala216+Pro-Peptide	N	MS	Ala	Gly	Asp	Ala	Pro	Gly	Glu	Ala	Becker-Pauly et al., 2011
Multiple inositol polyphosphate phosphatase 1	Q9UNW1-3	266-281	Ala-Ala-Thr-Leu269+Gln-Peptide	N	MS	Ala	Ala	Thr	Leu	Gln	Val	Pro	Val	Becker-Pauly et al., 2011
Myosin-10	P35580	218-232	Leu-Leu-Gln-Ala221+Asn-Peptide	N	MS	Leu	Leu	Gln	Ala	Asn	Pro	Ile	Leu	Becker-Pauly et al., 2011
Myosin-9	P35579	1504-1518	Thr-Glu-Met-Glu1507+Asp-Peptide	N	MS	Thr	Glu	Met	Glu	Asp	Leu	Met	Ser	Becker-Pauly et al., 2011
Myosin-9	P35579	1196-1210	Gln-Ala-Val-Glu1199+Glu-Peptide	N	MS	Gln	Ala	Val	Glu	Glu	Leu	Ala	Glu	Becker-Pauly et al., 2011
Myosin-9	P35579	1420-1433	Gln-Glu-Leu-Asp1423+Asp-Peptide	N	MS	Gln	Glu	Leu	Asp	Asp	Leu	Leu	Val	Becker-Pauly et al., 2011
Myristoylated alanine-rich C-kinase substrate	P29966	91-105	Ala-Ala-Ala-Ala94+Ala-Peptide	N	MS	Ala	Ala	Ala	Ala	Ala	Pro	Glu	Ala	Becker-Pauly et al., 2011
NADH-cytochrome b5 reductase 3	P00387	98-111	Ser-Ser-Asp-Asp101+Asp-Peptide	N	MS	Ser	Ser	Asp	Asp	Asp	Lys	Gly	Phe	Becker-Pauly et al., 2011
Neurabin-2	Q96SB3	131-143	Ser-Ala-Gln-Pro134+Ala-Peptide	N	MS	Ser	Ala	Gln	Pro	Ala	Pro	Pro	Pro	Becker-Pauly et al., 2011
Neurexin-3-beta	Q9HDB5	462-476	Glu-Thr-Ser-Arg465+Thr-Peptide	N	MS	Glu	Thr	Ser	Arg	Thr	Thr	Thr	Thr	Becker-Pauly et al., 2011
Neutral alpha-glucosidase AB	Q14697	254-267	Glu-His-Val-Tyr257+Gly-Peptide	N	MS	Glu	His	Val	Tyr	Gly	Ile	Pro	Glu	Becker-Pauly et al., 2011
Nuclear autoantigenic sperm protein	P49321	24-45	Val-Pro-Ala-Pro27+Ser-Peptide	N	MS	Val	Pro	Ala	Pro	Ser	Thr	Ser	Ala	Becker-Pauly et al., 2011
Nuclear autoantigenic sperm protein	P49321	22-45	Glu-Asp-Val-Pro25+Ala-Peptide	N	MS	Glu	Asp	Val	Pro	Ala	Pro	Ser	Thr	Becker-Pauly et al., 2011
Nuclear autoantigenic sperm protein	P49321	59-75	Ile-Pro-Ala-Ala62+Val-Peptide	N	MS	Ile	Pro	Ala	Ala	Val	Asn	Ala	Phe	Becker-Pauly et al., 2011
Nuclease-sensitive element-binding protein 1	P67809	218-234	Met-Glu-Gly-Ala221+Asp-Peptide	N	MS	Met	Glu	Gly	Ala	Asp	Asn	Gln	Gly	Becker-Pauly et al., 2011
Nucleolar protein 58	Q9Y2X3	105-117	Ser-Cys-Ile-His108+Ser-Peptide	N	MS	Ser	Cys	Ile	His	Ser	Pro	Val	Val	Becker-Pauly et al., 2011
Nucleolin	P19338	628-648	Glu-Ala-Met-Glu631+Asp-Peptide	N	MS	Glu	Ala	Met	Glu	Asp	Gly	Glu	Ile	Becker-Pauly et al., 2011
Nucleolin	P19338	629-648	Ala-Met-Glu-Asp632+Gly-Peptide	N	MS	Ala	Met	Glu	Asp	Gly	Glu	Ile	Asp	Becker-Pauly et al., 2011
Nucleophosmin	P06748	181-194	Phe-Asp-Asp-Glu184+Glu-Peptide	N	MS	Phe	Asp	Asp	Glu	Glu	Ala	Glu	Glu	Becker-Pauly et al., 2011
Nucleophosmin	P06748	179-194	Asp-Asp-Phe-Asp182+Asp-Peptide	N	MS	Asp	Asp	Phe	Asp	Asp	Glu	Glu	Ala	Becker-Pauly et al., 2011
Nucleophosmin	P06748	32-45	Lys-Val-Asp-Asn35+Asp-Peptide	N	MS	Lys	Val	Asp	Asn	Asp	Glu	Asn	Glu	Becker-Pauly et al., 2011
Nucleophosmin	P06748	66-80	Asn-Tyr-Glu-Gly69+Ser-Peptide	N	MS	Asn	Tyr	Glu	Gly	Ser	Pro	Ile	Lys	Becker-Pauly et al., 2011
Nucleophosmin	P06748	277-291	Arg-Met-Thr-Asp280+Gln-Peptide	N	MS	Arg	Met	Thr	Asp	Gln	Glu	Ala	Ile	Becker-Pauly et al., 2011
Nucleophosmin	P06748	278-291	Met-Thr-Asp-Gln281+Glu-Peptide	N	MS	Met	Thr	Asp	Gln	Glu	Ala	Ile	Gln	Becker-Pauly et al., 2011
Nucleoside diphosphate kinase B	P22392	3-18	Asn-Leu-Glu-Arg6+Thr-Peptide	N	MS	Asn	Leu	Glu	Arg	Thr	Phe	Ile	Ala	Becker-Pauly et al., 2011
Ornithine aminotransferase, mitochondrial	P04181	277-292	Ala-Val-Asp-Tyr280+Glu-Peptide	N	MS	Ala	Val	Asp	Tyr	Glu	Asn	Val	Arg	Becker-Pauly et al., 2011
Pachytene checkpoint protein 2 homolog	Q15645	14-28	Cys-Val-Ala-Glu17+Ser-Peptide	N	MS	Cys	Val	Ala	Glu	Ser	Pro	Thr	Val	Becker-Pauly et al., 2011
Pancreas/duodenum homeobox protein 1	P52945	37-53	Tyr-Met-Gly-Arg40+Gln-Peptide	N	MS	Tyr	Met	Gly	Arg	Gln	Pro	Pro	Pro	Becker-Pauly et al., 2011
Pappalysin-1	Q13219	53-69	Arg-Gly-Arg-Arg56+Ala-Peptide	N	MS	Arg	Gly	Arg	Arg	Ala	Ser	Pro	Pro	Becker-Pauly et al., 2011
Peptidyl-prolyl cis-trans isomerase A	P62937	5-19	Thr-Val-Phe-Phe8+Asp-Peptide	N	MS	Thr	Val	Phe	Phe	Asp	Ile	Ala	Val	Becker-Pauly et al., 2011
Peptidyl-prolyl cis-trans isomerase A	P62937	76-91	Lys-Ser-Ile-Tyr79+Gly-Peptide	N	MS	Lys	Ser	Ile	Tyr	Gly	Glu	Lys	Phe	Becker-Pauly et al., 2011
Peptidyl-prolyl cis-trans isomerase FKBP4	Q02790	12-28	Gly-Ala-Gln-Ser15+Ala-Peptide	N	MS	Gly	Ala	Gln	Ser	Ala	Pro	Leu	Pro	Becker-Pauly et al., 2011
Peptidyl-prolyl cis-trans isomerase FKBP8	Q14318	106-119	Thr-Leu-Val-Pro109+Gly-Peptide	N	MS	Thr	Leu	Val	Pro	Gly	Pro	Pro	Gly	Becker-Pauly et al., 2011
Peroxiredoxin-1	Q06830	171-190	Glu-Val-Cys-Pro174+Ala-Peptide	N	MS	Glu	Val	Cys	Pro	Ala	Gly	Trp	Lys	Becker-Pauly et al., 2011
Peroxiredoxin-1	Q06830	94-110	Gln-Gly-Gly-Leu97+Gly-Peptide	N	MS	Gln	Gly	Gly	Leu	Gly	Pro	Met	Asn	Becker-Pauly et al., 2011
Peroxiredoxin-5, mitochondrial	P30044	66-83	Glu-Val-Phe-Glu69+Gly-Peptide	N	MS	Glu	Val	Phe	Glu	Gly	Glu	Pro	Gly	Becker-Pauly et al., 2011
Peroxiredoxin-6	P30041	5-22	Leu-Leu-Leu-Gly8+Asp-Peptide	N	MS	Leu	Leu	Leu	Gly	Asp	Val	Ala	Pro	Becker-Pauly et al., 2011
Peroxiredoxin-6	P30041	89-106	Tyr-Asn-Cys-Glu92+Glu-Peptide	N	MS	Tyr	Asn	Cys	Glu	Glu	Pro	Thr	Glu	Becker-Pauly et al., 2011
Phosphatase and actin regulator 4	Q8IZ21	322-336	Glu-Arg-Glu-Lys325+Ser-Peptide	N	MS	Glu	Arg	Glu	Lys	Ser	Thr	Cys	Ser	Becker-Pauly et al., 2011
Phosphoglycerate kinase 1	P00558	108-123	Cys-Ala-Asn-Pro111+Ala-Peptide	N	MS	Cys	Ala	Asn	Pro	Ala	Ala	Gly	Ser	Becker-Pauly et al., 2011
Phosphoglycerate mutase 1	P18669	148-162	Asp-Gln-Leu-Pro151+Ser-Peptide	N	MS	Asp	Gln	Leu	Pro	Ser	Cys	Glu	Ser	Becker-Pauly et al., 2011
Phosphoglycerate mutase 1	P18669	144-162	Asp-Leu-Thr-Glu147+Asp-Peptide	N	MS	Asp	Leu	Thr	Glu	Asp	Gln	Leu	Pro	Becker-Pauly et al., 2011
Phosphoribosylformylglycinamidine synthase	O15067	168-181	Glu-Pro-Leu-Asn171+Gly-Peptide	N	MS	Glu	Pro	Leu	Asn	Gly	Pro	Ile	Asn	Becker-Pauly et al., 2011
Plasminogen activator inhibitor 1 RNA-binding protein	Q8NC51	54-68	Ala-Ala-Gln-Ala57+Ala-Peptide	N	MS	Ala	Ala	Gln	Ala	Ala	Ala	Gln	Thr	Becker-Pauly et al., 2011
Plastin-3	P13797	30-42	Gly-Phe-Ile-Cys33+Asp-Peptide	N	MS	Gly	Phe	Ile	Cys	Asp	Tyr	Glu	Leu	Becker-Pauly et al., 2011
Poly [ADP-ribose] polymerase 1	P09874	780-796	Gly-Gly-Ser-Asp783+Asp-Peptide	N	MS	Gly	Gly	Ser	Asp	Asp	Ser	Ser	Lys	Becker-Pauly et al., 2011
Poly [ADP-ribose] polymerase 1	P09874	372-394	Ser-Thr-Ala-Ser375+Ala-Peptide	N	MS	Ser	Thr	Ala	Ser	Ala	Pro	Ala	Ala	Becker-Pauly et al., 2011
Poly [ADP-ribose] polymerase 1	P09874	600-616	Lys-Leu-Glu-Gln603+Met-Peptide	N	MS	Lys	Leu	Glu	Gln	Met	Pro	Ser	Lys	Becker-Pauly et al., 2011
Poly [ADP-ribose] polymerase 1	P09874	453-467	Val-Val-Ser-Glu456+Asp-Peptide	N	MS	Val	Val	Ser	Glu	Asp	Phe	Leu	Gln	Becker-Pauly et al., 2011
Poly [ADP-ribose] polymerase 1	P09874	239-254	Lys-Ala-Gln-Asn242+Asp-Peptide	N	MS	Lys	Ala	Gln	Asn	Asp	Leu	Ile	Trp	Becker-Pauly et al., 2011
Poly(U)-binding-splicing factor PUF60	Q9UHX1	19-43	Glu-Pro-Ala-Ala22+Ala-Peptide	N	MS	Glu	Pro	Ala	Ala	Ala	Ala	Ala	Val	Becker-Pauly et al., 2011
Poly(U)-binding-splicing factor PUF60	Q9UHX1	402-416	Pro-Ile-Leu-Ala405+Ser-Peptide	N	MS	Pro	Ile	Leu	Ala	Ser	Pro	Pro	Thr	Becker-Pauly et al., 2011
Polyadenylate-binding protein 4	Q13310	200-216	Glu-Glu-Val-Asp203+Asp-Peptide	N	MS	Glu	Glu	Val	Asp	Asp	Glu	Ser	Leu	Becker-Pauly et al., 2011
POTE ankyrin domain family member E	Q6S8J3	922-938	Asp-Phe-Glu-Gln925+Glu-Peptide	N	MS	Asp	Phe	Glu	Gln	Glu	Met	Ala	Thr	Becker-Pauly et al., 2011
POTE ankyrin domain family member E	Q6S8J3	920-938	Ala-Leu-Asp-Phe923+Glu-Peptide	N	MS	Ala	Leu	Asp	Phe	Glu	Gln	Glu	Met	Becker-Pauly et al., 2011
POTE ankyrin domain family member I	P0CG38	725-739	Asp-Ala-Pro-Arg728+Ala-Peptide	N	MS	Asp	Ala	Pro	Arg	Ala	Val	Phe	Pro	Becker-Pauly et al., 2011
POTE ankyrin domain family member J	P0CG39	1022-1035	Lys-Gln-Glu-Tyr1025+Asp-Peptide	N	MS	Lys	Gln	Glu	Tyr	Asp	Glu	Ser	Gly	Becker-Pauly et al., 2011
Pre-mRNA-processing-splicing factor 8	Q6P2Q9	2185-2198	Ser-Pro-Gln-Leu2188+Ser-Peptide	N	MS	Ser	Pro	Gln	Leu	Ser	Pro	Gln	Asp	Becker-Pauly et al., 2011
Probable ATP-dependent RNA helicase DDX46	Q7L014	836-853	Ser-Ser-Val-Pro839+Ala-Peptide	N	MS	Ser	Ser	Val	Pro	Ala	Pro	Thr	Ala	Becker-Pauly et al., 2011
Probable ATP-dependent RNA helicase DDX5	P17844	148-164	Tyr-Leu-Leu-Pro151+Ala-Peptide	N	MS	Tyr	Leu	Leu	Pro	Ala	Ile	Val	His	Becker-Pauly et al., 2011
Probable phosphoglycerate mutase 4	Q8N0Y7	123-138	Pro-Pro-Pro-Met126+Glu-Peptide	N	MS	Pro	Pro	Pro	Met	Glu	Pro	Asp	His	Becker-Pauly et al., 2011
Probable ubiquitin carboxyl-terminal hydrolase FAF-X	Q93008	60-74	Leu-Glu-Asp-Glu63+Glu-Peptide	N	MS	Leu	Glu	Asp	Glu	Glu	Pro	Ala	Phe	Becker-Pauly et al., 2011
Prohibitin-2	Q99623	57-71	Gly-Val-Gln-Gln60+Asp-Peptide	N	MS	Gly	Val	Gln	Gln	Asp	Thr	Ile	Leu	Becker-Pauly et al., 2011
Protein disulfide-isomerase	P07237	214-230	Asn-Asn-Phe-Glu217+Gly-Peptide	N	MS	Asn	Asn	Phe	Glu	Gly	Glu	Val	Thr	Becker-Pauly et al., 2011
Protein disulfide-isomerase A4	P13667	280-294	Ile-Glu-Gln-Ser283+Gly-Peptide	N	MS	Ile	Glu	Gln	Ser	Gly	Pro	Pro	Ser	Becker-Pauly et al., 2011
Protein disulfide-isomerase A4	P13667	378-391	Gly-Ser-Thr-Gln381+Asp-Peptide	N	MS	Gly	Ser	Thr	Gln	Asp	Ser	Ala	Ile	Becker-Pauly et al., 2011
Protein FAM43B	Q6ZT52	132-145	Ser-Gly-Gly-Arg135+Arg-Peptide	N	MS	Ser	Gly	Gly	Arg	Arg	Pro	Ala	His	Becker-Pauly et al., 2011
Protein FAM78B	Q5VT40	117-130	Asn-Thr-Thr-Glu120+Thr-Peptide	N	MS	Asn	Thr	Thr	Glu	Thr	Val	Thr	Leu	Becker-Pauly et al., 2011
Protein phosphatase 1G	O15355	234-250	Thr-Gly-Glu-Ala237+Gly-Peptide	N	MS	Thr	Gly	Glu	Ala	Gly	Pro	Ser	Cys	Becker-Pauly et al., 2011
Protein transport protein Sec23A	Q15436	683-699	His-Leu-Leu-Gln686+Ala-Peptide	N	MS	His	Leu	Leu	Gln	Ala	Pro	Val	Asp	Becker-Pauly et al., 2011
Protein-L-isoaspartate(D-aspartate) O-methyltransferase	P22061	206-221	Lys-Pro-Leu-Met209+Gly-Peptide	N	MS	Lys	Pro	Leu	Met	Gly	Val	Ile	Tyr	Becker-Pauly et al., 2011
Protein-L-isoaspartate(D-aspartate) O-methyltransferase	P23506	158-178	Val-Gly-Ala-Ala161+Ala-Peptide	N	MS	Val	Gly	Ala	Ala	Ala	Pro	Val	Val	Becker-Pauly et al., 2011
Purine nucleoside phosphorylase	P00491	5-22	Tyr-Thr-Tyr-Glu8+Asp-Peptide	N	MS	Tyr	Thr	Tyr	Glu	Asp	Tyr	Lys	Asn	Becker-Pauly et al., 2011
Purine nucleoside phosphorylase	P00491	4-22	Gly-Tyr-Thr-Tyr7+Glu-Peptide	N	MS	Gly	Tyr	Thr	Tyr	Glu	Asp	Tyr	Lys	Becker-Pauly et al., 2011
Putative heat shock 70 kDa protein 7	P48741	298-313	Ser-Ile-Thr-Arg301+Ala-Peptide	N	MS	Ser	Ile	Thr	Arg	Ala	Arg	Phe	Glu	Becker-Pauly et al., 2011
Putative N-acetylated-alpha-linked acidic dipeptidase	Q9HBA9	419-433	Asp-Val-Lys-Arg422+Gln-Peptide	N	MS	Asp	Val	Lys	Arg	Gln	Ile	Ser	Val	Becker-Pauly et al., 2011
Putative Ras-related protein Rab-1C	Q92928	137-153	Lys-Glu-Phe-Ala140+Asp-Peptide	N	MS	Lys	Glu	Phe	Ala	Asp	Ser	Leu	Gly	Becker-Pauly et al., 2011
Putative uncharacterized protein LOC338862	A4QMX1	42-57	Thr-Ile-Ile-Val45+Glu-Peptide	N	MS	Thr	Ile	Ile	Val	Glu	Asp	Val	Asn	Becker-Pauly et al., 2011
Pyruvate kinase isozymes M1/M2	P14618	102-115	Pro-Ile-Leu-Tyr105+Arg-Peptide	N	MS	Pro	Ile	Leu	Tyr	Arg	Pro	Val	Ala	Becker-Pauly et al., 2011
Pyruvate kinase isozymes M1/M2	P14618	209-224	Val-Asn-Leu-Pro212+Gly-Peptide	N	MS	Val	Asn	Leu	Pro	Gly	Ala	Ala	Val	Becker-Pauly et al., 2011
Pyruvate kinase isozymes M1/M2	P14618	19-32	His-Ala-Ala-Met22+Ala-Peptide	N	MS	His	Ala	Ala	Met	Ala	Asp	Thr	Phe	Becker-Pauly et al., 2011
Pyruvate kinase isozymes M1/M2	P14618	17-32	Gln-Leu-His-Ala20+Ala-Peptide	N	MS	Gln	Leu	His	Ala	Ala	Met	Ala	Asp	Becker-Pauly et al., 2011
Pyruvate kinase isozymes M1/M2	P14618	278-294	Arg-Arg-Phe-Asp281+Glu-Peptide	N	MS	Arg	Arg	Phe	Asp	Glu	Ile	Leu	Glu	Becker-Pauly et al., 2011
Pyruvate kinase isozymes M1/M2	P14618	324-336	Val-Ile-Cys-Ala327+Thr-Peptide	N	MS	Val	Ile	Cys	Ala	Thr	Gln	Met	Leu	Becker-Pauly et al., 2011
Ran-specific GTPase-activating protein	P43487	24-39	Asp-Pro-Gln-Phe27+Glu-Peptide	N	MS	Asp	Pro	Gln	Phe	Glu	Pro	Ile	Val	Becker-Pauly et al., 2011
Reticulon-4	Q9NQC3	11-24	Ser-Ser-Ser-Asp14+Ser-Peptide	N	MS	Ser	Ser	Ser	Asp	Ser	Pro	Pro	Arg	Becker-Pauly et al., 2011
Rho GDP-dissociation inhibitor 1	P52565	17-33	Glu-Asn-Glu-Glu20+Asp-Peptide	N	MS	Glu	Asn	Glu	Glu	Asp	Glu	His	Ser	Becker-Pauly et al., 2011
Rho GDP-dissociation inhibitor 1	P52565	34-50	Ser-IIe-Gln-Glu37+IIe-Peptide	N	MS	Ser	Ile	Gln	Glu	Ile	Gln	Glu	Leu	Becker-Pauly et al., 2011
Rho GDP-dissociation inhibitor 2	P52566	150-164	Pro-Glu-Glu-Tyr153+Glu-Peptide	N	MS	Pro	Glu	Glu	Tyr	Glu	Phe	Leu	Thr	Becker-Pauly et al., 2011
RNA binding protein fox-1 homolog 3	A6NFN3	298-312	His-His-Thr-Ile301+Gly-Peptide	N	MS	His	His	Thr	Ile	Gly	Pro	Ala	Ala	Becker-Pauly et al., 2011
RNA-binding protein EWS	Q01844	616-632	Gly-Gly-Pro-Gly619+Gly-Peptide	N	MS	Gly	Gly	Pro	Gly	Gly	Pro	Pro	Gly	Becker-Pauly et al., 2011
RuvB-like 1	Q9Y265	385-400	Asn-Ile-Ser-Glu388+Glu-Peptide	N	MS	Asn	Ile	Ser	Glu	Glu	Ala	Leu	Asn	Becker-Pauly et al., 2011
RuvB-like 1	Q9Y265	342-357	Glu-Asp-Ile-Thr345+Ser-Peptide	N	MS	Glu	Asp	Ile	Thr	Ser	Pro	His	Gly	Becker-Pauly et al., 2011
RuvB-like 2	Q9Y230	317-330	Glu-Ser-Asp-Met320+Ala-Peptide	N	MS	Glu	Ser	Asp	Met	Ala	Pro	Val	Leu	Becker-Pauly et al., 2011
Secretory carrier-associated membrane protein 3	O14828	87-101	Ser-Thr-Gln-Ala90+Ser-Peptide	N	MS	Ser	Thr	Gln	Ala	Ser	Ala	Ala	Ala	Becker-Pauly et al., 2011
Serine-threonine kinase receptor-associated protein	Q9Y3F4	88-100	Ala-Val-Ser-Gly91+Asp-Peptide	N	MS	Ala	Val	Ser	Gly	Asp	Glu	Leu	Met	Becker-Pauly et al., 2011
Serine-threonine kinase receptor-associated protein	Q9Y3F4	46-59	Gly-Asp-Thr-Gly49+Asp-Peptide	N	MS	Gly	Asp	Thr	Gly	Asp	Trp	Ile	Gly	Becker-Pauly et al., 2011
Serine/threonine-protein kinase LMTK2	Q8IWU2	735-750	Ser-Leu-Ser-Ser738+Lys-Peptide	N	MS	Ser	Leu	Ser	Ser	Lys	Glu	His	Ile	Becker-Pauly et al., 2011
Serine/threonine-protein kinase PAK 2	Q13177	200-216	Asp-Pro-Val-Pro203+Ala-Peptide	N	MS	Asp	Pro	Val	Pro	Ala	Pro	Val	Gly	Becker-Pauly et al., 2011
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform	P30153	119-133	His-Ser-Pro-Ser122+Asp-Peptide	N	MS	His	Ser	Pro	Ser	Asp	Leu	Glu	Ala	Becker-Pauly et al., 2011
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform	P30153	116-133	Ser-His-Glu-His119+Ser-Peptide	N	MS	Ser	His	Glu	His	Ser	Pro	Ser	Asp	Becker-Pauly et al., 2011
Sjoegren syndrome/scleroderma autoantigen 1	O60232	110-133	Gly-Ser-Arg-Pro113+Ala-Peptide	N	MS	Gly	Ser	Arg	Pro	Ala	Pro	Gln	Pro	Becker-Pauly et al., 2011
Small nuclear ribonucleoprotein-associated protein N	P63162	118-132	Val-Pro-Ile-Pro121+Gln-Peptide	N	MS	Val	Pro	Ile	Pro	Gln	Ala	Pro	Ala	Becker-Pauly et al., 2011
Small nuclear ribonucleoprotein-associated proteins B and B'	P14678	116-132	Ala-Gly-Val-Pro119+Met-Peptide	N	MS	Ala	Gly	Val	Pro	Met	Pro	Gln	Ala	Becker-Pauly et al., 2011
Splicing factor 1	Q15637	196-217	Leu-Pro-Gly-Glu199+Asp-Peptide	N	MS	Leu	Pro	Gly	Glu	Asp	Glu	Pro	Leu	Becker-Pauly et al., 2011
Splicing factor 3A subunit 1	Q15459	613-625	Val-Ile-Ala-Pro616+Met-Peptide	N	MS	Val	Ile	Ala	Pro	Met	Pro	Pro	Ile	Becker-Pauly et al., 2011
Splicing factor 3A subunit 1	Q15459	512-531	Thr-Gln-Gln-Ala515+Ala-Peptide	N	MS	Thr	Gln	Gln	Ala	Ala	Gln	Ala	Asn	Becker-Pauly et al., 2011
Splicing factor 3B subunit 1	O75533	94-111	Ile-Pro-Gln-Ser97+Thr-Peptide	N	MS	Ile	Pro	Gln	Ser	Thr	Glu	Gln	Tyr	Becker-Pauly et al., 2011
Splicing factor 3B subunit 2	Q13435	119-134	Phe-Pro-Met-Ala122+His-Peptide	N	MS	Phe	Pro	Met	Ala	His	Pro	Pro	Asn	Becker-Pauly et al., 2011
Splicing factor 3B subunit 4	Q15427	33-46	Phe-Leu-Gln-Ala36+Gly-Peptide	N	MS	Phe	Leu	Gln	Ala	Gly	Pro	Val	Val	Becker-Pauly et al., 2011
Splicing factor U2AF 65 kDa subunit	P26368	244-260	Val-Tyr-Val-Pro247+Gly-Peptide	N	MS	Val	Tyr	Val	Pro	Gly	Val	Val	Ser	Becker-Pauly et al., 2011
Splicing factor U2AF 65 kDa subunit	P26368	133-146	Thr-Pro-Thr-Pro136+Val-Peptide	N	MS	Thr	Pro	Thr	Pro	Val	Pro	Val	Val	Becker-Pauly et al., 2011
Splicing factor, proline- and glutamine-rich	P23246	521-536	Ser-Glu-Met-Glu524+Asp-Peptide	N	MS	Ser	Glu	Met	Glu	Asp	Ala	Tyr	His	Becker-Pauly et al., 2011
Splicing factor, proline- and glutamine-rich	P23246	520-536	Glu-Ser-Glu-Met523+Glu-Peptide	N	MS	Glu	Ser	Glu	Met	Glu	Asp	Ala	Tyr	Becker-Pauly et al., 2011
Staphylococcal nuclease domain-containing protein 1	Q7KZF4	121-135	Glu-Asn-Ile-Ala124+Glu-Peptide	N	MS	Glu	Asn	Ile	Ala	Glu	Ser	Leu	Val	Becker-Pauly et al., 2011
Stress-70 protein, mitochondrial	P38646	582-595	Val-Asn-Met-Ala585+Glu-Peptide	N	MS	Val	Asn	Met	Ala	Glu	Gly	Ile	Ile	Becker-Pauly et al., 2011
Stress-70 protein, mitochondrial	P38646	369-391	Ala-Met-Gln-Asp372+Ala-Peptide	N	MS	Ala	Met	Gln	Asp	Ala	Glu	Val	Ser	Becker-Pauly et al., 2011
Structural maintenance of chromosomes protein 1A	Q14683	64-77	Leu-Ile-His-Gly67+Ala-Peptide	N	MS	Leu	Ile	His	Gly	Ala	Pro	Val	Gly	Becker-Pauly et al., 2011
SUMO-1 activating enzyme subunit 1, isoform CRA_c	Q9UBE0-3	263-278	Glu-Gly-Glu-Trp266+Asp-Peptide	N	MS	Glu	Gly	Glu	Trp	Asp	Cys	Gly	Val	Becker-Pauly et al., 2011
Superoxide dismutase [Cu-Zn]	P00441	58-70	Cys-Thr-Ser-Ala61+Gly-Peptide	N	MS	Cys	Thr	Ser	Ala	Gly	Pro	His	Phe	Becker-Pauly et al., 2011
Superoxide dismutase [Cu-Zn]	P00441	98-116	Val-Ser-Ile-Glu101+Asp-Peptide	N	MS	Val	Ser	Ile	Glu	Asp	Ser	Val	Ile	Becker-Pauly et al., 2011
Superoxide dismutase [Cu-Zn]	P00441	9-24	Leu-Lys-Gly-Asp12+Gly-Peptide	N	MS	Leu	Lys	Gly	Asp	Gly	Pro	Val	Gln	Becker-Pauly et al., 2011
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5	O60264	226-238	Arg-Asn-Ile-Pro229+Gly-Peptide	N	MS	Arg	Asn	Ile	Pro	Gly	Pro	His	Met	Becker-Pauly et al., 2011
Symplekin	Q92797	1129-1142	Ala-Pro-Ala-Pro1132+Arg-Peptide	N	MS	Ala	Pro	Ala	Pro	Arg	Pro	Pro	Gln	Becker-Pauly et al., 2011
T-complex protein 1 subunit beta	P78371	414-427	Glu-Met-Leu-Met417+Ala-Peptide	N	MS	Glu	Met	Leu	Met	Ala	His	Ala	Val	Becker-Pauly et al., 2011
T-complex protein 1 subunit beta	P78371	453-466	Asn-Ala-Gly-Tyr456+Asp-Peptide	N	MS	Asn	Ala	Gly	Tyr	Asp	Ser	Ala	Asp	Becker-Pauly et al., 2011
T-complex protein 1 subunit beta	P78371	208-223	Ser-Leu-Ala-Asp211+Ser-Peptide	N	MS	Ser	Leu	Ala	Asp	Ser	Tyr	Leu	Asp	Becker-Pauly et al., 2011
T-complex protein 1 subunit delta	P50991	180-193	Ser-Ser-Leu-Leu183+Ser-Peptide	N	MS	Ser	Ser	Leu	Leu	Ser	Pro	Met	Ser	Becker-Pauly et al., 2011
T-complex protein 1 subunit epsilon	P48643	304-323	Trp-Gly-Phe-Asp307+Asp-Peptide	N	MS	Trp	Gly	Phe	Asp	Asp	Glu	Ala	Asn	Becker-Pauly et al., 2011
T-complex protein 1 subunit gamma	P49368	338-353	Leu-Arg-Glu-Asp341+Asp-Peptide	N	MS	Leu	Arg	Glu	Asp	Asp	Val	Gly	Thr	Becker-Pauly et al., 2011
T-complex protein 1 subunit gamma	P49368	400-425	Asn-Val-Leu-Leu403+Asp-Peptide	N	MS	Asn	Val	Leu	Leu	Asp	Pro	Gln	Leu	Becker-Pauly et al., 2011
T-complex protein 1 subunit zeta	P40227	451-465	Leu-Ala-Gln-Asn454+Ser-Peptide	N	MS	Leu	Ala	Gln	Asn	Ser	Gly	Phe	Asp	Becker-Pauly et al., 2011
TBC1 domain family member 8	O95759	529-542	Pro-Gly-Tyr-Tyr532+Gly-Peptide	N	MS	Pro	Gly	Tyr	Tyr	Gly	Asn	Leu	Val	Becker-Pauly et al., 2011
Thymosin beta-10	P63313	4-17	Lys-Pro-Asp-Met7+Gly-Peptide	N	MS	Lys	Pro	Asp	Met	Gly	Glu	Ile	Ala	Becker-Pauly et al., 2011
TOR1AIP1	E9PKD1	179-193	Ser-Ile-Gln-Glu182+Ala-Peptide	N	MS	Ser	Ile	Gln	Glu	Ala	Pro	Ala	Val	Becker-Pauly et al., 2011
Transcription elongation factor B polypeptide 2	Q15370	67-80	Ala-Arg-Pro-Gln70+Ala-Peptide	N	MS	Ala	Arg	Pro	Gln	Ala	Pro	Ala	Thr	Becker-Pauly et al., 2011
Transcription elongation factor B polypeptide 3	Q14241	757-773	Ser-Ala-His-Leu760+Ala-Peptide	N	MS	Ser	Ala	His	Leu	Ala	Pro	Val	Val	Becker-Pauly et al., 2011
Transcription intermediary factor 1-beta	Q13263	774-790	Lys-Leu-Thr-Glu777+Asp-Peptide	N	MS	Lys	Leu	Thr	Glu	Asp	Lys	Ala	Asp	Becker-Pauly et al., 2011
Transcription intermediary factor 1-beta	Q13263	535-553	Gly-Thr-Ala-Pro538+Ala-Peptide	N	MS	Gly	Thr	Ala	Pro	Ala	Gly	Thr	Pro	Becker-Pauly et al., 2011
Transcription intermediary factor 1-beta	Q13263	46-69	Ala-Ala-Ala-Ser49+Ser-Peptide	N	MS	Ala	Ala	Ala	Ser	Ser	Pro	Ala	Gly	Becker-Pauly et al., 2011
Transcription intermediary factor 1-beta	Q13263	53-69	Gly-Gly-Gly-Ala56+Glu-Peptide	N	MS	Gly	Gly	Gly	Ala	Glu	Ala	Leu	Glu	Becker-Pauly et al., 2011
Transitional endoplasmic reticulum ATPase	P55072	491-505	Glu-Leu-Val-Gln494+Tyr-Peptide	N	MS	Glu	Leu	Val	Gln	Tyr	Pro	Val	Glu	Becker-Pauly et al., 2011
Transketolase	P29401	288-302	Pro-Pro-Gln-Glu291+Asp-Peptide	N	MS	Pro	Pro	Gln	Glu	Asp	Ala	Pro	Ser	Becker-Pauly et al., 2011
Transketolase	P29401	289-302	Pro-Gln-Glu-Asp292+Ala-Peptide	N	MS	Pro	Gln	Glu	Asp	Ala	Pro	Ser	Val	Becker-Pauly et al., 2011
Transmembrane protein 151A	Q8N4L1	314-330	Gln-Val-Glu-Lys317+Leu-Peptide	N	MS	Gln	Val	Glu	Lys	Leu	Phe	Gly	Ala	Becker-Pauly et al., 2011
Transmembrane protein 79	Q5SZX3	58-71	Gln-Pro-Gly-Arg61+Ala-Peptide	N	MS	Gln	Pro	Gly	Arg	Ala	Phe	His	Leu	Becker-Pauly et al., 2011
Trifunctional purine biosynthetic protein adenosine-3	P22102	91-108	Val-Gln-Cys-Phe94+Gly-Peptide	N	MS	Val	Gln	Cys	Phe	Gly	Pro	Thr	Ala	Becker-Pauly et al., 2011
Trifunctional purine biosynthetic protein adenosine-3	P22102	235-249	Ala-Tyr-Cys-Pro238+Ala-Peptide	N	MS	Ala	Tyr	Cys	Pro	Ala	Pro	Gln	Val	Becker-Pauly et al., 2011
Triosephosphate isomerase	P60174	76-90	Glu-Val-Val-Cys79+Ala-Peptide	N	MS	Glu	Val	Val	Cys	Ala	Pro	Pro	Thr	Becker-Pauly et al., 2011
Triosephosphate isomerase	P60174	257-285	Glu-Leu-Ala-Ser260+Gln-Peptide	N	MS	Glu	Leu	Ala	Ser	Gln	Pro	Asp	Val	Becker-Pauly et al., 2011
tRNA pseudouridine synthase-like 1	Q8N0Z8	69-82	Val-His-Ala-Leu72+Ser-Peptide	N	MS	Val	His	Ala	Leu	Ser	Asn	Ala	Ala	Becker-Pauly et al., 2011
tRNA-splicing ligase RtcB homolog	Q9Y3I0	140-158	Lys-Glu-Gln-Leu143+Ala-Peptide	N	MS	Lys	Glu	Gln	Leu	Ala	Gln	Ala	Met	Becker-Pauly et al., 2011
Tubulin alpha-3C/D chain	Q13748	43-60	Gly-Gly-Gly-Asp46+Asp-Peptide	N	MS	Gly	Gly	Gly	Asp	Asp	Ser	Phe	Asn	Becker-Pauly et al., 2011
Tubulin alpha-4A chain	P68366	267-280	Phe-Pro-Leu-Ala270+Thr-Peptide	N	MS	Phe	Pro	Leu	Ala	Thr	Tyr	Ala	Pro	Becker-Pauly et al., 2011
Tubulin alpha-4A chain	P68366	290-304	Glu-IIe-Thr-Asn293+Ala-Peptide	N	MS	Glu	Ile	Thr	Asn	Ala	Cys	Phe	Glu	Becker-Pauly et al., 2011
Tubulin alpha-4A chain	P68366	283-304	His-Glu-Gln-Leu286+Ser-Peptide	N	MS	His	Glu	Gln	Leu	Ser	Val	Ala	Glu	Becker-Pauly et al., 2011
Tubulin alpha-4A chain	P68366	280-304	Lys-Ala-Tyr-His283+Glu-Peptide	N	MS	Lys	Ala	Tyr	His	Glu	Gln	Leu	Ser	Becker-Pauly et al., 2011
Tubulin beta chain	P07437	104-122	Gly-His-Tyr-Thr107+Glu-Peptide	N	MS	Gly	His	Tyr	Thr	Glu	Gly	Ala	Glu	Becker-Pauly et al., 2011
Tubulin beta chain	P07437	105-122	His-Tyr-Thr-Glu108+Gly-Peptide	N	MS	His	Tyr	Thr	Glu	Gly	Ala	Glu	Leu	Becker-Pauly et al., 2011
Tubulin beta chain	P07437	103-122	Lys-Gly-His-Tyr106+Thr-Peptide	N	MS	Lys	Gly	His	Tyr	Thr	Glu	Gly	Ala	Becker-Pauly et al., 2011
Tubulin beta-8 chain B	A6NNZ2	130-154	Leu-Gln-Gly-Phe133+Gln-Peptide	N	MS	Leu	Gln	Gly	Phe	Gln	Leu	Thr	His	Becker-Pauly et al., 2011
Tubulin beta-8 chain B	A6NNZ2	124-154	Ala-Glu-Ser-Cys127+Asp-Peptide	N	MS	Ala	Glu	Ser	Cys	Asp	Cys	Leu	Gln	Becker-Pauly et al., 2011
Tumor necrosis factor alpha-induced protein 2	Q03169	99-117	Ala-Leu-Glu-Arg102+Glu-Peptide	N	MS	Ala	Leu	Glu	Arg	Glu	Leu	Ala	Ala	Becker-Pauly et al., 2011
Tyrosyl-tRNA synthetase, cytoplasmic	P54577	291-310	Ala-Tyr-Val-Asp294+Leu-Peptide	N	MS	Ala	Tyr	Val	Asp	Leu	Glu	Lys	Asp	Becker-Pauly et al., 2011
U1 small nuclear ribonucleoprotein A	P09012	135-152	Gly-Ala-Val-Gln138+Gly-Peptide	N	MS	Gly	Ala	Val	Gln	Gly	Pro	Val	Pro	Becker-Pauly et al., 2011
U5 small nuclear ribonucleoprotein 200 kDa helicase	O75643	1730-1743	His-Cys-Met-His1733+Asp-Peptide	N	MS	His	Cys	Met	His	Asp	His	Phe	Asn	Becker-Pauly et al., 2011
Ubiquitin carboxyl-terminal hydrolase isozyme L1	P09936	138-153	Ala-Ile-Gln-Ala141+Ala-Peptide	N	MS	Ala	Ile	Gln	Ala	Ala	His	Asp	Ala	Becker-Pauly et al., 2011
Ubiquitin carboxyl-terminal hydrolase isozyme L1	P09936	140-153	Gln-Ala-Ala-His143+Asp-Peptide	N	MS	Gln	Ala	Ala	His	Asp	Ala	Val	Ala	Becker-Pauly et al., 2011
Ubiquitin carboxyl-terminal hydrolase isozyme L1	P09936	100-115	Ala-Asn-Asn-Gln103+Asp-Peptide	N	MS	Ala	Asn	Asn	Gln	Asp	Lys	Leu	Gly	Becker-Pauly et al., 2011
Ubiquitin-like modifier-activating enzyme 1	P22314	815-830	Gln-Ser-Ala-Asn818+Ala-Peptide	N	MS	Gln	Ser	Ala	Asn	Ala	Ser	Val	Asp	Becker-Pauly et al., 2011
Ubiquitin-like modifier-activating enzyme 1	P22314	789-802	Thr-Phe-Leu-Gln792+Ser-Peptide	N	MS	Thr	Phe	Leu	Gln	Ser	Val	Gln	Val	Becker-Pauly et al., 2011
Ubiquitin-like modifier-activating enzyme 1	P22314	308-322	Ala-Ser-Leu-Ala311+Glu-Peptide	N	MS	Ala	Ser	Leu	Ala	Glu	Pro	Asp	Phe	Becker-Pauly et al., 2011
Ubiquitin-like modifier-activating enzyme 1	P22314	856-869	Asn-Phe-His-Met859+Asp-Peptide	N	MS	Asn	Phe	His	Met	Asp	Phe	Ile	Val	Becker-Pauly et al., 2011
Uncharacterized protein C9orf78	Q9NZ63	54-69	Val-Gly-Glu-Lys57+Val-Peptide	N	MS	Val	Gly	Glu	Lys	Val	Gln	Glu	Glu	Becker-Pauly et al., 2011
Uncharacterized protein LP9056	Q9H9K5	548-563	Arg-Ala-Met-Lys551+Gly-Peptide	N	MS	Arg	Ala	Met	Lys	Gly	Leu	Thr	Thr	Becker-Pauly et al., 2011
Uroporphyrinogen decarboxylase	P06132	342-359	Tyr-Pro-Asp-Met345+Asp-Peptide	N	MS	Tyr	Pro	Asp	Met	Asp	Pro	Glu	His	Becker-Pauly et al., 2011
Vimentin	P08670	425-440	Glu-Thr-Asn-Leu428+Asp-Peptide	N	MS	Glu	Thr	Asn	Leu	Asp	Ser	Leu	Pro	Becker-Pauly et al., 2011
Vimentin	P08670	364-378	Arg-Leu-Gln-Asp367+Glu-Peptide	N	MS	Arg	Leu	Gln	Asp	Glu	Ile	Gln	Asn	Becker-Pauly et al., 2011
Vimentin	P08670	326-342	Leu-Thr-Cys-Glu329+Val-Peptide	N	MS	Leu	Thr	Cys	Glu	Val	Asp	Ala	Leu	Becker-Pauly et al., 2011
Voltage-dependent anion-selective channel protein 3	Q9Y277	182-197	Thr-His-Val-Asn185+Asp-Peptide	N	MS	Thr	His	Val	Asn	Asp	Gly	Thr	Glu	Becker-Pauly et al., 2011
X-ray repair cross-complementing protein 5	P13010	552-565	Glu-Ile-Phe-Gln555+Asp-Peptide	N	MS	Glu	Ile	Phe	Gln	Asp	Asn	His	Glu	Becker-Pauly et al., 2011
X-ray repair cross-complementing protein 6	P12956	556-570	Lys-Val-Glu-Tyr559+Ser-Peptide	N	MS	Lys	Val	Glu	Tyr	Ser	Glu	Glu	Glu	Becker-Pauly et al., 2011
X-ray repair cross-complementing protein 6	P12956	231-244	Val-His-Phe-Glu234+Glu-Peptide	N	MS	Val	His	Phe	Glu	Glu	Ser	Ser	Lys	Becker-Pauly et al., 2011
Zinc finger protein 224	Q9NZL3	78-92	Ser-Gly-Asp-Lys81+IIe-Peptide	N	MS	Ser	Gly	Asp	Lys	Ile	Gln	Thr	Glu	Becker-Pauly et al., 2011