Substrates for peptidase A01.009: cathepsin D
Peptide and protein substrates that are thought to be physiologically relevant are indicated by P. Peptide and protein substrates that are thought to be pathologically relevant are indicated by D. Peptide and protein substrates that are not physiologically relevant are indicated by N. Synthetic substrates are indicated by S. Click on the symbol to show only physiological, non-physiological or synthetic substrates, or here to display all substrates. How cleavage sites have been identified are indicated by the following evidence codes: NT = N-terminal sequencing, MS = mass spectroscopy, MU = mutation, CS = consensus sequence, LC = liquid chromatography. To see all annotated cleavages for a protein substrate, click on the UniProt Accession.
| Substrate | Uniprot | Residue range | Cleavage Site | Cleavage type | Evidence | P4 | P3 | P2 | P1 | P1' | P2' | P3' | P4' | Reference | CutDB | MERNUM |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14-3-3 protein beta/alpha | Q9CQV8 | 1-246 | peptide-Leu45+Leu-peptide | P | MS | Glu | Arg | Asn | Leu | Leu | Ser | Val | Ala | Melzer et al., 2012 | ||
| 14-3-3 protein beta/alpha | Q9CQV8 | 1-246 | peptide-Leu46+Ser-peptide | P | MS | Arg | Asn | Leu | Leu | Ser | Val | Ala | Tyr | Melzer et al., 2012 | ||
| 14-3-3 protein eta | P68510 | 2-246 | peptide-Leu33+Asn-peptide | P | MS | Val | Thr | Glu | Leu | Asn | Glu | Pro | Leu | Impens et al., 2010 | ||
| 14-3-3 protein eta | P68510 | 2-246 | peptide-Leu44+Leu-peptide | P | MS | Asp | Arg | Asn | Leu | Leu | Ser | Val | Ala | Melzer et al., 2012 | ||
| 14-3-3 protein eta | P68510 | 2-246 | peptide-Leu45+Ser-peptide | P | MS | Arg | Asn | Leu | Leu | Ser | Val | Ala | Tyr | Melzer et al., 2012 | ||
| 14-3-3 protein eta | P68510 | 2-246 | peptide-Phe122+Tyr-peptide | P | MS | Ser | Lys | Val | Phe | Tyr | Leu | Lys | Met | Melzer et al., 2012 | ||
| 14-3-3 protein gamma | P61982 | 1-247 | peptide-Leu44+Leu-peptide | P | MS | Glu | Arg | Asn | Leu | Leu | Ser | Val | Ala | Impens et al., 2010 | ||
| 14-3-3 protein gamma | P61982 | 1-247 | peptide-Leu45+Ser-peptide | P | MS | Arg | Asn | Leu | Leu | Ser | Val | Ala | Tyr | Melzer et al., 2012 | ||
| 14-3-3 protein gamma | P61982 | 1-247 | peptide-Phe122+Tyr-peptide | P | MS | Ser | Lys | Val | Phe | Tyr | Leu | Lys | Met | Melzer et al., 2012 | ||
| 14-3-3 protein sigma | O70456 | 1-248 | peptide-Leu6+Ile-peptide | P | MS | Arg | Ala | Ser | Leu | Ile | Gln | Lys | Ala | Impens et al., 2010 | ||
| 14-3-3 protein sigma | O70456 | 1-248 | peptide-Phe119+Tyr-peptide | P | MS | Ser | Arg | Val | Phe | Tyr | Leu | Lys | Met | Melzer et al., 2012 | ||
| 14-3-3 protein theta | P68254 | 1-245 | peptide-Met26+Lys-peptide | P | MS | Ala | Thr | Cys | Met | Lys | Ala | Val | Thr | Impens et al., 2010 | ||
| 14-3-3 protein theta | P68254 | 1-245 | peptide-Leu6+Ile-peptide | P | MS | Lys | Thr | Glu | Leu | Ile | Gln | Lys | Ala | Melzer et al., 2012 | ||
| 14-3-3 protein zeta/delta | P63101 | 1-245 | peptide-Met22+Ala-peptide | P | MS | Tyr | Asp | Asp | Met | Ala | Ala | Cys | Met | Impens et al., 2010 | ||
| 14-3-3 protein zeta/delta | P63101 | 1-245 | peptide-Ala23+Ala-peptide | P | MS | Asp | Asp | Met | Ala | Ala | Cys | Met | Lys | Impens et al., 2010 | ||
| 14-3-3 protein zeta/delta | P63101 | 1-245 | peptide-Ala24+Cys-peptide | P | MS | Asp | Met | Ala | Ala | Cys | Met | Lys | Ser | Impens et al., 2010 | ||
| 14-3-3 protein zeta/delta | P63101 | 1-245 | peptide-Met26+Lys-peptide | P | MS | Ala | Ala | Cys | Met | Lys | Ser | Val | Thr | Impens et al., 2010 | ||
| 14-3-3 protein zeta/delta | P63101 | 1-245 | peptide-Leu44+Ser-peptide | P | MS | Arg | Asn | Leu | Leu | Ser | Val | Ala | Tyr | Impens et al., 2010 | ||
| 14-3-3 protein zeta/delta | P63101 | 1-245 | peptide-Phe117+Tyr-peptide | P | MS | Ser | Lys | Val | Phe | Tyr | Leu | Lys | Met | Impens et al., 2010 | ||
| 14-3-3 protein zeta/delta | P63101 | 1-245 | peptide-Leu43+Leu-peptide | P | MS | Glu | Arg | Asn | Leu | Leu | Ser | Val | Ala | Melzer et al., 2012 | ||
| 26S protease regulatory subunit 7 | P46471 | 2-433 | peptide-Leu80+Ala-peptide | P | MS | Leu | Trp | Asp | Leu | Ala | Ala | Asp | Lys | Impens et al., 2010 | ||
| 26S proteasome non-ATPase regulatory subunit 1 | Q3TXS7 | 1-953 | peptide-Leu350+Met-peptide | P | MS | Asn | Thr | Asp | Leu | Met | Ile | Leu | Lys | Impens et al., 2010 | ||
| 26S proteasome non-ATPase regulatory subunit 14 | O35593 | 1-310 | peptide-Leu270+Ala-peptide | P | MS | Pro | Glu | Gln | Leu | Ala | Ile | Lys | Asn | Impens et al., 2010 | ||
| 26S proteasome non-ATPase regulatory subunit 2 | Q8VDM4 | 1-908 | peptide-Phe727+Ala-peptide | P | MS | Asn | Ser | Ile | Phe | Ala | Met | Gly | Met | Impens et al., 2010 | ||
| 26S proteasome non-ATPase regulatory subunit 4 | O35226 | 2-376 | peptide-Leu338+Glu-peptide | P | MS | Gln | Ser | Val | Leu | Glu | Asn | Leu | Pro | Impens et al., 2010 | ||
| 26S proteasome non-ATPase regulatory subunit 8 | Q9CX56 | 1-353 | peptide-Phe295+Phe-peptide | P | MS | Arg | Ile | Leu | Phe | Phe | Ser | Thr | Pro | Melzer et al., 2012 | ||
| 3-mercaptopyruvate sulfurtransferase | Q99J99 | 2-297 | peptide-Phe216+Leu-peptide | P | MS | Phe | Thr | Glu | Phe | Leu | Thr | Asn | Glu | Impens et al., 2010 | ||
| 4-trimethylaminobutyraldehyde dehydrogenase | Q9JLJ2 | 2-494 | peptide-Glu307+Val-peptide | P | MS | Phe | Ile | Asn | Glu | Val | Val | Lys | Gln | Impens et al., 2010 | ||
| 4-trimethylaminobutyraldehyde dehydrogenase | Q9JLJ2 | 2-494 | peptide-Phe6+Val-peptide | P | MS | Thr | Gly | Thr | Phe | Val | Val | Ser | Gln | Impens et al., 2010 | ||
| 40S ribosomal protein S14 | P62264 | 2-151 | peptide-Leu76+Ala-peptide | P | MS | Ala | Ala | Met | Leu | Ala | Ala | Gln | Asp | Impens et al., 2010 | ||
| 40S ribosomal protein S15 | P62843 | 2-145 | peptide-Leu33+Met-peptide | P | MS | Tyr | Glu | Gln | Leu | Met | Gln | Leu | Tyr | Impens et al., 2010 | ||
| 40S ribosomal protein S17 | P63276 | 2-135 | peptide-Glu37+Ile-peptide | P | MS | Val | Cys | Glu | Glu | Ile | Ala | Ile | Ile | Impens et al., 2010 | ||
| 40S ribosomal protein S17 | P63276 | 2-135 | peptide-Leu117+Gln-peptide | P | MS | Leu | Ser | Asn | Leu | Gln | Val | Thr | Gln | Impens et al., 2010 | ||
| 40S ribosomal protein S19 | Q9CZX8 | 2-145 | peptide-Leu110+Lys-peptide | P | MS | Leu | Glu | Gly | Leu | Lys | Met | Val | Glu | Impens et al., 2010 | ||
| 40S ribosomal protein S19 | Q9CZX8 | 2-145 | peptide-Lys111+Met-peptide | P | MS | Glu | Gly | Leu | Lys | Met | Val | Glu | Lys | Impens et al., 2010 | ||
| 40S ribosomal protein S3a | P97351 | 2-264 | peptide-Leu71+Ala-peptide | P | MS | Glu | Val | Ser | Leu | Ala | Asp | Leu | Gln | Impens et al., 2010 | ||
| 40S ribosomal protein S3a | P97351 | 2-264 | peptide-Leu137+Phe-peptide | P | MS | Leu | Leu | Arg | Leu | Phe | Cys | Val | Gly | Impens et al., 2010 | ||
| 40S ribosomal protein S4, X isoform | P62702 | 2-263 | peptide-Cys181+Met-peptide | P | MS | Gly | Asn | Leu | Cys | Met | Val | Thr | Gly | Impens et al., 2010 | ||
| 40S ribosomal protein S5 | P97461 | 1-204 | peptide-Leu177+Ile-peptide | P | MS | Ala | Asp | Glu | Leu | Ile | Asn | Ala | Ala | Impens et al., 2010 | ||
| 40S ribosomal protein S5 | P97461 | 1-204 | peptide-Leu112+Val-peptide | P | MS | Leu | Gln | Val | Leu | Val | Asn | Ala | Ile | Impens et al., 2010 | ||
| 40S ribosomal protein S6 | P62754 | 1-249 | peptide-Leu111+Val-peptide | P | MS | Val | Leu | Asn | Leu | Val | Ile | Val | Lys | Impens et al., 2010 | ||
| 40S ribosomal protein S7 | P62082 | 1-194 | peptide-Leu30+Glu-peptide | P | MS | Leu | Leu | Glu | Leu | Glu | Met | Asn | Ser | Impens et al., 2010 | ||
| 40S ribosomal protein S7 | P62082 | 1-194 | peptide-Asp132+Leu-peptide | P | MS | Ile | Leu | Glu | Asp | Leu | Val | Phe | Pro | Impens et al., 2010 | ||
| 40S ribosomal protein S7 | P62082 | 1-194 | peptide-Leu133+Val-peptide | P | MS | Leu | Glu | Asp | Leu | Val | Phe | Pro | Ser | Impens et al., 2010 | ||
| 6-phosphogluconate dehydrogenase, decarboxylating | Q9DCD0 | 2-483 | peptide-Leu280+Ile-peptide | P | MS | Pro | Val | Thr | Leu | Ile | Gly | Glu | Ala | Impens et al., 2010 | ||
| 6-phosphogluconate dehydrogenase, decarboxylating | Q9DCD0 | 2-483 | peptide-Asp96+Ile-peptide | P | MS | Asp | Thr | Gly | Asp | Ile | Ile | Ile | Asp | Impens et al., 2010 | ||
| 6-phosphogluconolactonase | Q9CQ60 | 2-257 | peptide-Phe201+Val-peptide | P | MS | Ser | Ile | Ile | Phe | Val | Ala | Thr | Gly | Impens et al., 2010 | ||
| 60 kDa heat shock protein, mitochondrial | P63038 | 27-573 | peptide-Leu47+Ala-peptide | P | MS | Val | Asp | Leu | Leu | Ala | Asp | Ala | Val | Impens et al., 2010 | ||
| 60 kDa heat shock protein, mitochondrial | P63038 | 27-573 | peptide-Leu404+Lys-peptide | P | MS | Val | Ala | Val | Leu | Lys | Val | Gly | Gly | Impens et al., 2010 | ||
| 60 kDa heat shock protein, mitochondrial | P63038 | 27-573 | peptide-Met513+Val-peptide | P | MS | Phe | Val | Asn | Met | Val | Glu | Lys | Gly | Impens et al., 2010 | ||
| 60S acidic ribosomal protein P0 | P14869 | 1-317 | peptide-Phe28+Ile-peptide | P | MS | Pro | Lys | Cys | Phe | Ile | Val | Gly | Ala | Impens et al., 2010 | ||
| 60S acidic ribosomal protein P2 | P99027 | 1-115 | peptide-Leu9+Ala-peptide | P | MS | Ser | Tyr | Leu | Leu | Ala | Ala | Leu | Gly | Impens et al., 2010 | ||
| 60S ribosomal protein L10a | P53026 | 2-217 | peptide-Phe110+Leu-peptide | P | MS | Tyr | Asp | Ala | Phe | Leu | Ala | Ser | Glu | Impens et al., 2010 | ||
| 60S ribosomal protein L10a | P53026 | 2-217 | peptide-Leu34+Gln-peptide | P | MS | Thr | Val | Glu | Leu | Gln | Ile | Ser | Leu | Impens et al., 2010 | ||
| 60S ribosomal protein L11 | Q9CXW4 | 2-178 | peptide-Leu40+Glu-peptide | P | MS | Ala | Lys | Val | Leu | Glu | Gln | Leu | Thr | Impens et al., 2010 | ||
| 60S ribosomal protein L11 | Q9CXW4 | 2-178 | peptide-Leu22+Asn-peptide | P | MS | Lys | Leu | Cys | Leu | Asn | Ile | Cys | Val | Impens et al., 2010 | ||
| 60S ribosomal protein L12 | P35979 | 1-165 | peptide-Phe106+Asp-peptide | P | MS | Asn | Ile | Thr | Phe | Asp | Glu | Ile | Val | Impens et al., 2010 | ||
| 60S ribosomal protein L19 | P84099 | 1-196 | peptide-Tyr124+Leu-peptide | P | MS | His | Ser | Leu | Tyr | Leu | Lys | Val | Lys | Impens et al., 2010 | ||
| 60S ribosomal protein L23 | P62830 | 1-140 | peptide-Met62+Ala-peptide | P | MS | Asp | Met | Val | Met | Ala | Thr | Val | Lys | Impens et al., 2010 | ||
| 60S ribosomal protein L3 | P27659 | 2-403 | peptide-Leu333+Lys-peptide | P | MS | Phe | Ile | Met | Leu | Lys | Gly | Cys | Val | Impens et al., 2010 | ||
| 60S ribosomal protein L30 | P62889 | 2-115 | peptide-Leu94+Ala-peptide | P | MS | Val | Cys | Thr | Leu | Ala | Ile | Ile | Asp | Impens et al., 2010 | ||
| 60S ribosomal protein L30 | P62889 | 2-115 | peptide-Ala95+Ile-peptide | P | MS | Cys | Thr | Leu | Ala | Ile | Ile | Asp | Pro | Impens et al., 2010 | ||
| 60S ribosomal protein L35 | Q6ZWV7 | 2-123 | peptide-Leu58+Thr-peptide | P | MS | Ala | Arg | Val | Leu | Thr | Val | Ile | Asn | Impens et al., 2010 | ||
| 60S ribosomal protein L6 | P47911 | 2-296 | peptide-Leu180+Leu-peptide | P | MS | Asp | Ser | Gly | Leu | Leu | Leu | Val | Thr | Impens et al., 2010 | ||
| 60S ribosomal protein L6 | P47911 | 2-296 | peptide-Leu181+Leu-peptide | P | MS | Ser | Gly | Leu | Leu | Leu | Val | Thr | Gly | Impens et al., 2010 | ||
| 60S ribosomal protein L7 | P14148 | 1-270 | peptide-Met209+Glu-peptide | P | MS | Ile | Ile | Cys | Met | Glu | Asp | Leu | Ile | Impens et al., 2010 | ||
| 60S ribosomal protein L7a | P12970 | 2-266 | peptide-Leu166+Val-peptide | P | MS | Pro | Ile | Glu | Leu | Val | Val | Phe | Leu | Impens et al., 2010 | ||
| 60S ribosomal protein L9 | P51410 | 1-192 | peptide-Leu45+Ser-peptide | P | MS | Asn | Val | Glu | Leu | Ser | Leu | Leu | Gly | Impens et al., 2010 | ||
| 60S ribosomal protein L9 | P51410 | 1-192 | peptide-Leu153+Val-peptide | P | MS | Asp | Ile | Glu | Leu | Val | Ser | Asn | Ser | Impens et al., 2010 | ||
| Abz-Ile-Glu-Phe-Nph-Arg-Leu-NH2 | Abz-Ile-Glu-Phe+Nph-Arg-Leu-NH2 | S | Abz | Ile | Glu | Phe | Nph | Arg | Leu | NH2 | Brindley et al., 2001 | |||||
| Ac-Orn-Gly-Gly-Val-Val-Ile-Ala-Thr-Val-Ile-Orn-NH2 | Ac-Orn-Gly-Gly-Val-Val-Ile-Ala+Thr-Val-Ile-Orn-NH2 | S | Val | Val | Ile | Ala | Thr | Val | Ile | Orn | Higaki et al., 1996 | |||||
| Aconitate hydratase, mitochondrial | Q99KI0 | 28-780 | peptide-Leu47+Leu-peptide | P | MS | Arg | Tyr | Asp | Leu | Leu | Glu | Lys | Asn | Impens et al., 2010 | ||
| Actin, alpha cardiac muscle 1 | P68033 | 3-377 | peptide-Leu106+Leu-peptide | P | MS | His | Pro | Thr | Leu | Leu | Thr | Glu | Ala | Melzer et al., 2012 | ||
| Actin, alpha cardiac muscle 1 | P68033 | 3-377 | peptide-Met229+Ala-peptide | P | MS | Glu | Asn | Glu | Met | Ala | Thr | Ala | Ala | Melzer et al., 2012 | ||
| Actin, alpha cardiac muscle 1 | P68033 | 3-377 | peptide-Leu301+Ser-peptide | P | MS | Asn | Asn | Val | Leu | Ser | Gly | Gly | Thr | Melzer et al., 2012 | ||
| Actin, alpha skeletal muscle | P68134 | 3-377 | peptide-Leu106+Leu-peptide | P | MS | His | Pro | Thr | Leu | Leu | Thr | Glu | Ala | Melzer et al., 2012 | ||
| Actin, alpha skeletal muscle | P68134 | 3-377 | peptide-Met229+Ala-peptide | P | MS | Glu | Asn | Glu | Met | Ala | Thr | Ala | Ala | Melzer et al., 2012 | ||
| Actin, alpha skeletal muscle | P68134 | 3-377 | peptide-Met301+Ser-peptide | P | MS | Asn | Asn | Val | Met | Ser | Gly | Gly | Thr | Melzer et al., 2012 | ||
| Actin, aortic smooth muscle | P62737 | 3-377 | peptide-Leu106+Leu-peptide | P | MS | His | Pro | Thr | Leu | Leu | Thr | Glu | Ala | Melzer et al., 2012 | ||
| Actin, aortic smooth muscle | P62737 | 3-377 | peptide-Met229+Ala-peptide | P | MS | Glu | Asn | Glu | Met | Ala | Thr | Ala | Ala | Melzer et al., 2012 | ||
| Actin, aortic smooth muscle | P62737 | 3-377 | peptide-Leu301+Ser-peptide | P | MS | Asn | Asn | Val | Leu | Ser | Gly | Gly | Thr | Melzer et al., 2012 | ||
| Actin, cytoplasmic 1 | P60710 | 1-375 | peptide-Met227+Ala-peptide | P | MS | Glu | Gln | Glu | Met | Ala | Thr | Ala | Ala | Impens et al., 2010 | ||
| Actin, cytoplasmic 1 | P60710 | 1-375 | peptide-Trp356+Ile-peptide | P | MS | Gln | Gln | Met | Trp | Ile | Ser | Lys | Gln | Impens et al., 2010 | ||
| Actin, cytoplasmic 1 | P60710 | 1-375 | peptide-Ala7+Leu-peptide | P | MS | Asp | Ile | Ala | Ala | Leu | Val | Val | Asp | Impens et al., 2010 | ||
| Actin, cytoplasmic 1 | P60710 | 1-375 | peptide-Gly268+Met-peptide | P | MS | Ser | Phe | Leu | Gly | Met | Glu | Ser | Cys | Impens et al., 2010 | ||
| Actin, cytoplasmic 1 | P60710 | 1-375 | peptide-Phe279+Asn-peptide | P | MS | Glu | Thr | Thr | Phe | Asn | Ser | Ile | Met | Impens et al., 2010 | ||
| Actin, cytoplasmic 1 | P60710 | 1-375 | peptide-Leu299+Ser-peptide | P | MS | Asn | Thr | Val | Leu | Ser | Gly | Gly | Thr | Impens et al., 2010 | ||
| Actin, cytoplasmic 1 | P60710 | 1-375 | peptide-Leu8+Val-peptide | P | MS | Ile | Ala | Ala | Leu | Val | Val | Asp | Asn | Impens et al., 2010 | ||
| Actin, cytoplasmic 1 | P60710 | 1-375 | peptide-Leu293+Tyr-peptide | P | MS | Arg | Lys | Asp | Leu | Tyr | Ala | Asn | Thr | Impens et al., 2010 | ||
| Actin, cytoplasmic 1 | P60710 | 1-375 | peptide-Leu104+Leu-peptide | P | MS | His | Pro | Val | Leu | Leu | Thr | Glu | Ala | Melzer et al., 2012 | ||
| Actin, cytoplasmic 2 | P63260 | 1-375 | peptide-Leu104+Leu-peptide | P | MS | His | Pro | Val | Leu | Leu | Thr | Glu | Ala | Impens et al., 2010 | ||
| Actin, cytoplasmic 2 | P63260 | 1-375 | peptide-Ala7+Leu-peptide | P | MS | Glu | Ile | Ala | Ala | Leu | Val | Ile | Asp | Impens et al., 2010 | ||
| Actin, cytoplasmic 2 | P63260 | 1-375 | peptide-Leu8+Val-peptide | P | MS | Ile | Ala | Ala | Leu | Val | Ile | Asp | Asn | Impens et al., 2010 | ||
| Actin, cytoplasmic 2 | P63260 | 1-375 | peptide-Met227+Ala-peptide | P | MS | Glu | Gln | Glu | Met | Ala | Thr | Ala | Ala | Melzer et al., 2012 | ||
| Actin, cytoplasmic 2 | P63260 | 1-375 | peptide-Gly268+Met-peptide | P | MS | Ser | Phe | Leu | Gly | Met | Glu | Ser | Cys | Melzer et al., 2012 | ||
| Actin, cytoplasmic 2 | P63260 | 1-375 | peptide-Phe279+Asn-peptide | P | MS | Glu | Thr | Thr | Phe | Asn | Ser | Ile | Met | Melzer et al., 2012 | ||
| Actin, cytoplasmic 2 | P63260 | 1-375 | peptide-Leu293+Tyr-peptide | P | MS | Arg | Lys | Asp | Leu | Tyr | Ala | Asn | Thr | Melzer et al., 2012 | ||
| Actin, cytoplasmic 2 | P63260 | 1-375 | peptide-Leu299+Ser-peptide | P | MS | Asn | Thr | Val | Leu | Ser | Gly | Gly | Thr | Melzer et al., 2012 | ||
| Actin, cytoplasmic 2 | P63260 | 1-375 | peptide-Trp356+Ile-peptide | P | MS | Gln | Gln | Met | Trp | Ile | Ser | Lys | Gln | Melzer et al., 2012 | ||
| Actin, gamma-enteric smooth muscle | P63268 | 3-376 | peptide-Leu105+Leu-peptide | P | MS | His | Pro | Thr | Leu | Leu | Thr | Glu | Ala | Melzer et al., 2012 | ||
| Actin, gamma-enteric smooth muscle | P63268 | 3-376 | peptide-Met228+Ala-peptide | P | MS | Glu | Asn | Glu | Met | Ala | Thr | Ala | Ala | Melzer et al., 2012 | ||
| Actin, gamma-enteric smooth muscle | P63268 | 3-376 | peptide-Leu300+Ser-peptide | P | MS | Asn | Asn | Val | Leu | Ser | Gly | Gly | Thr | Melzer et al., 2012 | ||
| Actin-related protein 2 | P61161 | 1-394 | peptide-Leu55+Met-peptide | P | MS | Ile | Lys | Asp | Leu | Met | Val | Gly | Asp | Impens et al., 2010 | ||
| Actin-related protein 2/3 complex subunit 4 | P59999 | 2-168 | peptide-Leu22+Glu-peptide | P | MS | Ala | Leu | Cys | Leu | Glu | Asn | Phe | Ser | Impens et al., 2010 | ||
| Actin-related protein 2/3 complex subunit 4 | P59999 | 2-168 | peptide-Ala19+Leu-peptide | P | MS | Leu | Gln | Ala | Ala | Leu | Cys | Leu | Glu | Impens et al., 2010 | ||
| Actin-related protein 2/3 complex subunit 5-like protein | Q9D898 | 2-153 | peptide-Glu17+Phe-peptide | P | MS | Asp | Ile | Asp | Glu | Phe | Asp | Glu | Asn | Impens et al., 2010 | ||
| Actin-related protein 2/3 complex subunit 5-like protein | Q9D898 | 2-153 | peptide-Phe88+Lys-peptide | P | MS | Leu | Thr | Asn | Phe | Lys | Ser | Ser | Glu | Impens et al., 2010 | ||
| Actin-related protein 3 | Q99JY9 | 2-418 | peptide-Leu221+Glu-peptide | P | MS | Glu | Gln | Ser | Leu | Glu | Thr | Ala | Lys | Impens et al., 2010 | ||
| Actin-related protein 3 | Q99JY9 | 2-418 | peptide-Asp301+Glu-peptide | P | MS | Glu | Val | Val | Asp | Glu | Val | Ile | Gln | Impens et al., 2010 | ||
| Actin-related protein 3 | Q99JY9 | 2-418 | peptide-Cys34+Ile-peptide | P | MS | Ile | Pro | Ser | Cys | Ile | Ala | Ile | Lys | Impens et al., 2010 | ||
| Actin-related protein 3 | Q99JY9 | 2-418 | peptide-Ala36+Ile-peptide | P | MS | Ser | Cys | Ile | Ala | Ile | Lys | Glu | Ser | Impens et al., 2010 | ||
| Actin-related protein 3 | Q99JY9 | 2-418 | peptide-Phe390+Tyr-peptide | P | MS | Thr | Pro | Glu | Phe | Tyr | Gln | Val | Cys | Impens et al., 2010 | ||
| Alcohol dehydrogenase [NADP+] | Q9JII6 | 2-325 | peptide-Leu228+Leu-peptide | P | MS | Glu | Pro | Val | Leu | Leu | Glu | Glu | Pro | Impens et al., 2010 | ||
| Aldehyde dehydrogenase, mitochondrial | P47738 | 20-519 | peptide-Gln69+Val-peptide | P | MS | Val | Ile | Cys | Gln | Val | Ala | Glu | Gly | Impens et al., 2010 | ||
| alpha-1-antichymotrypsin | P01011 | 24-423 | peptide-Leu383+Ser-peptide | P | Ile | Thr | Leu | Leu | Ser | Ala | Leu | Val | Pimenta et al., 2000 | |||
| alpha-1-antichymotrypsin | P01011 | 24-423 | peptide-Ala385+Leu-peptide | P | Leu | Leu | Ser | Ala | Leu | Val | Glu | Thr | Pimenta et al., 2000 | |||
| alpha-1-antichymotrypsin | P01011 | 24-423 | peptide-Leu386+Val-peptide | P | Leu | Ser | Ala | Leu | Val | Glu | Thr | Arg | Pimenta et al., 2000 | |||
| Alpha-actinin-1 | Q7TPR4 | 1-892 | peptide-Phe338+Asn-peptide | P | MS | Glu | Ile | Asn | Phe | Asn | Thr | Leu | Gln | Melzer et al., 2012 | ||
| Alpha-actinin-2 | Q9JI91 | 1-894 | peptide-Phe345+Asn-peptide | P | MS | Glu | Ile | Asn | Phe | Asn | Thr | Leu | Gln | Melzer et al., 2012 | ||
| Alpha-actinin-3 | O88990 | 1-900 | peptide-Phe351+Asn-peptide | P | MS | Glu | Ile | Asn | Phe | Asn | Thr | Leu | Gln | Impens et al., 2010 | ||
| Alpha-actinin-4 | P57780 | 1-912 | peptide-Phe358+Asn-peptide | P | MS | Glu | Ile | Asn | Phe | Asn | Thr | Leu | Gln | Melzer et al., 2012 | ||
| Alpha-enolase | P17182 | 2-434 | peptide-Leu116+Ala-peptide | P | MS | Gly | Val | Ser | Leu | Ala | Val | Cys | Lys | Impens et al., 2010 | ||
| Alpha-enolase | P17182 | 2-434 | peptide-Leu388+Cys-peptide | P | MS | Val | Val | Gly | Leu | Cys | Thr | Gly | Gln | Impens et al., 2010 | ||
| Alpha-enolase | P17182 | 2-434 | peptide-Met244+Asp-peptide | P | MS | Val | Ile | Gly | Met | Asp | Val | Ala | Ala | Impens et al., 2010 | ||
| Alpha-enolase | P17182 | 2-434 | peptide-Glu414+Glu-peptide | P | MS | Leu | Arg | Ile | Glu | Glu | Glu | Leu | Gly | Impens et al., 2010 | ||
| Alpha-enolase | P17182 | 2-434 | peptide-Gly312+Ile-peptide | P | MS | Ala | Ser | Ala | Gly | Ile | Gln | Val | Val | Impens et al., 2010 | ||
| Alpha-enolase | P17182 | 2-434 | peptide-Ser115+Leu-peptide | P | MS | Leu | Gly | Val | Ser | Leu | Ala | Val | Cys | Impens et al., 2010 | ||
| Alpha-enolase | P17182 | 2-434 | peptide-Gly387+Leu-peptide | P | MS | Leu | Val | Val | Gly | Leu | Cys | Thr | Gly | Impens et al., 2010 | ||
| Alpha-enolase | P17182 | 2-434 | peptide-Asp383+Leu-peptide | P | MS | Phe | Ile | Ala | Asp | Leu | Val | Val | Gly | Impens et al., 2010 | ||
| Alpha-enolase | P17182 | 2-434 | peptide-Asp23+Leu-peptide | P | MS | Val | Glu | Val | Asp | Leu | Tyr | Thr | Ala | Impens et al., 2010 | ||
| Alpha-enolase | P17182 | 2-434 | peptide-Gly243+Met-peptide | P | MS | Val | Val | Ile | Gly | Met | Asp | Val | Ala | Impens et al., 2010 | ||
| Alpha-enolase | P17182 | 2-434 | peptide-Phe168+Met-peptide | P | MS | Met | Gln | Glu | Phe | Met | Ile | Leu | Pro | Impens et al., 2010 | ||
| Alpha-enolase | P17182 | 2-434 | peptide-Phe307+Thr-peptide | P | MS | Trp | Gln | Lys | Phe | Thr | Ala | Ser | Ala | Impens et al., 2010 | ||
| Alpha-enolase | P17182 | 2-434 | peptide-Leu384+Val-peptide | P | MS | Ile | Ala | Asp | Leu | Val | Val | Gly | Leu | Impens et al., 2010 | ||
| Alpha-enolase | P17182 | 2-434 | peptide-Leu24+Tyr-peptide | P | MS | Glu | Val | Asp | Leu | Tyr | Thr | Ala | Lys | Impens et al., 2010 | ||
| Alpha-N-acetylgalactosaminidase | Q9QWR8 | 18-415 | peptide-Met302+Ile-peptide | P | MS | Asn | Pro | Leu | Met | Ile | Lys | Ile | Asn | Impens et al., 2010 | ||
| alpha-synuclein | P37840 | 1-140 | peptide-Glu123+Ala-peptide | P | NT | Pro | Asp | Asn | Glu | Ala | Tyr | Glu | Met | Sevlever et al., 2008 | ||
| amyloid beta A4 protein | P05067 | 18-770 | peptide-Phe691+Ala-peptide | N | Leu | Val | Phe | Phe | Ala | Glu | Asp | Val | Sadik et al., 1999 | 3139 | ||
| amyloid beta A4 protein | P05067 | 18-770 | peptide-Phe690+Phe-peptide | N | Lys | Leu | Val | Phe | Phe | Ala | Glu | Asp | Sadik et al., 1999 | 3135 | ||
| amyloid beta A4 protein | P05067 | 18-770 | peptide-Phe764+Phe-peptide | N | Thr | Tyr | Lys | Phe | Phe | Glu | Gln | Met | Sadik et al., 1999 | 3136 | ||
| amyloid beta A4 protein | P05067 | 18-770 | peptide-Leu705+Met-peptide | P | Ile | Ile | Gly | Leu | Met | Val | Gly | Gly | Sadik et al., 1999 | 3132 | ||
| amyloid beta A4 protein | P05067 | 18-770 | peptide-Thr719+Leu-peptide | P | Ile | Val | Ile | Thr | Leu | Val | Met | Leu | Sadik et al., 1999 | 3133 | ||
| amyloid beta A4 protein | P05067 | 18-770 | peptide-Leu720+Val-peptide | P | Val | Ile | Thr | Leu | Val | Met | Leu | Lys | Sadik et al., 1999 | 3134 | ||
| amyloid beta A4 protein | P05067 | 18-770 | peptide-Ala713+Thr-peptide | P | Val | Val | Ile | Ala | Thr | Val | Ile | Val | Sadik et al., 1999 | 3131 | ||
| amyloid beta A4 protein | P05067 | 18-770 | peptide-Thr714+Val-peptide | P | Val | Ile | Ala | Thr | Val | Ile | Val | Ile | Sadik et al., 1999 | 3130 | ||
| amyloid beta A4 protein | P05067 | 18-770 | peptide-Asp739+Ala-peptide | N | NT | Val | Glu | Val | Asp | Ala | Ala | Val | Thr | Higaki et al., 1996 | 25095 | |
| amyloid beta A4 protein | P05067 | 621-770 | peptide-Asp627+Ser-peptide | N | NT | Phe | Gly | Ala | Asp | Ser | Val | Pro | Ala | Higaki et al., 1996 | 25091 | |
| amyloid beta A4 protein | P05067 | 621-770 | peptide-Glu668+Val-peptide | N | NT | Glu | Ile | Ser | Glu | Val | Lys | Met | Asp | Higaki et al., 1996 | 25090 | |
| amyloid beta A4 protein | P05067 | 621-770 | peptide-Glu674+Phe-peptide | N | NT | Met | Asp | Ala | Glu | Phe | Arg | His | Asp | Higaki et al., 1996 | 25087 | |
| amyloid beta A4 protein | P05067 | 671-770 | Met-Asp+Glu-peptide | N | MS | - | Met | Asp | Ala | Glu | Phe | Arg | His | Higaki et al., 1996 | ||
| amyloid beta A4 protein | P05067 | 671-770 | peptide-Phe675+Arg-peptide | N | MS | Asp | Ala | Glu | Phe | Arg | His | Asp | Ser | Higaki et al., 1996 | 25088 | |
| amyloid beta A4 protein | P05067 | 671-770 | peptide-Glu693+Asp-peptide | N | MS | Phe | Phe | Ala | Glu | Asp | Val | Gly | Ser | Higaki et al., 1996 | 25093 | |
| amyloid beta A4 protein | P05067 | 671-770 | peptide-Asp694+Val-peptide | N | MS | Phe | Ala | Glu | Asp | Val | Gly | Ser | Asn | Higaki et al., 1996 | 25094 | |
| amyloid beta A4 protein | P05067 | 671-770 | peptide-Met722+Leu-peptide | N | MS | Thr | Leu | Val | Met | Leu | Lys | Lys | Lys | Higaki et al., 1996 | 25092 | |
| amyloid beta A4 protein | P05067 | 671-770 | peptide-Phe765+Glu-peptide | N | MS | Tyr | Lys | Phe | Phe | Glu | Gln | Met | Gln | Higaki et al., 1996 | 25096 | |
| amyloid beta A4 protein | P05067 | 671-770 | peptide-Gln767+Met-Gln-Asp | N | MS | Phe | Phe | Glu | Gln | Met | Gln | Asn | - | Higaki et al., 1996 | ||
| Amyloid beta A4 protein | P05067 | 671-770 | Peptide-Leu723+Lys-Peptide | N | MS | Leu | Val | Met | Leu | Lys | Lys | Lys | Gln | Mackay et al., 1997 | ||
| Annexin A1 | P10107 | 2-346 | peptide-Leu109+Ala-peptide | P | MS | Glu | Val | Val | Leu | Ala | Met | Leu | Lys | Impens et al., 2010 | ||
| Annexin A1 | P10107 | 2-346 | peptide-Phe277+Phe-peptide | P | MS | Thr | Pro | Ala | Phe | Phe | Ala | Glu | Lys | Impens et al., 2010 | ||
| Annexin A1 | P10107 | 2-346 | peptide-Glu6+Phe-peptide | P | MS | Met | Val | Ser | Glu | Phe | Leu | Lys | Gln | Impens et al., 2010 | ||
| Annexin A1 | P10107 | 2-346 | peptide-Leu180+Leu-peptide | P | MS | Arg | Lys | Ala | Leu | Leu | Ala | Leu | Ala | Impens et al., 2010 | ||
| Annexin A1 | P10107 | 2-346 | peptide-Met111+Leu-peptide | P | MS | Val | Leu | Ala | Met | Leu | Lys | Thr | Pro | Impens et al., 2010 | ||
| Annexin A1 | P10107 | 2-346 | peptide-Leu192+Ser-peptide | P | MS | Cys | Gln | Asp | Leu | Ser | Val | Asn | Gln | Impens et al., 2010 | ||
| Annexin A1 | P10107 | 2-346 | peptide-Leu282+Tyr-peptide | P | MS | Ala | Glu | Lys | Leu | Tyr | Glu | Ala | Met | Impens et al., 2010 | ||
| Annexin A10 | Q9QZ10 | 1-324 | peptide-Leu112+Ile-peptide | P | MS | Glu | Asn | Cys | Leu | Ile | Glu | Ile | Leu | Melzer et al., 2012 | ||
| Annexin A2 | P07356 | 2-339 | peptide-Leu259+Val-peptide | P | MS | Phe | Leu | Asn | Leu | Val | Gln | Cys | Ile | Impens et al., 2010 | ||
| Annexin A2 | P07356 | 2-339 | peptide-Leu274+Tyr-peptide | P | MS | Ala | Asp | Arg | Leu | Tyr | Asp | Ser | Met | Impens et al., 2010 | ||
| Annexin A3 | O35639 | 2-323 | peptide-Leu299+Tyr-peptide | P | MS | Gly | Tyr | Ser | Leu | Tyr | Ser | Ala | Ile | Impens et al., 2010 | ||
| Annexin A4 | P97429 | 2-319 | peptide-Leu109+Ile-peptide | P | MS | Glu | Gly | Cys | Leu | Ile | Glu | Ile | Leu | Impens et al., 2010 | ||
| Annexin A4 | P97429 | 2-319 | peptide-Phe298+Ile-peptide | P | MS | Leu | Tyr | Ser | Phe | Ile | Lys | Gly | Asp | Impens et al., 2010 | ||
| Annexin A4 | P97429 | 2-319 | peptide-Leu236+Leu-peptide | P | MS | Glu | Asp | Ala | Leu | Leu | Ala | Ile | Val | Impens et al., 2010 | ||
| Annexin A4 | P97429 | 2-319 | peptide-Leu170+Met-peptide | P | MS | Asp | Asp | Ala | Leu | Met | Lys | Gln | Asp | Impens et al., 2010 | ||
| Annexin A4 | P97429 | 2-319 | peptide-Leu89+Tyr-peptide | P | MS | Pro | Thr | Val | Leu | Tyr | Asp | Val | Gln | Impens et al., 2010 | ||
| Annexin A4 | P97429 | 2-319 | peptide-Leu254+Tyr-peptide | P | MS | Ala | Glu | Arg | Leu | Tyr | Lys | Ser | Met | Impens et al., 2010 | ||
| Annexin A6 | P14824 | 2-673 | peptide-Leu608+Tyr-peptide | P | MS | Ala | Asp | Lys | Leu | Tyr | Lys | Ser | Met | Impens et al., 2010 | ||
| Annexin A6 | P14824 | 2-673 | peptide-Leu115+Ile-peptide | P | MS | Glu | Lys | Cys | Leu | Ile | Glu | Ile | Leu | Melzer et al., 2012 | ||
| Annexin A8 | O35640 | 1-327 | peptide-Ile116+Ile-peptide | P | MS | Glu | Gly | Val | Ile | Ile | Glu | Ile | Leu | Melzer et al., 2012 | ||
| Apoptosis-associated speck-like protein containing a CARD | Q9EPB4 | 1-193 | peptide-Leu131+Asp-peptide | P | MS | Asp | Gly | Val | Leu | Asp | Ala | Leu | His | Impens et al., 2010 | ||
| Apoptosis-associated speck-like protein containing a CARD | Q9EPB4 | 1-193 | peptide-Leu139+Thr-peptide | P | MS | Gly | Ser | Val | Leu | Thr | Glu | Gly | Gln | Impens et al., 2010 | ||
| Arginase-1 | Q61176 | 1-323 | peptide-Ala54+Phe-peptide | P | MS | Gly | Asp | Leu | Ala | Phe | Val | Asp | Val | Impens et al., 2010 | ||
| Arginase-1 | Q61176 | 1-323 | peptide-Leu40+Lys-peptide | P | MS | Leu | Glu | Lys | Leu | Lys | Glu | Thr | Glu | Impens et al., 2010 | ||
| Arginase-1 | Q61176 | 1-323 | peptide-Phe55+Val-peptide | P | MS | Asp | Leu | Ala | Phe | Val | Asp | Val | Pro | Impens et al., 2010 | ||
| Ataxin-3 | Q9CVD2 | 1-355 | peptide-Leu342+Glu-peptide | P | MS | Thr | Met | Ser | Leu | Glu | Thr | Ala | Lys | Impens et al., 2010 | ||
| ATP-binding cassette sub-family A member 5 | Q8K448 | 1-1642 | peptide-Ser470+Glu-peptide | P | MS | Pro | Val | Ser | Ser | Glu | Phe | Ile | Gly | Impens et al., 2010 | ||
| ATP-citrate synthase | Q91V92 | 1-1091 | peptide-Leu439+Asn-peptide | P | MS | Asn | Phe | Leu | Leu | Asn | Ala | Ser | Gly | Impens et al., 2010 | ||
| ATP-citrate synthase | Q91V92 | 1-1091 | peptide-Leu55+Val-peptide | P | MS | Ser | Gln | Ser | Leu | Val | Val | Lys | Pro | Impens et al., 2010 | ||
| Barrier-to-autointegration factor | O54962 | 1-89 | peptide-Phe49+Leu-peptide | P | MS | Leu | Gly | Gln | Phe | Leu | Val | Leu | Lys | Impens et al., 2010 | ||
| Beta-2-microglobulin | P01887 | 21-119 | peptide-Leu85+Ala-peptide | P | MS | Phe | Tyr | Ile | Leu | Ala | His | Thr | Glu | Impens et al., 2010 | ||
| Beta-actin-like protein 2 | Q8BFZ3 | 1-376 | peptide-Phe280+Asn-peptide | P | MS | Glu | Thr | Thr | Phe | Asn | Ser | Ile | Met | Melzer et al., 2012 | ||
| beta-endorphin | P01189 | 237-267 | peptide-Leu253+Phe-peptide | N | Leu | Val | Thr | Leu | Phe | Lys | Asn | Ala | Kageyama et al., 1995 | 26577 | ||
| Beta-enolase | P21550 | 2-434 | peptide-Gly243+Met-peptide | P | MS | Val | Val | Ile | Gly | Met | Asp | Val | Ala | Melzer et al., 2012 | ||
| Beta-enolase | P21550 | 2-434 | peptide-Met244+Asp-peptide | P | MS | Val | Ile | Gly | Met | Asp | Val | Ala | Ala | Melzer et al., 2012 | ||
| Beta-enolase | P21550 | 2-434 | peptide-Asp383+Leu-peptide | P | MS | Phe | Ile | Ala | Asp | Leu | Val | Val | Gly | Melzer et al., 2012 | ||
| Beta-enolase | P21550 | 2-434 | peptide-Leu384+Val-peptide | P | MS | Ile | Ala | Asp | Leu | Val | Val | Gly | Leu | Melzer et al., 2012 | ||
| Beta-enolase | P21550 | 2-434 | peptide-Gly387+Leu-peptide | P | MS | Leu | Val | Val | Gly | Leu | Cys | Thr | Gly | Melzer et al., 2012 | ||
| Beta-enolase | P21550 | 2-434 | peptide-Leu388+Cys-peptide | P | MS | Val | Val | Gly | Leu | Cys | Thr | Gly | Gln | Melzer et al., 2012 | ||
| Bifunctional aminoacyl-tRNA synthetase | Q8CGC7 | 1-1512 | peptide-Leu521+Asp-peptide | P | MS | Val | Asn | Val | Leu | Asp | Ala | Gln | Glu | Impens et al., 2010 | ||
| Bifunctional purine biosynthesis protein PURH | Q9CWJ9 | 1-592 | peptide-Phe318+Val-peptide | P | MS | Phe | Gly | Asp | Phe | Val | Ala | Leu | Ser | Impens et al., 2010 | ||
| Bifunctional purine biosynthesis protein PURH | Q9CWJ9 | 1-592 | peptide-Leu31+Val-peptide | P | MS | Gly | Leu | Ser | Leu | Val | Ala | Ser | Gly | Impens et al., 2010 | ||
| Biliverdin reductase A | Q9CY64 | 3-295 | peptide-Phe257+Ile-peptide | P | MS | Gln | Asp | Ile | Phe | Ile | Gln | Lys | Leu | Impens et al., 2010 | ||
| BolA-like protein 2 | Q8BGS2 | 1-86 | peptide-Leu38+Val-peptide | P | MS | Phe | Arg | Val | Leu | Val | Val | Ser | Ala | Impens et al., 2010 | ||
| C-1-tetrahydrofolate synthase, cytoplasmic | Q922D8 | 2-935 | peptide-Leu155+Ile-peptide | P | MS | Cys | Leu | Glu | Leu | Ile | Lys | Glu | Ala | Impens et al., 2010 | ||
| Calmodulin | P62204 | 2-149 | peptide-Phe20+Asp-peptide | P | MS | Phe | Ser | Leu | Phe | Asp | Lys | Asp | Gly | Impens et al., 2010 | ||
| Calmodulin | P62204 | 2-149 | peptide-Phe93+Asp-peptide | P | MS | Phe | Arg | Val | Phe | Asp | Lys | Asp | Gly | Impens et al., 2010 | ||
| Calmodulin | P62204 | 2-149 | peptide-Leu19+Phe-peptide | P | MS | Ala | Phe | Ser | Leu | Phe | Asp | Lys | Asp | Impens et al., 2010 | ||
| Calmodulin | P62204 | 2-149 | peptide-Phe17+Ser-peptide | P | MS | Lys | Glu | Ala | Phe | Ser | Leu | Phe | Asp | Impens et al., 2010 | ||
| Calpain small subunit 1 | O88456 | 1-269 | peptide-Ala69+Ile-peptide | P | MS | Val | Ile | Ser | Ala | Ile | Ser | Glu | Ala | Impens et al., 2010 | ||
| Caspase-3 | P70677 | 29-175 | peptide-Phe78+Met-peptide | P | MS | Arg | Glu | Thr | Phe | Met | Gly | Leu | Lys | Impens et al., 2010 | ||
| caspase-8 precursor | Q14790 | 1-479 | peptide-Leu237+Ile-peptide | P | Gly | Tyr | Cys | Leu | Ile | Ile | Asn | Asn | Conus et al., 2008 | 26558 | ||
| cathelicidin antimicrobial peptide | P49913 | 31-170 | peptide-Phe160+Leu-peptide | P | Ile | Lys | Asp | Phe | Leu | Arg | Asn | Leu | Baechle et al., 2006 | 19376 | ||
| cathelicidin antimicrobial peptide | P49913 | 31-170 | peptide-Phe138+Phe-peptide | P | Leu | Gly | Asp | Phe | Phe | Arg | Lys | Ser | Baechle et al., 2006 | 19377 | ||
| cathepsin D precursor | P07339 | 19-412 | peptide-Leu46+Ile-peptide | P | NT | Val | Glu | Asp | Leu | Ile | Ala | Lys | Gly | Wittlin et al., 1999 | ||
| CD2-associated protein | Q9JLQ0 | 1-637 | peptide-Phe220+Lys-peptide | P | MS | Gly | Asp | Ile | Phe | Lys | Glu | Gly | Ser | Impens et al., 2010 | ||
| Charged multivesicular body protein 1a | Q921W0 | 1-196 | peptide-Leu162+Asp-peptide | P | MS | Leu | Glu | Val | Leu | Asp | Gln | Leu | Ser | Impens et al., 2010 | ||
| Charged multivesicular body protein 1a | Q921W0 | 1-196 | peptide-Leu165+Ser-peptide | P | MS | Leu | Asp | Gln | Leu | Ser | Gln | Leu | Pro | Impens et al., 2010 | ||
| Charged multivesicular body protein 2b | Q8BJF9 | 1-213 | peptide-Gly171+Ile-peptide | P | MS | Asp | Glu | Ile | Gly | Ile | Glu | Ile | Ser | Impens et al., 2010 | ||
| Charged multivesicular body protein 4b | Q9D8B3 | 2-224 | peptide-Leu7+Phe-peptide | P | MS | Phe | Gly | Lys | Leu | Phe | Gly | Ala | Gly | Impens et al., 2010 | ||
| Chloride intracellular channel protein 1 | Q9Z1Q5 | 2-241 | peptide-Leu10+Phe-peptide | P | MS | Gln | Val | Glu | Leu | Phe | Val | Lys | Ala | Impens et al., 2010 | ||
| Chloride intracellular channel protein 1 | Q9Z1Q5 | 2-241 | peptide-Phe11+Val-peptide | P | MS | Val | Glu | Leu | Phe | Val | Lys | Ala | Gly | Impens et al., 2010 | ||
| Chloride intracellular channel protein 4 | Q9QYB1 | 2-253 | peptide-Leu21+Phe-peptide | P | MS | Leu | Ile | Glu | Leu | Phe | Val | Lys | Ala | Impens et al., 2010 | ||
| Chromobox protein homolog 3 | P23198 | 1-183 | peptide-Asp75+Phe-peptide | P | MS | Leu | Ile | Glu | Asp | Phe | Leu | Asn | Ser | Impens et al., 2010 | ||
| Clathrin light chain A | O08585 | 1-235 | peptide-Leu204+Cys-peptide | P | MS | Val | Ala | Arg | Leu | Cys | Asp | Phe | Asn | Impens et al., 2010 | ||
| Clathrin light chain A | O08585 | 1-235 | peptide-Cys205+Asp-peptide | P | MS | Ala | Arg | Leu | Cys | Asp | Phe | Asn | Pro | Impens et al., 2010 | ||
| Clathrin light chain A | O08585 | 1-235 | peptide-Asp206+Phe-peptide | P | MS | Arg | Leu | Cys | Asp | Phe | Asn | Pro | Lys | Impens et al., 2010 | ||
| Clathrin light chain A | O08585 | 1-235 | peptide-Leu153+Gln-peptide | P | MS | Asp | Glu | Gln | Leu | Gln | Lys | Thr | Lys | Impens et al., 2010 | ||
| Clathrin light chain A | O08585 | 1-235 | peptide-Tyr82+Tyr-peptide | P | MS | Asn | Gly | Glu | Tyr | Tyr | Gln | Glu | Ser | Impens et al., 2010 | ||
| Clathrin light chain B | Q6IRU5 | 1-229 | peptide-Cys199+Asp-peptide | P | MS | Ala | Gln | Leu | Cys | Asp | Phe | Asn | Pro | Impens et al., 2010 | ||
| Cofilin-1 | P18760 | 2-166 | peptide-Thr70+Phe-peptide | P | MS | Pro | Tyr | Thr | Thr | Phe | Val | Lys | Met | Impens et al., 2010 | ||
| Cofilin-1 | P18760 | 2-166 | peptide-Leu56+Val-peptide | P | MS | Lys | Glu | Ile | Leu | Val | Gly | Asp | Val | Impens et al., 2010 | ||
| Cofilin-1 | P18760 | 2-166 | peptide-Phe71+Val-peptide | P | MS | Tyr | Thr | Thr | Phe | Val | Lys | Met | Leu | Impens et al., 2010 | ||
| Coiled-coil domain-containing protein 50 | Q810U5 | 2-305 | peptide-Met210+Ala-peptide | P | MS | Arg | Leu | Leu | Met | Ala | Glu | Glu | Lys | Impens et al., 2010 | ||
| Cold-inducible RNA-binding protein | P60824 | 1-172 | peptide-Glu34+Val-peptide | P | MS | Gln | Ile | Ser | Glu | Val | Val | Val | Val | Melzer et al., 2012 | ||
| collagen alpha 1(I) chain | P02453 | 162-1215 | peptide-Leu+Ser-peptide | P | Gly | Tyr | Asp | Leu | Ser | Phe | Leu | Pro | Scott & Pearson, 1981 | |||
| collagen alpha 2(I) chain | P02465 | 80-1100 | peptide-Phe782+Leu-peptide | P | Ala | Pro | Gly | Phe | Leu | Gly | Leu | Pro | Scott & Pearson, 1981 | |||
| collagen alpha-3(IV) chain | Q01955 | 29-1670 | peptide-Leu1474+Phe-peptide | P | MS | Phe | Ser | Phe | Leu | Phe | Val | Gln | Gly | Zou et al., 2007 | 26779 | |
| collagen alpha-3(IV) chain | Q01955 | 29-1670 | peptide-Phe1583+Ile-peptide | P | MS | Gly | Phe | Ser | Phe | Ile | Met | Phe | Thr | Zou et al., 2007 | 26780 | |
| collagen alpha-3(IV) chain | Q01955 | 29-1670 | peptide-Cys1505+Asn-peptide | P | MS | Phe | Leu | Phe | Cys | Asn | Val | Asn | Asp | Zou et al., 2007 | 26781 | |
| collagen alpha-3(IV) chain | Q01955 | 29-1670 | peptide-Trp1632+Leu-peptide | P | MS | Tyr | Ser | Phe | Trp | Leu | Ala | Ser | Leu | Zou et al., 2007 | 26782 | |
| Collagen alpha-3(IV) chain | Q01955 | 1445-1669 | peptide-Leu1577+Trp-peptide | N | NT | Trp | Ile | Ser | Leu | Trp | Lys | Gly | Phe | Zou et al., 2007 | ||
| Collagen alpha-3(IV) chain | Q01955 | 1445-1669 | peptide-Met1641+Phe-peptide | N | NT | Pro | Glu | Arg | Met | Phe | Arg | Lys | Pro | Zou et al., 2007 | ||
| COMM domain-containing protein 9 | Q8K2Q0 | 1-198 | peptide-Leu12+Gln-peptide | P | MS | Phe | Val | Ala | Leu | Gln | Ser | Leu | Leu | Impens et al., 2010 | ||
| COP9 signalosome complex subunit 5 | O35864 | 2-334 | peptide-Leu269+Ser-peptide | P | MS | Val | Phe | Asp | Leu | Ser | Glu | Lys | Leu | Impens et al., 2010 | ||
| Copper chaperone for superoxide dismutase | Q9WU84 | 1-274 | peptide-Leu52+Val-peptide | P | MS | Gln | Met | Val | Leu | Val | Gln | Thr | Thr | Impens et al., 2010 | ||
| Copper transport protein ATOX1 | O08997 | 1-68 | peptide-Asp9+Met-peptide | P | MS | Phe | Ser | Val | Asp | Met | Thr | Cys | Glu | Impens et al., 2010 | ||
| Core histone macro-H2A.1 | Q9QZQ8 | 1-372 | peptide-Leu56+Thr-peptide | P | MS | Leu | Glu | Tyr | Leu | Thr | Ala | Glu | Ile | Melzer et al., 2012 | ||
| Core histone macro-H2A.1 | Q9QZQ8 | 1-372 | peptide-Ala58+Glu-peptide | P | MS | Tyr | Leu | Thr | Ala | Glu | Ile | Leu | Glu | Melzer et al., 2012 | ||
| Core histone macro-H2A.1 | Q9QZQ8 | 1-372 | peptide-Glu59+Ile-peptide | P | MS | Leu | Thr | Ala | Glu | Ile | Leu | Glu | Leu | Melzer et al., 2012 | ||
| Core histone macro-H2A.1 | Q9QZQ8 | 1-372 | peptide-Leu61+Glu-peptide | P | MS | Ala | Glu | Ile | Leu | Glu | Leu | Ala | Gly | Melzer et al., 2012 | ||
| Core histone macro-H2A.2 | Q8CCK0 | 1-372 | peptide-Ala58+Glu-peptide | P | MS | Tyr | Leu | Ala | Ala | Glu | Ile | Leu | Glu | Melzer et al., 2012 | ||
| Core histone macro-H2A.2 | Q8CCK0 | 1-372 | peptide-Glu59+Ile-peptide | P | MS | Leu | Ala | Ala | Glu | Ile | Leu | Glu | Leu | Melzer et al., 2012 | ||
| Core histone macro-H2A.2 | Q8CCK0 | 1-372 | peptide-Leu61+Glu-peptide | P | MS | Ala | Glu | Ile | Leu | Glu | Leu | Ala | Gly | Melzer et al., 2012 | ||
| Coronin-1A | O89053 | 2-461 | peptide-Leu392+Lys-peptide | P | MS | Leu | Ile | Ser | Leu | Lys | Asp | Gly | Tyr | Impens et al., 2010 | ||
| Coronin-1A | O89053 | 2-461 | peptide-Phe59+Leu-peptide | P | MS | Gly | Gly | Ala | Phe | Leu | Val | Leu | Pro | Impens et al., 2010 | ||
| Coronin-1A | O89053 | 2-461 | peptide-Phe228+Val-peptide | P | MS | His | Ala | Val | Phe | Val | Ser | Glu | Gly | Impens et al., 2010 | ||
| cystatin C | P01034 | 27-146 | peptide-Tyr128+Ala-peptide | P | Phe | Gln | Ile | Tyr | Ala | Val | Pro | Trp | Lenarcic et al., 1991 | 3150 | ||
| cystatin C | P01034 | 27-146 | peptide-Leu138+Ser-peptide | P | Thr | Met | Thr | Leu | Ser | Lys | Ser | Thr | Lenarcic et al., 1991 | 3151 | ||
| cystatin C | P01034 | 27-146 | peptide-Phe55+Ala-peptide | P | Ala | Leu | Asp | Phe | Ala | Val | Gly | Glu | Lenarcic et al., 1991 | 3148 | ||
| cystatin C | P01034 | 27-146 | peptide-Leu90+Asp-peptide | P | Asn | Tyr | Phe | Leu | Asp | Val | Glu | Leu | Lenarcic et al., 1991 | 3149 | ||
| Cystatin-B | Q62426 | 1-98 | peptide-Phe38+Lys-peptide | P | MS | Phe | Asp | Val | Phe | Lys | Ala | Ile | Ser | Impens et al., 2010 | ||
| Cytochrome c, somatic | P62897 | 2-105 | peptide-Phe83+Ala-peptide | P | MS | Lys | Met | Ile | Phe | Ala | Gly | Ile | Lys | Impens et al., 2010 | ||
| Cytoplasmic dynein 1 heavy chain 1 | Q9JHU4 | 1-4644 | peptide-Phe3352+Ser-peptide | P | MS | Ile | Val | Asn | Phe | Ser | Ala | Glu | Glu | Impens et al., 2010 | ||
| Cytoplasmic dynein 1 light intermediate chain 2 | Q6PDL0 | 1-492 | peptide-Leu363+Met-peptide | P | MS | Gln | Val | Phe | Leu | Met | Lys | Gln | Gln | Impens et al., 2010 | ||
| D-3-phosphoglycerate dehydrogenase | Q61753 | 2-533 | peptide-Phe222+Ala-peptide | P | MS | Asp | Ser | Thr | Phe | Ala | Gln | Cys | Lys | Impens et al., 2010 | ||
| D-3-phosphoglycerate dehydrogenase | Q61753 | 2-533 | peptide-Leu10+Ile-peptide | P | MS | Arg | Lys | Val | Leu | Ile | Ser | Asp | Ser | Impens et al., 2010 | ||
| Death-associated protein 1 | Q91XC8 | 2-102 | peptide-Phe58+Ile-peptide | P | MS | Pro | Thr | Val | Phe | Ile | Ser | Gly | Val | Impens et al., 2010 | ||
| dermcidin | P81605 | 20-110 | peptide-Leu91+Glu-peptide | P | Val | Glu | Asp | Leu | Glu | Ser | Val | Gly | Baechle et al., 2006 | 19366 | ||
| dermcidin | P81605 | 20-110 | peptide-Leu106+Asp-peptide | P | Lys | Asp | Val | Leu | Asp | Ser | Val | Leu | Baechle et al., 2006 | 19367 | ||
| Destrin | Q9R0P5 | 2-165 | peptide-Ser88+Phe-peptide | P | MS | Tyr | Asp | Ala | Ser | Phe | Glu | Thr | Lys | Impens et al., 2010 | ||
| Destrin | Q9R0P5 | 2-165 | peptide-Leu84+Tyr-peptide | P | MS | Arg | Tyr | Ala | Leu | Tyr | Asp | Ala | Ser | Impens et al., 2010 | ||
| Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial | Q9D2G2 | 69-454 | peptide-Phe252+Asn-peptide | P | MS | Leu | Thr | Thr | Phe | Asn | Glu | Val | Asp | Impens et al., 2010 | ||
| DNA polymerase epsilon subunit 3 | Q9JKP7 | 2-145 | peptide-Leu46+Tyr-peptide | P | MS | Val | Phe | Val | Leu | Tyr | Ala | Thr | Ser | Impens et al., 2010 | ||
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 | P62876 | 1-67 | peptide-Glu28+Tyr-peptide | P | MS | Leu | Gln | Ala | Glu | Tyr | Thr | Glu | Gly | Impens et al., 2010 | ||
| DnaJ homolog subfamily C member 8 | Q6NZB0 | 2-253 | peptide-Leu62+Gln-peptide | P | MS | Phe | Glu | Val | Leu | Gln | Ile | Asp | Pro | Impens et al., 2010 | ||
| DnaJ homolog subfamily C member 8 | Q6NZB0 | 2-253 | peptide-Phe23+Tyr-peptide | P | MS | Phe | Met | Thr | Phe | Tyr | Ser | Glu | Val | Impens et al., 2010 | ||
| Docking protein 3 | Q9QZK7 | 1-444 | peptide-Leu405+Glu-peptide | P | MS | Leu | Leu | Glu | Leu | Glu | Leu | Asp | Glu | Impens et al., 2010 | ||
| Dynactin subunit 1 | O08788 | 1-1281 | peptide-Leu62+Asp-peptide | P | MS | Gly | Val | Ile | Leu | Asp | Glu | Ala | Lys | Impens et al., 2010 | ||
| Dynactin subunit 2 | Q99KJ8 | 2-402 | peptide-Leu89+Gly-peptide | P | MS | Tyr | Glu | Met | Leu | Gly | Glu | Gly | Leu | Impens et al., 2010 | ||
| Dynactin subunit 2 | Q99KJ8 | 2-402 | peptide-Leu371+Leu-peptide | P | MS | Asn | Thr | Ala | Leu | Leu | Thr | Gln | Val | Impens et al., 2010 | ||
| Dynactin subunit 2 | Q99KJ8 | 2-402 | peptide-Leu38+Ser-peptide | P | MS | Ala | Glu | Glu | Leu | Ser | Ser | Thr | Ser | Impens et al., 2010 | ||
| Dynactin subunit 6 | Q9WUB4 | 1-190 | peptide-Phe134+Glu-peptide | P | MS | Leu | Asn | Thr | Phe | Glu | Ala | Ile | Pro | Impens et al., 2010 | ||
| Eculizumab heavy chain | 1-448 | peptide-Gly102+Ser- peptide | P | Tyr | Phe | Phe | Gly | Ser | Ser | Pro | Asn | Caval et al., 2021 | ||||
| Eculizumab heavy chain | 1-448 | peptide-Ser103+Ser- peptide | P | Phe | Phe | Gly | Ser | Ser | Pro | Asn | Trp | Caval et al., 2021 | ||||
| Eculizumab heavy chain | 1-448 | peptide-Phe100+Phe- peptide | P | Ala | Arg | Tyr | Phe | Phe | Gly | Ser | Ser | Caval et al., 2021 | ||||
| Eculizumab heavy chain | 1-448 | peptide-Val241+Phe- peptide | P | Gly | Pro | Ser | Val | Phe | Leu | Phe | Pro | Caval et al., 2021 | ||||
| Eculizumab heavy chain | 1-448 | peptide-Phe242+Leu- peptide | P | Pro | Ser | Val | Phe | Leu | Phe | Pro | Pro | Caval et al., 2021 | ||||
| Eculizumab heavy chain | 1-448 | peptide-Leu243+Phe- peptide | P | Ser | Val | Phe | Leu | Phe | Pro | Pro | Lys | Caval et al., 2021 | ||||
| Electron transfer flavoprotein subunit beta | Q9DCW4 | 2-255 | peptide-Phe149+Ala-peptide | P | MS | Gln | Gly | Thr | Phe | Ala | Ser | Gln | Val | Impens et al., 2010 | ||
| eledoisin | P62934 | 1-11 | peptide-Phe7+Ile-peptide | N | Lys | Asp | Ala | Phe | Ile | Gly | Leu | Met | Kageyama et al., 1995 | 26570 | ||
| Elongation factor 1-alpha 1 | P10126 | 1-462 | peptide-Ser414+Phe-peptide | P | MS | Cys | Val | Glu | Ser | Phe | Ser | Asp | Tyr | Impens et al., 2010 | ||
| Elongation factor 1-alpha 1 | P10126 | 1-462 | peptide-Leu114+Ile-peptide | P | MS | Cys | Ala | Val | Leu | Ile | Val | Ala | Ala | Impens et al., 2010 | ||
| Elongation factor 1-alpha 1 | P10126 | 1-462 | peptide-Leu148+Ile-peptide | P | MS | Val | Lys | Gln | Leu | Ile | Val | Gly | Val | Impens et al., 2010 | ||
| Elongation factor 1-alpha 1 | P10126 | 1-462 | peptide-Tyr254+Lys-peptide | P | MS | Gln | Asp | Val | Tyr | Lys | Ile | Gly | Gly | Impens et al., 2010 | ||
| Elongation factor 1-alpha 1 | P10126 | 1-462 | peptide-Trp58+Val-peptide | P | MS | Lys | Tyr | Ala | Trp | Val | Leu | Asp | Lys | Impens et al., 2010 | ||
| Elongation factor 1-alpha 2 | P62631 | 1-463 | peptide-Trp58+Val-peptide | P | MS | Lys | Tyr | Ala | Trp | Val | Leu | Asp | Lys | Melzer et al., 2012 | ||
| Elongation factor 1-alpha 2 | P62631 | 1-463 | peptide-Leu114+Ile-peptide | P | MS | Cys | Ala | Val | Leu | Ile | Val | Ala | Ala | Melzer et al., 2012 | ||
| Elongation factor 1-alpha 2 | P62631 | 1-463 | peptide-Tyr254+Lys-peptide | P | MS | Gln | Asp | Val | Tyr | Lys | Ile | Gly | Gly | Melzer et al., 2012 | ||
| Elongation factor 1-gamma | Q9D8N0 | 2-437 | peptide-Leu19+Ile-peptide | P | MS | Phe | Lys | Ala | Leu | Ile | Ala | Ala | Gln | Impens et al., 2010 | ||
| Elongation factor 2 | P58252 | 2-858 | peptide-Tyr397+Ile-peptide | P | MS | Leu | Met | Met | Tyr | Ile | Ser | Lys | Met | Impens et al., 2010 | ||
| Elongation factor 2 | P58252 | 2-858 | peptide-Phe417+Ser-peptide | P | MS | Gly | Arg | Val | Phe | Ser | Gly | Val | Val | Impens et al., 2010 | ||
| Elongation factor 2 | P58252 | 2-858 | peptide-Phe4+Thr-peptide | P | MS | - | - | Asn | Phe | Thr | Val | Asp | Gln | Impens et al., 2010 | ||
| Elongation factor 2 | P58252 | 2-858 | peptide-Tyr232+Val-peptide | P | MS | Ala | Glu | Met | Tyr | Val | Ala | Lys | Phe | Impens et al., 2010 | ||
| Ena/VASP-like protein | P70429 | 1-414 | peptide-Ala108+Leu-peptide | P | MS | Met | Leu | Phe | Ala | Leu | Asn | Ile | Met | Impens et al., 2010 | ||
| Endophilin-B1 | Q9JK48 | 1-365 | peptide-Leu118+Ile-peptide | P | MS | Gly | Asn | Ala | Leu | Ile | Lys | Cys | Gly | Impens et al., 2010 | ||
| Endophilin-B1 | Q9JK48 | 1-365 | peptide-Phe6+Asn-peptide | P | MS | Ile | Met | Asp | Phe | Asn | Val | Lys | Lys | Impens et al., 2010 | ||
| Endoplasmic reticulum resident protein 29 | P57759 | 35-262 | peptide-Phe62+Asp-peptide | P | MS | Leu | Val | Lys | Phe | Asp | Thr | Gln | Tyr | Impens et al., 2010 | ||
| Endoplasmic reticulum resident protein 29 | P57759 | 35-262 | peptide-Phe170+Ile-peptide | P | MS | Ala | Gly | Glu | Phe | Ile | Lys | Ala | Ser | Impens et al., 2010 | ||
| Endoplasmic reticulum resident protein 29 | P57759 | 35-262 | peptide-Leu59+Val-peptide | P | MS | Lys | Phe | Val | Leu | Val | Lys | Phe | Asp | Impens et al., 2010 | ||
| Enhanced at puberty protein 1 | Q8K3X4 | 1-775 | peptide-Leu763+Ala-peptide | P | MS | Ala | Thr | Ile | Leu | Ala | Gly | Asp | Val | Impens et al., 2010 | ||
| Enhanced at puberty protein 1 | Q8K3X4 | 1-775 | peptide-Thr761+Ile-peptide | P | MS | Glu | Ile | Ala | Thr | Ile | Leu | Ala | Gly | Impens et al., 2010 | ||
| ES1 protein homolog, mitochondrial | Q9D172 | 40-266 | peptide-Phe144+Ala-peptide | P | MS | Leu | Ser | Thr | Phe | Ala | Val | Asp | Gly | Impens et al., 2010 | ||
| Ester hydrolase C11orf54 homolog | Q91V76 | 1-315 | peptide-Leu160+Phe-peptide | P | MS | Leu | Ala | Asn | Leu | Phe | Ala | Ser | Glu | Impens et al., 2010 | ||
| Ester hydrolase C11orf54 homolog | Q91V76 | 1-315 | peptide-Phe253+Val-peptide | P | MS | Leu | Pro | Val | Phe | Val | Ser | Lys | Asp | Impens et al., 2010 | ||
| Eukaryotic initiation factor 4A-I | P60843 | 2-406 | peptide-Tyr48+Ala-peptide | P | MS | Arg | Gly | Ile | Tyr | Ala | Tyr | Gly | Phe | Melzer et al., 2012 | ||
| Eukaryotic initiation factor 4A-II | P10630 | 1-407 | peptide-Tyr49+Ala-peptide | P | MS | Arg | Gly | Ile | Tyr | Ala | Tyr | Gly | Phe | Impens et al., 2010 | ||
| Eukaryotic initiation factor 4A-III | Q91VC3 | 2-411 | peptide-Tyr54+Ala-peptide | P | MS | Arg | Gly | Ile | Tyr | Ala | Tyr | Gly | Phe | Melzer et al., 2012 | ||
| Eukaryotic translation initiation factor 2 subunit 3, X-linked | Q9Z0N1 | 2-472 | peptide-Leu23+Asp-peptide | P | MS | Leu | Ala | Thr | Leu | Asp | Val | Thr | Lys | Impens et al., 2010 | ||
| Eukaryotic translation initiation factor 2 subunit 3, X-linked | Q9Z0N1 | 2-472 | peptide-Leu404+Met-peptide | P | MS | Asn | Glu | Val | Leu | Met | Val | Asn | Ile | Impens et al., 2010 | ||
| Eukaryotic translation initiation factor 2 subunit 3, Y-linked | Q9Z0N2 | 2-472 | peptide-Leu404+Met-peptide | P | MS | Asn | Glu | Val | Leu | Met | Val | Asn | Ile | Melzer et al., 2012 | ||
| Eukaryotic translation initiation factor 3 subunit J | Q66JS6 | 2-263 | peptide-Leu136+Ala-peptide | P | MS | Asp | Leu | Glu | Leu | Ala | Lys | Glu | Thr | Impens et al., 2010 | ||
| Eukaryotic translation initiation factor 3 subunit J-A | Q3UGC7 | 2-261 | peptide-Leu134+Ala-peptide | P | MS | Asp | Leu | Glu | Leu | Ala | Lys | Glu | Thr | Melzer et al., 2012 | ||
| Eukaryotic translation initiation factor 4E | P63073 | 2-217 | peptide-Phe142+Asp-peptide | P | MS | Gly | Glu | Ser | Phe | Asp | Asp | Tyr | Ser | Impens et al., 2010 | ||
| Eukaryotic translation initiation factor 4H | Q9WUK2 | 2-248 | peptide-Phe89+Asp-peptide | P | MS | Tyr | Val | Glu | Phe | Asp | Glu | Val | Asp | Impens et al., 2010 | ||
| Eukaryotic translation initiation factor 5A-1 | P63242 | 2-154 | peptide-Leu5+Asp-peptide | P | MS | - | Asp | Asp | Leu | Asp | Phe | Glu | Thr | Impens et al., 2010 | ||
| Eukaryotic translation initiation factor 5A-1 | P63242 | 2-154 | peptide-Phe7+Glu-peptide | P | MS | Asp | Leu | Asp | Phe | Glu | Thr | Gly | Asp | Impens et al., 2010 | ||
| Eukaryotic translation initiation factor 5A-1 | P63242 | 2-154 | peptide-Asp6+Phe-peptide | P | MS | Asp | Asp | Leu | Asp | Phe | Glu | Thr | Gly | Impens et al., 2010 | ||
| Eukaryotic translation initiation factor 5A-1 | P63242 | 2-154 | peptide-Leu91+Ile-peptide | P | MS | Asp | Phe | Gln | Leu | Ile | Gly | Ile | Gln | Impens et al., 2010 | ||
| Eukaryotic translation initiation factor 5A-1 | P63242 | 2-154 | peptide-Leu101+Leu-peptide | P | MS | Tyr | Leu | Ser | Leu | Leu | Gln | Asp | Ser | Impens et al., 2010 | ||
| Eukaryotic translation initiation factor 5A-1 | P63242 | 2-154 | peptide-Tyr98+Leu-peptide | P | MS | Gln | Asp | Gly | Tyr | Leu | Ser | Leu | Leu | Impens et al., 2010 | ||
| Eukaryotic translation initiation factor 5A-1 | P63242 | 2-154 | peptide-Gly97+Tyr-peptide | P | MS | Ile | Gln | Asp | Gly | Tyr | Leu | Ser | Leu | Impens et al., 2010 | ||
| F-actin-capping protein subunit alpha-1 | P47753 | 2-286 | peptide-Leu38+Leu-peptide | P | MS | Asp | Val | Arg | Leu | Leu | Leu | Asn | Asn | Impens et al., 2010 | ||
| F-actin-capping protein subunit alpha-2 | P47754 | 2-286 | peptide-Leu38+Leu-peptide | P | MS | Asp | Val | Arg | Leu | Leu | Leu | Asn | Asn | Melzer et al., 2012 | ||
| F-actin-capping protein subunit beta | P47757 | 2-277 | peptide-Leu39+Leu-peptide | P | MS | Cys | Glu | Asp | Leu | Leu | Ser | Ser | Val | Impens et al., 2010 | ||
| Far upstream element-binding protein 2 | Q3U0V1 | 1-748 | peptide-Leu270+Ile-peptide | P | MS | Lys | Met | Ile | Leu | Ile | Gln | Asp | Gly | Impens et al., 2010 | ||
| Farnesyl pyrophosphate synthase | Q920E5 | 1-353 | peptide-Phe341+Met-peptide | P | MS | Pro | Ser | Ile | Phe | Met | Glu | Leu | Ala | Impens et al., 2010 | ||
| Ferritin heavy chain | P09528 | 2-182 | peptide-Leu139+Ser-peptide | P | MS | Thr | Tyr | Tyr | Leu | Ser | Glu | Gln | Val | Impens et al., 2010 | ||
| Ferritin heavy chain | P09528 | 2-182 | peptide-Tyr137+Tyr-peptide | P | MS | Ile | Glu | Thr | Tyr | Tyr | Leu | Ser | Glu | Impens et al., 2010 | ||
| FGF1 fibroblast growth factor 1 (acidic) | P03968 | 117-126 | peptide-Phe123+Val-peptide | N | Lys | His | Trp | Phe | Val | Gly | Leu | Lys | Kageyama et al., 1995 | 26582 | ||
| FGF2 fibroblast growth factor 2 (basic) | P03969 | 115-129 | peptide-Tyr124+Val-peptide | N | Ser | Ser | Trp | Tyr | Val | Ala | Leu | Lys | Kageyama et al., 1995 | 26579 | ||
| FH1/FH2 domain-containing protein 1 | Q6P9Q4 | 2-1197 | peptide-Leu1143+Leu-peptide | P | MS | Ile | Met | Asp | Leu | Leu | Val | Gln | Ser | Impens et al., 2010 | ||
| fibrinogen alpha chain | P02671 | 36-866 | peptide-Lys219+Ser-peptide | P | Gly | Asn | Phe | Lys | Ser | Gln | Leu | Gln | Simon et al., 1994 | 15760 | ||
| fibrinogen alpha chain | P02671 | 36-866 | peptide-Phe394+Glu-peptide | P | Trp | Gly | Thr | Phe | Glu | Glu | Val | Ser | Simon et al., 1994 | 15761 | ||
| fibrinogen alpha chain | P02671 | 36-866 | peptide-Phe521+Val-peptide | P | Leu | Gly | Glu | Phe | Val | Ser | Glu | Thr | Simon et al., 1994 | 15762 | ||
| Flap endonuclease 1 | P39749 | 1-378 | peptide-Phe341+Phe-peptide | P | MS | Leu | Asp | Asp | Phe | Phe | Lys | Val | Thr | Impens et al., 2010 | ||
| Flap endonuclease 1 | P39749 | 1-378 | peptide-Phe307+Met-peptide | P | MS | Leu | Val | Lys | Phe | Met | Cys | Gly | Glu | Impens et al., 2010 | ||
| Flavin reductase | Q923D2 | 2-206 | peptide-Leu74+Leu-peptide | P | MS | Val | Ile | Val | Leu | Leu | Gly | Thr | Gly | Impens et al., 2010 | ||
| Fructose-bisphosphate aldolase A | P05064 | 2-364 | peptide-Leu31+Ala-peptide | P | MS | Lys | Gly | Ile | Leu | Ala | Ala | Asp | Glu | Impens et al., 2010 | ||
| Fructose-bisphosphate aldolase A | P05064 | 2-364 | peptide-Ala33+Asp-peptide | P | MS | Ile | Leu | Ala | Ala | Asp | Glu | Ser | Thr | Impens et al., 2010 | ||
| Fructose-bisphosphate aldolase A | P05064 | 2-364 | peptide-Pro185+Ile-peptide | P | MS | Gly | Ile | Val | Pro | Ile | Val | Glu | Pro | Impens et al., 2010 | ||
| Fructose-bisphosphate aldolase A | P05064 | 2-364 | peptide-Tyr174+Ala-peptide | P | MS | Leu | Ala | Arg | Tyr | Ala | Ser | Ile | Cys | Melzer et al., 2012 | ||
| Fructose-bisphosphate aldolase A | P05064 | 2-364 | peptide-Ala250+Met-peptide | P | MS | Glu | Glu | Ile | Ala | Met | Ala | Thr | Val | Melzer et al., 2012 | ||
| Fructose-bisphosphate aldolase C | P05063 | 2-363 | peptide-Tyr174+Ala-peptide | P | MS | Leu | Ala | Arg | Tyr | Ala | Ser | Ile | Cys | Impens et al., 2010 | ||
| Fructose-bisphosphate aldolase C | P05063 | 2-363 | peptide-Ala250+Met-peptide | P | MS | Glu | Glu | Ile | Ala | Met | Ala | Thr | Val | Impens et al., 2010 | ||
| Fructose-bisphosphate aldolase C | P05063 | 2-363 | peptide-Pro185+Ile-peptide | P | MS | Gly | Ile | Val | Pro | Ile | Val | Glu | Pro | Melzer et al., 2012 | ||
| G-protein-signaling modulator 3 | Q3U1Z5 | 1-159 | peptide-Leu64+Leu-peptide | P | MS | Thr | Glu | Leu | Leu | Leu | Asp | Leu | Val | Impens et al., 2010 | ||
| G-protein-signaling modulator 3 | Q3U1Z5 | 1-159 | peptide-Leu63+Leu-peptide | P | MS | Gln | Thr | Glu | Leu | Leu | Leu | Asp | Leu | Impens et al., 2010 | ||
| Galectin-3 | P16110 | 2-264 | peptide-Leu145+Ile-peptide | P | MS | Pro | Arg | Met | Leu | Ile | Thr | Ile | Met | Impens et al., 2010 | ||
| Gamma-enolase | P17183 | 1-434 | peptide-Asp23+Leu-peptide | P | MS | Val | Glu | Val | Asp | Leu | Tyr | Thr | Ala | Melzer et al., 2012 | ||
| Gamma-enolase | P17183 | 1-434 | peptide-Leu24+Tyr-peptide | P | MS | Glu | Val | Asp | Leu | Tyr | Thr | Ala | Lys | Melzer et al., 2012 | ||
| Gamma-enolase | P17183 | 1-434 | peptide-Gly243+Met-peptide | P | MS | Met | Val | Ile | Gly | Met | Asp | Val | Ala | Melzer et al., 2012 | ||
| Gamma-enolase | P17183 | 1-434 | peptide-Met244+Asp-peptide | P | MS | Val | Ile | Gly | Met | Asp | Val | Ala | Ala | Melzer et al., 2012 | ||
| Gamma-enolase | P17183 | 1-434 | peptide-Asp383+Leu-peptide | P | MS | Phe | Ile | Ala | Asp | Leu | Val | Val | Gly | Melzer et al., 2012 | ||
| Gamma-enolase | P17183 | 1-434 | peptide-Leu384+Val-peptide | P | MS | Ile | Ala | Asp | Leu | Val | Val | Gly | Leu | Melzer et al., 2012 | ||
| Gamma-enolase | P17183 | 1-434 | peptide-Gly387+Leu-peptide | P | MS | Leu | Val | Val | Gly | Leu | Cys | Thr | Gly | Melzer et al., 2012 | ||
| Gamma-enolase | P17183 | 1-434 | peptide-Leu388+Cys-peptide | P | MS | Val | Val | Gly | Leu | Cys | Thr | Gly | Gln | Melzer et al., 2012 | ||
| Gamma-parvin | Q9ERD8 | 1-331 | peptide-Leu9+Leu-peptide | P | MS | Leu | Tyr | Asp | Leu | Leu | Gln | Leu | Pro | Impens et al., 2010 | ||
| Gelsolin | P13020 | 26-780 | peptide-Thr508+Ala-peptide | P | MS | Ala | Ile | Leu | Thr | Ala | Gln | Leu | Asp | Impens et al., 2010 | ||
| Gelsolin | P13020 | 26-780 | peptide-Leu536+Phe-peptide | P | MS | Leu | Met | Ser | Leu | Phe | Gly | Gly | Lys | Impens et al., 2010 | ||
| Gelsolin | P13020 | 26-780 | peptide-Leu507+Thr-peptide | P | MS | Ser | Ala | Ile | Leu | Thr | Ala | Gln | Leu | Impens et al., 2010 | ||
| Gelsolin | P13020 | 26-780 | peptide-Leu312+Val-peptide | P | MS | Ser | Val | Ser | Leu | Val | Ala | Asp | Glu | Impens et al., 2010 | ||
| Glia maturation factor beta | Q9CQI3 | 2-142 | peptide-Asp9+Val-peptide | P | MS | Val | Val | Cys | Asp | Val | Ala | Glu | Asp | Impens et al., 2010 | ||
| Glucose-6-phosphate isomerase | P06745 | 2-558 | peptide-Glu169+Ala-peptide | P | MS | Met | Val | Thr | Glu | Ala | Leu | Lys | Pro | Impens et al., 2010 | ||
| Glucose-6-phosphate isomerase | P06745 | 2-558 | peptide-Leu430+Ala-peptide | P | MS | Ala | Asn | Phe | Leu | Ala | Gln | Thr | Glu | Impens et al., 2010 | ||
| Glucose-6-phosphate isomerase | P06745 | 2-558 | peptide-Thr168+Glu-peptide | P | MS | Leu | Met | Val | Thr | Glu | Ala | Leu | Lys | Impens et al., 2010 | ||
| Glucose-6-phosphate isomerase | P06745 | 2-558 | peptide-Thr433+Glu-peptide | P | MS | Leu | Ala | Gln | Thr | Glu | Ala | Leu | Met | Impens et al., 2010 | ||
| Glucose-6-phosphate isomerase | P06745 | 2-558 | peptide-Tyr351+Phe-peptide | P | MS | Phe | Ala | Ala | Tyr | Phe | Gln | Gln | Gly | Impens et al., 2010 | ||
| Glucose-6-phosphate isomerase | P06745 | 2-558 | peptide-Phe429+Leu-peptide | P | MS | Leu | Ala | Asn | Phe | Leu | Ala | Gln | Thr | Impens et al., 2010 | ||
| Glucose-6-phosphate isomerase | P06745 | 2-558 | peptide-Leu436+Met-peptide | P | MS | Thr | Glu | Ala | Leu | Met | Lys | Gly | Lys | Impens et al., 2010 | ||
| Glucose-6-phosphate isomerase | P06745 | 2-558 | peptide-Gln432+Thr-peptide | P | MS | Phe | Leu | Ala | Gln | Thr | Glu | Ala | Leu | Impens et al., 2010 | ||
| Glucose-6-phosphate isomerase | P06745 | 2-558 | peptide-Leu68+Val-peptide | P | MS | Met | Gln | Met | Leu | Val | Glu | Leu | Ala | Impens et al., 2010 | ||
| Glutaredoxin-3 | Q9CQM9 | 2-337 | peptide-Leu91+Phe-peptide | P | MS | Pro | Thr | Phe | Leu | Phe | Phe | Lys | Asn | Impens et al., 2010 | ||
| Glutaredoxin-3 | Q9CQM9 | 2-337 | peptide-Phe92+Phe-peptide | P | MS | Thr | Phe | Leu | Phe | Phe | Lys | Asn | Ser | Impens et al., 2010 | ||
| Glutathione reductase, mitochondrial | P47791 | 27-500 | peptide-Tyr45+Leu-peptide | P | MS | Ser | Phe | Asp | Tyr | Leu | Val | Ile | Gly | Impens et al., 2010 | ||
| Glutathione reductase, mitochondrial | P47791 | 27-500 | peptide-Leu46+Val-peptide | P | MS | Phe | Asp | Tyr | Leu | Val | Ile | Gly | Gly | Impens et al., 2010 | ||
| Glutathione S-transferase Mu 1 | P10649 | 2-218 | peptide-Glu22+Tyr-peptide | P | MS | Met | Leu | Leu | Glu | Tyr | Thr | Asp | Ser | Impens et al., 2010 | ||
| Glutathione S-transferase omega-1 | O09131 | 1-240 | peptide-Leu39+Met-peptide | P | MS | Gln | Arg | Thr | Leu | Met | Val | Leu | Lys | Impens et al., 2010 | ||
| Glyceraldehyde-3-phosphate dehydrogenase | P16858 | 2-333 | peptide-Phe100+Thr-peptide | P | MS | Thr | Gly | Val | Phe | Thr | Thr | Met | Glu | Impens et al., 2010 | ||
| Glycogen phosphorylase, liver form | Q9ET01 | 2-850 | peptide-Leu803+Lys-peptide | P | MS | Thr | Met | Val | Leu | Lys | Asn | Ile | Ala | Impens et al., 2010 | ||
| Glycogenin-1 | Q9R062 | 2-333 | peptide-Leu286+Ser-peptide | P | MS | Leu | Ser | Asp | Leu | Ser | Phe | Gly | Glu | Impens et al., 2010 | ||
| Glycylpeptide N-tetradecanoyltransferase 1 | O70310 | 1-496 | peptide-Leu98+Phe-peptide | P | MS | Ala | Ile | Glu | Leu | Phe | Ser | Val | Gly | Impens et al., 2010 | ||
| Glycylpeptide N-tetradecanoyltransferase 1 | O70310 | 1-496 | peptide-Phe99+Ser-peptide | P | MS | Ile | Glu | Leu | Phe | Ser | Val | Gly | Gln | Impens et al., 2010 | ||
| Growth factor receptor-bound protein 2 | Q60631 | 1-217 | peptide-Leu164+Phe-peptide | P | MS | Val | Gln | Ala | Leu | Phe | Asp | Phe | Asp | Impens et al., 2010 | ||
| GTP-binding nuclear protein Ran | P62827 | 2-216 | peptide-Leu119+Cys-peptide | P | MS | Pro | Ile | Val | Leu | Cys | Gly | Asn | Lys | Impens et al., 2010 | ||
| GTP-binding nuclear protein Ran | P62827 | 2-216 | peptide-Leu15+Val-peptide | P | MS | Lys | Leu | Val | Leu | Val | Gly | Asp | Gly | Impens et al., 2010 | ||
| GTP-binding nuclear protein Ran | P62827 | 2-216 | peptide-Leu13+Val-peptide | P | MS | Gln | Phe | Lys | Leu | Val | Leu | Val | Gly | Impens et al., 2010 | ||
| Heat shock 70 kDa protein 1-like | P16627 | 1-641 | peptide-Leu441+Ile-peptide | P | MS | Pro | Gly | Val | Leu | Ile | Gln | Val | Tyr | Melzer et al., 2012 | ||
| Heat shock 70 kDa protein 1A | Q61696 | 1-641 | peptide-Leu439+Ile-peptide | P | MS | Pro | Gly | Val | Leu | Ile | Gln | Val | Tyr | Melzer et al., 2012 | ||
| Heat shock 70 kDa protein 1B | P17879 | 1-642 | peptide-Leu439+Ile-peptide | P | MS | Pro | Gly | Val | Leu | Ile | Gln | Val | Tyr | Melzer et al., 2012 | ||
| Heat shock 70 kDa protein 4 | Q61316 | 1-841 | peptide-Leu676+Ala-peptide | P | MS | Val | Asp | Lys | Leu | Ala | Glu | Leu | Lys | Impens et al., 2010 | ||
| Heat shock cognate 71 kDa protein | P63017 | 2-646 | peptide-Asn141+Ala-peptide | P | MS | Thr | Val | Thr | Asn | Ala | Val | Val | Thr | Impens et al., 2010 | ||
| Heat shock cognate 71 kDa protein | P63017 | 2-646 | peptide-Leu50+Ile-peptide | P | MS | Thr | Glu | Arg | Leu | Ile | Gly | Asp | Ala | Impens et al., 2010 | ||
| Heat shock cognate 71 kDa protein | P63017 | 2-646 | peptide-Leu439+Ile-peptide | P | MS | Pro | Gly | Val | Leu | Ile | Gln | Val | Tyr | Impens et al., 2010 | ||
| Heat shock cognate 71 kDa protein | P63017 | 2-646 | peptide-Ala142+Val-peptide | P | MS | Val | Thr | Asn | Ala | Val | Val | Thr | Val | Impens et al., 2010 | ||
| Heat shock protein HSP 90-alpha | P07901 | 2-733 | peptide-Leu220+Phe-peptide | P | MS | Pro | Ile | Thr | Leu | Phe | Val | Glu | Lys | Impens et al., 2010 | ||
| Heme-binding protein 1 | Q9R257 | 1-190 | peptide-Leu21+Ser-peptide | P | MS | Trp | Gln | Val | Leu | Ser | Thr | Gly | Gly | Impens et al., 2010 | ||
| hemoglobin subunit alpha | P01966 | 2-142 | Val1+Leu-peptide | P | - | - | - | Val | Leu | Ser | Ala | Ala | Fruitier et al., 1998 | 15768 | ||
| hemoglobin subunit alpha | P01966 | 2-142 | peptide-Tyr24+Gly-peptide | P | Ala | Ala | Glu | Tyr | Gly | Ala | Glu | Ala | Fruitier et al., 1998 | 15767 | ||
| hemoglobin subunit alpha | P01966 | 2-142 | peptide-Met32+Phe-peptide | P | Leu | Glu | Arg | Met | Phe | Leu | Ser | Phe | Fruitier et al., 1998 | 18796 | ||
| hemoglobin subunit alpha | P01966 | 2-142 | peptide-Thr107+Leu-peptide | P | Leu | Leu | Val | Thr | Leu | Ala | Ser | His | Fruitier et al., 1998 | 15766 | ||
| hemoglobin subunit alpha | P01966 | 2-142 | peptide-Ser133+Thr-peptide | P | Ala | Asn | Val | Ser | Thr | Val | Leu | Thr | Fruitier et al., 1998 | 15765 | ||
| hemoglobin subunit alpha | P01966 | 2-142 | peptide-Leu136+Thr-peptide | P | Ser | Thr | Val | Leu | Thr | Ser | Lys | Tyr | Fruitier et al., 1998 | 15763 | ||
| hemoglobin subunit alpha | P69905 | 2-142 | peptide-Leu29+Glu-peptide | N | Ala | Glu | Ala | Leu | Glu | Arg | Met | Phe | Brindley et al., 2001 | 15771 | ||
| hemoglobin subunit alpha | P69905 | 2-142 | peptide-Phe33+Leu-peptide | N | Glu | Arg | Met | Phe | Leu | Ser | Phe | Pro | Brindley et al., 2001 | 15773 | ||
| hemoglobin subunit alpha | P69905 | 2-142 | peptide-Phe36+Pro-peptide | N | Phe | Leu | Ser | Phe | Pro | Thr | Thr | Lys | Brindley et al., 2001 | 15774 | ||
| hemoglobin subunit alpha | P69905 | 2-142 | peptide-Leu105+Leu-peptide | N | Ser | His | Cys | Leu | Leu | Val | Thr | Leu | Brindley et al., 2001 | 15769 | ||
| hemoglobin subunit alpha | P69905 | 2-142 | peptide-Thr108+Leu-peptide | N | Leu | Leu | Val | Thr | Leu | Ala | Ala | His | Brindley et al., 2001 | 15776 | ||
| hemoglobin subunit alpha | P69905 | 2-142 | peptide-Leu109+Ala-peptide | N | Leu | Val | Thr | Leu | Ala | Ala | His | Leu | Brindley et al., 2001 | 15770 | ||
| hemoglobin subunit alpha | P69905 | 2-142 | peptide-Phe128+Leu-peptide | N | Leu | Asp | Lys | Phe | Leu | Ala | Ser | Val | Brindley et al., 2001 | 15772 | ||
| hemoglobin subunit alpha | P69905 | 2-142 | peptide-Ser136+Thr-peptide | N | Ala | Ser | Val | Ser | Thr | Val | Leu | Thr | Brindley et al., 2001 | 15775 | ||
| hemoglobin subunit beta | P02070 | 1-145 | peptide-Glu6+Lys-peptide | P | Thr | Ala | Glu | Glu | Lys | Ala | Ala | Val | Fruitier et al., 1998 | 15777 | ||
| hemoglobin subunit beta | P02070 | 1-145 | peptide-Phe13+Trp-peptide | P | Val | Thr | Ala | Phe | Trp | Gly | Lys | Val | Fruitier et al., 1998 | 15780 | ||
| hemoglobin subunit beta | P02070 | 1-145 | peptide-Leu30+Leu-peptide | P | Leu | Gly | Arg | Leu | Leu | Val | Val | Tyr | Fruitier et al., 1998 | |||
| hemoglobin subunit beta | P02070 | 1-145 | peptide-Leu31+Val-peptide | P | Gly | Arg | Leu | Leu | Val | Val | Tyr | Pro | Fruitier et al., 1998 | |||
| hemoglobin subunit beta | P02070 | 1-145 | peptide-Phe40+Phe-peptide | P | Thr | Gln | Arg | Phe | Phe | Glu | Ser | Phe | Fruitier et al., 1998 | |||
| hemoglobin subunit beta | P02070 | 1-145 | peptide-Phe44+Gly-peptide | P | Phe | Glu | Ser | Phe | Gly | Asp | Leu | Ser | Fruitier et al., 1998 | |||
| hemoglobin subunit beta | P02070 | 1-145 | peptide-Val53+Met-peptide | P | Ala | Asp | Ala | Val | Met | Asn | Asn | Pro | Fruitier et al., 1998 | 15783 | ||
| hemoglobin subunit beta | P68871 | 2-147 | peptide-Leu14+Trp-peptide | N | Val | Thr | Ala | Leu | Trp | Gly | Lys | Val | Brindley et al., 2001 | 15785 | ||
| hemoglobin subunit beta | P68871 | 2-147 | peptide-Leu31+Leu-peptide | N | Leu | Gly | Arg | Leu | Leu | Val | Val | Tyr | Brindley et al., 2001 | 15778 | ||
| hemoglobin subunit beta | P68871 | 2-147 | peptide-Leu32+Val-peptide | N | Gly | Arg | Leu | Leu | Val | Val | Tyr | Pro | Brindley et al., 2001 | 15779 | ||
| hemoglobin subunit beta | P68871 | 2-147 | peptide-Phe41+Phe-peptide | N | Thr | Gln | Arg | Phe | Phe | Glu | Ser | Phe | Brindley et al., 2001 | 15781 | ||
| hemoglobin subunit beta | P68871 | 2-147 | peptide-Phe45+Gly-peptide | N | Phe | Glu | Ser | Phe | Gly | Asp | Leu | Ser | Brindley et al., 2001 | 15782 | ||
| hemoglobin subunit beta | P68871 | 2-147 | peptide-Ala129+Tyr-peptide | N | Val | Gln | Ala | Ala | Tyr | Gln | Lys | Val | Brindley et al., 2001 | 15784 | ||
| hemoglobin subunit beta | P68871 | 2-147 | Val-His-Leu4+Thr-peptide | N | - | Val | His | Leu | Thr | Pro | Glu | Glu | Brindley et al., 2001 | |||
| hemoglobin subunit beta | P68871 | 2-147 | peptide-Trp15+Gly-peptide | N | Thr | Ala | Leu | Trp | Gly | Lys | Val | Asn | Brindley et al., 2001 | 15792 | ||
| hemoglobin subunit beta | P68871 | 2-147 | peptide-Phe85+Ala-peptide | N | Lys | Gly | Thr | Phe | Ala | Thr | Leu | Ser | Brindley et al., 2001 | 15791 | ||
| hemoglobin subunit beta | P68871 | 2-147 | Val-His-Leu4+Thr-peptide | P | Met | Val | His | Leu | Thr | Pro | Glu | Glu | 15786 | |||
| Hepatocyte growth factor-regulated tyrosine kinase substrate | Q99LI8 | 1-775 | peptide-Ala266+Leu-peptide | P | MS | Leu | Gln | Leu | Ala | Leu | Ala | Leu | Ser | Impens et al., 2010 | ||
| Heterogeneous nuclear ribonucleoprotein A/B | Q99020 | 1-285 | peptide-Asp103+Cys-peptide | P | MS | Glu | Val | Val | Asp | Cys | Thr | Ile | Lys | Impens et al., 2010 | ||
| Heterogeneous nuclear ribonucleoprotein A/B | Q99020 | 1-285 | peptide-Leu122+Phe-peptide | P | MS | Gly | Phe | Ile | Leu | Phe | Lys | Asp | Ser | Impens et al., 2010 | ||
| Heterogeneous nuclear ribonucleoprotein A/B | Q99020 | 1-285 | peptide-Ala187+Ile-peptide | P | MS | Glu | Ile | Glu | Ala | Ile | Glu | Leu | Pro | Impens et al., 2010 | ||
| Heterogeneous nuclear ribonucleoprotein A/B | Q99020 | 1-285 | peptide-Phe123+Lys-peptide | P | MS | Phe | Ile | Leu | Phe | Lys | Asp | Ser | Ser | Impens et al., 2010 | ||
| Heterogeneous nuclear ribonucleoprotein D0 | Q60668 | 1-355 | peptide-Asp125+Cys-peptide | P | MS | Glu | Val | Val | Asp | Cys | Thr | Leu | Lys | Impens et al., 2010 | ||
| Heterogeneous nuclear ribonucleoprotein F | Q9Z2X1 | 1-415 | peptide-Asn307+Phe-peptide | P | MS | Asp | Ile | Tyr | Asn | Phe | Phe | Ser | Pro | Melzer et al., 2012 | ||
| Heterogeneous nuclear ribonucleoprotein H | O35737 | 1-449 | peptide-Asn307+Phe-peptide | P | MS | Asp | Ile | Tyr | Asn | Phe | Phe | Ser | Pro | Impens et al., 2010 | ||
| Heterogeneous nuclear ribonucleoprotein K | P61979 | 1-463 | peptide-Met359+Ala-peptide | P | MS | Glu | Trp | Gln | Met | Ala | Tyr | Glu | Pro | Impens et al., 2010 | ||
| Heterogeneous nuclear ribonucleoprotein U-like protein 2 | Q00PI9 | 1-745 | peptide-Leu42+Glu-peptide | P | MS | Ala | Glu | Met | Leu | Glu | Asp | Glu | Ala | Impens et al., 2010 | ||
| Heterogeneous nuclear ribonucleoprotein U-like protein 2 | Q00PI9 | 1-745 | peptide-Glu40+Met-peptide | P | MS | Leu | Asp | Ala | Glu | Met | Leu | Glu | Asp | Impens et al., 2010 | ||
| Heterogeneous nuclear ribonucleoproteins A2/B1 | O88569 | 1-353 | peptide-Met72+Ala-peptide | P | MS | Phe | Ser | Ser | Met | Ala | Glu | Val | Asp | Impens et al., 2010 | ||
| Heterogeneous nuclear ribonucleoproteins A2/B1 | O88569 | 1-353 | peptide-Phe69+Ser-peptide | P | MS | Phe | Val | Thr | Phe | Ser | Ser | Met | Ala | Impens et al., 2010 | ||
| High mobility group protein B2 | P30681 | 2-210 | peptide-Phe38+Ala-peptide | P | MS | Ser | Val | Asn | Phe | Ala | Glu | Phe | Ser | Melzer et al., 2012 | ||
| High mobility group protein B3 | O54879 | 2-200 | peptide-Phe38+Ala-peptide | P | MS | Pro | Val | Asn | Phe | Ala | Glu | Phe | Ser | Impens et al., 2010 | ||
| Hippocalcin-like protein 1 | P62748 | 2-193 | peptide-Glu168+Phe-peptide | P | MS | Ser | Leu | Glu | Glu | Phe | Ile | Lys | Gly | Impens et al., 2010 | ||
| Hippocalcin-like protein 1 | P62748 | 2-193 | peptide-Phe169+Ile-peptide | P | MS | Leu | Glu | Glu | Phe | Ile | Lys | Gly | Ala | Impens et al., 2010 | ||
| Histidine triad nucleotide-binding protein 1 | P70349 | 2-126 | peptide-Gly81+Lys-peptide | P | MS | Met | Ile | Val | Gly | Lys | Lys | Cys | Ala | Impens et al., 2010 | ||
| Histidine triad nucleotide-binding protein 1 | P70349 | 2-126 | peptide-Leu77+Met-peptide | P | MS | Leu | Gly | His | Leu | Met | Ile | Val | Gly | Impens et al., 2010 | ||
| Histone H1.1 | P43275 | 2-213 | peptide-Leu45+Ile-peptide | P | MS | Val | Ser | Glu | Leu | Ile | Val | Gln | Ala | Impens et al., 2010 | ||
| Histone H1.2 | P15864 | 2-212 | peptide-Leu43+Ile-peptide | P | MS | Val | Ser | Glu | Leu | Ile | Thr | Lys | Ala | Impens et al., 2010 | ||
| Histone H1.3 | P43277 | 2-221 | peptide-Leu44+Ile-peptide | P | MS | Val | Ser | Glu | Leu | Ile | Thr | Lys | Ala | Melzer et al., 2012 | ||
| Histone H1.4 | P43274 | 2-219 | peptide-Leu43+Ile-peptide | P | MS | Val | Ser | Glu | Leu | Ile | Thr | Lys | Ala | Melzer et al., 2012 | ||
| Histone H1.5 | P43276 | 2-223 | peptide-Leu43+Ile-peptide | P | MS | Val | Ser | Glu | Leu | Ile | Thr | Lys | Ala | Impens et al., 2010 | ||
| Histone H2A type 1 | P22752 | 2-130 | peptide-Ala61+Glu-peptide | P | MS | Tyr | Leu | Thr | Ala | Glu | Ile | Leu | Glu | Impens et al., 2010 | ||
| Histone H2A type 1 | P22752 | 2-130 | peptide-Leu64+Glu-peptide | P | MS | Ala | Glu | Ile | Leu | Glu | Leu | Ala | Gly | Impens et al., 2010 | ||
| Histone H2A type 1 | P22752 | 2-130 | peptide-Glu62+Ile-peptide | P | MS | Leu | Thr | Ala | Glu | Ile | Leu | Glu | Leu | Impens et al., 2010 | ||
| Histone H2A type 1 | P22752 | 2-130 | peptide-Leu59+Thr-peptide | P | MS | Leu | Glu | Tyr | Leu | Thr | Ala | Glu | Ile | Impens et al., 2010 | ||
| Histone H2A type 1-F | Q8CGP5 | 2-130 | peptide-Leu59+Thr-peptide | P | MS | Leu | Glu | Tyr | Leu | Thr | Ala | Glu | Ile | Melzer et al., 2012 | ||
| Histone H2A type 1-F | Q8CGP5 | 2-130 | peptide-Ala61+Glu-peptide | P | MS | Tyr | Leu | Thr | Ala | Glu | Ile | Leu | Glu | Melzer et al., 2012 | ||
| Histone H2A type 1-F | Q8CGP5 | 2-130 | peptide-Glu62+Ile-peptide | P | MS | Leu | Thr | Ala | Glu | Ile | Leu | Glu | Leu | Melzer et al., 2012 | ||
| Histone H2A type 1-F | Q8CGP5 | 2-130 | peptide-Leu64+Glu-peptide | P | MS | Ala | Glu | Ile | Leu | Glu | Leu | Ala | Gly | Melzer et al., 2012 | ||
| Histone H2A type 1-H | Q8CGP6 | 2-128 | peptide-Leu59+Thr-peptide | P | MS | Leu | Glu | Tyr | Leu | Thr | Ala | Glu | Ile | Melzer et al., 2012 | ||
| Histone H2A type 1-H | Q8CGP6 | 2-128 | peptide-Ala61+Glu-peptide | P | MS | Tyr | Leu | Thr | Ala | Glu | Ile | Leu | Glu | Melzer et al., 2012 | ||
| Histone H2A type 1-H | Q8CGP6 | 2-128 | peptide-Glu62+Ile-peptide | P | MS | Leu | Thr | Ala | Glu | Ile | Leu | Glu | Leu | Melzer et al., 2012 | ||
| Histone H2A type 1-H | Q8CGP6 | 2-128 | peptide-Leu64+Glu-peptide | P | MS | Ala | Glu | Ile | Leu | Glu | Leu | Ala | Gly | Melzer et al., 2012 | ||
| Histone H2A type 1-K | Q8CGP7 | 2-130 | peptide-Leu59+Thr-peptide | P | MS | Leu | Glu | Tyr | Leu | Thr | Ala | Glu | Ile | Melzer et al., 2012 | ||
| Histone H2A type 1-K | Q8CGP7 | 2-130 | peptide-Ala61+Glu-peptide | P | MS | Tyr | Leu | Thr | Ala | Glu | Ile | Leu | Glu | Melzer et al., 2012 | ||
| Histone H2A type 1-K | Q8CGP7 | 2-130 | peptide-Glu62+Ile-peptide | P | MS | Leu | Thr | Ala | Glu | Ile | Leu | Glu | Leu | Melzer et al., 2012 | ||
| Histone H2A type 1-K | Q8CGP7 | 2-130 | peptide-Leu64+Glu-peptide | P | MS | Ala | Glu | Ile | Leu | Glu | Leu | Ala | Gly | Melzer et al., 2012 | ||
| Histone H2A type 2-A | Q6GSS7 | 2-130 | peptide-Leu59+Thr-peptide | P | MS | Leu | Glu | Tyr | Leu | Thr | Ala | Glu | Ile | Melzer et al., 2012 | ||
| Histone H2A type 2-A | Q6GSS7 | 2-130 | peptide-Ala61+Glu-peptide | P | MS | Tyr | Leu | Thr | Ala | Glu | Ile | Leu | Glu | Melzer et al., 2012 | ||
| Histone H2A type 2-A | Q6GSS7 | 2-130 | peptide-Glu62+Ile-peptide | P | MS | Leu | Thr | Ala | Glu | Ile | Leu | Glu | Leu | Melzer et al., 2012 | ||
| Histone H2A type 2-A | Q6GSS7 | 2-130 | peptide-Leu64+Glu-peptide | P | MS | Ala | Glu | Ile | Leu | Glu | Leu | Ala | Gly | Melzer et al., 2012 | ||
| Histone H2A type 2-B | Q64522 | 2-130 | peptide-Leu59+Thr-peptide | P | MS | Leu | Glu | Tyr | Leu | Thr | Ala | Glu | Ile | Melzer et al., 2012 | ||
| Histone H2A type 2-B | Q64522 | 2-130 | peptide-Ala61+Glu-peptide | P | MS | Tyr | Leu | Thr | Ala | Glu | Ile | Leu | Glu | Melzer et al., 2012 | ||
| Histone H2A type 2-B | Q64522 | 2-130 | peptide-Glu62+Ile-peptide | P | MS | Leu | Thr | Ala | Glu | Ile | Leu | Glu | Leu | Melzer et al., 2012 | ||
| Histone H2A type 2-B | Q64522 | 2-130 | peptide-Leu64+Glu-peptide | P | MS | Ala | Glu | Ile | Leu | Glu | Leu | Ala | Gly | Melzer et al., 2012 | ||
| Histone H2A type 2-C | Q64523 | 2-129 | peptide-Leu59+Thr-peptide | P | MS | Leu | Glu | Tyr | Leu | Thr | Ala | Glu | Ile | Melzer et al., 2012 | ||
| Histone H2A type 2-C | Q64523 | 2-129 | peptide-Ala61+Glu-peptide | P | MS | Tyr | Leu | Thr | Ala | Glu | Ile | Leu | Glu | Melzer et al., 2012 | ||
| Histone H2A type 2-C | Q64523 | 2-129 | peptide-Glu62+Ile-peptide | P | MS | Leu | Thr | Ala | Glu | Ile | Leu | Glu | Leu | Melzer et al., 2012 | ||
| Histone H2A type 2-C | Q64523 | 2-129 | peptide-Leu64+Glu-peptide | P | MS | Ala | Glu | Ile | Leu | Glu | Leu | Ala | Gly | Melzer et al., 2012 | ||
| Histone H2A type 3 | Q8BFU2 | 2-130 | peptide-Leu59+Thr-peptide | P | MS | Leu | Glu | Tyr | Leu | Thr | Ala | Glu | Ile | Melzer et al., 2012 | ||
| Histone H2A type 3 | Q8BFU2 | 2-130 | peptide-Ala61+Glu-peptide | P | MS | Tyr | Leu | Thr | Ala | Glu | Ile | Leu | Glu | Melzer et al., 2012 | ||
| Histone H2A type 3 | Q8BFU2 | 2-130 | peptide-Glu62+Ile-peptide | P | MS | Leu | Thr | Ala | Glu | Ile | Leu | Glu | Leu | Melzer et al., 2012 | ||
| Histone H2A type 3 | Q8BFU2 | 2-130 | peptide-Leu64+Glu-peptide | P | MS | Ala | Glu | Ile | Leu | Glu | Leu | Ala | Gly | Melzer et al., 2012 | ||
| Histone H2A.J | Q8R1M2 | 1-129 | peptide-Leu59+Thr-peptide | P | MS | Leu | Glu | Tyr | Leu | Thr | Ala | Glu | Ile | Melzer et al., 2012 | ||
| Histone H2A.J | Q8R1M2 | 1-129 | peptide-Ala61+Glu-peptide | P | MS | Tyr | Leu | Thr | Ala | Glu | Ile | Leu | Glu | Melzer et al., 2012 | ||
| Histone H2A.J | Q8R1M2 | 1-129 | peptide-Glu62+Ile-peptide | P | MS | Leu | Thr | Ala | Glu | Ile | Leu | Glu | Leu | Melzer et al., 2012 | ||
| Histone H2A.J | Q8R1M2 | 1-129 | peptide-Leu64+Glu-peptide | P | MS | Ala | Glu | Ile | Leu | Glu | Leu | Ala | Gly | Melzer et al., 2012 | ||
| Histone H2A.V | Q3THW5 | 2-128 | peptide-Glu65+Val-peptide | P | MS | Leu | Thr | Ala | Glu | Val | Leu | Glu | Leu | Impens et al., 2010 | ||
| Histone H2A.V | Q3THW5 | 1-128 | peptide-Leu67+Glu-peptide | P | MS | Ala | Glu | Val | Leu | Glu | Leu | Ala | Gly | Melzer et al., 2012 | ||
| Histone H2A.V | Q3THW5 | 1-128 | peptide-Leu69+Ala-peptide | P | MS | Val | Leu | Glu | Leu | Ala | Gly | Asn | Ala | Melzer et al., 2012 | ||
| Histone H2A.x | P27661 | 2-143 | peptide-Leu59+Thr-peptide | P | MS | Leu | Glu | Tyr | Leu | Thr | Ala | Glu | Ile | Melzer et al., 2012 | ||
| Histone H2A.x | P27661 | 2-143 | peptide-Ala61+Glu-peptide | P | MS | Tyr | Leu | Thr | Ala | Glu | Ile | Leu | Glu | Melzer et al., 2012 | ||
| Histone H2A.x | P27661 | 2-143 | peptide-Glu62+Ile-peptide | P | MS | Leu | Thr | Ala | Glu | Ile | Leu | Glu | Leu | Melzer et al., 2012 | ||
| Histone H2A.x | P27661 | 2-143 | peptide-Leu64+Glu-peptide | P | MS | Ala | Glu | Ile | Leu | Glu | Leu | Ala | Gly | Melzer et al., 2012 | ||
| Histone H2A.Z | P0C0S6 | 2-128 | peptide-Leu69+Ala-peptide | P | MS | Val | Leu | Glu | Leu | Ala | Gly | Asn | Ala | Impens et al., 2010 | ||
| Histone H2A.Z | P0C0S6 | 2-128 | peptide-Leu67+Glu-peptide | P | MS | Ala | Glu | Val | Leu | Glu | Leu | Ala | Gly | Impens et al., 2010 | ||
| Histone H2A.Z | P0C0S6 | 2-128 | peptide-Glu65+Val-peptide | P | MS | Leu | Thr | Ala | Glu | Val | Leu | Glu | Leu | Melzer et al., 2012 | ||
| Histone H3.1 | P68433 | 2-136 | peptide-Leu104+Phe-peptide | P | MS | Leu | Val | Gly | Leu | Phe | Glu | Asp | Thr | Impens et al., 2010 | ||
| Histone H3.2 | P84228 | 2-136 | peptide-Leu104+Phe-peptide | P | MS | Leu | Val | Gly | Leu | Phe | Glu | Asp | Thr | Melzer et al., 2012 | ||
| Histone H3.3 | P84244 | 2-136 | peptide-Leu104+Phe-peptide | P | MS | Leu | Val | Gly | Leu | Phe | Glu | Asp | Thr | Melzer et al., 2012 | ||
| Histone H3.3C | P02301 | 2-136 | peptide-Leu104+Phe-peptide | P | MS | Leu | Val | Gly | Leu | Phe | Glu | Asp | Thr | Melzer et al., 2012 | ||
| Histone H4 | P62806 | 2-103 | peptide-Leu59+Lys-peptide | P | MS | Arg | Gly | Val | Leu | Lys | Val | Phe | Leu | Impens et al., 2010 | ||
| HLA class II histocompatibility antigen gamma chain | P04233-1 | peptide-Leu190+Phe-peptide | N | - | His | Trp | Leu | Leu | Phe | Glu | Met | Ser | Kageyama et al., 1996 | |||
| Hsc70-interacting protein | Q99L47 | 1-371 | peptide-Phe157+Val-peptide | P | MS | Ala | Ser | Val | Phe | Val | Lys | Leu | Gln | Impens et al., 2010 | ||
| Hsc70-interacting protein | Q99L47 | 1-371 | peptide-Asp211+Tyr-peptide | P | MS | Cys | Lys | Leu | Asp | Tyr | Asp | Glu | Asp | Impens et al., 2010 | ||
| Hyaluronan and proteoglycan link protein 1 | P10915 | 16-354 | Peptide-Leu41+Val-Peptide | N | NT | Pro | His | Leu | Leu | Val | Glu | Ala | Glu | Nguyen et al., 1991 | ||
| Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial | Q61425 | 13-314 | peptide-Leu55+Val-peptide | P | MS | Thr | Val | Val | Leu | Val | Asp | Gln | Thr | Impens et al., 2010 | ||
| Inner centromere protein | Q9WU62 | 1-880 | peptide-Ser508+Phe-peptide | P | MS | Pro | Lys | Cys | Ser | Phe | Val | Glu | Lys | Melzer et al., 2012 | ||
| insulin B-chain (oxidized) | P01317 | 25-54 | Phe-Val-Asn-Gln-His-Leu-Cya-Gly-Ser-His-Leu-Val-Glu-Ala-Leu+Tyr-Leu-Val-Cya-Gly-Glu-Arg-Gly-Phe-Phe-Tyr-Thr-Pro-Lys-Ala | N | Val | Glu | Ala | Leu | Tyr | Leu | Val | Cya | Matsuzaki & Takahashi, 1988 | |||
| insulin B-chain (oxidized) | P01317 | 25-54 | Phe-Val-Asn-Gln-His-Leu-Cya-Gly-Ser-His-Leu-Val-Glu-Ala-Leu-Tyr-Leu-Val-Cya-Gly-Glu-Arg-Gly-Phe+Phe-Tyr-Thr-Pro-Lys-Ala | N | Glu | Arg | Gly | Phe | Phe | Tyr | Thr | Pro | Authier et al., 2002 | 3127 | ||
| insulin B-chain (oxidized) | P01317 | 25-54 | Phe-Val-Asn-Gln-His-Leu-Cya-Gly-Ser-His-Leu-Val-Glu-Ala-Leu-Tyr-Leu+Val-Cya-Gly-Glu-Arg-Gly-Phe-Phe-Tyr-Thr-Pro-Lys-Ala | N | Ala | Leu | Tyr | Leu | Val | Cya | Gly | Glu | Matsuzaki & Takahashi, 1988 | |||
| insulin-like growth factor binding protein 3 | P17936 | 28-291 | peptide-Ala125+Tyr-peptide | P | Arg | Leu | Arg | Ala | Tyr | Leu | Leu | Pro | Claussen et al., 1997 | 26831 | ||
| insulin-like growth factor binding protein 3 | P17936 | 28-291 | peptide-Tyr186+Lys-peptide | P | Ser | Gln | Arg | Tyr | Lys | Val | Asp | Tyr | Claussen et al., 1997 | 26828 | ||
| insulin-like growth factor binding protein 3 | P17936 | 28-291 | peptide-Tyr190+Glu-peptide | P | Lys | Val | Asp | Tyr | Glu | Ser | Gln | Ser | Claussen et al., 1997 | 26829 | ||
| insulin-like growth factor binding protein 3 | P17936 | 28-291 | peptide-Leu227+Asn-peptide | P | Leu | Lys | Phe | Leu | Asn | Val | Leu | Ser | Claussen et al., 1997 | 26830 | ||
| insulin-like growth factor binding protein 4 precursor | P22692 | 22-258 | peptide-Lys155+Met-peptide | P | Ser | Gly | Gly | Lys | Met | Lys | Val | Asn | Claussen et al., 1997 | 26823 | ||
| Interferon regulatory factor 2-binding protein 2 | E9Q1P8 | 1-570 | peptide-Thr556+Ile-peptide | P | MS | Glu | Ile | Ala | Thr | Ile | Leu | Ala | Gly | Melzer et al., 2012 | ||
| Interferon regulatory factor 2-binding protein 2 | E9Q1P8 | 1-570 | peptide-Leu558+Ala-peptide | P | MS | Ala | Thr | Ile | Leu | Ala | Gly | Asp | Val | Melzer et al., 2012 | ||
| Interferon-induced guanylate-binding protein 2 | Q9Z0E6 | 1-586 | peptide-Leu473+Leu-peptide | P | MS | Val | Glu | Thr | Leu | Leu | Gln | Thr | Asp | Impens et al., 2010 | ||
| Isocitrate dehydrogenase [NADP] cytoplasmic | O88844 | 1-414 | peptide-Leu37+Asp-peptide | P | MS | Tyr | Val | Glu | Leu | Asp | Leu | His | Ser | Impens et al., 2010 | ||
| Isocitrate dehydrogenase [NADP] cytoplasmic | O88844 | 1-414 | peptide-Leu295+Ile-peptide | P | MS | Thr | Ser | Val | Leu | Ile | Cys | Pro | Asp | Impens et al., 2010 | ||
| IST1 homolog | Q9CX00 | 1-362 | peptide-Leu195+Ile-peptide | P | MS | Glu | Thr | Asp | Leu | Ile | Asp | Val | Gly | Impens et al., 2010 | ||
| kallistatin precursor | P29622 | 21-427 | peptide-Phe387+Phe-peptide | P | Ala | Ile | Lys | Phe | Phe | Ser | Ala | Gln | Pimenta et al., 2000 | |||
| kallistatin precursor | P29622 | 21-427 | peptide-Phe388+Ser-peptide | P | Ile | Lys | Phe | Phe | Ser | Ala | Gln | Thr | Pimenta et al., 2000 | |||
| kallistatin precursor | P29622 | 21-427 | peptide-Leu404+Val-peptide | P | Arg | Pro | Phe | Leu | Val | Val | Ile | Phe | Pimenta et al., 2000 | |||
| kassinin | P08611 | 1-12 | peptide-Phe8+Val-peptide | N | Ser | Asp | Gln | Phe | Val | Gly | Leu | Met | Kageyama et al., 1995 | 26575 | ||
| kininogen-1 | P01042 | 19-644 | peptide-Leu289+Asn-peptide | P | Ile | Thr | Lys | Leu | Asn | Ala | Glu | Asn | Lenarcic et al., 1991 | |||
| kininogen-1 | P01042 | 19-644 | peptide-Lys316+Tyr-peptide | P | Ala | Gly | Lys | Lys | Tyr | Phe | Ile | Asp | Lenarcic et al., 1991 | |||
| kininogen-1 | P01042 | 19-644 | peptide-Phe321+Val-peptide | P | Phe | Ile | Asp | Phe | Val | Ala | Arg | Glu | Lenarcic et al., 1991 | |||
| L-lactate dehydrogenase A chain | P06151 | 2-332 | peptide-Leu259+Ala-peptide | P | MS | Val | Ala | Asp | Leu | Ala | Glu | Ser | Ile | Impens et al., 2010 | ||
| L-lactate dehydrogenase A chain | P06151 | 2-332 | peptide-Leu254+Ser-peptide | P | MS | Ala | Ile | Gly | Leu | Ser | Val | Ala | Asp | Impens et al., 2010 | ||
| Legumain | O89017 | 18-325 | peptide-Tyr207+Ala-peptide | P | MS | Ile | Asn | Val | Tyr | Ala | Thr | Thr | Ala | Impens et al., 2010 | ||
| Leucine-rich repeat flightless-interacting protein 1 | Q3UZ39 | 1-729 | peptide-Leu146+Glu-peptide | P | MS | Leu | Leu | Glu | Leu | Glu | Glu | Gln | Leu | Impens et al., 2010 | ||
| Leukocyte elastase inhibitor A | Q9D154 | 1-379 | peptide-Leu296+Phe-peptide | P | MS | Val | Gln | Asp | Leu | Phe | Ser | Ser | Ser | Melzer et al., 2012 | ||
| Leukocyte elastase inhibitor C | Q5SV42 | 1-375 | peptide-Leu293+Phe-peptide | P | MS | Val | Gln | Asp | Leu | Phe | Ser | Ser | Ser | Impens et al., 2010 | ||
| Lipoma-preferred partner homolog | Q8BFW7 | 1-613 | peptide-Phe99+Lys-peptide | P | MS | Glu | Gly | Ala | Phe | Lys | Val | Gln | Gln | Impens et al., 2010 | ||
| listeriolysin O | P13128 | 26-529 | peptide-Trp491+Trp-peptide | P | NT | Ala | Trp | Glu | Trp | Trp | Arg | Thr | Val | Carrasco-Marin et al., 2009 | ||
| Low molecular weight phosphotyrosine protein phosphatase | Q9D358 | 2-158 | peptide-Leu90+Cys-peptide | P | MS | Asp | Tyr | Ile | Leu | Cys | Met | Asp | Glu | Impens et al., 2010 | ||
| Lupus La protein homolog | P32067 | 1-415 | peptide-Tyr188+Phe-peptide | P | MS | Lys | Glu | Asp | Tyr | Phe | Ala | Lys | Lys | Impens et al., 2010 | ||
| Lys-Pro-Arg-Arg-Pro-Tyr-Ile-Leu-Lys-Arg-Gly-Ser-Tyr-Tyr-Tyr | Lys-Pro-Arg-Arg-Pro-Tyr-Ile-Leu+Lys-Arg-Gly-Ser-Tyr-Tyr-Tyr | N | Pro | Tyr | Ile | Leu | Lys | Arg | Gly | Ser | Dunn, 2004 | |||||
| Lys-Pro-Ile-Glu-Phe-Nph-Arg-Leu | Lys-Pro-Ile-Glu-Phe+Nph-Arg-Leu | S | Pro | Ile | Glu | Phe | Nph | Arg | Leu | - | Oda et al., 1992 | |||||
| Lysosomal alpha-mannosidase | O09159 | 50-1013 | peptide-Tyr951+Leu-peptide | P | MS | Thr | Ile | Asn | Tyr | Leu | Gln | Glu | Thr | Impens et al., 2010 | ||
| Lysosomal alpha-mannosidase | O09159 | 50-1013 | peptide-Phe947+Thr-peptide | P | MS | Phe | Gln | Thr | Phe | Thr | Ile | Asn | Tyr | Impens et al., 2010 | ||
| Lysosomal alpha-mannosidase | O09159 | 50-1013 | peptide-Asn950+Tyr-peptide | P | MS | Phe | Thr | Ile | Asn | Tyr | Leu | Gln | Glu | Impens et al., 2010 | ||
| Lysosomal protective protein | P16675 | 24-474 | peptide-Trp404+Phe-peptide | P | MS | Gly | Asp | Glu | Trp | Phe | Val | Asp | Ser | Impens et al., 2010 | ||
| Lysosomal protective protein | P16675 | 24-474 | peptide-Leu409+Asn-peptide | P | MS | Val | Asp | Ser | Leu | Asn | Gln | Lys | Met | Impens et al., 2010 | ||
| Macrophage migration inhibitory factor | P34884 | 2-115 | peptide-Met3+Phe-peptide | P | MS | - | - | - | Met | Phe | Ile | Val | Asn | Impens et al., 2010 | ||
| Macrophage migration inhibitory factor | P34884 | 2-115 | peptide-Phe4+Ile-peptide | P | MS | - | - | Met | Phe | Ile | Val | Asn | Thr | Impens et al., 2010 | ||
| Macrophage-capping protein | P24452 | 1-352 | peptide-Leu141+Tyr-peptide | P | MS | Ile | Arg | Lys | Leu | Tyr | Gln | Val | Lys | Impens et al., 2010 | ||
| Major vault protein | Q9EQK5 | 2-861 | peptide-Met714+Ala-peptide | P | MS | Ala | Met | Ser | Met | Ala | Val | Glu | Ser | Impens et al., 2010 | ||
| Malate dehydrogenase, cytoplasmic | P14152 | 2-334 | peptide-Leu81+Asp-peptide | P | MS | Phe | Lys | Asp | Leu | Asp | Val | Ala | Val | Impens et al., 2010 | ||
| Malate dehydrogenase, cytoplasmic | P14152 | 2-334 | peptide-Phe223+Ile-peptide | P | MS | Lys | Gly | Glu | Phe | Ile | Thr | Thr | Val | Impens et al., 2010 | ||
| Malate dehydrogenase, mitochondrial | P08249 | 25-338 | peptide-Leu42+Leu-peptide | P | MS | Pro | Leu | Ser | Leu | Leu | Leu | Lys | Asn | Impens et al., 2010 | ||
| Malate dehydrogenase, mitochondrial | P08249 | 25-338 | peptide-Asp94+Val-peptide | P | MS | Lys | Gly | Cys | Asp | Val | Val | Val | Ile | Impens et al., 2010 | ||
| Mca-Gly-Lys-Pro-Ile-Ile-Phe-Phe-Arg-Leu-Lys(Dnp)-NH2 | Mca-Gly-Lys-Pro-Ile-Ile-Phe+Phe-Arg-Leu-Lys(Dnp)-NH2 | S | Pro | Ile | Ile | Phe | Phe | Arg | Leu | Lyd | Yasuda et al., 1999 | |||||
| Mca-Gly-Lys-Pro-Ile-Leu-Phe-Phe-Arg-Leu-Lys(Dnp)-D-Arg-NH2 | Mca-Gly-Lys-Pro-Ile-Leu-Phe+Phe-Arg-Leu-Lys(Dnp)-D-Arg-NH2 | S | Pro | Ile | Leu | Phe | Phe | Arg | Leu | Lyd | Zaidi et al., 2007 | |||||
| Mca-Gly-Lys-Pro-Ile-Leu-Phe-Phe-Arg-Leu-Lys(Dnp)-NH2 | Mca-Gly-Lys-Pro-Ile-Leu-Phe+Phe-Arg-Leu-Lys(Dnp)-NH2 | S | Pro | Ile | Leu | Phe | Phe | Arg | Leu | Lyd | Yasuda et al., 1999 | |||||
| Metastasis-associated protein MTA2 | Q9R190 | 1-668 | peptide-Leu524+Val-peptide | P | MS | Val | Lys | Asp | Leu | Val | Ala | Gln | Ala | Impens et al., 2010 | ||
| Microtubule-associated protein 4 | P27546 | 2-1125 | peptide-Leu622+Glu-peptide | P | MS | Leu | Glu | Asn | Leu | Glu | Gln | Lys | Glu | Impens et al., 2010 | ||
| Microtubule-associated protein 4 | P27546 | 2-1125 | peptide-Leu153+Phe-peptide | P | MS | Ala | Asp | Leu | Leu | Phe | Val | Ser | Ser | Impens et al., 2010 | ||
| Mitochondrial fission 1 protein | Q9CQ92 | 1-152 | peptide-Leu8+Val-peptide | P | MS | Leu | Asn | Glu | Leu | Val | Ser | Val | Glu | Impens et al., 2010 | ||
| Mitochondrial import inner membrane translocase subunit Tim13 | P62075 | 1-95 | peptide-Gln29+Ile-peptide | P | MS | Val | Lys | Val | Gln | Ile | Ala | Val | Ala | Impens et al., 2010 | ||
| Mitochondrial import inner membrane translocase subunit Tim8 A | Q9WVA2 | 1-97 | peptide-Phe22+Ile-peptide | P | MS | Leu | Gln | His | Phe | Ile | Glu | Val | Glu | Impens et al., 2010 | ||
| Moesin | P26041 | 2-577 | peptide-Trp58+Leu-peptide | P | MS | Phe | Ser | Thr | Trp | Leu | Lys | Leu | Asn | Impens et al., 2010 | ||
| morpholinecarbonyl-Leu-Gln-NHMec | morpholinecarbonyl-Leu-Gln+NHMec | S | - | Moc | Leu | Gln | AMC | - | - | - | Denmeade et al., 1997 | |||||
| Mps one binder kinase activator-like 1B | Q921Y0 | 2-216 | peptide-Leu207+Ile-peptide | P | MS | Leu | Gln | Glu | Leu | Ile | Glu | Lys | Leu | Impens et al., 2010 | ||
| Multifunctional protein ADE2 | Q9DCL9 | 2-425 | peptide-Trp410+Ile-peptide | P | MS | Leu | Asn | Thr | Trp | Ile | Ser | Leu | Lys | Impens et al., 2010 | ||
| myelin basic protein | P02687 | 1-169 | peptide-Leu37+Asp-peptide | P | Thr | Gly | Ile | Leu | Asp | Ser | Leu | Gly | Whitaker & Seyer, 1979 | 26551 | ||
| myelin basic protein | P02687 | 1-169 | peptide-Phe115+Phe-peptide | P | Val | Val | His | Phe | Phe | Lys | Asn | Ile | Whitaker & Seyer, 1979 | 26548 | ||
| myelin basic protein | P02687 | 1-169 | peptide-Asn91+Ile-peptide | P | Phe | Phe | Lys | Asn | Ile | Val | Thr | Pro | Whitaker & Seyer, 1979 | 26549 | ||
| myelin basic protein | P02687 | 1-169 | peptide-Phe43+Phe-peptide | P | Leu | Gly | Arg | Phe | Phe | Gly | Ser | Asp | Whitaker & Seyer, 1979 | 26550 | ||
| myelin basic protein isoform 1 | P02686 | 135-304 | peptide-Phe45+Phe-peptide | P | MS | Ile | Gly | Arg | Phe | Phe | Gly | Gly | Asp | Beck et al., 2001 | 26719 | |
| myelin basic protein isoform 1 | P02686 | 135-304 | peptide-Phe116+Phe-peptide | P | MS | Val | Val | His | Phe | Phe | Lys | Asn | Ile | Beck et al., 2001 | 26725 | |
| myoglobin | P68082 | 2-153 | peptide-Leu30+Ile-peptide | P | NT | Gln | Glu | Val | Leu | Ile | Arg | Leu | Phe | Beck et al., 2001 | ||
| myoglobin | P68082 | 2-153 | peptide-Leu70+Thr-peptide | P | NT | Thr | Val | Val | Leu | Thr | Ala | Leu | Gly | Beck et al., 2001 | ||
| myoglobin | P68082 | 2-153 | peptide-Leu33+Phe-peptide | P | NT | Leu | Ile | Arg | Leu | Phe | Thr | Gly | His | Beck et al., 2001 | ||
| myoglobin | P68082 | 2-153 | peptide-Leu73+Gly-peptide | P | NT | Leu | Thr | Ala | Leu | Gly | Gly | Ile | Leu | Beck et al., 2001 | ||
| Myosin regulatory light chain 12B | Q3THE2 | 2-172 | peptide-Glu33+Phe-peptide | P | MS | Gln | Ile | Gln | Glu | Phe | Lys | Glu | Ala | Impens et al., 2010 | ||
| Myosin regulatory light polypeptide 9 | Q9CQ19 | 2-172 | peptide-Glu33+Phe-peptide | P | MS | Gln | Ile | Gln | Glu | Phe | Lys | Glu | Ala | Melzer et al., 2012 | ||
| Myosin-10 | Q61879 | 1-1976 | peptide-Ser227+Phe-peptide | P | MS | Ile | Leu | Glu | Ser | Phe | Gly | Asn | Ala | Melzer et al., 2012 | ||
| Myosin-11 | O08638 | 1-1972 | peptide-Ala227+Phe-peptide | P | MS | Ile | Leu | Glu | Ala | Phe | Gly | Asn | Ala | Impens et al., 2010 | ||
| Myosin-11 | O08638 | 1-1972 | peptide-Leu225+Glu-peptide | P | MS | Asn | Pro | Ile | Leu | Glu | Ala | Phe | Gly | Melzer et al., 2012 | ||
| Myosin-14 | Q6URW6 | 2-2000 | peptide-Leu249+Glu-peptide | P | MS | Asn | Pro | Ile | Leu | Glu | Ala | Phe | Gly | Melzer et al., 2012 | ||
| Myosin-14 | Q6URW6 | 2-2000 | peptide-Ala251+Phe-peptide | P | MS | Ile | Leu | Glu | Ala | Phe | Gly | Asn | Ala | Melzer et al., 2012 | ||
| Myosin-9 | Q8VDD5 | 2-1960 | peptide-Leu218+Glu-peptide | P | MS | Asn | Pro | Ile | Leu | Glu | Ala | Phe | Gly | Impens et al., 2010 | ||
| Myosin-9 | Q8VDD5 | 2-1960 | peptide-Ala220+Phe-peptide | P | MS | Ile | Leu | Glu | Ala | Phe | Gly | Asn | Ala | Melzer et al., 2012 | ||
| Myotrophin | P62774 | 2-118 | peptide-Trp8+Ala-peptide | P | MS | Glu | Phe | Met | Trp | Ala | Leu | Lys | Asn | Impens et al., 2010 | ||
| Myotrophin | P62774 | 2-118 | peptide-Glu17+Val-peptide | P | MS | Asp | Leu | Asp | Glu | Val | Lys | Asp | Tyr | Impens et al., 2010 | ||
| Myotrophin | P62774 | 2-118 | peptide-Asp20+Tyr-peptide | P | MS | Glu | Val | Lys | Asp | Tyr | Val | Ala | Lys | Impens et al., 2010 | ||
| N-acetylglucosamine-6-sulfatase | Q8BFR4 | 36-544 | peptide-Leu499+Met-peptide | P | MS | Asn | Tyr | Arg | Leu | Met | Met | Leu | Gln | Impens et al., 2010 | ||
| Na(+)/H(+) exchange regulatory cofactor NHE-RF1 | P70441 | 2-355 | peptide-Leu320+Asn-peptide | P | MS | Ile | Leu | Asp | Leu | Asn | Ile | Ser | Leu | Impens et al., 2010 | ||
| Nascent polypeptide-associated complex subunit alpha | Q60817 | 1-215 | peptide-Glu182+Leu-peptide | P | MS | Lys | Asp | Ile | Glu | Leu | Val | Met | Ser | Melzer et al., 2012 | ||
| Nascent polypeptide-associated complex subunit alpha | Q60817 | 1-215 | peptide-Leu183+Val-peptide | P | MS | Asp | Ile | Glu | Leu | Val | Met | Ser | Gln | Melzer et al., 2012 | ||
| Nascent polypeptide-associated complex subunit alpha, muscle-specific form | P70670 | 1-2187 | peptide-Glu2154+Leu-peptide | P | MS | Lys | Asp | Ile | Glu | Leu | Val | Met | Ser | Impens et al., 2010 | ||
| Nascent polypeptide-associated complex subunit alpha, muscle-specific form | P70670 | 1-2187 | peptide-Leu2155+Val-peptide | P | MS | Asp | Ile | Glu | Leu | Val | Met | Ser | Gln | Impens et al., 2010 | ||
| Nck-associated protein 5-like | Q6GQX2 | 1-1323 | peptide-Lys767+Val-peptide | P | MS | Cys | Leu | Thr | Lys | Val | Glu | Leu | Ala | Melzer et al., 2012 | ||
| neurokinin A | P20366 | 98-107 | peptide-Phe103+Val-peptide | N | Thr | Asp | Ser | Phe | Val | Gly | Leu | Met | Kageyama et al., 1995 | 26571 | ||
| NHL repeat-containing protein 2 | Q8BZW8 | 1-725 | peptide-Leu426+Phe-peptide | P | MS | Trp | Ser | Cys | Leu | Phe | Val | Ala | Asp | Impens et al., 2010 | ||
| Niban-like protein 1 | Q8R1F1 | 1-749 | peptide-Phe421+Asp-peptide | P | MS | Gln | Gln | Arg | Phe | Asp | Val | Ser | Ser | Impens et al., 2010 | ||
| NSFL1 cofactor p47 | Q9CZ44 | 1-370 | peptide-Leu288+Ile-peptide | P | MS | Ser | Ser | Ile | Leu | Ile | Asn | Glu | Ala | Impens et al., 2010 | ||
| Nuclear autoantigenic sperm protein | Q99MD9 | 2-773 | peptide-Leu660+Val-peptide | P | MS | Lys | Ala | Thr | Leu | Val | Glu | Ser | Ser | Impens et al., 2010 | ||
| Nuclear pore complex protein Nup50 | Q9JIH2 | 1-466 | peptide-Phe27+Ser-peptide | P | MS | Met | Gly | Thr | Phe | Ser | Val | Ala | Ser | Impens et al., 2010 | ||
| Nuclease-sensitive element-binding protein 1 | P62960 | 2-322 | peptide-Phe109+Asp-peptide | P | MS | Thr | Val | Glu | Phe | Asp | Val | Val | Glu | Impens et al., 2010 | ||
| Nucleophosmin | Q61937 | 1-292 | peptide-Phe180+Asp-peptide | P | MS | Asp | Asp | Asp | Phe | Asp | Glu | Glu | Glu | Impens et al., 2010 | ||
| Nucleophosmin | Q61937 | 1-292 | peptide-Asp132+Val-peptide | P | MS | Asp | Glu | Glu | Asp | Val | Lys | Leu | Leu | Impens et al., 2010 | ||
| Nucleoside diphosphate kinase A | P15532 | 1-152 | peptide-Trp78+Glu-peptide | P | MS | Ala | Met | Val | Trp | Glu | Gly | Leu | Asn | Impens et al., 2010 | ||
| Nucleoside diphosphate kinase A | P15532 | 1-152 | peptide-Leu91+Gly-peptide | P | MS | Arg | Val | Met | Leu | Gly | Glu | Thr | Asn | Impens et al., 2010 | ||
| Nucleoside diphosphate kinase A | P15532 | 1-152 | peptide-Phe8+Ile-peptide | P | MS | Glu | Arg | Thr | Phe | Ile | Ala | Ile | Lys | Impens et al., 2010 | ||
| Nucleoside diphosphate kinase B | Q01768 | 1-152 | peptide-Phe8+Ile-peptide | P | MS | Glu | Arg | Thr | Phe | Ile | Ala | Ile | Lys | Melzer et al., 2012 | ||
| Nucleoside diphosphate kinase B | Q01768 | 1-152 | peptide-Trp78+Glu-peptide | P | MS | Ala | Met | Val | Trp | Glu | Gly | Leu | Asn | Melzer et al., 2012 | ||
| Nucleoside diphosphate kinase B | Q01768 | 1-152 | peptide-Leu91+Gly-peptide | P | MS | Arg | Val | Met | Leu | Gly | Glu | Thr | Asn | Melzer et al., 2012 | ||
| Obinutuzumab heavy chain | 1-449 | peptide-Cys222+Asp- peptide | P | Pro | Lys | Ser | Cys | Asp | Lys | Thr | His | Caval et al., 2021 | ||||
| Obinutuzumab heavy chain | 1-449 | peptide-Asp223+Lys- peptide | P | Lys | Ser | Cys | Asp | Lys | Thr | His | Thr | Caval et al., 2021 | ||||
| Obinutuzumab heavy chain | 1-449 | peptide-Lys224+Thr- peptide | P | Ser | Cys | Asp | Lys | Thr | His | Thr | Cys | Caval et al., 2021 | ||||
| Obinutuzumab heavy chain | 1-449 | peptide-His226+Thr- peptide | P | Asp | Lys | Thr | His | Thr | Cys | Pro | Pro | Caval et al., 2021 | ||||
| Obinutuzumab heavy chain | 1-449 | peptide-Val242+Phe- peptide | P | Gly | Pro | Ser | Val | Phe | Leu | Phe | Pro | Caval et al., 2021 | ||||
| Obinutuzumab heavy chain | 1-449 | peptide-Phe243+Leu- peptide | P | Pro | Ser | Val | Phe | Leu | Phe | Pro | Pro | Caval et al., 2021 | ||||
| osteocalcin | P02818 | 52-100 | peptide-Ala92+Tyr-peptide | P | Phe | Gln | Glu | Ala | Tyr | Arg | Arg | Phe | Baumgrass et al., 1997 | 3138 | ||
| Osteoclast-stimulating factor 1 | Q62422 | 1-215 | peptide-Leu158+Leu-peptide | P | MS | Ile | Val | Gln | Leu | Leu | Leu | Ala | Lys | Impens et al., 2010 | ||
| Osteoclast-stimulating factor 1 | Q62422 | 1-215 | peptide-Tyr65+Val-peptide | P | MS | Pro | Ser | Asn | Tyr | Val | Ala | Glu | Gln | Impens et al., 2010 | ||
| osteopontin | P10451 | 17-314 | peptide-Leu167+Arg-peptide | P | NT | Val | Tyr | Gly | Leu | Arg | Ser | Lys | Ser | Christensen et al., 2010 | ||
| osteopontin | P10451 | 17-314 | peptide-Thr42+Trp-peptide | N | NT | Ala | Val | Ala | Thr | Trp | Leu | Asn | Pro | Christensen et al., 2010 | ||
| osteopontin | P10451 | 17-314 | peptide-Leu54+Leu-peptide | P | NT | Lys | Gln | Asn | Leu | Leu | Ala | Pro | Gln | Christensen et al., 2010 | ||
| Oxysterol-binding protein-related protein 9 | A2A8Z1 | 2-736 | peptide-Trp721+Val-peptide | P | MS | Gly | Glu | Cys | Trp | Val | Tyr | Asp | Glu | Impens et al., 2010 | ||
| Peptidyl-prolyl cis-trans isomerase A | P17742 | 2-164 | peptide-Phe25+Ala-peptide | P | MS | Phe | Glu | Leu | Phe | Ala | Asp | Lys | Val | Impens et al., 2010 | ||
| Peptidyl-prolyl cis-trans isomerase A | P17742 | 2-164 | peptide-Phe8+Asp-peptide | P | MS | Thr | Val | Phe | Phe | Asp | Ile | Thr | Ala | Impens et al., 2010 | ||
| Peptidyl-prolyl cis-trans isomerase A | P17742 | 2-164 | peptide-Ala26+Asp-peptide | P | MS | Glu | Leu | Phe | Ala | Asp | Lys | Val | Pro | Impens et al., 2010 | ||
| Peptidyl-prolyl cis-trans isomerase A | P17742 | 2-164 | peptide-Phe22+Glu-peptide | P | MS | Arg | Val | Ser | Phe | Glu | Leu | Phe | Ala | Impens et al., 2010 | ||
| Peptidyl-prolyl cis-trans isomerase A | P17742 | 2-164 | peptide-Leu24+Phe-peptide | P | MS | Ser | Phe | Glu | Leu | Phe | Ala | Asp | Lys | Impens et al., 2010 | ||
| Peptidyl-prolyl cis-trans isomerase A | P17742 | 2-164 | peptide-Phe7+Phe-peptide | P | MS | Pro | Thr | Val | Phe | Phe | Asp | Ile | Thr | Impens et al., 2010 | ||
| Peptidyl-prolyl cis-trans isomerase A | P17742 | 2-164 | peptide-Phe60+Met-peptide | P | MS | Ile | Pro | Gly | Phe | Met | Cys | Gln | Gly | Impens et al., 2010 | ||
| Peptidyl-prolyl cis-trans isomerase B | P24369 | 34-216 | peptide-Asp49+Leu-peptide | P | MS | Val | Tyr | Phe | Asp | Leu | Gln | Ile | Gly | Impens et al., 2010 | ||
| Peptidyl-prolyl cis-trans isomerase B | P24369 | 34-216 | peptide-Phe100+Met-peptide | P | MS | Ile | Lys | Asp | Phe | Met | Ile | Gln | Gly | Impens et al., 2010 | ||
| Peptidyl-prolyl cis-trans isomerase D | Q9CR16 | 2-370 | peptide-Leu36+Phe-peptide | P | MS | Val | Leu | Glu | Leu | Phe | Ala | Asp | Ile | Impens et al., 2010 | ||
| Peptidyl-prolyl cis-trans isomerase FKBP3 | Q62446 | 2-224 | peptide-Leu179+Leu-peptide | P | MS | Asp | Glu | Ala | Leu | Leu | Thr | Met | Ser | Impens et al., 2010 | ||
| Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 | Q9QUR7 | 1-165 | peptide-Leu108+Ala-peptide | P | MS | Phe | Glu | Ser | Leu | Ala | Ser | Gln | Phe | Impens et al., 2010 | ||
| Perilipin-3 | Q9DBG5 | 1-437 | peptide-Leu217+Ile-peptide | P | MS | Glu | Leu | Ala | Leu | Ile | Ala | Thr | Pro | Impens et al., 2010 | ||
| Perilipin-3 | Q9DBG5 | 1-437 | peptide-Leu282+Met-peptide | P | MS | Val | Leu | Gly | Leu | Met | Glu | Ser | Val | Impens et al., 2010 | ||
| Peroxiredoxin-1 | P35700 | 1-199 | peptide-Phe131+Ile-peptide | P | MS | Arg | Gly | Leu | Phe | Ile | Ile | Asp | Asp | Impens et al., 2010 | ||
| Peroxiredoxin-2 | Q61171 | 2-198 | peptide-Leu104+Ala-peptide | P | MS | Ile | Pro | Leu | Leu | Ala | Asp | Val | Thr | Impens et al., 2010 | ||
| Peroxiredoxin-2 | Q61171 | 2-198 | peptide-Phe130+Ile-peptide | P | MS | Arg | Gly | Leu | Phe | Ile | Ile | Asp | Ala | Impens et al., 2010 | ||
| Peroxiredoxin-5, mitochondrial | P99029 | 49-210 | peptide-Asp163+Ser-peptide | P | MS | Leu | Leu | Asp | Asp | Ser | Leu | Val | Ser | Impens et al., 2010 | ||
| Peroxiredoxin-6 | O08709 | 2-224 | peptide-Gly115+Met-peptide | P | MS | Ile | Leu | Leu | Gly | Met | Leu | Asp | Pro | Impens et al., 2010 | ||
| Phosphatidylethanolamine-binding protein 1 | P70296 | 2-187 | peptide-Trp122+Leu-peptide | P | MS | Arg | Tyr | Val | Trp | Leu | Val | Tyr | Glu | Impens et al., 2010 | ||
| Phosphatidylethanolamine-binding protein 1 | P70296 | 2-187 | peptide-Leu123+Val-peptide | P | MS | Tyr | Val | Trp | Leu | Val | Tyr | Glu | Gln | Impens et al., 2010 | ||
| Phosphoglycerate kinase 1 | P09411 | 2-417 | peptide-Leu314+Asp-peptide | P | MS | Trp | Met | Gly | Leu | Asp | Cys | Gly | Thr | Impens et al., 2010 | ||
| Phosphoglycerate kinase 1 | P09411 | 2-417 | peptide-Leu9+Asp-peptide | P | MS | Lys | Leu | Thr | Leu | Asp | Lys | Leu | Asp | Impens et al., 2010 | ||
| Phosphoglycerate kinase 1 | P09411 | 2-417 | peptide-Asp24+Phe-peptide | P | MS | Met | Arg | Val | Asp | Phe | Asn | Val | Pro | Melzer et al., 2012 | ||
| Phosphoglycerate kinase 2 | P09041 | 2-417 | peptide-Asp24+Phe-peptide | P | MS | Met | Arg | Val | Asp | Phe | Asn | Val | Pro | Impens et al., 2010 | ||
| Phosphoglycerate mutase 1 | Q9DBJ1 | 2-254 | peptide-Leu220+Asp-peptide | P | MS | Val | Tyr | Glu | Leu | Asp | Lys | Asn | Leu | Impens et al., 2010 | ||
| Phosphoglycerate mutase 1 | Q9DBJ1 | 2-254 | peptide-Glu169+Glu-peptide | P | MS | Phe | Trp | Asn | Glu | Glu | Ile | Val | Pro | Impens et al., 2010 | ||
| Phosphoglycerate mutase 1 | Q9DBJ1 | 2-254 | peptide-Trp167+Asn-peptide | P | MS | Leu | Pro | Phe | Trp | Asn | Glu | Glu | Ile | Impens et al., 2010 | ||
| Phosphoglycerate mutase 1 | Q9DBJ1 | 2-254 | peptide-Trp25+Tyr-peptide | P | MS | Phe | Ser | Gly | Trp | Tyr | Asp | Ala | Asp | Impens et al., 2010 | ||
| Phosphomannomutase 2 | Q9Z2M7 | 1-242 | peptide-Leu6+Phe-peptide | P | MS | Thr | Leu | Cys | Leu | Phe | Asp | Met | Asp | Impens et al., 2010 | ||
| Phosphoserine phosphatase | Q99LS3 | 1-225 | peptide-Phe193+Ile-peptide | P | MS | Ala | Asp | Ala | Phe | Ile | Gly | Phe | Gly | Impens et al., 2010 | ||
| plasminogen | P00747 | 20-810 | peptide-Leu470+Pro-peptide | P | Val | Val | Leu | Leu | Pro | Asp | Val | Glu | Morikawa et al., 2000 | 19384 | ||
| plasminogen | P00747 | 20-810 | peptide-Leu93+Phe-peptide | P | Asp | Val | Val | Leu | Phe | Glu | Lys | Lys | Morikawa et al., 2000 | 19385 | ||
| plasminogen | P00747 | 20-810 | peptide-Glu718+Ala-peptide | P | Leu | Leu | Lys | Glu | Ala | Gln | Leu | Pro | Morikawa et al., 2000 | 19386 | ||
| Plasminogen activator inhibitor 2, macrophage | P12388 | 1-415 | peptide-Phe333+Asn-peptide | P | MS | Glu | Asp | Ala | Phe | Asn | Lys | Gly | Lys | Impens et al., 2010 | ||
| Plastin-2 | Q61233 | 2-627 | peptide-Phe616+Ala-peptide | P | MS | Met | Thr | Val | Phe | Ala | Cys | Leu | Met | Impens et al., 2010 | ||
| Plastin-2 | Q61233 | 2-627 | peptide-Leu163+Cys-peptide | P | MS | Gly | Ile | Val | Leu | Cys | Lys | Met | Ile | Impens et al., 2010 | ||
| Plastin-2 | Q61233 | 2-627 | peptide-Leu574+Asp-peptide | P | MS | Thr | Glu | Asn | Leu | Asp | Asp | Glu | Glu | Impens et al., 2010 | ||
| Plastin-2 | Q61233 | 2-627 | peptide-Leu37+Phe-peptide | P | MS | Leu | Asn | Asp | Leu | Phe | Lys | Ala | Ala | Impens et al., 2010 | ||
| Plastin-2 | Q61233 | 2-627 | peptide-Gly477+Ile-peptide | P | MS | Ser | Leu | Val | Gly | Ile | Ala | Gly | Gln | Impens et al., 2010 | ||
| Plastin-2 | Q61233 | 2-627 | peptide-Trp129+Ile-peptide | P | MS | Phe | Val | Asn | Trp | Ile | Asn | Lys | Ala | Impens et al., 2010 | ||
| Plastin-2 | Q61233 | 2-627 | peptide-Leu568+Leu-peptide | P | MS | Asn | Tyr | Asp | Leu | Leu | Lys | Thr | Glu | Impens et al., 2010 | ||
| Plastin-3 | Q99K51 | 1-630 | peptide-Trp132+Ile-peptide | P | MS | Phe | Val | Asn | Trp | Ile | Asn | Lys | Ala | Melzer et al., 2012 | ||
| Plastin-3 | Q99K51 | 1-630 | peptide-Leu166+Cys-peptide | P | MS | Gly | Ile | Val | Leu | Cys | Lys | Met | Ile | Melzer et al., 2012 | ||
| Pneumolysin | P0C2J9 | 2-471 | peptide-Trp435+Trp-peptide | P | NT | Ala | Trp | Glu | Trp | Trp | Arg | Thr | Val | Carrasco-Marin et al., 2009 | ||
| Poly(rC)-binding protein 1 | P60335 | 1-356 | peptide-Leu235+Ala-peptide | P | MS | Pro | Leu | Asp | Leu | Ala | Lys | Leu | Asn | Impens et al., 2010 | ||
| Poly(rC)-binding protein 1 | P60335 | 1-356 | peptide-Leu167+Glu-peptide | P | MS | Leu | Val | Met | Leu | Glu | Thr | Leu | Ser | Impens et al., 2010 | ||
| Poly(rC)-binding protein 1 | P60335 | 1-356 | peptide-Met166+Leu-peptide | P | MS | Cys | Leu | Val | Met | Leu | Glu | Thr | Leu | Impens et al., 2010 | ||
| Polyadenylate-binding protein 1 | P29341 | 1-636 | peptide-Phe340+Ser-peptide | P | MS | Phe | Val | Cys | Phe | Ser | Ser | Pro | Glu | Impens et al., 2010 | ||
| Polypyrimidine tract-binding protein 1 | P17225 | 1-527 | peptide-Leu355+Phe-peptide | P | MS | Leu | Phe | Ile | Leu | Phe | Gly | Val | Tyr | Impens et al., 2010 | ||
| Polypyrimidine tract-binding protein 1 | P17225 | 1-527 | peptide-Leu337+Leu-peptide | P | MS | Asn | Ser | Val | Leu | Leu | Val | Ser | Asn | Impens et al., 2010 | ||
| Polypyrimidine tract-binding protein 2 | Q91Z31 | 1-531 | peptide-Leu358+Phe-peptide | P | MS | Leu | Phe | Thr | Leu | Phe | Gly | Val | Tyr | Melzer et al., 2012 | ||
| Prefoldin subunit 2 | O70591 | 1-154 | peptide-Leu108+Gln-peptide | P | MS | Ser | Gln | Gln | Leu | Gln | Ala | Lys | Gly | Impens et al., 2010 | ||
| Prefoldin subunit 3 | P61759 | 1-196 | peptide-Leu64+Asn-peptide | P | MS | Phe | Met | Glu | Leu | Asn | Leu | Ala | Gln | Impens et al., 2010 | ||
| Prefoldin subunit 5 | Q9WU28 | 2-154 | peptide-Tyr90+Tyr-peptide | P | MS | Gly | Thr | Gly | Tyr | Tyr | Val | Glu | Lys | Impens et al., 2010 | ||
| Prefoldin subunit 6 | Q03958 | 2-127 | peptide-Leu64+Val-peptide | P | MS | Gly | Pro | Val | Leu | Val | Lys | Gln | Glu | Impens et al., 2010 | ||
| Pro-interleukin-16 | O54824 | 1-1322 | peptide-Leu937+Leu-peptide | P | MS | Leu | Leu | Arg | Leu | Leu | Thr | Thr | Gln | Impens et al., 2010 | ||
| Profilin-1 | P62962 | 2-140 | peptide-Trp32+Ala-peptide | P | MS | Pro | Ser | Val | Trp | Ala | Ala | Val | Pro | Impens et al., 2010 | ||
| Profilin-1 | P62962 | 2-140 | peptide-Phe59+Phe-peptide | P | MS | Arg | Ser | Ser | Phe | Phe | Val | Asn | Gly | Impens et al., 2010 | ||
| Profilin-1 | P62962 | 2-140 | peptide-Gly63+Leu-peptide | P | MS | Phe | Val | Asn | Gly | Leu | Thr | Leu | Gly | Impens et al., 2010 | ||
| Profilin-1 | P62962 | 2-140 | peptide-Phe40+Val-peptide | P | MS | Gly | Lys | Thr | Phe | Val | Ser | Ile | Thr | Impens et al., 2010 | ||
| Programmed cell death 6-interacting protein | Q9WU78 | 2-869 | peptide-Phe24+Ile-peptide | P | MS | Leu | Val | Lys | Phe | Ile | Gln | Gln | Thr | Impens et al., 2010 | ||
| prolactin | P01236 | 29-227 | peptide-Leu160+Ile-peptide | P | Gly | Met | Glu | Leu | Ile | Val | Ser | Gln | Piwnica et al., 2004 | 19213 | ||
| prolactin | P01236 | 29-227 | peptide-Tyr175+Pro-peptide | P | Asn | Glu | Ile | Tyr | Pro | Val | Trp | Ser | Piwnica et al., 2004 | 19214 | ||
| prolactin | P01236 | 29-227 | peptide-Trp178+Ser-peptide | P | Tyr | Pro | Val | Trp | Ser | Gly | Leu | Pro | Piwnica et al., 2004 | 19215 | ||
| Prolactin | P01237 | 30-226 | Peptide-Trp177+Ser-Peptide | P | NT | Tyr | Leu | Val | Trp | Ser | Gln | Leu | Pro | Cruz-Soto et al., 2009 | ||
| proliferation-associated protein 2G4 | P50580 | 2-394 | peptide-Gln350+Asp-peptide | P | MS | Met | Glu | Val | Gln | Asp | Ala | Glu | Leu | Impens et al., 2010 | ||
| proliferation-associated protein 2G4 | P50580 | 2-394 | peptide-Met347+Glu-peptide | P | MS | Lys | Ser | Glu | Met | Glu | Val | Gln | Asp | Impens et al., 2010 | ||
| proliferation-associated protein 2G4 | P50580 | 2-394 | peptide-Ala282+Phe-peptide | P | MS | Thr | Leu | Arg | Ala | Phe | Glu | Asp | Glu | Impens et al., 2010 | ||
| proliferation-associated protein 2G4 | P50580 | 2-394 | peptide-Gly128+Val-peptide | P | MS | Phe | Val | Ile | Gly | Val | Ala | Gln | Gly | Impens et al., 2010 | ||
| proliferation-associated protein 2G4 | P50580 | 2-394 | peptide-Leu229+Val-peptide | P | MS | Val | Asp | Val | Leu | Val | Ser | Ser | Gly | Impens et al., 2010 | ||
| proliferation-associated protein 2G4 | P50580 | 2-394 | peptide-Leu16+Val-peptide | P | MS | Ala | Glu | Asp | Leu | Val | Val | Thr | Lys | Impens et al., 2010 | ||
| Proteasomal ubiquitin receptor ADRM1 | Q9JKV1 | 2-407 | peptide-Leu301+Ala-peptide | P | MS | Ala | Pro | Ile | Leu | Ala | Asn | Ala | Asp | Impens et al., 2010 | ||
| Proteasome activator complex subunit 1 | P97371 | 1-249 | peptide-Trp134+Leu-peptide | P | MS | Val | Thr | Thr | Trp | Leu | Gln | Leu | Gln | Impens et al., 2010 | ||
| Proteasome activator complex subunit 2 | P97372 | 2-239 | peptide-Ala141+Ile-peptide | P | MS | Phe | Gly | Val | Ala | Ile | Gln | Glu | Lys | Impens et al., 2010 | ||
| Proteasome activator complex subunit 2 | P97372 | 2-239 | peptide-Leu46+Leu-peptide | P | MS | Leu | Ser | Gln | Leu | Leu | Gln | Glu | Asp | Impens et al., 2010 | ||
| Proteasome activator complex subunit 2 | P97372 | 2-239 | peptide-Leu52+Asn-peptide | P | MS | Glu | Asp | Ser | Leu | Asn | Val | Ala | Asp | Impens et al., 2010 | ||
| Proteasome activator complex subunit 2 | P97372 | 2-239 | peptide-Asp50+Ser-peptide | P | MS | Leu | Gln | Glu | Asp | Ser | Leu | Asn | Val | Impens et al., 2010 | ||
| Proteasome subunit alpha type-1 | Q9R1P4 | 1-263 | peptide-Leu108+Val-peptide | P | MS | Val | Ser | Arg | Leu | Val | Ser | Leu | Ile | Impens et al., 2010 | ||
| Proteasome subunit alpha type-2 | P49722 | 2-234 | peptide-Leu46+Ala-peptide | P | MS | Gly | Val | Val | Leu | Ala | Thr | Glu | Lys | Impens et al., 2010 | ||
| Proteasome subunit alpha type-5 | Q9Z2U1 | 1-241 | peptide-Leu119+Ala-peptide | P | MS | Val | Ser | Asn | Leu | Ala | Leu | Gln | Phe | Impens et al., 2010 | ||
| Proteasome subunit alpha type-6 | Q9QUM9 | 1-246 | peptide-Gly77+Cys-peptide | P | MS | Glu | Ser | Ile | Gly | Cys | Val | Met | Thr | Impens et al., 2010 | ||
| Proteasome subunit alpha type-6 | Q9QUM9 | 1-246 | peptide-Ala28+Phe-peptide | P | MS | Val | Glu | Tyr | Ala | Phe | Lys | Ala | Ile | Impens et al., 2010 | ||
| Proteasome subunit alpha type-7 | Q9Z2U0 | 2-248 | peptide-Glu20+Tyr-peptide | P | MS | Phe | Gln | Val | Glu | Tyr | Ala | Gln | Glu | Impens et al., 2010 | ||
| Proteasome subunit beta type-3 | Q9R1P1 | 2-205 | peptide-Leu49+Tyr-peptide | P | MS | Gly | Asp | Arg | Leu | Tyr | Ile | Gly | Leu | Impens et al., 2010 | ||
| Proteasome subunit beta type-9 | O35522 | 21-219 | peptide-Leu97+Ala-peptide | P | MS | Pro | Leu | Val | Leu | Ala | Ala | Ala | Asn | Impens et al., 2010 | ||
| Proteasome subunit beta type-9 | P28076 | 21-219 | peptide-Leu97+Ala-peptide | P | MS | Pro | Leu | Val | Leu | Ala | Ala | Ala | Asn | Melzer et al., 2012 | ||
| Protein C20orf11 homolog | Q9D7M1 | 1-228 | peptide-Tyr36+Leu-peptide | P | MS | Ile | Met | Asn | Tyr | Leu | Val | Thr | Glu | Impens et al., 2010 | ||
| Protein CWC15 homolog | Q9JHS9 | 2-229 | peptide-Leu172+Thr-peptide | P | MS | Leu | Leu | Asn | Leu | Thr | Gly | Pro | Ser | Impens et al., 2010 | ||
| Protein diaphanous homolog 1 | O08808 | 1-1255 | peptide-Leu1186+Glu-peptide | P | MS | Asp | Ser | Leu | Leu | Glu | Ala | Leu | Gln | Impens et al., 2010 | ||
| Protein diaphanous homolog 1 | O08808 | 1-1255 | peptide-Leu1185+Leu-peptide | P | MS | Met | Asp | Ser | Leu | Leu | Glu | Ala | Leu | Impens et al., 2010 | ||
| Protein diaphanous homolog 2 | O70566 | 1-1098 | peptide-Leu1056+Leu-peptide | P | MS | Met | Asp | Asn | Leu | Leu | Glu | Ala | Leu | Melzer et al., 2012 | ||
| Protein diaphanous homolog 2 | O70566 | 1-1098 | peptide-Leu1057+Glu-peptide | P | MS | Asp | Asn | Leu | Leu | Glu | Ala | Leu | Gln | Melzer et al., 2012 | ||
| Protein diaphanous homolog 3 | Q9Z207 | 1-1171 | peptide-Leu1044+Leu-peptide | P | MS | Met | Asp | Ser | Leu | Leu | Glu | Ala | Leu | Melzer et al., 2012 | ||
| Protein diaphanous homolog 3 | Q9Z207 | 1-1171 | peptide-Leu1045+Glu-peptide | P | MS | Asp | Ser | Leu | Leu | Glu | Ala | Leu | Gln | Melzer et al., 2012 | ||
| Protein disulfide-isomerase | P09103 | 20-509 | peptide-Leu81+Ala-peptide | P | MS | Glu | Ile | Arg | Leu | Ala | Lys | Val | Asp | Impens et al., 2010 | ||
| Protein disulfide-isomerase | P09103 | 20-509 | peptide-Leu207+Phe-peptide | P | MS | Gly | Val | Val | Leu | Phe | Lys | Lys | Phe | Impens et al., 2010 | ||
| Protein disulfide-isomerase | P09103 | 20-509 | peptide-Phe106+Phe-peptide | P | MS | Thr | Ile | Lys | Phe | Phe | Lys | Asn | Gly | Impens et al., 2010 | ||
| Protein disulfide-isomerase A2 | D3Z6P0 | 21-527 | peptide-Leu226+Phe-peptide | P | MS | Thr | Val | Val | Leu | Phe | Lys | Lys | Phe | Melzer et al., 2012 | ||
| Protein DJ-1 | Q99LX0 | 1-189 | peptide-Leu82+Ser-peptide | P | MS | Ala | Gln | Asn | Leu | Ser | Glu | Ser | Pro | Impens et al., 2010 | ||
| Protein NDRG1 | Q62433 | 1-394 | peptide-Phe308+Val-peptide | P | MS | Phe | Lys | Tyr | Phe | Val | Gln | Gly | Met | Impens et al., 2010 | ||
| Protein phosphatase 1 regulatory subunit 14B | Q62084 | 2-147 | peptide-Leu100+Leu-peptide | P | MS | Val | Asp | Glu | Leu | Leu | Asp | Met | Glu | Impens et al., 2010 | ||
| Protein quaking | Q9QYS9 | 1-341 | peptide-Leu154+Ile-peptide | P | MS | Leu | His | Val | Leu | Ile | Thr | Val | Glu | Impens et al., 2010 | ||
| Protein S100-A11 | P50543 | 1-98 | peptide-Leu42+Ala-peptide | P | MS | Asn | Thr | Glu | Leu | Ala | Ala | Phe | Thr | Impens et al., 2010 | ||
| Protein S100-A11 | P50543 | 1-98 | peptide-Ala44+Phe-peptide | P | MS | Glu | Leu | Ala | Ala | Phe | Thr | Lys | Asn | Impens et al., 2010 | ||
| Protein S100-A11 | P50543 | 1-98 | peptide-Phe37+Met-peptide | P | MS | Phe | Leu | Ser | Phe | Met | Asn | Thr | Glu | Impens et al., 2010 | ||
| Protein S100-A11 | P50543 | 1-98 | peptide-Phe45+Thr-peptide | P | MS | Leu | Ala | Ala | Phe | Thr | Lys | Asn | Gln | Impens et al., 2010 | ||
| Protein S100-A13 | P97352 | 1-98 | peptide-Leu79+Ile-peptide | P | MS | Tyr | Trp | Arg | Leu | Ile | Gly | Glu | Leu | Impens et al., 2010 | ||
| Protein S100-A4 | P07091 | 2-101 | peptide-Cys81+Ile-peptide | P | MS | Phe | Leu | Ser | Cys | Ile | Ala | Met | Met | Impens et al., 2010 | ||
| Protein S100-A4 | P07091 | 2-101 | peptide-Phe78+Leu-peptide | P | MS | Tyr | Cys | Val | Phe | Leu | Ser | Cys | Ile | Impens et al., 2010 | ||
| Protein S100-A4 | P07091 | 2-101 | peptide-Met84+Met-peptide | P | MS | Cys | Ile | Ala | Met | Met | Cys | Asn | Glu | Impens et al., 2010 | ||
| Protein S100-A6 | P14069 | 1-89 | peptide-Glu41+Leu-peptide | P | MS | Ile | Gln | Lys | Glu | Leu | Thr | Ile | Gly | Impens et al., 2010 | ||
| Protein S100-A9 | P31725 | 2-113 | peptide-Thr48+Phe-peptide | P | MS | Gln | Leu | Ala | Thr | Phe | Met | Lys | Lys | Impens et al., 2010 | ||
| Protein-glutamine gamma-glutamyltransferase 2 | P21981 | 2-686 | peptide-Asp670+Lys-peptide | P | MS | Phe | Gln | Cys | Asp | Lys | Leu | Lys | Ser | Impens et al., 2010 | ||
| Protein-glutamine gamma-glutamyltransferase 2 | P21981 | 2-686 | peptide-Phe667+Gln-peptide | P | MS | Val | Val | Asn | Phe | Gln | Cys | Asp | Lys | Impens et al., 2010 | ||
| Putative RNA-binding protein 3 | O89086 | 1-153 | peptide-Glu34+Val-peptide | P | MS | Pro | Ile | Ser | Glu | Val | Val | Val | Val | Impens et al., 2010 | ||
| Pyruvate kinase isozymes M1/M2 | P52480 | 2-531 | peptide-Asp357+Cys-peptide | P | MS | Asp | Gly | Ala | Asp | Cys | Ile | Met | Leu | Impens et al., 2010 | ||
| Pyruvate kinase isozymes M1/M2 | P52480 | 2-531 | peptide-Leu33+Asp-peptide | P | MS | Met | Cys | Arg | Leu | Asp | Ile | Asp | Ser | Impens et al., 2010 | ||
| Pyruvate kinase isozymes M1/M2 | P52480 | 2-531 | peptide-Leu284+Glu-peptide | P | MS | Asp | Glu | Ile | Leu | Glu | Ala | Ser | Asp | Impens et al., 2010 | ||
| Pyruvate kinase isozymes M1/M2 | P52480 | 2-531 | peptide-Met64+Ile-peptide | P | MS | Leu | Lys | Glu | Met | Ile | Lys | Ser | Gly | Impens et al., 2010 | ||
| Pyruvate kinase isozymes M1/M2 | P52480 | 2-531 | peptide-Leu61+Lys-peptide | P | MS | Val | Glu | Met | Leu | Lys | Glu | Met | Ile | Impens et al., 2010 | ||
| Pyruvate kinase isozymes M1/M2 | P52480 | 2-531 | peptide-Phe307+Leu-peptide | P | MS | Glu | Lys | Val | Phe | Leu | Ala | Gln | Lys | Impens et al., 2010 | ||
| Pyruvate kinase isozymes M1/M2 | P52480 | 2-531 | peptide-Met60+Leu-peptide | P | MS | Ser | Val | Glu | Met | Leu | Lys | Glu | Met | Impens et al., 2010 | ||
| Pyruvate kinase isozymes M1/M2 | P52480 | 2-531 | peptide-Glu63+Met-peptide | P | MS | Met | Leu | Lys | Glu | Met | Ile | Lys | Ser | Impens et al., 2010 | ||
| Pyruvate kinase isozymes M1/M2 | P52480 | 2-531 | peptide-Glu59+Met-peptide | P | MS | Arg | Ser | Val | Glu | Met | Leu | Lys | Glu | Impens et al., 2010 | ||
| Pyruvate kinase isozymes M1/M2 | P52480 | 2-531 | peptide-Leu361+Ser-peptide | P | MS | Cys | Ile | Met | Leu | Ser | Gly | Glu | Thr | Impens et al., 2010 | ||
| Pyruvate kinase isozymes M1/M2 | P52480 | 2-531 | peptide-Ala109+Val-peptide | P | MS | Arg | Pro | Val | Ala | Val | Ala | Leu | Asp | Impens et al., 2010 | ||
| Pyruvate kinase isozymes R/L | P53657 | 1-574 | peptide-Phe350+Leu-peptide | P | MS | Glu | Lys | Val | Phe | Leu | Ala | Gln | Lys | Melzer et al., 2012 | ||
| Rab GDP dissociation inhibitor beta | Q61598 | 1-445 | peptide-Asp385+Leu-peptide | P | MS | Ser | Ile | Ser | Asp | Leu | Phe | Val | Pro | Impens et al., 2010 | ||
| Rab GDP dissociation inhibitor beta | Q61598 | 1-445 | peptide-Asp196+Tyr-peptide | P | MS | Arg | Thr | Asp | Asp | Tyr | Leu | Asp | Gln | Impens et al., 2010 | ||
| Ran-binding protein 3 | Q9CT10 | 2-491 | peptide-Phe19+Gln-peptide | P | MS | Val | Phe | Val | Phe | Gln | Lys | Asp | Lys | Impens et al., 2010 | ||
| Ran-specific GTPase-activating protein | P34022 | 2-203 | peptide-Leu143+Asn-peptide | P | MS | Ile | Arg | Phe | Leu | Asn | Ala | Glu | Asn | Impens et al., 2010 | ||
| Ras GTPase-activating protein-binding protein 1 | P97855 | 2-465 | peptide-Leu406+Asn-peptide | P | MS | Ala | Val | Arg | Leu | Asn | Val | Glu | Glu | Melzer et al., 2012 | ||
| Ras GTPase-activating protein-binding protein 2 | P97379 | 2-482 | peptide-Leu402+Asn-peptide | P | MS | Glu | Val | Arg | Leu | Asn | Val | Glu | Glu | Impens et al., 2010 | ||
| Ras-related protein Rab-7a | P51150 | 1-207 | peptide-Leu182+Tyr-peptide | P | MS | Glu | Val | Glu | Leu | Tyr | Asn | Glu | Phe | Impens et al., 2010 | ||
| Regulation of nuclear pre-mRNA domain-containing protein 1B | Q9CSU0 | 1-326 | peptide-Leu187+Glu-peptide | P | MS | Leu | Gln | Asp | Leu | Glu | Asn | Ala | Ala | Impens et al., 2010 | ||
| Regulator of G-protein signaling 10 | Q9CQE5 | 1-181 | peptide-Leu72+Ala-peptide | P | MS | Leu | Phe | Trp | Leu | Ala | Cys | Glu | Asp | Impens et al., 2010 | ||
| Regulator of G-protein signaling 10 | Q9CQE5 | 1-181 | peptide-Leu45+Leu-peptide | P | MS | Leu | Glu | Asn | Leu | Leu | Glu | Asp | Pro | Impens et al., 2010 | ||
| Reticulon-2 | O70622 | 1-471 | peptide-Arg325+Lys-peptide | P | MS | Arg | Val | Tyr | Arg | Lys | Val | Leu | Gln | Impens et al., 2010 | ||
| Rho GDP-dissociation inhibitor 2 | Q61599 | 2-200 | peptide-Tyr152+Glu-peptide | P | MS | Pro | Glu | Glu | Tyr | Glu | Phe | Leu | Thr | Impens et al., 2010 | ||
| Rho GDP-dissociation inhibitor 2 | Q61599 | 2-200 | peptide-Glu153+Phe-peptide | P | MS | Glu | Glu | Tyr | Glu | Phe | Leu | Thr | Pro | Impens et al., 2010 | ||
| Rho GDP-dissociation inhibitor 2 | Q61599 | 2-200 | peptide-Leu100+Lys-peptide | P | MS | Thr | Phe | Val | Leu | Lys | Glu | Gly | Ile | Impens et al., 2010 | ||
| Rho GDP-dissociation inhibitor 2 | Q61599 | 2-200 | peptide-Phe154+Leu-peptide | P | MS | Glu | Tyr | Glu | Phe | Leu | Thr | Pro | Val | Impens et al., 2010 | ||
| Rho GDP-dissociation inhibitor 2 | Q61599 | 2-200 | peptide-Phe98+Val-peptide | P | MS | Lys | Asp | Thr | Phe | Val | Leu | Lys | Glu | Impens et al., 2010 | ||
| Ribosomal protein S6 kinase alpha-3 | P18654 | 1-740 | peptide-Phe83+Leu-peptide | P | MS | Gly | Lys | Val | Phe | Leu | Val | Lys | Lys | Impens et al., 2010 | ||
| RUN and FYVE domain-containing protein 1 | Q8BIJ7 | 1-712 | peptide-Leu183+Val-peptide | P | MS | Pro | Leu | Glu | Leu | Val | Glu | Lys | Leu | Impens et al., 2010 | ||
| S-formylglutathione hydrolase | Q9R0P3 | 1-282 | peptide-Phe239+Ile-peptide | P | MS | Pro | Asp | Asn | Phe | Ile | Ala | Ala | Cys | Impens et al., 2010 | ||
| Septin-2 | P42208 | 1-361 | peptide-Leu245+Ile-peptide | P | MS | Ser | Asn | Gln | Leu | Ile | Glu | Ala | Lys | Impens et al., 2010 | ||
| Septin-7 | O55131 | 1-436 | peptide-Phe360+Glu-peptide | P | MS | Glu | Gln | Val | Phe | Glu | Met | Lys | Val | Impens et al., 2010 | ||
| Septin-7 | O55131 | 1-436 | peptide-Met362+Lys-peptide | P | MS | Val | Phe | Glu | Met | Lys | Val | Lys | Glu | Impens et al., 2010 | ||
| Serine/threonine-protein kinase 24 | Q99KH8 | 1-431 | peptide-Phe372+Ala-peptide | P | MS | Ser | Pro | Leu | Phe | Ala | Glu | Leu | Lys | Impens et al., 2010 | ||
| Serine/threonine-protein kinase PAK 2 | Q8CIN4 | 1-524 | peptide-Leu514+Ala-peptide | P | MS | Pro | Leu | Ile | Leu | Ala | Ala | Lys | Glu | Impens et al., 2010 | ||
| Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform | Q76MZ3 | 2-589 | peptide-Leu96+Ala-peptide | P | MS | Leu | Glu | Ser | Leu | Ala | Thr | Val | Glu | Impens et al., 2010 | ||
| Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform | Q7TNP2 | 1-601 | peptide-Leu108+Ala-peptide | P | MS | Leu | Glu | Ser | Leu | Ala | Thr | Val | Glu | Melzer et al., 2012 | ||
| Serpin B6 | Q60854 | 1-378 | peptide-Leu77+Leu-peptide | P | MS | Phe | Gln | Ser | Leu | Leu | Thr | Glu | Val | Impens et al., 2010 | ||
| Seryl-tRNA synthetase, cytoplasmic | P26638 | 2-512 | peptide-Leu95+Ala-peptide | P | MS | Ala | Asp | Ala | Leu | Ala | Ala | Leu | Lys | Impens et al., 2010 | ||
| Seryl-tRNA synthetase, cytoplasmic | P26638 | 2-512 | peptide-Leu98+Lys-peptide | P | MS | Leu | Ala | Ala | Leu | Lys | Val | Ser | Gln | Impens et al., 2010 | ||
| SH3 domain-binding glutamic acid-rich-like protein | Q9JJU8 | 1-114 | peptide-Gly33+Phe-peptide | P | MS | Asn | Lys | Ile | Gly | Phe | Glu | Glu | Lys | Impens et al., 2010 | ||
| SH3 domain-binding glutamic acid-rich-like protein | Q9JJU8 | 1-114 | peptide-Phe26+Leu-peptide | P | MS | Val | Leu | Cys | Phe | Leu | Glu | Ala | Asn | Impens et al., 2010 | ||
| Shootin-1 | Q8K2Q9 | 1-631 | peptide-Phe239+Ile-peptide | P | MS | Gln | Glu | Met | Phe | Ile | Glu | Gln | Asn | Impens et al., 2010 | ||
| Signal recognition particle 19 kDa protein | Q9D7A6 | 2-144 | peptide-Ala60+Phe-peptide | P | MS | Gly | Leu | Asn | Ala | Phe | Leu | Glu | Lys | Impens et al., 2010 | ||
| small inducible cytokine A20 | P78556 | 27-96 | peptide-Phe45+Ile-peptide | P | His | Pro | Lys | Phe | Ile | Val | Gly | Phe | Hasan etal, 2006 | 19700 | ||
| small inducible cytokine A20 | P78556 | 27-96 | peptide-Gly48+Phe-peptide | P | Phe | Ile | Val | Gly | Phe | Thr | Arg | Gln | Hasan etal, 2006 | 19701 | ||
| small inducible cytokine A20 | P78556 | 27-96 | peptide-Lys78+Gln-peptide | P | Ala | Asn | Pro | Lys | Gln | Thr | Trp | Val | Hasan etal, 2006 | 19702 | ||
| small inducible cytokine A20 | P78556 | 27-96 | peptide-Trp81+Val-peptide | P | Lys | Gln | Thr | Trp | Val | Lys | Tyr | Ile | Hasan etal, 2006 | 19703 | ||
| small inducible cytokine A20 | P78556 | 27-96 | peptide-Tyr84+Ile-peptide | P | Trp | Val | Lys | Tyr | Ile | Val | Arg | Leu | Hasan etal, 2006 | 19704 | ||
| small inducible cytokine A21 | O00585 | 24-134 | peptide-Leu81+Trp-peptide | P | Pro | Lys | Glu | Leu | Trp | Val | Gln | Gln | Wolf et al., 2003 | 3126 | ||
| Small nuclear ribonucleoprotein Sm D1 | P62315 | 1-119 | peptide-Leu79+Leu-peptide | P | MS | Leu | Asp | Thr | Leu | Leu | Val | Asp | Val | Impens et al., 2010 | ||
| Small nuclear ribonucleoprotein Sm D1 | P62315 | 1-119 | peptide-Leu80+Val-peptide | P | MS | Asp | Thr | Leu | Leu | Val | Asp | Val | Glu | Impens et al., 2010 | ||
| Small nuclear ribonucleoprotein-associated protein B | P27048 | 1-231 | peptide-Ser79+Met-peptide | P | MS | Asn | Leu | Val | Ser | Met | Thr | Val | Glu | Impens et al., 2010 | ||
| Small nuclear ribonucleoprotein-associated protein B | P27048 | 1-231 | peptide-Leu77+Val-peptide | P | MS | Gly | Glu | Asn | Leu | Val | Ser | Met | Thr | Impens et al., 2010 | ||
| Small nuclear ribonucleoprotein-associated protein N | P63163 | 1-240 | peptide-Leu77+Val-peptide | P | MS | Gly | Glu | Asn | Leu | Val | Ser | Met | Thr | Melzer et al., 2012 | ||
| Small nuclear ribonucleoprotein-associated protein N | P63163 | 1-240 | peptide-Ser79+Met-peptide | P | MS | Asn | Leu | Val | Ser | Met | Thr | Val | Glu | Melzer et al., 2012 | ||
| Sorcin | Q6P069 | 1-198 | peptide-Phe39+Ala-peptide | P | MS | Tyr | Gly | Tyr | Phe | Ala | Ala | Val | Ala | Impens et al., 2010 | ||
| Sorting nexin-3 | O70492 | 2-162 | peptide-Asp147+Glu-peptide | P | MS | Phe | Leu | Gln | Asp | Glu | Ile | Ile | Asp | Impens et al., 2010 | ||
| Sorting nexin-3 | O70492 | 2-162 | peptide-Asp32+Val-peptide | P | MS | Leu | Glu | Ile | Asp | Val | Ser | Asn | Pro | Impens et al., 2010 | ||
| SPARC | P09486 | 18-303 | peptide-Leu175+Val-peptide | P | MS | Lys | Asn | Val | Leu | Val | Thr | Leu | Tyr | Alcaraz et al., 2021 | ||
| SPARC | P09486 | 18-303 | peptide-Leu178+Tyr-peptide | P | MS | Leu | Val | Thr | Leu | Tyr | Glu | Arg | Asp | Alcaraz et al., 2021 | ||
| SPARC | P09486 | 18-303 | peptide-Leu206+Glu-peptide | P | MS | Glu | Lys | Arg | Leu | Glu | Ala | Gly | Asp | Alcaraz et al., 2021 | ||
| SPARC | P09486 | 18-303 | peptide-Phe229+Pro-peptide | P | MS | Met | Tyr | Ile | Phe | Pro | Val | His | Trp | Alcaraz et al., 2021 | ||
| SPARC | P09486 | 18-303 | peptide-His232+Trp-peptide | P | MS | Phe | Pro | Val | His | Trp | Gln | Phe | Gly | Alcaraz et al., 2021 | ||
| SPARC | P09486 | 18-303 | peptide-Gln234+Phe-peptide | P | MS | Val | His | Trp | Gln | Phe | Gly | Gln | Leu | Alcaraz et al., 2021 | ||
| SPARC | P09486 | 18-303 | peptide-Phe235+Gly-peptide | P | MS | His | Trp | Gln | Phe | Gly | Gln | Leu | Asp | Alcaraz et al., 2021 | ||
| SPARC | P09486 | 18-303 | peptide-Gly236+Gln-peptide | P | MS | Trp | Gln | Phe | Gly | Gln | Leu | Asp | Gln | Alcaraz et al., 2021 | ||
| SPARC | P09486 | 18-303 | peptide-Leu238+Asp-peptide | P | MS | Phe | Gly | Gln | Leu | Asp | Gln | His | Pro | Alcaraz et al., 2021 | ||
| SPARC | P09486 | 18-303 | peptide-Gly245+Tyr-peptide | P | MS | Pro | Ile | Asp | Gly | Tyr | Leu | Ser | His | Alcaraz et al., 2021 | ||
| SPARC | P09486 | 18-303 | peptide-Tyr246+Leu-peptide | P | MS | Ile | Asp | Gly | Tyr | Leu | Ser | His | Thr | Alcaraz et al., 2021 | ||
| SPARC | P09486 | 18-303 | peptide-Leu247+Ser-peptide | P | MS | Asp | Gly | Tyr | Leu | Ser | His | Thr | Glu | Alcaraz et al., 2021 | ||
| SPARC | P09486 | 18-303 | peptide-Ala257+Pro-peptide | P | MS | Pro | Leu | Arg | Ala | Pro | Leu | Ile | Pro | Alcaraz et al., 2021 | ||
| Splicing factor 3A subunit 3 | Q9D554 | 1-501 | peptide-Leu300+Phe-peptide | P | MS | Asp | Thr | Ser | Leu | Phe | Ala | Lys | Asn | Impens et al., 2010 | ||
| Splicing factor 3B subunit 5 | Q923D4 | 1-86 | peptide-Phe53+Ala-peptide | P | MS | Leu | Asn | Tyr | Phe | Ala | Ile | Ala | Glu | Impens et al., 2010 | ||
| Splicing factor 3B subunit 5 | Q923D4 | 1-86 | peptide-Tyr52+Phe-peptide | P | MS | Leu | Leu | Asn | Tyr | Phe | Ala | Ile | Ala | Impens et al., 2010 | ||
| Splicing factor, arginine/serine-rich 5 | O35326 | 1-270 | peptide-Arg16+Glu-peptide | P | MS | Pro | Ala | Ala | Arg | Glu | Lys | Asp | Val | Impens et al., 2010 | ||
| STE20-like serine/threonine-protein kinase | O54988 | 1-1233 | peptide-Phe1201+Phe-peptide | P | MS | Gln | Glu | Val | Phe | Phe | Lys | Met | Thr | Impens et al., 2010 | ||
| Stress-induced-phosphoprotein 1 | Q60864 | 1-543 | peptide-Cys420+Ile-peptide | P | MS | Cys | Glu | Glu | Cys | Ile | Gln | Leu | Glu | Impens et al., 2010 | ||
| Stress-induced-phosphoprotein 1 | Q60864 | 1-543 | peptide-Leu133+Tyr-peptide | P | MS | Leu | Pro | Asn | Leu | Tyr | Gln | Lys | Leu | Impens et al., 2010 | ||
| Stromal cell-derived factor 2-like protein 1 | Q9ESP1 | 29-221 | peptide-Phe170+Leu-peptide | P | MS | Thr | Ser | Val | Phe | Leu | Ser | Val | Thr | Impens et al., 2010 | ||
| substance P | P20366 | 58-68 | peptide-Phe64+Phe-peptide | N | Pro | Gln | Gln | Phe | Phe | Gly | Leu | Met | Kageyama et al., 1995 | 26566 | ||
| SUMO-activating enzyme subunit 1 | Q9R1T2 | 1-350 | peptide-Phe178+Val-peptide | P | MS | Glu | His | Glu | Phe | Val | Glu | Glu | Lys | Impens et al., 2010 | ||
| Suppressor of G2 allele of SKP1 homolog | Q9CX34 | 2-336 | peptide-Leu283+Phe-peptide | P | MS | Leu | Asn | Lys | Leu | Phe | Gln | Gln | Ile | Impens et al., 2010 | ||
| Synaptic vesicle membrane protein VAT-1 homolog | Q62465 | 2-406 | peptide-Gly68+Phe-peptide | P | MS | Val | Leu | Thr | Gly | Phe | Gly | Gly | Tyr | Impens et al., 2010 | ||
| Synaptic vesicle membrane protein VAT-1 homolog | Q62465 | 2-406 | peptide-Leu66+Thr-peptide | P | MS | Cys | Leu | Val | Leu | Thr | Gly | Phe | Gly | Impens et al., 2010 | ||
| Synaptosomal-associated protein 29 | Q9ERB0 | 1-260 | peptide-Leu66+Met-peptide | P | MS | Ser | Leu | Ser | Leu | Met | Tyr | Glu | Ser | Impens et al., 2010 | ||
| T-complex protein 1 subunit beta | P80314 | 2-535 | peptide-Gly217+Phe-peptide | P | MS | Leu | Asp | Glu | Gly | Phe | Leu | Leu | Asp | Impens et al., 2010 | ||
| T-complex protein 1 subunit delta | P80315 | 2-539 | peptide-Leu530+Lys-peptide | P | MS | Arg | Ser | Ile | Leu | Lys | Ile | Asp | Asp | Impens et al., 2010 | ||
| T-complex protein 1 subunit epsilon | P80316 | 2-541 | peptide-Leu510+Ile-peptide | P | MS | Ile | Glu | Thr | Leu | Ile | Gly | Lys | Lys | Impens et al., 2010 | ||
| T-complex protein 1 subunit epsilon | P80316 | 2-541 | peptide-Met526+Ile-peptide | P | MS | Met | Val | Arg | Met | Ile | Leu | Lys | Ile | Impens et al., 2010 | ||
| T-complex protein 1 subunit epsilon | P80316 | 2-541 | peptide-Phe16+Leu-peptide | P | MS | Gly | Arg | Pro | Phe | Leu | Ile | Ile | Lys | Impens et al., 2010 | ||
| T-complex protein 1 subunit eta | P80313 | 1-544 | peptide-Leu512+Ile-peptide | P | MS | Ala | Ala | Cys | Leu | Ile | Val | Ser | Val | Impens et al., 2010 | ||
| T-complex protein 1 subunit theta | P42932 | 2-548 | peptide-Leu63+Phe-peptide | P | MS | Leu | Glu | Lys | Leu | Phe | Val | Thr | Asn | Impens et al., 2010 | ||
| Talin-1 | P26039 | 1-2541 | peptide-Leu1607+Glu-peptide | P | MS | Lys | Thr | Met | Leu | Glu | Ser | Ala | Gly | Impens et al., 2010 | ||
| Talin-1 | P26039 | 1-2541 | peptide-Met1997+Phe-peptide | P | MS | Thr | Thr | Ile | Met | Phe | Ala | Thr | Ala | Impens et al., 2010 | ||
| Talin-1 | P26039 | 1-2541 | peptide-Leu2128+Leu-peptide | P | MS | Val | Thr | Ser | Leu | Leu | Lys | Thr | Val | Impens et al., 2010 | ||
| Talin-1 | P26039 | 1-2541 | peptide-Leu133+Met-peptide | P | MS | Val | Arg | Glu | Leu | Met | Glu | Glu | Lys | Impens et al., 2010 | ||
| Talin-1 | P26039 | 1-2541 | peptide-Leu1572+Ser-peptide | P | MS | Val | Asp | Asn | Leu | Ser | Ala | Phe | Ala | Impens et al., 2010 | ||
| Talin-1 | P26039 | 1-2541 | peptide-Leu806+Thr-peptide | P | MS | Asp | Thr | Ile | Leu | Thr | Val | Thr | Glu | Impens et al., 2010 | ||
| Talin-1 | P26039 | 1-2541 | peptide-Leu2033+Val-peptide | P | MS | Thr | Lys | Val | Leu | Val | Gln | Asn | Ala | Impens et al., 2010 | ||
| Talin-1 | P26039 | 1-2541 | peptide-Glu269+Tyr-peptide | P | MS | Leu | Pro | Lys | Glu | Tyr | Val | Lys | Gln | Impens et al., 2010 | ||
| TAR DNA-binding protein 43 | Q921F2 | 1-414 | peptide-Leu27+Leu-peptide | P | MS | Gly | Thr | Val | Leu | Leu | Ser | Thr | Val | Impens et al., 2010 | ||
| tetanus toxin | P04958 | 872-1315 | peptide-Phe1112+Leu-peptide | P | Ser | Ile | Thr | Phe | Leu | Arg | Asp | Phe | Hewitt et al., 1997 | |||
| tetanus toxin | P04958 | 872-1315 | peptide-Asp1124+Thr-peptide | P | Leu | Arg | Tyr | Asp | Thr | Glu | Tyr | Tyr | Hewitt et al., 1997 | |||
| tetanus toxin | P04958 | 872-1315 | peptide-Tyr1127+Tyr-peptide | P | Asp | Thr | Glu | Tyr | Tyr | Leu | Ile | Pro | Hewitt et al., 1997 | |||
| tetanus toxin | P04958 | 872-1315 | peptide-Leu1141+Lys-peptide | P | Asp | Val | Gln | Leu | Lys | Asn | Ile | Thr | Hewitt et al., 1997 | |||
| tetanus toxin | P04958 | 872-1315 | peptide-Tyr1147+Met-peptide | P | Ile | Thr | Asp | Tyr | Met | Tyr | Leu | Thr | Hewitt et al., 1997 | |||
| tetanus toxin | P04958 | 872-1315 | peptide-Met1148+Tyr-peptide | P | Thr | Asp | Tyr | Met | Tyr | Leu | Thr | Asn | Hewitt et al., 1997 | |||
| tetanus toxin | P04958 | 872-1315 | peptide-Tyr1149+Leu-peptide | P | Asp | Tyr | Met | Tyr | Leu | Thr | Asn | Ala | Hewitt et al., 1997 | |||
| tetanus toxin | P04958 | 872-1315 | peptide-Tyr1164+Tyr-peptide | P | Leu | Asn | Ile | Tyr | Tyr | Arg | Arg | Leu | Hewitt et al., 1997 | |||
| tetanus toxin | P04958 | 872-1315 | peptide-Phe1174+Ile-peptide | P | Gly | Leu | Lys | Phe | Ile | Ile | Lys | Arg | Hewitt et al., 1997 | |||
| tetanus toxin | P04958 | 872-1315 | peptide-Ser1187+Phe-peptide | P | Glu | Ile | Asp | Ser | Phe | Val | Lys | Ser | Hewitt et al., 1997 | |||
| tetanus toxin | P04958 | 872-1315 | peptide-Phe1188+Val-peptide | P | Ile | Asp | Ser | Phe | Val | Lys | Ser | Gly | Hewitt et al., 1997 | |||
| tetanus toxin | P04958 | 872-1315 | peptide-Leu1220+Asp-peptide | P | Phe | Asn | Asn | Leu | Asp | Arg | Ile | Leu | Hewitt et al., 1997 | |||
| tetanus toxin | P04958 | 872-1315 | peptide-Tyr1236+Lys-peptide | P | Ile | Pro | Leu | Tyr | Lys | Lys | Met | Glu | Hewitt et al., 1997 | |||
| tetanus toxin | P04958 | 872-1315 | peptide-Ser1251+Val-peptide | P | Lys | Thr | Tyr | Ser | Val | Gln | Leu | Lys | Hewitt et al., 1997 | |||
| tetanus toxin | P04958 | 872-1315 | peptide-Leu1256+Tyr-peptide | P | Gln | Leu | Lys | Leu | Tyr | Asp | Asp | Lys | Hewitt et al., 1997 | |||
| tetanus toxin | P04958 | 872-1315 | peptide-Leu1266+Val-peptide | P | Ser | Leu | Gly | Leu | Val | Gly | Thr | His | Hewitt et al., 1997 | |||
| tetanus toxin | P04958 | 872-1315 | peptide-Leu1283+Ile-peptide | P | Arg | Asp | Ile | Leu | Ile | Ala | Ser | Asn | Hewitt et al., 1997 | |||
| tetanus toxin | P04958 | 872-1315 | peptide-Trp1288+Tyr-peptide | P | Ala | Ser | Asn | Trp | Tyr | Phe | Asn | His | Hewitt et al., 1997 | |||
| tetanus toxin | P04958 | 872-1315 | peptide-Gly1299+Cys-peptide | P | Lys | Ile | Leu | Gly | Cys | Asp | Trp | Tyr | Hewitt et al., 1997 | |||
| tetanus toxin | P04958 | 872-1315 | peptide-Trp1302+Tyr-peptide | P | Gly | Cys | Asp | Trp | Tyr | Phe | Val | Pro | Hewitt et al., 1997 | |||
| Thioredoxin domain-containing protein 12 | Q9CQU0 | 25-170 | peptide-Phe138+Tyr-peptide | P | MS | Tyr | Lys | Tyr | Phe | Tyr | Val | Ser | Ala | Impens et al., 2010 | ||
| Thioredoxin-like protein 1 | Q8CDN6 | 2-289 | peptide-Phe265+Ile-peptide | P | MS | Tyr | Phe | Thr | Phe | Ile | Gly | Thr | Pro | Impens et al., 2010 | ||
| Threonyl-tRNA synthetase, cytoplasmic | Q9D0R2 | 1-722 | peptide-Leu673+Val-peptide | P | MS | Asn | Phe | Ile | Leu | Val | Val | Gly | Glu | Impens et al., 2010 | ||
| thyroglobulin | P01266 | 20-2768 | peptide-Ala569+Ser-peptide | P | Lys | Phe | Leu | Ala | Ser | Leu | Leu | Glu | Dunn et al., 1991 | 18012 | ||
| thyroglobulin | P01266 | 20-2768 | peptide-Phe2487+Leu-peptide | P | Asp | Gly | His | Phe | Leu | Arg | Glu | Pro | Dunn et al., 1991 | 18007 | ||
| thyroglobulin | P01266 | 20-2768 | peptide-Leu1855+Phe-peptide | P | Thr | Thr | Glu | Leu | Phe | Ser | Pro | Val | Dunn et al., 1991 | 26906 | ||
| thyroglobulin | P01266 | 20-2768 | peptide-Phe2662+Ile-peptide | P | Phe | Ser | His | Phe | Ile | Arg | Ser | Gly | Dunn et al., 1991 | 26910 | ||
| Transaldolase | Q93092 | 1-337 | peptide-Leu128+Tyr-peptide | P | MS | Leu | Ile | Glu | Leu | Tyr | Lys | Glu | Ala | Impens et al., 2010 | ||
| Transcription factor BTF3 | Q64152 | 1-204 | peptide-Leu149+Asn-peptide | P | MS | Pro | Ser | Ile | Leu | Asn | Gln | Leu | Gly | Impens et al., 2010 | ||
| Transcription factor Sp1 | O89090 | 1-784 | peptide-Phe343+Thr-peptide | P | MS | Ile | Met | Asn | Phe | Thr | Ser | Ser | Gly | Impens et al., 2010 | ||
| Transgelin-2 | Q9WVA4 | 2-199 | peptide-Leu129+Met-peptide | P | MS | Gln | Arg | Thr | Leu | Met | Asn | Leu | Gly | Impens et al., 2010 | ||
| Translationally-controlled tumor protein | P63028 | 1-172 | peptide-Leu29+Glu-peptide | P | MS | Gly | Leu | Cys | Leu | Glu | Val | Glu | Gly | Impens et al., 2010 | ||
| Translationally-controlled tumor protein | P63028 | 1-172 | peptide-Leu13+Phe-peptide | P | MS | His | Asp | Glu | Leu | Phe | Ser | Asp | Ile | Impens et al., 2010 | ||
| Triosephosphate isomerase | P17751-2 | 2-299 | peptide-Trp169+Ala-peptide | P | MS | Glu | Pro | Val | Trp | Ala | Ile | Gly | Thr | Impens et al., 2010 | ||
| Triosephosphate isomerase | P17751-2 | 2-299 | peptide-Cys127+Ile-peptide | P | MS | Val | Ile | Ala | Cys | Ile | Gly | Glu | Lys | Impens et al., 2010 | ||
| Triosephosphate isomerase | P17751-2 | 2-299 | peptide-Leu29+Asn-peptide | P | MS | Ile | Cys | Thr | Leu | Asn | Ala | Ala | Asn | Impens et al., 2010 | ||
| tRNA methyltransferase 112 homolog | Q9DCG9 | 1-125 | peptide-Leu63+Ala-peptide | P | MS | Thr | Leu | Asn | Leu | Ala | Glu | Val | Pro | Impens et al., 2010 | ||
| Tryptophanyl-tRNA synthetase, cytoplasmic | P32921 | 1-481 | peptide-Leu107+Ile-peptide | P | MS | Tyr | Asp | Lys | Leu | Ile | Val | Gln | Phe | Impens et al., 2010 | ||
| Tubulin alpha-1A chain | P68369 | 1-451 | peptide-Leu92+Ile-peptide | P | MS | Pro | Glu | Gln | Leu | Ile | Thr | Gly | Lys | Melzer et al., 2012 | ||
| Tubulin alpha-1B chain | P05213 | 1-451 | peptide-Leu92+Ile-peptide | P | MS | Pro | Glu | Gln | Leu | Ile | Thr | Gly | Lys | Impens et al., 2010 | ||
| Tubulin alpha-1C chain | P68373 | 1-449 | peptide-Leu92+Ile-peptide | P | MS | Pro | Glu | Gln | Leu | Ile | Thr | Gly | Lys | Melzer et al., 2012 | ||
| Tubulin alpha-3 chain | P05214 | 1-450 | peptide-Leu92+Ile-peptide | P | MS | Pro | Glu | Gln | Leu | Ile | Thr | Gly | Lys | Melzer et al., 2012 | ||
| Tubulin alpha-4A chain | P68368 | 1-448 | peptide-Leu92+Ile-peptide | P | MS | Pro | Glu | Gln | Leu | Ile | Thr | Gly | Lys | Melzer et al., 2012 | ||
| Tubulin alpha-8 chain | Q9JJZ2 | 1-449 | peptide-Leu92+Ile-peptide | P | MS | Pro | Glu | Gln | Leu | Ile | Thr | Gly | Lys | Melzer et al., 2012 | ||
| Tubulin-folding cofactor B | Q9D1E6 | 1-244 | peptide-Phe14+Ile-peptide | P | MS | Val | Met | Val | Phe | Ile | Ser | Ser | Ser | Impens et al., 2010 | ||
| Tubulin-specific chaperone A | P48428 | 2-108 | peptide-Leu88+Glu-peptide | P | MS | Glu | Lys | Asp | Leu | Glu | Glu | Ala | Glu | Impens et al., 2010 | ||
| Tubulin-specific chaperone A | P48428 | 2-108 | peptide-Leu78+Gln-peptide | P | MS | Tyr | Thr | Asp | Leu | Gln | Gln | Ile | Leu | Impens et al., 2010 | ||
| Tyrosine-protein phosphatase non-receptor type 11 | P35235 | 1-597 | peptide-Leu210+Gln-peptide | P | MS | Gly | Thr | Val | Leu | Gln | Leu | Lys | Gln | Impens et al., 2010 | ||
| U2 small nuclear ribonucleoprotein B' | Q9CQI7 | 1-225 | peptide-Phe191+Val-peptide | P | MS | Asp | Ile | Ala | Phe | Val | Glu | Phe | Glu | Melzer et al., 2012 | ||
| Ubiquilin-1 | Q8R317 | 2-582 | peptide-Leu290+Val-peptide | P | MS | Phe | Ala | Ser | Leu | Val | Ser | Ser | Ser | Impens et al., 2010 | ||
| Ubiquitin thioesterase OTUB1 | Q7TQI3 | 2-271 | peptide-Leu104+Leu-peptide | P | MS | Leu | Glu | Ala | Leu | Leu | Asp | Asp | Ser | Impens et al., 2010 | ||
| Ubiquitin-like modifier-activating enzyme 1 | Q02053 | 1-1058 | peptide-Leu358+Val-peptide | P | MS | Ala | Thr | Glu | Leu | Val | Gly | Leu | Ala | Impens et al., 2010 | ||
| UBX domain-containing protein 6 | Q99PL6 | 1-442 | peptide-Phe122+Phe-peptide | P | MS | Pro | Gly | Val | Phe | Phe | Ile | Cys | Pro | Impens et al., 2010 | ||
| UMP-CMP kinase | Q9DBP5 | 1-196 | peptide-Val6+Phe-peptide | P | MS | Pro | Leu | Val | Val | Phe | Val | Leu | Gly | Impens et al., 2010 | ||
| UMP-CMP kinase | Q9DBP5 | 1-196 | peptide-Phe7+Val-peptide | P | MS | Leu | Val | Val | Phe | Val | Leu | Gly | Gly | Impens et al., 2010 | ||
| UPF0727 protein C6orf115 homolog | Q4KML4 | 1-81 | peptide-Leu46+Val-peptide | P | MS | Phe | Glu | Ala | Leu | Val | Gly | Thr | Leu | Impens et al., 2010 | ||
| UV excision repair protein RAD23 homolog A | P54726 | 1-363 | peptide-Tyr313+Ile-peptide | P | MS | Gln | Met | Asn | Tyr | Ile | Gln | Val | Thr | Impens et al., 2010 | ||
| UV excision repair protein RAD23 homolog B | P54728 | 1-416 | peptide-Tyr366+Ile-peptide | P | MS | His | Met | Asn | Tyr | Ile | Gln | Val | Thr | Melzer et al., 2012 | ||
| V-type proton ATPase subunit D | P57746 | 1-247 | peptide-Phe74+Thr-peptide | P | MS | Glu | Ala | Lys | Phe | Thr | Ala | Gly | Asp | Impens et al., 2010 | ||
| V-type proton ATPase subunit E 1 | P50518 | 2-226 | peptide-Leu202+Ile-peptide | P | MS | Arg | Leu | Asp | Leu | Ile | Ala | Gln | Gln | Impens et al., 2010 | ||
| V-type proton ATPase subunit E 1 | P50518 | 2-226 | peptide-Asp93+Leu-peptide | P | MS | Leu | Ile | Thr | Asp | Leu | Leu | Asn | Glu | Impens et al., 2010 | ||
| vascular endothelial growth factor C | P49767 | 32-419 | peptide-Leu119+Lys-peptide | P | NT | Thr | Glu | Ile | Leu | Lys | Ser | Ile | Asp | Kunnapuu et al., 2021 | ||
| vascular endothelial growth factor D | O43915 | 22-354 | peptide-Leu99+Lys-peptide | P | NT | Ile | Glu | Thr | Leu | Lys | Val | Ile | Asp | Kunnapuu et al., 2021 | ||
| Vimentin | P20152 | 2-466 | peptide-Leu88+Ala-peptide | P | MS | Asp | Phe | Ser | Leu | Ala | Asp | Ala | Ile | Impens et al., 2010 | ||
| Vimentin | P20152 | 2-466 | peptide-Phe86+Ser-peptide | P | MS | Ser | Val | Asp | Phe | Ser | Leu | Ala | Asp | Impens et al., 2010 | ||
| WASH complex subunit FAM21 | Q6PGL7 | 1-1334 | peptide-Phe1233+Ala-peptide | P | MS | Asp | Asp | Ile | Phe | Ala | Thr | Glu | Ala | Impens et al., 2010 | ||
| WASH complex subunit FAM21 | Q6PGL7 | 1-1334 | peptide-Leu857+Phe-peptide | P | MS | Asp | Val | Asp | Leu | Phe | Ala | Gly | Thr | Impens et al., 2010 | ||
| WASH complex subunit FAM21 | Q6PGL7 | 1-1334 | peptide-Leu669+Phe-peptide | P | MS | Glu | Val | Asp | Leu | Phe | Ala | Ile | Ala | Impens et al., 2010 | ||
| WD repeat-containing protein 1 | O88342 | 2-606 | peptide-Phe71+Tyr-peptide | P | MS | Pro | Ser | Gly | Phe | Tyr | Ile | Ala | Ser | Impens et al., 2010 | ||
| Wiskott-Aldrich syndrome protein family member 2 | Q8BH43 | 1-497 | peptide-Trp160+Lys-peptide | P | MS | Phe | Asp | Leu | Trp | Lys | Glu | Lys | Met | Impens et al., 2010 | ||
| Zinc finger SWIM domain-containing protein 4 | Q8C7B8 | 1-1101 | peptide-Arg852+Leu-peptide | P | MS | Thr | Leu | Leu | Arg | Leu | Gln | Leu | Asp | Impens et al., 2010 | ||
| Zyxin | Q62523 | 2-564 | peptide-Leu156+Asp-peptide | P | MS | Ser | Ser | Leu | Leu | Asp | Asp | Met | Thr | Impens et al., 2010 | ||
| Zyxin | Q62523 | 2-564 | peptide-Leu155+Leu-peptide | P | MS | Leu | Ser | Ser | Leu | Leu | Asp | Asp | Met | Impens et al., 2010 |
