Peptidase substrate index
A B C D E F G H I J K L M N O P Q R S T U V W X Y Z Num
Click on the Uniprot accession to show all cleavages stored in the MEROPS database for this substrate.
| Substrate name | UniProt ID | MEROPS ID | Peptidase name | Total cleavages |
|---|---|---|---|---|
| D(1A) dopamine receptor | P21728 | S01.280 | lysyl endopeptidase (bacteria) | 2 |
| D(1B) dopamine receptor | P21918 | C01.032 | cathepsin L | 1 |
| C01.060 | cathepsin B | 1 | ||
| D,D-heptose 1,7-bisphosphate phosphatase | Q8ZRM8 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| D-2-hydroxyglutarate dehydrogenase, mitochondrial | O23240 | M24.A14 | LCP55 (Arabidopsis thaliana) | 1 |
| D-3-phosphoglycerate dehydrogenase | O43175 | A02.001 | HIV-1 retropepsin | 2 |
| A32.002 | RC1339 g.p. (Rickettsia conorii) | 2 | ||
| C01.009 | cathepsin V | 3 | ||
| C01.018 | cathepsin F | 2 | ||
| C01.032 | cathepsin L | 3 | ||
| C01.034 | cathepsin S | 1 | ||
| C01.036 | cathepsin K | 6 | ||
| C01.060 | cathepsin B | 2 | ||
| M09.003 | bacterial collagenase H | 1 | ||
| M10.003 | matrix metallopeptidase-2 | 3 | ||
| M12.001 | astacin | 1 | ||
| M12.004 | meprin beta subunit | 2 | ||
| M12.033 | LAST_MAM peptidase (Limulus-type) | 1 | ||
| M35.004 | peptidyl-Lys metallopeptidase | 2 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 3 | ||
| S01.081 | kallikrein-related peptidase 15 | 1 | ||
| S01.135 | granzyme A | 1 | ||
| S01.151 | trypsin 1 | 22 | ||
| S01.217 | thrombin | 1 | ||
| S01.224 | hepsin | 1 | ||
| S01.269 | glutamyl endopeptidase I | 3 | ||
| S01.302 | matriptase | 2 | ||
| S01.308 | matriptase-2 | 2 | ||
| P0A9T0 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 | |
| Q61753 | A01.009 | cathepsin D | 2 | |
| A01.010 | cathepsin E | 1 | ||
| M10.003 | matrix metallopeptidase-2 | 1 | ||
| Q8ZM69 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 | |
| D-Ala-3-aminopentane amide | S12.002 | aminopeptidase DmpB | 1 | |
| D-Ala-Ala | S12.002 | aminopeptidase DmpB | 1 | |
| D-Ala-Ala-Ala | S12.002 | aminopeptidase DmpB | 1 | |
| D-Ala-anilide | S12.002 | aminopeptidase DmpB | 1 | |
| D-Ala-BzN | S12.002 | aminopeptidase DmpB | 1 | |
| D-Ala-D-Ala | M15.003 | van XYc peptidase | 1 | |
| M15.011 | vanX D-Ala-D-Ala dipeptidase | 1 | ||
| M15.012 | Aad peptidase | 1 | ||
| M19.007 | thermostable dipeptidase (Brevibacillus-type) | 1 | ||
| M55.001 | D-aminopeptidase DppA | 1 | ||
| S12.002 | aminopeptidase DmpB | 1 | ||
| D-Ala-D-Ala peptidase C | P24228 | S26.001 | signal peptidase I | 1 |
| D-Ala-D-Ala-D-Ala | M55.001 | D-aminopeptidase DppA | 1 | |
| S12.002 | aminopeptidase DmpB | 1 | ||
| D-Ala-D-Ala-D-Ala-D-Ala | M55.001 | D-aminopeptidase DppA | 1 | |
| S12.002 | aminopeptidase DmpB | 1 | ||
| D-Ala-D-Phe | M15.011 | vanX D-Ala-D-Ala dipeptidase | 1 | |
| D-Ala-D-Ser | M15.003 | van XYc peptidase | 1 | |
| D-Ala-gamma-amino-n-butyric acid-NH2 | S12.002 | aminopeptidase DmpB | 1 | |
| D-Ala-Gly | M55.001 | D-aminopeptidase DppA | 1 | |
| S12.002 | aminopeptidase DmpB | 1 | ||
| D-Ala-Gly-Gly | M55.001 | D-aminopeptidase DppA | 1 | |
| P01.001 | DmpA aminopeptidase | 1 | ||
| S12.002 | aminopeptidase DmpB | 1 | ||
| D-Ala-Leu | S33.001 | prolyl aminopeptidase | 1 | |
| D-Ala-NH2 | P01.001 | DmpA aminopeptidase | 1 | |
| P01.003 | BapF peptidase (Pseudomonas sp.) | 1 | ||
| S12.002 | aminopeptidase DmpB | 1 | ||
| D-Ala-NHPhNO2 | M55.001 | D-aminopeptidase DppA | 1 | |
| P01.001 | DmpA aminopeptidase | 2 | ||
| S12.002 | aminopeptidase DmpB | 1 | ||
| S12.008 | Pab87 peptidase | 1 | ||
| D-Ala-OMe | P01.001 | DmpA aminopeptidase | 1 | |
| S12.002 | aminopeptidase DmpB | 1 | ||
| D-alanine--D-alanine ligase A | P0A6J8 | S01.151 | trypsin 1 | 1 |
| D-alanine--D-alanine ligase B | Q8ZRU1 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| D-alanyl-D-alanine carboxypeptidase dacC | P08506 | S26.001 | signal peptidase I | 1 |
| D-alanyl-D-alanine endopeptidase | P0AFI5 | S01.151 | trypsin 1 | 1 |
| D-allose-binding periplasmic protein | P39265 | S01.151 | trypsin 1 | 4 |
| D-alpha-aminopimelyl-epsilon-D-Ala-D-Ala | S11.007 | penicillin-binding protein 4 (Neisseria-type) peptidase | 1 | |
| S12.001 | D-Ala-D-Ala carboxypeptidase B | 1 | ||
| S13.002 | D-Ala-D-Ala carboxypeptidase (Actinomadura-type) | 2 | ||
| D-aminoacyl-tRNA deacylase | Q9YBW7 | M04.001 | thermolysin | 2 |
| D-aminoacyl-tRNA deacylase 1 ECO:0000250|UniProtKB:Q8IIS0 | Q8TEA8 | C01.032 | cathepsin L | 1 |
| C01.060 | cathepsin B | 3 | ||
| D-aminopeptidase DppA | Q9YFC7 | M04.001 | thermolysin | 3 |
| D-cysteine desulfhydrase | P76316 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| Q8ZNT7 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 | |
| D-dopachrome decarboxylase | P30046 | C01.009 | cathepsin V | 1 |
| C01.032 | cathepsin L | 1 | ||
| C01.034 | cathepsin S | 1 | ||
| C01.036 | cathepsin K | 2 | ||
| C01.060 | cathepsin B | 3 | ||
| M04.001 | thermolysin | 2 | ||
| M10.003 | matrix metallopeptidase-2 | 1 | ||
| M12.001 | astacin | 1 | ||
| M12.004 | meprin beta subunit | 1 | ||
| S01.151 | trypsin 1 | 7 | ||
| S01.269 | glutamyl endopeptidase I | 1 | ||
| D-dopachrome decarboxylase-like protein | A6NHG4 | C01.009 | cathepsin V | 1 |
| C01.032 | cathepsin L | 1 | ||
| C01.036 | cathepsin K | 2 | ||
| C01.060 | cathepsin B | 3 | ||
| M10.003 | matrix metallopeptidase-2 | 1 | ||
| S01.151 | trypsin 1 | 2 | ||
| S01.269 | glutamyl endopeptidase I | 1 | ||
| D-erythro-7,8-dihydroneopterin triphosphate epimerase | P0AC19 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| D-erythrose-4-phosphate dehydrogenase | P0A9B6 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| D-galactose-binding periplasmic protein | P0AEE5 | M12.225 | ADAMTS5 peptidase | 1 |
| S01.151 | trypsin 1 | 7 | ||
| S26.001 | signal peptidase I | 1 | ||
| S41.011 | chlamydial protease-like activity factor | 6 | ||
| P44883 | S26.001 | signal peptidase I | 1 | |
| D-galactose-binding periplasmic protein precursor | P23905 | S26.001 | signal peptidase I | 1 |
| D-glucarate dehydratase | Q8ZMD9 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| D-Ile-Phe-Lys-NHPhNO2 | C01.099 | ervatamin B | 1 | |
| C01.116 | ervatamin C | 1 | ||
| C01.137 | ervatamin A | 1 | ||
| S01.075 | tryptase-6 | 1 | ||
| S01.108 | tryptase-5 | 1 | ||
| S01.303 | mast cell peptidase-11 (rodent) | 1 | ||
| D-Ile-Pro-Arg-NHPhNO2 | C01.099 | ervatamin B | 1 | |
| C01.116 | ervatamin C | 1 | ||
| C01.137 | ervatamin A | 1 | ||
| S01.347 | contortrixobin | 1 | ||
| D-lactate dehydrogenase | P06149 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| P30901 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 | |
| P52643 | M12.025 | ADAMTS15 peptidase | 1 | |
| M12.221 | ADAMTS4 peptidase | 1 | ||
| M12.225 | ADAMTS5 peptidase | 1 | ||
| Q9YEU4 | M04.001 | thermolysin | 4 | |
| D-lactate dehydrogenase [cytochrome] 2, mitochondrial | P46681 | M16.003 | mitochondrial processing peptidase beta-subunit | 1 |
| M24.026 | aminopeptidase P3 | 1 | ||
| D-Leu-D-Leu | U9B.004 | peptidyl-D-amino acid hydrolase (cephalopod) | 1 | |
| D-Leu-Leu | U9B.004 | peptidyl-D-amino acid hydrolase (cephalopod) | 1 | |
| D-Leu-NHPhNO2 | M55.001 | D-aminopeptidase DppA | 1 | |
| D-Leu-OBzl | S09.072 | puromycin hydrolase | 1 | |
| D-Leu-Ser-Thr-Arg-NHPhNO2 | C01.116 | ervatamin C | 1 | |
| C01.137 | ervatamin A | 1 | ||
| D-Leu-Thr-Arg-NHPhNO2 | S01.075 | tryptase-6 | 1 | |
| S01.108 | tryptase-5 | 1 | ||
| S01.303 | mast cell peptidase-11 (rodent) | 1 | ||
| D-Leu-Tyr | U9B.004 | peptidyl-D-amino acid hydrolase (cephalopod) | 1 | |
| D-Lys-Val-Phe-NHPhNO2 | S01.152 | chymotrypsin B | 1 | |
| S01.256 | chymopasin | 1 | ||
| D-Phe-D-Phe-D-Phe | S12.003 | alkaline D-peptidase | 1 | |
| D-Phe-D-Phe-D-Phe-D-Phe | S12.003 | alkaline D-peptidase | 1 | |
| D-Phe-D-Phe-D-Tyr | S12.003 | alkaline D-peptidase | 1 | |
| D-Phe-D-Phe-OMe | S12.003 | alkaline D-peptidase | 1 | |
| D-Phe-NHPhNO2 | M55.001 | D-aminopeptidase DppA | 1 | |
| D-Phe-OMe | S12.003 | alkaline D-peptidase | 1 | |
| D-Phe-Phe-Arg-NHMec | S01.159 | prostasin | 1 | |
| S9G.064 | archealysin | 1 | ||
| D-Phe-Phe-Arg-NHPhNO2 | C9G.030 | bothropain | 1 | |
| D-Phe-Pip-Arg-NHPhNO2 | S01.180 | platelet-aggregating venom peptidase | 1 | |
| S01.218 | protein C (activated) | 1 | ||
| S01.339 | cerastotin | 1 | ||
| S01.347 | contortrixobin | 1 | ||
| S01.353 | KN-BJ peptidase 1 (Bothrops jararaca) | 1 | ||
| S01.524 | kangshuanmei peptidase | 1 | ||
| S9G.062 | thrombocytin | 1 | ||
| S9G.087 | jerdonobin (Trimeresurus jerdonii) | 1 | ||
| S9G.088 | jerdofibrase (Trimeresurus jerdonii) | 1 | ||
| S9G.093 | MSP 1 endopeptidase (Bothrops moojeni) | 1 | ||
| S9G.094 | MSP 2 endopeptidase (Bothrops moojeni) | 1 | ||
| D-Phe-Pip-Arg-NHPhNO2 (S-2238) | S01.186 | snake venom plasminogen activator | 1 | |
| D-Pro-Leu-Arg-NHPhNO2 | S01.432 | rhombeobin (Lachesis muta rhombeata ) | 1 | |
| D-Pro-OBzl | S09.072 | puromycin hydrolase | 1 | |
| D-Pro-Phe-Arg-NHMec | S01.159 | prostasin | 1 | |
| D-Pro-Phe-Arg-NHPhNO2 | C9G.030 | bothropain | 1 | |
| S01.074 | marapsin | 1 | ||
| S01.122 | brachyurin-C | 1 | ||
| S01.151 | trypsin 1 | 1 | ||
| S01.161 | kallikrein-related peptidase 2 | 1 | ||
| S01.211 | coagulation factor XIIa | 1 | ||
| S01.353 | KN-BJ peptidase 1 (Bothrops jararaca) | 1 | ||
| S9G.087 | jerdonobin (Trimeresurus jerdonii) | 1 | ||
| S9G.088 | jerdofibrase (Trimeresurus jerdonii) | 1 | ||
| S9G.093 | MSP 1 endopeptidase (Bothrops moojeni) | 1 | ||
| S9G.094 | MSP 2 endopeptidase (Bothrops moojeni) | 1 | ||
| D-ribose pyranase | P04982 | M12.221 | ADAMTS4 peptidase | 1 |
| M12.225 | ADAMTS5 peptidase | 1 | ||
| S01.151 | trypsin 1 | 1 | ||
| D-ribose-binding periplasmic protein | P02925 | S26.001 | signal peptidase I | 1 |
| P0A2C5 | S26.001 | signal peptidase I | 1 | |
| P44737 | S26.001 | signal peptidase I | 1 | |
| D-Ser-Leu-Met-NHPhNO2 | S01.152 | chymotrypsin B | 1 | |
| S01.256 | chymopasin | 1 | ||
| D-Ser-NH2 | S12.002 | aminopeptidase DmpB | 1 | |
| D-serine dehydratase | P00926 | A02.011 | human endogenous retrovirus K retropepsin | 1 |
| S01.151 | trypsin 1 | 1 | ||
| S41.011 | chlamydial protease-like activity factor | 1 | ||
| D-tagatose-1,6-bisphosphate aldolase subunit gatY | P0C8J6 | C14.003 | caspase-3 | 1 |
| D-tagatose-1,6-bisphosphate aldolase subunit GatY | M12.225 | ADAMTS5 peptidase | 2 | |
| S01.151 | trypsin 1 | 1 | ||
| D-tagatose-1,6-bisphosphate aldolase subunit gatY | S01.269 | glutamyl endopeptidase I | 1 | |
| D-tagatose-1,6-bisphosphate aldolase subunit GatY | S41.011 | chlamydial protease-like activity factor | 7 | |
| D-tagatose-1,6-bisphosphate aldolase subunit GatZ | P0C8J8 | M12.025 | ADAMTS15 peptidase | 2 |
| M12.221 | ADAMTS4 peptidase | 3 | ||
| M12.225 | ADAMTS5 peptidase | 2 | ||
| S01.151 | trypsin 1 | 5 | ||
| S41.011 | chlamydial protease-like activity factor | 3 | ||
| D-Tyr-D-Phe-D-Phe | S12.003 | alkaline D-peptidase | 1 | |
| D-tyrosyl-tRNA(Tyr) deacylase 1 | Q8TEA8 | C01.032 | cathepsin L | 1 |
| C01.034 | cathepsin S | 1 | ||
| M04.001 | thermolysin | 4 | ||
| M10.005 | matrix metallopeptidase-3 | 2 | ||
| S01.151 | trypsin 1 | 1 | ||
| S01.269 | glutamyl endopeptidase I | 3 | ||
| D-Val-Gly-Arg-NHPhNO2 | S01.186 | snake venom plasminogen activator | 1 | |
| D-Val-Leu-Arg-AMC | C01.115 | fascipain B | 1 | |
| D-Val-Leu-Arg-NHMec | S01.159 | prostasin | 1 | |
| S01.405 | kallikrein 1 (Rattus sp.) | 1 | ||
| S9G.064 | archealysin | 1 | ||
| D-Val-Leu-Arg-NHPhNO2 | C9G.030 | bothropain | 1 | |
| S01.071 | kallikrein 1-related peptidase b9 (Mus musculus) | 1 | ||
| S01.122 | brachyurin-C | 1 | ||
| S01.170 | kallikrein 1-related peptidase b3 | 1 | ||
| S01.244 | kallikrein-related peptidase 8 | 1 | ||
| S01.347 | contortrixobin | 1 | ||
| S01.405 | kallikrein 1 (Rattus sp.) | 1 | ||
| S9G.093 | MSP 1 endopeptidase (Bothrops moojeni) | 1 | ||
| S9G.094 | MSP 2 endopeptidase (Bothrops moojeni) | 1 | ||
| D-Val-Leu-Arg-NHPhNO2 (S-2266) | S01.186 | snake venom plasminogen activator | 1 | |
| D-Val-Leu-Lys-NHMec | C01.046 | falcipain-2 | 1 | |
| D-Val-Leu-Lys-NHPhNO2 | C01.099 | ervatamin B | 1 | |
| C01.116 | ervatamin C | 1 | ||
| C01.137 | ervatamin A | 1 | ||
| C25.002 | gingipain K | 1 | ||
| C9G.030 | bothropain | 1 | ||
| S01.122 | brachyurin-C | 1 | ||
| S01.151 | trypsin 1 | 1 | ||
| S01.186 | snake venom plasminogen activator | 1 | ||
| S01.244 | kallikrein-related peptidase 8 | 1 | ||
| S9G.088 | jerdofibrase (Trimeresurus jerdonii) | 1 | ||
| S9G.093 | MSP 1 endopeptidase (Bothrops moojeni) | 1 | ||
| S9G.094 | MSP 2 endopeptidase (Bothrops moojeni) | 1 | ||
| D-Val-Leu-Lys-NPhNO2 | C01.081 | papain homologue (Dictyostelium-type) | 1 | |
| D-Val-Lys-Lys-Arg-NHMec | C14.033 | metacaspase-4 (Arabidopsis-type) | 1 | |
| C14.034 | metacaspase-9 (Arabidopsis-type) | 1 | ||
| D-Val-OBzl | S09.072 | puromycin hydrolase | 1 | |
| D-Val-Phe-Lys-NHPhNO2 | C25.002 | gingipain K | 1 | |
| D-xylose-binding periplasmic protein | P37387 | S26.001 | signal peptidase I | 1 |
| D1 protein | S41.002 | C-terminal processing peptidase-2 | 1 | |
| P07753 | S41.001 | C-terminal processing peptidase-1 | 1 | |
| P69560 | S41.001 | C-terminal processing peptidase-1 | 1 | |
| S41.002 | C-terminal processing peptidase-2 | 1 | ||
| Dabcyl-Ala-Pro-Ala-Lys-Gln-Leu-Leu-Asp(EDANS)-Phe-Asp-Leu-Leu-Lys | C03.008 | foot-and-mouth disease virus picornain 3C | 1 | |
| DABCYL-Arg-Arg-Ala-EDANS | A26.003 | plasminogen activator Pla | 1 | |
| DABCYL-Arg-Arg-Cys-EDANS | A26.003 | plasminogen activator Pla | 1 | |
| DABCYL-Arg-Arg-Gly-EDANS | A26.003 | plasminogen activator Pla | 1 | |
| DABCYL-Arg-Arg-Ile-EDANS | A26.003 | plasminogen activator Pla | 1 | |
| DABCYL-Arg-Arg-Ser-EDANS | A26.003 | plasminogen activator Pla | 1 | |
| DABCYL-Arg-Arg-Thr-EDANS | A26.003 | plasminogen activator Pla | 1 | |
| DABCYL-Arg-Arg-Val-EDANS | A26.003 | plasminogen activator Pla | 1 | |
| Dabcyl-Arg-Tyr-Val-Arg-Ile-Leu-Ser-Glu-Thr-Glu-EDANS | A01.075 | plasmepsin-5 (Plasmodium sp.) | 1 | |
| Dabcyl-Arg-Val-Ser-Arg-Arg-Leu-Ala-Glu-Glu-Pro-Glu-EDANS | A01.098 | ASP5 g.p. (Toxoplasma gondii) | 1 | |
| Dabcyl-FKFLGKE-EDANS | M04.001 | thermolysin | 2 | |
| Dabcyl-GABA-Glu-Arg-Met-Phe-Leu-Ser-Phe-Pro-GABA-5-(2-aminoethylaminio)-1-naphthalene-sulfonic acid | A01.022 | plasmepsin-1 | 1 | |
| A01.023 | plasmepsin-2 | 1 | ||
| A01.059 | plasmepsin-4 | 1 | ||
| Dabcyl-GABA-Glu-Arg-Met-Phe-Leu-Ser-Phe-Pro-GABA-EDANS | A01.043 | histoaspartic peptidase (Plasmodium falciparum) | 1 | |
| Dabcyl-Glu-His-Val-Lys-Leu-Val-Glu-EDANS | A01.038 | candiparapsin | 1 | |
| A01.076 | Sapp2p peptidase (Candida parapsilosis) | 1 | ||
| Dabcyl-Glu-Val-Tyr-Ala-Val-Glu-Ser-Edans | M10.063 | PrtA peptidase (Photorhabdus-type) | 1 | |
| Dabcyl-Gly-Asn-Lys-Arg-Thr-Leu-Ala-Gln-Lys-Gln-Gly-EDANS | A01.075 | plasmepsin-5 (Plasmodium sp.) | 1 | |
| Dabcyl-Gly-Leu-Arg-Thr-Gln-Ser-Phe-Ser-Edans | M10.063 | PrtA peptidase (Photorhabdus-type) | 1 | |
| Dabcyl-KTSAVLQSGFRKME-Edans | C03.014 | human enterovirus 71 3C peptidase | 1 | |
| Dabcyl-Leu-Ala-Arg-Val-Glu(EDANS) | M43.007 | ulilysin (Methanosarcina acetivorans) | 1 | |
| Dabcyl-Leu-Ala-Gln-Ala-HPh-Arg-Ser-Lys(Fam)-NH2 | M10.001 | matrix metallopeptidase-1 | 1 | |
| M10.002 | matrix metallopeptidase-8 | 1 | ||
| M10.003 | matrix metallopeptidase-2 | 1 | ||
| M10.004 | matrix metallopeptidase-9 | 1 | ||
| M10.005 | matrix metallopeptidase-3 | 1 | ||
| M10.013 | matrix metallopeptidase-13 | 1 | ||
| M10.014 | membrane-type matrix metallopeptidase-1 | 1 | ||
| M12.208 | ADAM8 peptidase | 1 | ||
| M12.210 | ADAM10 peptidase | 1 | ||
| M12.212 | ADAM12 peptidase | 1 | ||
| M12.217 | ADAM17 peptidase | 1 | ||
| Dabcyl-Leu-Asn-Lys-Arg-Leu-Leu-His-Glu-Thr-Gln-EDANS | A01.075 | plasmepsin-5 (Plasmodium sp.) | 1 | |
| Dabcyl-Pro-Arg-Ala-Ala-Ala-hPhe-Thr-Ser-Pro-Lys(FAM)-NH2 | M10.001 | matrix metallopeptidase-1 | 1 | |
| M10.002 | matrix metallopeptidase-8 | 1 | ||
| M10.003 | matrix metallopeptidase-2 | 1 | ||
| M10.004 | matrix metallopeptidase-9 | 1 | ||
| M10.005 | matrix metallopeptidase-3 | 1 | ||
| M10.009 | matrix metallopeptidase-12 | 1 | ||
| M10.013 | matrix metallopeptidase-13 | 1 | ||
| M10.014 | membrane-type matrix metallopeptidase-1 | 1 | ||
| M12.208 | ADAM8 peptidase | 1 | ||
| M12.209 | ADAM9 peptidase | 1 | ||
| M12.210 | ADAM10 peptidase | 1 | ||
| M12.217 | ADAM17 peptidase | 1 | ||
| Dabcyl-Pro-Cha-Gly-Cys(Me)-His-Ala-Lys(Fam)-NH2 | M10.001 | matrix metallopeptidase-1 | 1 | |
| M10.003 | matrix metallopeptidase-2 | 1 | ||
| M10.004 | matrix metallopeptidase-9 | 1 | ||
| M10.005 | matrix metallopeptidase-3 | 1 | ||
| M10.013 | matrix metallopeptidase-13 | 1 | ||
| M10.014 | membrane-type matrix metallopeptidase-1 | 1 | ||
| M12.208 | ADAM8 peptidase | 1 | ||
| M12.210 | ADAM10 peptidase | 1 | ||
| M12.212 | ADAM12 peptidase | 1 | ||
| M12.217 | ADAM17 peptidase | 1 | ||
| Dabcyl-Pro-Leu-Phe-Ala-Glu-Arg-EDANS | C02.001 | calpain-1 | 1 | |
| Dabcyl-Pro-Lys-Val-Glu-Leu-Thr-Gly-Glu-EDANS | A01.038 | candiparapsin | 1 | |
| A01.076 | Sapp2p peptidase (Candida parapsilosis) | 1 | ||
| DABCYL-RRI-EDANS | A26.003 | plasminogen activator Pla | 1 | |
| DABCYL-RRI-OH | A26.003 | plasminogen activator Pla | 1 | |
| DABCYL-RRIN-EDANS | A26.003 | plasminogen activator Pla | 1 | |
| DABCYL-RRIN-OH | A26.003 | plasminogen activator Pla | 1 | |
| DABCYL-RRINR-Glu(EDANS)-NH2 | A26.003 | plasminogen activator Pla | 1 | |
| DABCYL-RRINR-Glu-EDANS | A26.003 | plasminogen activator Pla | 1 | |
| DABCYL-RRINR-OH | A26.003 | plasminogen activator Pla | 1 | |
| Dabcyl-Ser-Phe-EDANS | M04.005 | pseudolysin | 1 | |
| Dabcyl-Ser-Pro-Leu-Ala-Gln-Ala-Val-Arg-Ser-Ser-Lys(FAM)-NH2 | M10.001 | matrix metallopeptidase-1 | 1 | |
| M10.002 | matrix metallopeptidase-8 | 1 | ||
| M10.003 | matrix metallopeptidase-2 | 1 | ||
| M10.004 | matrix metallopeptidase-9 | 1 | ||
| M10.005 | matrix metallopeptidase-3 | 1 | ||
| M10.009 | matrix metallopeptidase-12 | 1 | ||
| M10.013 | matrix metallopeptidase-13 | 1 | ||
| M10.014 | membrane-type matrix metallopeptidase-1 | 1 | ||
| M12.208 | ADAM8 peptidase | 1 | ||
| M12.210 | ADAM10 peptidase | 1 | ||
| M12.217 | ADAM17 peptidase | 1 | ||
| DABCYL-TPLKSPPPSPR-EDANS | C02.014 | calpain A | 1 | |
| C02.015 | calpain B | 1 | ||
| Dabcyl-Tyr-Val-Ala-Asp-Ala-Pro-Val-EDANS | C14.001 | caspase-1 | 1 | |
| dabocetin subunit alpha | Q38L02 | XS26.001 | signal peptidase complex (animal) | 1 |
| Dachshund homolog 1 | Q96SG4 | C01.036 | cathepsin K | 1 |
| dansyl-Ala-Tyr-Leu-Lys-Lys-Trp-Val-NH2 | M08.001 | leishmanolysin | 1 | |
| dansyl-D-Tyr-Val-NH2 | S10.002 | serine carboxypeptidase A | 1 | |
| dansyl-Pro-Leu-Ala-Leu-Trp-Ala-Arg-NH2 | M10.007 | matrix metallopeptidase-11 | 1 | |
| Dapper homolog 1 | Q9NYF0 | C01.009 | cathepsin V | 1 |
| Dapper homolog 2 | Q5SW24 | C01.009 | cathepsin V | 1 |
| C01.018 | cathepsin F | 1 | ||
| M35.004 | peptidyl-Lys metallopeptidase | 2 | ||
| Dapper homolog 3 | Q96B18 | C01.009 | cathepsin V | 1 |
| S01.280 | lysyl endopeptidase (bacteria) | 2 | ||
| DATAEEEGEMYE(E)DDDEESEAQGPK | M14.025 | cytosolic carboxypeptidase 5 | 1 | |
| M14.028 | cytosolic carboxypeptidase 1 | 1 | ||
| DATAEEEGEMYE(EE)DDDEESEAQGPK | M14.025 | cytosolic carboxypeptidase 5 | 1 | |
| M14.028 | cytosolic carboxypeptidase 1 | 1 | ||
| DATAEEEGEMYE(EEE)DDDEESEAQGPK | M14.025 | cytosolic carboxypeptidase 5 | 1 | |
| M14.028 | cytosolic carboxypeptidase 1 | 1 | ||
| DATAEEEGEMYE(EEEE)DDDEESEAQGPK | M14.025 | cytosolic carboxypeptidase 5 | 1 | |
| DAZ-associated protein 1 | Q96EP5 | C01.009 | cathepsin V | 1 |
| C01.018 | cathepsin F | 2 | ||
| C01.032 | cathepsin L | 2 | ||
| C01.034 | cathepsin S | 1 | ||
| C01.036 | cathepsin K | 4 | ||
| C01.060 | cathepsin B | 1 | ||
| C13.004 | legumain, animal-type | 2 | ||
| M09.002 | collagenase G/A (Clostridium histolyticum) | 1 | ||
| M09.003 | bacterial collagenase H | 1 | ||
| M10.005 | matrix metallopeptidase-3 | 1 | ||
| S01.151 | trypsin 1 | 3 | ||
| Q9JII5 | A01.010 | cathepsin E | 1 | |
| DAZ-associated protein 2 | Q9DCP9 | A01.010 | cathepsin E | 1 |
| DBDY-(INH)(2) (N,N'-diBoc-dityrosine-isoniazide) | C01.002 | chymopapain | 1 | |
| DBIRD complex subunit KIAA1967 | Q8N163 | S01.136 | granzyme B, rodent-type | 1 |
| S01.139 | granzyme M | 2 | ||
| DBIRD complex subunit ZNF326 | Q5BKZ1 | S01.139 | granzyme M | 2 |
| Q7Z638 | C01.036 | cathepsin K | 2 | |
| DBN1 drebrin 1 | Q16643 | C14.003 | caspase-3 | 1 |
| C14.005 | caspase-6 | 3 | ||
| DCC-interacting protein 13-alpha | Q9UKG1 | C14.005 | caspase-6 | 1 |
| DCD-1 | P81605 | XS26.001 | signal peptidase complex (animal) | 1 |
| DCN protein | Q6FH10 | M10.008 | matrix metallopeptidase-7 | 2 |
| DCN1-like protein 1 | Q96GG9 | M35.004 | peptidyl-Lys metallopeptidase | 2 |
| S01.151 | trypsin 1 | 1 | ||
| DCN1-like protein 1 ECO:0000305 | C01.009 | cathepsin V | 1 | |
| C01.018 | cathepsin F | 2 | ||
| C01.032 | cathepsin L | 1 | ||
| C01.036 | cathepsin K | 1 | ||
| DCN1-like protein 2 ECO:0000305 | Q6PH85 | C01.018 | cathepsin F | 1 |
| C01.032 | cathepsin L | 1 | ||
| C01.036 | cathepsin K | 1 | ||
| DCN1-like protein 5 | Q9BTE7 | M10.005 | matrix metallopeptidase-3 | 1 |
| DCN1-like protein 5 ECO:0000305 | C01.060 | cathepsin B | 1 | |
| dCTP deaminase | P28248 | S01.151 | trypsin 1 | 1 |
| dCTP pyrophosphatase 1 | Q9H773 | M10.003 | matrix metallopeptidase-2 | 1 |
| M10.005 | matrix metallopeptidase-3 | 2 | ||
| S01.001 | chymotrypsin A (cattle-type) | 1 | ||
| S01.151 | trypsin 1 | 5 | ||
| dCTP pyrophosphatase 1 ECO:0000305 | C01.009 | cathepsin V | 1 | |
| C01.060 | cathepsin B | 1 | ||
| DDB1- and CUL4-associated factor 8 | Q5TAQ9 | M35.004 | peptidyl-Lys metallopeptidase | 2 |
| DDX10 protein | Q86VR6 | S01.151 | trypsin 1 | 1 |
| S01.269 | glutamyl endopeptidase I | 1 | ||
| DDX19-like protein variant | Q59FQ9 | A02.001 | HIV-1 retropepsin | 1 |
| S01.151 | trypsin 1 | 5 | ||
| DDX39 protein | Q8N5M0 | S01.151 | trypsin 1 | 4 |
| DEAD | Q59EC7 | S01.151 | trypsin 1 | 1 |
| S01.269 | glutamyl endopeptidase I | 1 | ||
| dEAD-box ATP-dependent RNA helicase 53, mitochondrial | Q9LUW5 | M03.A12 | OCT1 (Arabidopsis thaliana) | 6 |
| dEAD-box ATP-dependent RNA helicase 9, mitochondrial | Q9LUW6 | M03.A12 | OCT1 (Arabidopsis thaliana) | 1 |
| Death domain-associated protein 6 | Q9BWI3 | C01.018 | cathepsin F | 1 |
| C01.036 | cathepsin K | 1 | ||
| Q9UER7 | M10.005 | matrix metallopeptidase-3 | 2 | |
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| S01.139 | granzyme M | 6 | ||
| Death-associated protein 1 | P51397 | C13.004 | legumain, animal-type | 1 |
| Q91XC8 | A01.009 | cathepsin D | 1 | |
| Death-associated protein 1 ECO:0000303|PubMed:7828849 | P51397 | C01.018 | cathepsin F | 1 |
| C01.036 | cathepsin K | 2 | ||
| Death-associated protein kinase 1 | P53355 | S01.139 | granzyme M | 2 |
| Death-associated protein kinase 2 | Q9UIK4 | S01.139 | granzyme M | 2 |
| Death-associated protein kinase 3 | O43293 | S01.139 | granzyme M | 2 |
| death-inducer obliterator 1 | Q8C9B9 | S01.010 | granzyme B (Homo sapiens-type) | 1 |
| S01.136 | granzyme B, rodent-type | 1 | ||
| S01.151 | trypsin 1 | 1 | ||
| Death-inducer obliterator 1 | Q9BTC0 | S01.010 | granzyme B (Homo sapiens-type) | 1 |
| Q9NTU8 | C14.005 | caspase-6 | 1 | |
| Q9UFB6 | C01.036 | cathepsin K | 2 | |
| C01.060 | cathepsin B | 1 | ||
| Decanoyl-Leu-Thr-Asn-Thr-Ala-Lys-Ala-Ala-Ser-Lys-Ile-Asp-Asp-OH | S26.016 | SpsB signal peptidase | 1 | |
| Decanoyl-Leu-Thr-Asn-Thr-Ala-Lys-Ala-Glu-Ser-Lys-Ile-Asp-Asp-OH | S26.016 | SpsB signal peptidase | 1 | |
| Decanoyl-Leu-Thr-Pro-Thr-Ala-Arg-Ala-Ala-Ser-Lys-Ile-Asp-Asp-OH | S26.016 | SpsB signal peptidase | 1 | |
| Decanoyl-Leu-Thr-Pro-Thr-Ala-Asn-Ala-Ala-Ser-Lys-Ile-Asp-Asp-OH | S26.016 | SpsB signal peptidase | 1 | |
| Decanoyl-Leu-Thr-Pro-Thr-Ala-Asp-Ala-Ala-Ser-Lys-Ile-Asp-Asp-OH | S26.016 | SpsB signal peptidase | 1 | |
| Decanoyl-Leu-Thr-Pro-Thr-Ala-Leu-Ala-Ala-Ser-Lys-Ile-Asp-Asp-OH | S26.016 | SpsB signal peptidase | 1 | |
| Decanoyl-Leu-Thr-Pro-Thr-Ala-Lys-Ala-Ala-Ser-Lys-Ile-Asp-Asp-OH | S26.001 | signal peptidase I | 1 | |
| S26.016 | SpsB signal peptidase | 2 | ||
| Decanoyl-Leu-Thr-Pro-Thr-Gln-Ala-Lys-Ala-Ala-Ser-Lys-Ile-Asp-Asp-OH | S26.016 | SpsB signal peptidase | 1 | |
| decapeptide 3 | Q9GQV7 | XS26.001 | signal peptidase complex (animal) | 1 |
| decorin | P07585 | M10.003 | matrix metallopeptidase-2 | 1 |
| M10.005 | matrix metallopeptidase-3 | 1 | ||
| M10.009 | matrix metallopeptidase-12 | 2 | ||
| M10.013 | matrix metallopeptidase-13 | 1 | ||
| M12.225 | ADAMTS5 peptidase | 2 | ||
| Decorin | P28654 | M10.003 | matrix metallopeptidase-2 | 3 |
| Decorin precursor | P07585 | M10.003 | matrix metallopeptidase-2 | 1 |
| M10.005 | matrix metallopeptidase-3 | 1 | ||
| decorin precursor | M10.008 | matrix metallopeptidase-7 | 3 | |
| M12.005 | procollagen C-peptidase | 1 | ||
| Decreased expression in renal and prostate cancer protein ECO:0000305 | P0CG12 | C01.009 | cathepsin V | 1 |
| C01.018 | cathepsin F | 2 | ||
| C01.060 | cathepsin B | 1 | ||
| Dedicator of cytokinesis protein 1 | Q14185 | M35.004 | peptidyl-Lys metallopeptidase | 4 |
| dedicator of cytokinesis protein 2 | Q8C3J5 | S01.010 | granzyme B (Homo sapiens-type) | 1 |
| S01.151 | trypsin 1 | 1 | ||
| Dedicator of cytokinesis protein 2 | Q92608 | C01.036 | cathepsin K | 7 |
| dedicator of cytokinesis protein 2 | S01.135 | granzyme A | 1 | |
| Dedicator of cytokinesis protein 4 | Q8N1I0 | M35.004 | peptidyl-Lys metallopeptidase | 2 |
| Dedicator of cytokinesis protein 5 | Q9H7D0 | C14.001 | caspase-1 | 1 |
| Dedicator of cytokinesis protein 7 | Q8TB82 | C14.005 | caspase-6 | 1 |
| Q96N67 | S01.151 | trypsin 1 | 2 | |
| Dedicator of cytokinesis protein 8 | Q8NF50 | S01.280 | lysyl endopeptidase (bacteria) | 2 |
| Q8TEP1 | A32.002 | RC1339 g.p. (Rickettsia conorii) | 1 | |
| Q8WUY2 | C01.060 | cathepsin B | 1 | |
| DEFB1 defensin, beta 1 preproprotein | P60022 | M10.057 | mirabilysin | 10 |
| defensin J1-1 | Q43413 | S26.010 | signalase (animal) 21 kDa component | 1 |
| defensin Lc-def | B3F051 | S26.010 | signalase (animal) 21 kDa component | 1 |
| defensin-1 | Q6GU94 | XS26.001 | signal peptidase complex (animal) | 1 |
| defensin-5 | Q01523 | S01.151 | trypsin 1 | 2 |
| S01.258 | trypsin-2 type A | 2 | ||
| Defensin-5 precursor | S01.251 | kallikrein-related peptidase 4 | 1 | |
| defensin-related cryptdin-2 | P28309 | M10.008 | matrix metallopeptidase-7 | 2 |
| defensin-related cryptdin-4 | P28311 | M10.008 | matrix metallopeptidase-7 | 3 |
| defensin-related cryptdin-6/12 | P50704 | M10.008 | matrix metallopeptidase-7 | 3 |
| Deg1 chloroplast peptidase | O22609 | S26.008 | thylakoidal processing peptidase | 1 |
| DegP peptidase | P0C0V0 | S01.273 | DegP peptidase | 2 |
| S26.001 | signal peptidase I | 1 | ||
| DegQ peptidase | P39099 | S26.001 | signal peptidase I | 1 |
| Dehydrogenase/reductase SDR family member 11 | Q3U0B3 | A01.010 | cathepsin E | 1 |
| dehydrogenase/reductase SDR family member 2 | Q13268 | M10.003 | matrix metallopeptidase-2 | 1 |
| M16.003 | mitochondrial processing peptidase beta-subunit | 1 | ||
| S01.151 | trypsin 1 | 1 | ||
| Dehydrogenase/reductase SDR family member 7 | Q9Y394 | S01.010 | granzyme B (Homo sapiens-type) | 1 |
| Dehydrogenase/reductase SDR family member 7B | Q6IAN0 | M35.004 | peptidyl-Lys metallopeptidase | 2 |
| Dehydrogenase/reductase SDR family member 9 precursor | Q9BPW9 | M35.004 | peptidyl-Lys metallopeptidase | 2 |
| Deleted in bladder cancer protein 1 precursor | O60477 | M35.004 | peptidyl-Lys metallopeptidase | 1 |
| S01.280 | lysyl endopeptidase (bacteria) | 1 | ||
| Deleted in lung and esophageal cancer protein 1 | Q9Y238 | C01.032 | cathepsin L | 1 |
| delta CG3619-PA, isoform A | A4V346 | M12.211 | Kuzbanian peptidase (non-mammalian) | 2 |
| Delta sleep-inducing peptide | P01158 | S10.UPW | family S10 unassigned peptidases | 5 |
| Delta(14)-sterol reductase LBR | Q14739 | C01.060 | cathepsin B | 1 |
| delta(24)-sterol reductase | Q15392 | S29.001 | hepacivirin | 1 |
| Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial | Q13011 | C01.034 | cathepsin S | 1 |
| S01.151 | trypsin 1 | 5 | ||
| Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial ECO:0000305 | C01.036 | cathepsin K | 2 | |
| C01.060 | cathepsin B | 1 | ||
| Delta-1-pyrroline-5-carboxylate dehydrogenase | Q9YDW2 | M04.001 | thermolysin | 18 |
| delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial | P07275 | M16.003 | mitochondrial processing peptidase beta-subunit | 1 |
| M24.026 | aminopeptidase P3 | 1 | ||
| Delta-1-pyrroline-5-carboxylate synthase | P54886 | C01.034 | cathepsin S | 1 |
| S01.151 | trypsin 1 | 3 | ||
| Q5T567 | C01.009 | cathepsin V | 1 | |
| C01.036 | cathepsin K | 4 | ||
| Delta-aminolevulinic acid dehydratase | P0ACB2 | A02.011 | human endogenous retrovirus K retropepsin | 1 |
| M12.221 | ADAMTS4 peptidase | 1 | ||
| M12.225 | ADAMTS5 peptidase | 1 | ||
| delta-aminolevulinic acid dehydratase | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 | |
| Delta-aminolevulinic acid dehydratase | S41.011 | chlamydial protease-like activity factor | 1 | |
| P13716 | C01.060 | cathepsin B | 1 | |
| Q9Y9I8 | M04.001 | thermolysin | 2 | |
| delta-like 1 | Q61483 | M12.210 | ADAM10 peptidase | 1 |
| Delta-like protein 1 | O00548 | S01.010 | granzyme B (Homo sapiens-type) | 1 |
| delta-like protein 4 | Q9NR61 | XS26.001 | signal peptidase complex (animal) | 1 |
| DENN domain-containing protein 10 ECO:0000305 | Q8TCE6 | C01.036 | cathepsin K | 1 |
| DENN domain-containing protein 1C | Q8IV53 | S01.280 | lysyl endopeptidase (bacteria) | 2 |
| DENN domain-containing protein 2C | Q68D51 | S01.280 | lysyl endopeptidase (bacteria) | 2 |
| DENN domain-containing protein 4C | Q5VZ89 | M35.004 | peptidyl-Lys metallopeptidase | 2 |
| Density-regulated protein | O43583 | C01.009 | cathepsin V | 6 |
| C01.018 | cathepsin F | 1 | ||
| C01.032 | cathepsin L | 5 | ||
| C01.034 | cathepsin S | 3 | ||
| C01.036 | cathepsin K | 5 | ||
| C01.060 | cathepsin B | 3 | ||
| C14.004 | caspase-7 | 1 | ||
| M04.001 | thermolysin | 2 | ||
| M10.005 | matrix metallopeptidase-3 | 1 | ||
| M12.002 | meprin alpha subunit | 1 | ||
| M12.004 | meprin beta subunit | 1 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 2 | ||
| S01.139 | granzyme M | 2 | ||
| density-regulated protein | S01.151 | trypsin 1 | 3 | |
| Density-regulated protein | S01.269 | glutamyl endopeptidase I | 1 | |
| Denticleless protein homolog | Q9NZJ0 | C14.005 | caspase-6 | 1 |
| Dentin matrix acidic phosphoprotein 1 | O55188 | M12.018 | mammalian-type tolloid-like 2 protein | 1 |
| P98193 | M10.003 | matrix metallopeptidase-2 | 3 | |
| Q13316 | A32.002 | RC1339 g.p. (Rickettsia conorii) | 1 | |
| dentin matrix acidic phosphoprotein 1 | M12.016 | vertebrate tolloid-like 1 protein | 1 | |
| dentin matrix acidic phosphoprotein 1 precursor | O55188 | M12.005 | procollagen C-peptidase | 1 |
| dentin sialophosphoprotein | P97399 | M10.004 | matrix metallopeptidase-9 | 3 |
| Dentin sialophosphoprotein precursor | Q9NZW4 | M35.004 | peptidyl-Lys metallopeptidase | 2 |
| dentin sialoprotein | Q62598 | XS26.001 | signal peptidase complex (animal) | 1 |
| deoxyadenosine kinase | Q74HC3 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| Deoxycytidine kinase | P27707 | C01.036 | cathepsin K | 3 |
| S01.151 | trypsin 1 | 2 | ||
| Deoxycytidylate deaminase | P32321 | C01.009 | cathepsin V | 1 |
| C01.060 | cathepsin B | 1 | ||
| M04.001 | thermolysin | 1 | ||
| M10.005 | matrix metallopeptidase-3 | 2 | ||
| S01.151 | trypsin 1 | 4 | ||
| S01.269 | glutamyl endopeptidase I | 1 | ||
| deoxyguanosine kinase | Q74HC2 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| deoxyguanosinetriphosphate triphosphohydrolase | P15723 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| Deoxyguanosinetriphosphate triphosphohydrolase | S41.011 | chlamydial protease-like activity factor | 1 | |
| Deoxyhypusine hydroxylase ECO:0000255|HAMAP-Rule:MF_03101, ECO:0000303|PubMed:16533814 | Q9BU89 | S01.081 | kallikrein-related peptidase 15 | 1 |
| Deoxyhypusine hydroxylase ECO:0000255|HAMAP-Rule:MF_03101 | C14.005 | caspase-6 | 1 | |
| Deoxyhypusine synthase | P49366 | M10.005 | matrix metallopeptidase-3 | 1 |
| deoxyhypusine synthase | S01.151 | trypsin 1 | 6 | |
| Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 | Q9Y3Z3 | A32.002 | RC1339 g.p. (Rickettsia conorii) | 1 |
| M09.003 | bacterial collagenase H | 1 | ||
| S01.151 | trypsin 1 | 3 | ||
| Deoxynucleotidyltransferase terminal-interacting protein 2 | Q5QJE6 | C01.036 | cathepsin K | 1 |
| deoxyribodipyrimidine photo-lyase | P05327 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| deoxyribonuclease-1 | O18998 | XS26.001 | signal peptidase complex (animal) | 1 |
| O42446 | XS26.001 | signal peptidase complex (animal) | 1 | |
| P00639 | XS26.001 | signal peptidase complex (animal) | 1 | |
| P11936 | XS26.001 | signal peptidase complex (animal) | 1 | |
| P24855 | XS26.001 | signal peptidase complex (animal) | 1 | |
| Deoxyribose-phosphate aldolase | P0A6L0 | C14.003 | caspase-3 | 1 |
| M12.221 | ADAMTS4 peptidase | 1 | ||
| M12.225 | ADAMTS5 peptidase | 1 | ||
| S01.151 | trypsin 1 | 4 | ||
| S41.011 | chlamydial protease-like activity factor | 3 | ||
| Q9Y948 | M04.001 | thermolysin | 5 | |
| Derlin-1 | Q9BUN8 | C13.004 | legumain, animal-type | 1 |
| S01.151 | trypsin 1 | 2 | ||
| Derlin-2 | Q9GZP9 | C13.004 | legumain, animal-type | 1 |
| Dermal papilla-derived protein 6 | Q8TE02 | C01.032 | cathepsin L | 1 |
| dermatopontin | P19427 | XS26.001 | signal peptidase complex (animal) | 1 |
| dermcidin | P81605 | A01.009 | cathepsin D | 2 |
| Dermcidin | S01.139 | granzyme M | 1 | |
| Dermokine | Q6E0U4 | M12.004 | meprin beta subunit | 1 |
| Q6E0U5 | S01.081 | kallikrein-related peptidase 15 | 1 | |
| dermokine | Q6P253 | M10.006 | matrix metallopeptidase-10 (Homo sapiens-type) | 2 |
| dermokine, Isoform 15 | Q6E0U4-15 | XS26.001 | signal peptidase complex (animal) | 1 |
| Dermorphin-1 | P05422 | C01.040 | cathepsin H | 1 |
| des(Asp1)angiotensin-1 | P01019 | M01.001 | aminopeptidase N | 1 |
| des-Arg bradykinin | O08677 | M02.006 | angiotensin-converting enzyme-2 | 1 |
| des-Arg9-Bradykinin | P01042 | C01.036 | cathepsin K | 1 |
| desert hedgehog protein | O43323 | C46.004 | Desert hedgehog protein | 1 |
| Desert hedgehog protein | Q61488 | C46.004 | Desert hedgehog protein | 1 |
| desmin | P17661 | S01.151 | trypsin 1 | 2 |
| Desmin | P31001 | A01.010 | cathepsin E | 1 |
| desmin | C14.005 | caspase-6 | 1 | |
| M10.003 | matrix metallopeptidase-2 | 1 | ||
| Desmin | Q8NEU6 | S01.072 | matriptase-3 | 1 |
| S01.308 | matriptase-2 | 1 | ||
| Desmocollin-2 precursor | Q02487-2 | S01.251 | kallikrein-related peptidase 4 | 1 |
| desmocollin-3 | P55850 | M10.006 | matrix metallopeptidase-10 (Homo sapiens-type) | 1 |
| Desmocollin-3 | Q14574 | M12.002 | meprin alpha subunit | 1 |
| M12.004 | meprin beta subunit | 1 | ||
| Desmoglein-1 | Q02413 | C14.003 | caspase-3 | 1 |
| S01.017 | kallikrein-related peptidase 5 | 3 | ||
| S01.029 | kallikrein-related peptidase 14 | 1 | ||
| S01.160 | kallikrein 1 | 2 | ||
| S01.236 | kallikrein-related peptidase 6 | 2 | ||
| desmoglein-1 | S08.071 | furin | 1 | |
| Desmoglein-1 precursor | S01.251 | kallikrein-related peptidase 4 | 1 | |
| Desmoglein-2 | Q14126 | C14.005 | caspase-6 | 1 |
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| S01.269 | glutamyl endopeptidase I | 2 | ||
| desmoglein-3 | P32926 | C14.003 | caspase-3 | 1 |
| Desmoglein-3 | M12.002 | meprin alpha subunit | 2 | |
| Desmoglein-3 precursor | M12.002 | meprin alpha subunit | 1 | |
| M12.004 | meprin beta subunit | 1 | ||
| S01.251 | kallikrein-related peptidase 4 | 1 | ||
| S08.071 | furin | 1 | ||
| Desmoglein-4 | Q86SJ6 | M12.002 | meprin alpha subunit | 1 |
| M12.004 | meprin beta subunit | 1 | ||
| Desmoplakin | P15924 | C01.032 | cathepsin L | 2 |
| C01.036 | cathepsin K | 1 | ||
| M12.002 | meprin alpha subunit | 2 | ||
| M12.004 | meprin beta subunit | 5 | ||
| S01.151 | trypsin 1 | 3 | ||
| desmoplakin isoform DP2 | P15924-2 | S01.151 | trypsin 1 | 1 |
| S01.269 | glutamyl endopeptidase I | 1 | ||
| Destrin | P60981 | C01.009 | cathepsin V | 1 |
| C01.018 | cathepsin F | 2 | ||
| C01.032 | cathepsin L | 2 | ||
| C01.034 | cathepsin S | 2 | ||
| C01.036 | cathepsin K | 8 | ||
| M04.001 | thermolysin | 2 | ||
| M10.005 | matrix metallopeptidase-3 | 1 | ||
| destrin | S01.151 | trypsin 1 | 7 | |
| Destrin | S01.269 | glutamyl endopeptidase I | 1 | |
| Q9R0P5 | A01.009 | cathepsin D | 2 | |
| M10.003 | matrix metallopeptidase-2 | 2 | ||
| DET1- and DDB1-associated protein 1 | Q9BW61 | C13.004 | legumain, animal-type | 1 |
| DET1- and DDB1-associated protein 1 ECO:0000303|PubMed:17452440 | C01.009 | cathepsin V | 1 | |
| C01.032 | cathepsin L | 1 | ||
| C01.036 | cathepsin K | 1 | ||
| dethiobiotin synthetase | P13000 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| Deubiquitinase OTUD6B ECO:0000305 | Q8N6M0 | C01.036 | cathepsin K | 1 |
| Deubiquitinating protein VCIP135 | Q96JH7 | C14.001 | caspase-1 | 1 |
| C14.005 | caspase-6 | 2 | ||
| C14.006 | caspase-2 | 1 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| S01.151 | trypsin 1 | 2 | ||
| Deubiquitinating protein VCPIP1 ECO:0000305 | C01.036 | cathepsin K | 1 | |
| Developmentally-regulated GTP-binding protein 1 | P32233 | M10.003 | matrix metallopeptidase-2 | 1 |
| Q9Y295 | C01.009 | cathepsin V | 2 | |
| C01.032 | cathepsin L | 2 | ||
| C01.036 | cathepsin K | 5 | ||
| C01.060 | cathepsin B | 3 | ||
| developmentally-regulated GTP-binding protein 1 | S01.151 | trypsin 1 | 5 | |
| developmentally-regulated GTP-binding protein 2 | P55039 | S01.151 | trypsin 1 | 2 |
| DFFA | Q5T6G6 | S01.010 | granzyme B (Homo sapiens-type) | 1 |
| Q8C535 | C14.003 | caspase-3 | 1 | |
| DG1 peptide | G01.002 | aspergilloglutamic peptidase | 1 | |
| Dha kinase/FMN cyclase splice variant | Q2L9C1 | M10.003 | matrix metallopeptidase-2 | 2 |
| S01.151 | trypsin 1 | 2 | ||
| Dhx38 DEAH (Asp-Glu-Ala-His) box polypeptide 38 | Q8R1J6 | S01.010 | granzyme B (Homo sapiens-type) | 1 |
| di-N-acetylchitobiase | Q01460 | XS26.001 | signal peptidase complex (animal) | 1 |
| di-ubiquitin | P0CG47 | C85.006 | OTU1 peptidase (Saccharomyces cerevisiae-type) | 1 |
| di-ubiquitin (Lys48 linked) | C78.004 | Mug105 (Saccharomyces pombe) | 1 | |
| di-ubiquitin (Lys63 linked) | C78.003 | ZUP1 g.p. (Homo sapiens) | 1 | |
| Diablo homolog, mitochondrial | Q9NR28 | M04.001 | thermolysin | 1 |
| M10.005 | matrix metallopeptidase-3 | 1 | ||
| S01.151 | trypsin 1 | 3 | ||
| S01.269 | glutamyl endopeptidase I | 1 | ||
| diablo homolog, mitochondrial | XS26.002 | mitochondrial signal peptidase complex | 1 | |
| diacetyl-Lys-D-Ala-D-Ala | S11.004 | K15-type DD-transpeptidase | 1 | |
| S11.007 | penicillin-binding protein 4 (Neisseria-type) peptidase | 1 | ||
| S11.008 | penicillin-binding protein 5-type peptidase | 1 | ||
| S12.001 | D-Ala-D-Ala carboxypeptidase B | 1 | ||
| S13.002 | D-Ala-D-Ala carboxypeptidase (Actinomadura-type) | 2 | ||
| diacylglycerol kinase | P0ABN1 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| Diacylglycerol kinase alpha | P23743 | C14.005 | caspase-6 | 1 |
| Diacylglycerol kinase epsilon | P52429 | C01.009 | cathepsin V | 1 |
| Diacylglycerol kinase eta | Q8N7J9 | C14.005 | caspase-6 | 2 |
| Diacylglycerol kinase gamma | P49619 | S01.280 | lysyl endopeptidase (bacteria) | 2 |
| Diacylglycerol kinase zeta | Q13574 | S01.139 | granzyme M | 4 |
| Diacylglycerol kinase zeta ECO:0000303|PubMed:8626588 | Q8IVW9 | C01.009 | cathepsin V | 1 |
| C01.018 | cathepsin F | 1 | ||
| C01.032 | cathepsin L | 1 | ||
| C01.036 | cathepsin K | 1 | ||
| Diaminopimelate decarboxylase | Q8ZMA2 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| diapause-specific peptide | Q8T0W8 | XS26.001 | signal peptidase complex (animal) | 1 |
| DIAPI | Q24306 | C14.015 | caspase (insect 1) | 1 |
| C14.019 | caspase DRONC (Drosophila melanogaster) | 1 | ||
| dicer Related Helicase | Q93413 | A01.001 | pepsin A | 280 |
| A01.040 | nepenthesin | 379 | ||
| Dickkopf-related protein 1 | O94907 | S01.081 | kallikrein-related peptidase 15 | 2 |
| dickkopf-related protein 1 | XS26.001 | signal peptidase complex (animal) | 1 | |
| Dickkopf-related protein 3 | Q9QUN9 | M10.003 | matrix metallopeptidase-2 | 3 |
| dickkopf-related protein 3 | Q9UBP4 | M10.024 | membrane-type matrix metallopeptidase-6 | 3 |
| S01.300 | kallikrein-related peptidase 7 | 1 | ||
| XS26.001 | signal peptidase complex (animal) | 1 | ||
| Dickkopf-related protein 3 (Dickkopf-3) (Dkk-3) (mDkk-3) | Q9QUN9 | M12.210 | ADAM10 peptidase | 1 |
| M12.217 | ADAM17 peptidase | 1 | ||
| dickkopf-related protein 4 short form | Q9UBT3 | XS26.001 | signal peptidase complex (animal) | 1 |
| Differentially expressed in FDCP 6 homolog | Q9H4E7 | C01.036 | cathepsin K | 1 |
| diheme cytochrome c napB | P0ABL3 | S26.001 | signal peptidase I | 1 |
| dihydrofolate reductase | P00374 | S01.151 | trypsin 1 | 2 |
| P00381 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 | |
| P0A017 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 | |
| Dihydrofolate synthase/folylpolyglutamate synthase | P08192 | S01.151 | trypsin 1 | 1 |
| Dihydrolipoyl dehydrogenase | P0A9P0 | A02.011 | human endogenous retrovirus K retropepsin | 1 |
| dihydrolipoyl dehydrogenase | C14.003 | caspase-3 | 2 | |
| M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 | ||
| Dihydrolipoyl dehydrogenase | S01.151 | trypsin 1 | 3 | |
| S41.011 | chlamydial protease-like activity factor | 5 | ||
| dihydrolipoyl dehydrogenase | Q04829 | M24.002 | methionyl aminopeptidase 2 | 1 |
| Dihydrolipoyl dehydrogenase | Q8ZRT0 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| Q9YBC8 | M04.001 | thermolysin | 4 | |
| dihydrolipoyl dehydrogenase 1, mitochondrial | Q9M5K3 | M24.A14 | LCP55 (Arabidopsis thaliana) | 1 |
| dihydrolipoyl dehydrogenase 2, mitochondrial | Q9M5K2 | M24.A14 | LCP55 (Arabidopsis thaliana) | 1 |
| Dihydrolipoyl dehydrogenase, mitochondrial | O08749 | M10.003 | matrix metallopeptidase-2 | 1 |
| P09622 | C01.018 | cathepsin F | 1 | |
| C01.036 | cathepsin K | 1 | ||
| C01.060 | cathepsin B | 1 | ||
| M04.001 | thermolysin | 1 | ||
| M10.005 | matrix metallopeptidase-3 | 3 | ||
| S01.047 | human airway trypsin-like peptidase | 1 | ||
| S01.151 | trypsin 1 | 5 | ||
| S01.269 | glutamyl endopeptidase I | 2 | ||
| dihydrolipoyl dehydrogenase, mitochondrial precursor | M10.003 | matrix metallopeptidase-2 | 1 | |
| S01.131 | elastase-2 | 1 | ||
| S01.151 | trypsin 1 | 1 | ||
| S01.217 | thrombin | 1 | ||
| S01.269 | glutamyl endopeptidase I | 2 | ||
| dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial | Q8RWN9 | M24.A14 | LCP55 (Arabidopsis thaliana) | 1 |
| dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex, mitochondrial | Q5M729 | M24.A14 | LCP55 (Arabidopsis thaliana) | 1 |
| Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | P06959 | A02.011 | human endogenous retrovirus K retropepsin | 2 |
| C14.003 | caspase-3 | 1 | ||
| M12.221 | ADAMTS4 peptidase | 1 | ||
| dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 | |
| Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | S01.151 | trypsin 1 | 7 | |
| dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | S01.269 | glutamyl endopeptidase I | 1 | |
| Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | S41.011 | chlamydial protease-like activity factor | 9 | |
| dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | P10802 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial | P10515 | C14.003 | caspase-3 | 2 |
| C14.005 | caspase-6 | 2 | ||
| C14.009 | caspase-8 | 2 | ||
| M10.003 | matrix metallopeptidase-2 | 2 | ||
| Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial | M10.005 | matrix metallopeptidase-3 | 7 | |
| dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial | S01.001 | chymotrypsin A (cattle-type) | 1 | |
| S01.010 | granzyme B (Homo sapiens-type) | 3 | ||
| Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial | S01.047 | human airway trypsin-like peptidase | 1 | |
| S01.151 | trypsin 1 | 2 | ||
| S01.224 | hepsin | 1 | ||
| dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial | S01.269 | glutamyl endopeptidase I | 1 | |
| P12695 | M16.003 | mitochondrial processing peptidase beta-subunit | 1 | |
| M24.026 | aminopeptidase P3 | 1 | ||
| dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex | P0AFG6 | C14.003 | caspase-3 | 1 |
| Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex | M12.025 | ADAMTS15 peptidase | 1 | |
| dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 | |
| Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex | S01.151 | trypsin 1 | 6 | |
| dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex | S01.269 | glutamyl endopeptidase I | 1 | |
| Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex | S41.011 | chlamydial protease-like activity factor | 1 | |
| dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial | Q9FLQ4 | M24.A14 | LCP55 (Arabidopsis thaliana) | 1 |
| dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial | Q8H107 | M24.A14 | LCP55 (Arabidopsis thaliana) | 1 |
| Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial | P36957 | C01.009 | cathepsin V | 1 |
| C01.032 | cathepsin L | 1 | ||
| C01.034 | cathepsin S | 2 | ||
| C01.036 | cathepsin K | 1 | ||
| M10.005 | matrix metallopeptidase-3 | 2 | ||
| S01.151 | trypsin 1 | 1 | ||
| S01.269 | glutamyl endopeptidase I | 2 | ||
| Q9D2G2 | A01.009 | cathepsin D | 1 | |
| Q9D2G2-1 | M10.003 | matrix metallopeptidase-2 | 1 | |
| dihydroorotase | P05020 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| Dihydroorotase | S41.011 | chlamydial protease-like activity factor | 1 | |
| dihydropteridine reductase | P09417 | M10.003 | matrix metallopeptidase-2 | 2 |
| S01.151 | trypsin 1 | 6 | ||
| Dihydropteridine reductase | Q8BVI4 | A01.010 | cathepsin E | 1 |
| Dihydropyrimidinase-related protein 1 | Q14194 | C01.060 | cathepsin B | 3 |
| dihydropyrimidinase-related protein 1 | S01.151 | trypsin 1 | 2 | |
| Dihydropyrimidinase-related protein 1 isoform LCRMP-1 | Q14194-2 | S01.151 | trypsin 1 | 2 |
| Dihydropyrimidinase-related protein 2 | O08553 | A01.010 | cathepsin E | 2 |
| M10.003 | matrix metallopeptidase-2 | 1 | ||
| Q16555 | C01.009 | cathepsin V | 3 | |
| C01.034 | cathepsin S | 1 | ||
| C01.036 | cathepsin K | 3 | ||
| C01.060 | cathepsin B | 3 | ||
| C13.004 | legumain, animal-type | 4 | ||
| M04.001 | thermolysin | 1 | ||
| M09.005 | collagenase ColT (Clostridium tetani) | 2 | ||
| M10.005 | matrix metallopeptidase-3 | 2 | ||
| S01.081 | kallikrein-related peptidase 15 | 1 | ||
| dihydropyrimidinase-related protein 2 | S01.151 | trypsin 1 | 17 | |
| Dihydropyrimidinase-related protein 2 (DRP-2) (Unc-33-like phosphoprotein 2) (ULIP-2) | O08553 | M12.217 | ADAM17 peptidase | 1 |
| Dihydropyrimidinase-related protein 3 | Q14195 | C01.060 | cathepsin B | 1 |
| Q62188 | M10.003 | matrix metallopeptidase-2 | 1 | |
| Dihydropyrimidinase-related protein 5 | Q9BPU6 | C01.032 | cathepsin L | 2 |
| Dihydropyrimidine dehydrogenase [NADP+] precursor | Q12882 | S01.280 | lysyl endopeptidase (bacteria) | 2 |
| dihydroxy-acid dehydratase | P05791 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| dihydroxyacetone kinase | Q3LXA3 | S01.151 | trypsin 1 | 3 |
| dimethyl sulfoxide reductase | Q57366 | S26.001 | signal peptidase I | 1 |
| Dimethyladenosine transferase 2, mitochondrial precursor | Q9H5Q4 | M35.004 | peptidyl-Lys metallopeptidase | 2 |
| dimethylamine corrinoid protein | O93657 | M24.002 | methionyl aminopeptidase 2 | 1 |
| dimethylaminonaphthalenesulfonyl-Pro-Val-Tyr-His-Gln-Ala-Trp-NH2 | C04.001 | nuclear-inclusion-a peptidase (plum pox virus) | 1 | |
| dimethylaminonaphthalenesulfonyl-Pro-Val-Tyr-His-Gln-Trp-NH2 | C04.001 | nuclear-inclusion-a peptidase (plum pox virus) | 1 | |
| dimethylarginine dimethylaminohydrolase 2 | A3KGN5 | S01.151 | trypsin 1 | 2 |
| Q5SRR8 | S01.151 | trypsin 1 | 2 | |
| Q5SSV3 | S01.151 | trypsin 1 | 2 | |
| Dipeptidase 1 | P16444 | C13.005 | glycosylphosphatidylinositol:protein transamidase | 1 |
| Dipeptide ABC transporter, dipeptide-binding protein DppA | Q9Y9N1 | M04.001 | thermolysin | 10 |
| Dipeptide transport protein | Q8ZLB2 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| Dipeptidyl carboxypeptidase | P24171 | C14.003 | caspase-3 | 1 |
| S01.151 | trypsin 1 | 1 | ||
| Dipeptidyl peptidase 1 | P53634 | M04.001 | thermolysin | 1 |
| S01.151 | trypsin 1 | 3 | ||
| S01.269 | glutamyl endopeptidase I | 2 | ||
| Q7Z3G7 | S01.081 | kallikrein-related peptidase 15 | 2 | |
| Dipeptidyl peptidase 2 | Q9UHL4 | A32.002 | RC1339 g.p. (Rickettsia conorii) | 2 |
| M09.002 | collagenase G/A (Clostridium histolyticum) | 2 | ||
| M09.003 | bacterial collagenase H | 2 | ||
| Dipeptidyl peptidase 3 | Q99KK7 | A01.010 | cathepsin E | 1 |
| M10.006 | matrix metallopeptidase-10 (Homo sapiens-type) | 1 | ||
| Q9NY33 | C01.009 | cathepsin V | 1 | |
| C01.018 | cathepsin F | 1 | ||
| C01.032 | cathepsin L | 1 | ||
| C01.034 | cathepsin S | 1 | ||
| C01.036 | cathepsin K | 3 | ||
| M04.001 | thermolysin | 2 | ||
| M10.005 | matrix metallopeptidase-3 | 2 | ||
| S01.081 | kallikrein-related peptidase 15 | 1 | ||
| S01.151 | trypsin 1 | 4 | ||
| S01.269 | glutamyl endopeptidase I | 1 | ||
| dipeptidyl-peptidase 1 precursor | P53634 | C01.032 | cathepsin L | 5 |
| C01.070 | dipeptidyl-peptidase I | 3 | ||
| XS26.001 | signal peptidase complex (animal) | 1 | ||
| dipeptidyl-peptidase I | P80067 | XS26.001 | signal peptidase complex (animal) | 1 |
| dipeptidyl-peptidase III | Q9NY33 | S01.151 | trypsin 1 | 4 |
| dipeptidyl-peptidase V | O13479 | S26.010 | signalase (animal) 21 kDa component | 1 |
| Diphosphoinositol polyphosphate phosphohydrolase 1 | O95989 | S01.151 | trypsin 1 | 2 |
| Diphosphoinositol polyphosphate phosphohydrolase 2 | Q9NZJ9 | C14.004 | caspase-7 | 1 |
| S01.151 | trypsin 1 | 1 | ||
| Diphosphomevalonate decarboxylase | P53602 | A32.002 | RC1339 g.p. (Rickettsia conorii) | 2 |
| C01.036 | cathepsin K | 1 | ||
| diphosphomevalonate decarboxylase | M10.003 | matrix metallopeptidase-2 | 1 | |
| S01.151 | trypsin 1 | 3 | ||
| diphosphomevalonate decarboxylase variant | Q59G80 | M10.003 | matrix metallopeptidase-2 | 1 |
| S01.151 | trypsin 1 | 3 | ||
| Diphthamide biosynthesis protein 2 | Q9BQC3 | C14.003 | caspase-3 | 1 |
| Diphtheria toxin | P00587 | S08.071 | furin | 1 |
| S08.073 | PCSK2 peptidase | 1 | ||
| S08.074 | PCSK4 peptidase | 1 | ||
| S08.075 | PCSK6 peptidase | 1 | ||
| S08.076 | PCSK5 peptidase | 1 | ||
| S08.077 | PCSK7 peptidase | 1 | ||
| Q6NK15 | S08.075 | PCSK6 peptidase | 1 | |
| diphtheria toxin fragment B | P00588 | S26.010 | signalase (animal) 21 kDa component | 1 |
| Diphthine synthase | Q9H2P9 | C01.032 | cathepsin L | 1 |
| diptericin-D | P18684 | XS26.001 | signal peptidase complex (animal) | 1 |
| DIS3-like exonuclease 2 | Q8BMG9 | S01.151 | trypsin 1 | 1 |
| Q8CI75 | S01.010 | granzyme B (Homo sapiens-type) | 1 | |
| DIS3-like exonuclease 2 ECO:0000255|HAMAP-Rule:MF_03045 | Q8IYB7 | C01.009 | cathepsin V | 1 |
| C01.018 | cathepsin F | 1 | ||
| C01.032 | cathepsin L | 1 | ||
| Disabled homolog 2 | P98078 | A01.010 | cathepsin E | 3 |
| Disco-interacting protein 2 homolog B | Q9P265 | C14.003 | caspase-3 | 1 |
| Discoidin, CUB and LCCL domain-containing protein 2 | Q96PD2 | C13.004 | legumain, animal-type | 1 |
| S01.151 | trypsin 1 | 1 | ||
| discoidin-1 subunit B/C | P02887 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| discs, large homolog 3 | Q5JUW8 | S01.151 | trypsin 1 | 2 |
| disintegrin and metalloproteinase domain-containing protein 10 | O14672 | M12.004 | meprin beta subunit | 2 |
| Disintegrin and metalloproteinase domain-containing protein 10 | S01.081 | kallikrein-related peptidase 15 | 1 | |
| disintegrin and metalloproteinase domain-containing protein 10 | S08.071 | furin | 1 | |
| Disintegrin and metalloproteinase domain-containing protein 10 precursor | M12.004 | meprin beta subunit | 1 | |
| S08.071 | furin | 1 | ||
| S08.073 | PCSK2 peptidase | 1 | ||
| S08.074 | PCSK4 peptidase | 1 | ||
| S08.075 | PCSK6 peptidase | 1 | ||
| S08.076 | PCSK5 peptidase | 1 | ||
| S08.077 | PCSK7 peptidase | 1 | ||
| Disintegrin and metalloproteinase domain-containing protein 12 | O43184 | S08.074 | PCSK4 peptidase | 1 |
| S08.075 | PCSK6 peptidase | 1 | ||
| S08.076 | PCSK5 peptidase | 1 | ||
| S08.077 | PCSK7 peptidase | 1 | ||
| Disintegrin and metalloproteinase domain-containing protein 15 | Q13444 | M12.004 | meprin beta subunit | 1 |
| S08.071 | furin | 1 | ||
| Disintegrin and metalloproteinase domain-containing protein 17 | P78536 | S01.081 | kallikrein-related peptidase 15 | 1 |
| disintegrin and metalloproteinase domain-containing protein 17 | S08.071 | furin | 1 | |
| Disintegrin and metalloproteinase domain-containing protein 17 | S08.073 | PCSK2 peptidase | 1 | |
| S08.074 | PCSK4 peptidase | 1 | ||
| S08.075 | PCSK6 peptidase | 1 | ||
| S08.076 | PCSK5 peptidase | 1 | ||
| S08.077 | PCSK7 peptidase | 1 | ||
| Disintegrin and metalloproteinase domain-containing protein 17 precursor | XS26.001 | signal peptidase complex (animal) | 1 | |
| Disintegrin and metalloproteinase domain-containing protein 19 | Q9H013 | S08.073 | PCSK2 peptidase | 1 |
| S08.074 | PCSK4 peptidase | 1 | ||
| S08.075 | PCSK6 peptidase | 1 | ||
| S08.076 | PCSK5 peptidase | 1 | ||
| S08.077 | PCSK7 peptidase | 1 | ||
| Disintegrin and metalloproteinase domain-containing protein 1a | Q60813 | S08.071 | furin | 1 |
| S08.073 | PCSK2 peptidase | 1 | ||
| S08.074 | PCSK4 peptidase | 1 | ||
| S08.075 | PCSK6 peptidase | 1 | ||
| S08.076 | PCSK5 peptidase | 1 | ||
| S08.077 | PCSK7 peptidase | 1 | ||
| Disintegrin and metalloproteinase domain-containing protein 22 | Q9P0K1 | C01.009 | cathepsin V | 1 |
| C01.018 | cathepsin F | 1 | ||
| Disintegrin and metalloproteinase domain-containing protein 23 | O75077 | C01.009 | cathepsin V | 1 |
| disintegrin and metalloproteinase domain-containing protein 28 | Q9UKQ2 | M10.008 | matrix metallopeptidase-7 | 1 |
| Disintegrin and metalloproteinase domain-containing protein 29 precursor | Q9UKF5 | M35.004 | peptidyl-Lys metallopeptidase | 2 |
| Disintegrin and metalloproteinase domain-containing protein 30 precursor | Q9UKF2 | S01.280 | lysyl endopeptidase (bacteria) | 2 |
| disintegrin and metalloproteinase domain-containing protein 7 | Q63180 | XS26.001 | signal peptidase complex (animal) | 1 |
| Disintegrin and metalloproteinase domain-containing protein 8 | P78325 | M10.005 | matrix metallopeptidase-3 | 1 |
| S01.081 | kallikrein-related peptidase 15 | 1 | ||
| S08.071 | furin | 1 | ||
| S08.073 | PCSK2 peptidase | 1 | ||
| S08.074 | PCSK4 peptidase | 1 | ||
| S08.075 | PCSK6 peptidase | 1 | ||
| S08.076 | PCSK5 peptidase | 1 | ||
| S08.077 | PCSK7 peptidase | 1 | ||
| Disintegrin and metalloproteinase domain-containing protein 9 | Q13443 | M12.002 | meprin alpha subunit | 3 |
| M12.004 | meprin beta subunit | 4 | ||
| disintegrin and metalloproteinase domain-containing protein 9 | S08.071 | furin | 1 | |
| Q61072 | M12.004 | meprin beta subunit | 2 | |
| disks large homolog 1 | Q12959 | C14.003 | caspase-3 | 1 |
| Disks large homolog 1 | S01.151 | trypsin 1 | 1 | |
| disks large homolog 3 | Q92796 | M10.003 | matrix metallopeptidase-2 | 1 |
| S01.001 | chymotrypsin A (cattle-type) | 1 | ||
| S01.151 | trypsin 1 | 2 | ||
| Disks large homolog 3 isoform 2 | Q92796-2 | S01.151 | trypsin 1 | 2 |
| Disks large-associated protein 4 | Q9Y2H0 | C14.003 | caspase-3 | 1 |
| Disks large-associated protein 5 | Q15398 | C01.032 | cathepsin L | 1 |
| C01.060 | cathepsin B | 2 | ||
| S01.151 | trypsin 1 | 1 | ||
| S01.280 | lysyl endopeptidase (bacteria) | 2 | ||
| dITP/XTP pyrophosphatase | P52061 | S01.151 | trypsin 1 | 1 |
| S41.011 | chlamydial protease-like activity factor | 1 | ||
| diubiquitin | P0CG47 | C101.001 | OTULIN peptidase | 1 |
| C124.001 | Lem27 (Legionella pneumophila) | 5 | ||
| C64.001 | Cezanne peptidase | 1 | ||
| C64.002 | Cezanne-2 peptidase | 1 | ||
| C64.003 | A20 peptidase | 1 | ||
| C64.004 | trabid peptidase | 3 | ||
| C64.006 | VCIP135 deubiquitinating peptidase | 2 | ||
| C65.001 | otubain-1 | 2 | ||
| C65.002 | otubain-2 | 1 | ||
| C85.001 | OTUD5 peptidase (Homo sapiens) | 2 | ||
| C85.003 | OTUD3 peptidase (Homo sapiens) | 2 | ||
| C85.004 | OTUD1 peptidase (Homo sapiens) | 1 | ||
| C85.007 | YOD1 peptidase | 4 | ||
| C85.008 | OTU2 peptidase (Saccharomyces cerevisiae-type) | 4 | ||
| diubiquitin-ac-Lys | C12.001 | ubiquitinyl hydrolase-L1 | 1 | |
| C12.003 | ubiquitinyl hydrolase-L3 | 1 | ||
| diubiquitin-Lys | C12.001 | ubiquitinyl hydrolase-L1 | 1 | |
| C12.003 | ubiquitinyl hydrolase-L3 | 1 | ||
| diuretic hormone class 2 | Q9VLK4 | M13.014 | neprilysin-4 (Drosophila melanogaster) | 2 |
| Dixin | Q155Q3 | M35.004 | peptidyl-Lys metallopeptidase | 2 |
| DJ-1 putative peptidase | Q99497 | A02.001 | HIV-1 retropepsin | 4 |
| C01.032 | cathepsin L | 4 | ||
| C01.034 | cathepsin S | 2 | ||
| C01.060 | cathepsin B | 1 | ||
| M10.003 | matrix metallopeptidase-2 | 9 | ||
| M10.014 | membrane-type matrix metallopeptidase-1 | 2 | ||
| M12.001 | astacin | 1 | ||
| M12.002 | meprin alpha subunit | 3 | ||
| M12.004 | meprin beta subunit | 2 | ||
| M12.032 | LAST peptidase (Limulus-type) | 1 | ||
| M12.033 | LAST_MAM peptidase (Limulus-type) | 1 | ||
| M35.004 | peptidyl-Lys metallopeptidase | 2 | ||
| S01.001 | chymotrypsin A (cattle-type) | 2 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 4 | ||
| S01.131 | elastase-2 | 1 | ||
| S01.151 | trypsin 1 | 12 | ||
| S01.269 | glutamyl endopeptidase I | 4 | ||
| DJ639P13.2.2 | Q9BWY6 | S01.151 | trypsin 1 | 4 |
| DL-Val-Leu-Arg-NHPhNO2 | S01.160 | kallikrein 1 | 1 | |
| DmX-like protein 2 | Q8TDJ6 | C14.005 | caspase-6 | 2 |
| DNA (cytosine-5)-methyltransferase 1 | P13864 | S01.010 | granzyme B (Homo sapiens-type) | 1 |
| S01.151 | trypsin 1 | 1 | ||
| P26358 | C01.009 | cathepsin V | 2 | |
| C01.018 | cathepsin F | 1 | ||
| C01.034 | cathepsin S | 1 | ||
| C01.036 | cathepsin K | 10 | ||
| C01.060 | cathepsin B | 7 | ||
| C13.004 | legumain, animal-type | 1 | ||
| C14.004 | caspase-7 | 1 | ||
| S01.151 | trypsin 1 | 6 | ||
| S01.269 | glutamyl endopeptidase I | 3 | ||
| DNA (cytosine-5)-methyltransferase 3A | Q9Y6K1 | C14.005 | caspase-6 | 1 |
| DNA (cytosine-5)-methyltransferase 3B | Q9UBC3 | S01.010 | granzyme B (Homo sapiens-type) | 1 |
| DNA adenine methylase | P0AEE8 | M12.221 | ADAMTS4 peptidase | 1 |
| DNA adenine methyltransferase YhdJ | P28638 | S01.151 | trypsin 1 | 1 |
| DNA binding repressor protein BlaI | P0A042 | M56.001 | BlaR1 peptidase | 1 |
| DNA cross-link repair 1B protein | Q9H816 | M35.004 | peptidyl-Lys metallopeptidase | 2 |
| DNA damage-binding protein 1 | Q16531 | C01.009 | cathepsin V | 1 |
| C01.060 | cathepsin B | 1 | ||
| M10.005 | matrix metallopeptidase-3 | 1 | ||
| M12.002 | meprin alpha subunit | 2 | ||
| S01.081 | kallikrein-related peptidase 15 | 1 | ||
| S01.151 | trypsin 1 | 15 | ||
| S01.269 | glutamyl endopeptidase I | 3 | ||
| Q3U1J4 | M10.003 | matrix metallopeptidase-2 | 1 | |
| DNA damage-inducible transcript 4 protein | Q9NX09 | C01.060 | cathepsin B | 1 |
| DNA dC->dU-editing enzyme APOBEC-3B | Q9UH17 | A32.002 | RC1339 g.p. (Rickettsia conorii) | 1 |
| DNA double-strand break repair protein Mre11 | Q9YFY8 | M04.001 | thermolysin | 1 |
| DNA double-strand break repair Rad50 ATPase | Q9YFZ1 | M04.001 | thermolysin | 6 |
| DNA excision repair protein ERCC-6-like | Q2NKX8 | C01.036 | cathepsin K | 1 |
| C14.005 | caspase-6 | 1 | ||
| M35.004 | peptidyl-Lys metallopeptidase | 2 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| DNA excision repair protein ERCC-8 | Q13216 | M35.004 | peptidyl-Lys metallopeptidase | 2 |
| DNA fragmentation factor subunit alpha | O00273 | C01.032 | cathepsin L | 1 |
| C01.036 | cathepsin K | 1 | ||
| C01.060 | cathepsin B | 1 | ||
| C14.003 | caspase-3 | 2 | ||
| C14.005 | caspase-6 | 2 | ||
| M10.005 | matrix metallopeptidase-3 | 2 | ||
| M12.033 | LAST_MAM peptidase (Limulus-type) | 1 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| S01.136 | granzyme B, rodent-type | 1 | ||
| S01.139 | granzyme M | 1 | ||
| S01.151 | trypsin 1 | 6 | ||
| S01.224 | hepsin | 1 | ||
| S01.269 | glutamyl endopeptidase I | 1 | ||
| O54786 | C14.003 | caspase-3 | 2 | |
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| S01.151 | trypsin 1 | 1 | ||
| DNA fragmentation factor subunit beta | O76075 | S01.151 | trypsin 1 | 2 |
| DNA gyrase subunit A | P0AES4 | C14.003 | caspase-3 | 2 |
| M12.025 | ADAMTS15 peptidase | 1 | ||
| M12.221 | ADAMTS4 peptidase | 1 | ||
| M12.225 | ADAMTS5 peptidase | 1 | ||
| S01.151 | trypsin 1 | 3 | ||
| dNA gyrase subunit A | S01.269 | glutamyl endopeptidase I | 1 | |
| DNA gyrase subunit B | P0A0K8 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| P0A2I3 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 | |
| P0AES6 | M12.221 | ADAMTS4 peptidase | 1 | |
| M12.225 | ADAMTS5 peptidase | 2 | ||
| S01.151 | trypsin 1 | 1 | ||
| S41.011 | chlamydial protease-like activity factor | 1 | ||
| DNA helicase B | Q6KAT5 | S01.010 | granzyme B (Homo sapiens-type) | 1 |
| S01.151 | trypsin 1 | 1 | ||
| Q6NVF4 | S01.010 | granzyme B (Homo sapiens-type) | 1 | |
| DNA helicase II | P03018 | S41.011 | chlamydial protease-like activity factor | 1 |
| DNA ligase | O87703 | M04.001 | thermolysin | 2 |
| P15042 | S01.151 | trypsin 1 | 1 | |
| Q50566 | S01.001 | chymotrypsin A (cattle-type) | 2 | |
| S01.151 | trypsin 1 | 2 | ||
| S01.269 | glutamyl endopeptidase I | 1 | ||
| Q5HEL8 | M04.001 | thermolysin | 7 | |
| Q9YD18 | M04.001 | thermolysin | 2 | |
| DNA ligase 1 | P18858 | C01.009 | cathepsin V | 1 |
| C01.036 | cathepsin K | 2 | ||
| C01.060 | cathepsin B | 3 | ||
| C13.004 | legumain, animal-type | 1 | ||
| C14.005 | caspase-6 | 1 | ||
| M10.003 | matrix metallopeptidase-2 | 1 | ||
| S01.151 | trypsin 1 | 2 | ||
| S01.269 | glutamyl endopeptidase I | 1 | ||
| DNA ligase 3 | P49916 | C01.036 | cathepsin K | 1 |
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| DNA methyltransferase 1-associated protein 1 | Q9NPF5 | S01.010 | granzyme B (Homo sapiens-type) | 1 |
| DNA mismatch repair protein Mlh1 | P40692 | C01.036 | cathepsin K | 1 |
| C14.003 | caspase-3 | 1 | ||
| C14.005 | caspase-6 | 1 | ||
| C14.006 | caspase-2 | 1 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| DNA mismatch repair protein Msh2 | P43246 | A02.001 | HIV-1 retropepsin | 1 |
| C01.009 | cathepsin V | 3 | ||
| C01.032 | cathepsin L | 3 | ||
| C01.036 | cathepsin K | 4 | ||
| S01.139 | granzyme M | 2 | ||
| S01.151 | trypsin 1 | 7 | ||
| P43247 | S01.151 | trypsin 1 | 1 | |
| DNA mismatch repair protein Msh3 | P20585 | C01.009 | cathepsin V | 1 |
| C01.032 | cathepsin L | 1 | ||
| DNA mismatch repair protein Msh6 | P52701 | S01.010 | granzyme B (Homo sapiens-type) | 2 |
| S01.136 | granzyme B, rodent-type | 1 | ||
| S01.139 | granzyme M | 3 | ||
| S01.151 | trypsin 1 | 7 | ||
| P54276 | S01.010 | granzyme B (Homo sapiens-type) | 2 | |
| S01.136 | granzyme B, rodent-type | 2 | ||
| S01.151 | trypsin 1 | 1 | ||
| DNA mismatch repair protein Msh6 ECO:0000250|UniProtKB:P54276 | P52701 | C01.018 | cathepsin F | 1 |
| C01.036 | cathepsin K | 4 | ||
| C01.060 | cathepsin B | 3 | ||
| DNA mismatch repair protein mutH | P06722 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| DNA mismatch repair protein mutS | P0A1Y0 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| Q56239 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 | |
| dNA polymerase | O33845 | N10.004 | intein-containing translation initiation factor IF-2 precursor | 2 |
| P77933 | N10.007 | intein-containing DNA-dependent DNA polymerase precursor | 2 | |
| DNA polymerase 2 | O93746 | M04.001 | thermolysin | 6 |
| DNA polymerase alpha catalytic subunit | P09884 | C14.005 | caspase-6 | 2 |
| S01.010 | granzyme B (Homo sapiens-type) | 2 | ||
| DNA polymerase beta | P06746 | C01.060 | cathepsin B | 1 |
| S01.280 | lysyl endopeptidase (bacteria) | 2 | ||
| DNA polymerase delta catalytic subunit | P28340 | C14.005 | caspase-6 | 1 |
| P52431 | S01.151 | trypsin 1 | 1 | |
| DNA polymerase delta catalytic subunit ECO:0000305 | P28340 | C01.036 | cathepsin K | 3 |
| DNA polymerase delta subunit 2 | P49005 | C01.036 | cathepsin K | 1 |
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| DNA polymerase delta subunit 3 | Q15054 | C01.036 | cathepsin K | 1 |
| C14.005 | caspase-6 | 1 | ||
| M35.004 | peptidyl-Lys metallopeptidase | 2 | ||
| DNA polymerase delta subunit 4 | Q9CWP8 | S01.010 | granzyme B (Homo sapiens-type) | 1 |
| S01.151 | trypsin 1 | 1 | ||
| DNA polymerase epsilon catalytic subunit A | Q07864 | C01.036 | cathepsin K | 1 |
| DNA polymerase epsilon subunit 3 | Q9JKP7 | A01.009 | cathepsin D | 1 |
| M10.003 | matrix metallopeptidase-2 | 1 | ||
| M10.004 | matrix metallopeptidase-9 | 1 | ||
| Q9NRF9 | C01.009 | cathepsin V | 1 | |
| C01.018 | cathepsin F | 4 | ||
| C01.032 | cathepsin L | 1 | ||
| C01.036 | cathepsin K | 2 | ||
| C13.004 | legumain, animal-type | 2 | ||
| S01.151 | trypsin 1 | 1 | ||
| DNA polymerase epsilon, catalytic subunit A | Q07864 | C14.003 | caspase-3 | 2 |
| DNA polymerase eta | Q9Y253 | S01.010 | granzyme B (Homo sapiens-type) | 1 |
| DNA polymerase I | P00582 | S01.151 | trypsin 1 | 1 |
| S41.011 | chlamydial protease-like activity factor | 1 | ||
| Q9F173 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 | |
| DNA polymerase II | P21189 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| dNA polymerase II large subunit | A3CXE7 | N10.006 | intein-containing DNA polymerase II large subunit DP2 precursor Mername-AA282 | 2 |
| A7I4I9 | N10.006 | intein-containing DNA polymerase II large subunit DP2 precursor Mername-AA282 | 2 | |
| DNA polymerase II large subunit | C6A4U4 | N10.005 | intein-containing DNA polymerase II large subunit DP2 precursor Mername-AA281 | 2 |
| D3SVF8 | N10.006 | intein-containing DNA polymerase II large subunit DP2 precursor Mername-AA282 | 2 | |
| O57861 | N10.005 | intein-containing DNA polymerase II large subunit DP2 precursor Mername-AA281 | 2 | |
| dNA polymerase II large subunit | Q2FSF9 | N10.006 | intein-containing DNA polymerase II large subunit DP2 precursor Mername-AA282 | 2 |
| Q5JET0 | N10.005 | intein-containing DNA polymerase II large subunit DP2 precursor Mername-AA281 | 2 | |
| Q5UZ40 | N10.006 | intein-containing DNA polymerase II large subunit DP2 precursor Mername-AA282 | 2 | |
| Q9HMX8 | N10.006 | intein-containing DNA polymerase II large subunit DP2 precursor Mername-AA282 | 2 | |
| Q9V2F4 | N10.005 | intein-containing DNA polymerase II large subunit DP2 precursor Mername-AA281 | 2 | |
| DNA polymerase II large subunit DP2, intein containing | C5A316 | N10.005 | intein-containing DNA polymerase II large subunit DP2 precursor Mername-AA281 | 2 |
| dNA polymerase II, large subunit DP2 | B8GE46 | N10.006 | intein-containing DNA polymerase II large subunit DP2 precursor Mername-AA282 | 2 |
| B9LRD2 | N10.006 | intein-containing DNA polymerase II large subunit DP2 precursor Mername-AA282 | 2 | |
| DNA polymerase II, large subunit DP2 | C7NZY6 | N10.006 | intein-containing DNA polymerase II large subunit DP2 precursor Mername-AA282 | 2 |
| dNA polymerase II, large subunit DP2 | C9RGL5 | N10.005 | intein-containing DNA polymerase II large subunit DP2 precursor Mername-AA281 | 2 |
| DNA polymerase II, large subunit DP2 | D3S8H3 | N10.005 | intein-containing DNA polymerase II large subunit DP2 precursor Mername-AA281 | 2 |
| dNA polymerase II, large subunit DP2 | D5VTT0 | N10.005 | intein-containing DNA polymerase II large subunit DP2 precursor Mername-AA281 | 2 |
| dNA polymerase II, small subunit | B6YUE7 | N10.005 | intein-containing DNA polymerase II large subunit DP2 precursor Mername-AA281 | 2 |
| dNA polymerase III alpha subunit | Q72GP2 | N10.002 | intein-containing replicative DNA helicase precursor | 2 |
| dNA polymerase III subunit alpha | C0QPU4 | N10.002 | intein-containing replicative DNA helicase precursor | 2 |
| DNA polymerase III subunit alpha | P10443 | M12.221 | ADAMTS4 peptidase | 1 |
| dNA polymerase III subunit alpha | P74750 | N10.003 | intein-containing DNA polymerase III subunit alpha precursor | 2 |
| dNA polymerase III, alpha subunit | B7ABG0 | N10.002 | intein-containing replicative DNA helicase precursor | 2 |
| D0MJZ2 | N10.002 | intein-containing replicative DNA helicase precursor | 2 | |
| D3RNR6 | N10.002 | intein-containing replicative DNA helicase precursor | 2 | |
| D7CSP2 | N10.002 | intein-containing replicative DNA helicase precursor | 2 | |
| dNA polymerase III, alpha subunit / Intein | Q114C9 | N10.002 | intein-containing replicative DNA helicase precursor | 2 |
| DNA polymerase III, alpha subunit subfamily, putative | B4W2C3 | N10.002 | intein-containing replicative DNA helicase precursor | 2 |
| dNA polymerase III, subunits gamma and tau | B5VV45 | N10.002 | intein-containing replicative DNA helicase precursor | 2 |
| DNA polymerase sliding clamp 1 | Q9YFT8 | M04.001 | thermolysin | 3 |
| DNA polymerase sliding clamp 2 | Q9Y9V7 | M04.001 | thermolysin | 5 |
| DNA polymerase sliding clamp 3 | Q9YEZ5 | M04.001 | thermolysin | 2 |
| DNA polymerase subunit alpha B | Q14181 | S01.151 | trypsin 1 | 2 |
| DNA polymerase theta ECO:0000303|PubMed:10395804, ECO:0000303|PubMed:14576298, ECO:0000312|HGNC:HGNC:9186 | O75417 | C14.005 | caspase-6 | 1 |
| DNA primase | P07112 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| DNA primase DnaG | Q9YA42 | M04.001 | thermolysin | 14 |
| DNA primase large subunit | P49643 | C01.036 | cathepsin K | 1 |
| S01.151 | trypsin 1 | 2 | ||
| S01.280 | lysyl endopeptidase (bacteria) | 1 | ||
| DNA protection during starvation protein | P0ABT2 | M12.225 | ADAMTS5 peptidase | 1 |
| M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 | ||
| S01.151 | trypsin 1 | 9 | ||
| S41.011 | chlamydial protease-like activity factor | 4 | ||
| Q7CQV9 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 | |
| Q9KWH3 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 | |
| DNA recombination protein RmuC | P0AG71 | S01.151 | trypsin 1 | 1 |
| DNA repair and recombination protein RadA | P0CW92 | M04.001 | thermolysin | 9 |
| DNA repair endonuclease XPF | Q92889 | C01.009 | cathepsin V | 1 |
| C01.018 | cathepsin F | 1 | ||
| C01.032 | cathepsin L | 1 | ||
| C01.036 | cathepsin K | 1 | ||
| DNA repair protein complementing XP-C cells | Q01831 | S01.139 | granzyme M | 2 |
| DNA repair protein complementing XP-G cells | P28715 | M10.003 | matrix metallopeptidase-2 | 1 |
| M35.004 | peptidyl-Lys metallopeptidase | 2 | ||
| dNA repair protein complementing XP-G cells | S01.135 | granzyme A | 1 | |
| DNA repair protein complementing XP-G cells | S01.151 | trypsin 1 | 1 | |
| Q9HD60 | C14.005 | caspase-6 | 1 | |
| DNA repair protein RAD50 | Q92878 | C01.009 | cathepsin V | 1 |
| C01.032 | cathepsin L | 1 | ||
| C01.036 | cathepsin K | 5 | ||
| DNA repair protein RAD51 homolog 1 | Q06609 | C14.003 | caspase-3 | 2 |
| DNA repair protein RAD52 homolog | P43351 | S01.280 | lysyl endopeptidase (bacteria) | 2 |
| DNA repair protein REV1 | Q9UBZ9 | C01.036 | cathepsin K | 1 |
| DNA replication and repair protein recF | P0A7H0 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| DNA replication complex GINS protein PSF3 | Q9BRX5 | S01.151 | trypsin 1 | 2 |
| DNA replication complex GINS protein SLD5 | Q9BRT9 | C14.005 | caspase-6 | 1 |
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| DNA replication licensing factor MCM2 | P49736 | A32.002 | RC1339 g.p. (Rickettsia conorii) | 1 |
| C14.005 | caspase-6 | 2 | ||
| M10.005 | matrix metallopeptidase-3 | 1 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 3 | ||
| S01.081 | kallikrein-related peptidase 15 | 2 | ||
| S01.136 | granzyme B, rodent-type | 1 | ||
| S01.139 | granzyme M | 2 | ||
| S01.151 | trypsin 1 | 7 | ||
| P97310 | C14.001 | caspase-1 | 1 | |
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| S01.136 | granzyme B, rodent-type | 1 | ||
| S01.151 | trypsin 1 | 1 | ||
| DNA replication licensing factor MCM2 (EC 3.6.4.12) (Minichromosome maintenance protein 2 homolog) (Nuclear protein BM28) | M12.210 | ADAM10 peptidase | 1 | |
| M12.217 | ADAM17 peptidase | 1 | ||
| DNA replication licensing factor MCM2 ECO:0000305 | P49736 | C01.009 | cathepsin V | 2 |
| C01.032 | cathepsin L | 2 | ||
| C01.036 | cathepsin K | 28 | ||
| C01.060 | cathepsin B | 5 | ||
| DNA replication licensing factor MCM3 | P25205 | M10.003 | matrix metallopeptidase-2 | 1 |
| S01.001 | chymotrypsin A (cattle-type) | 1 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| S01.151 | trypsin 1 | 12 | ||
| S01.269 | glutamyl endopeptidase I | 1 | ||
| P25206 | C14.001 | caspase-1 | 2 | |
| S01.010 | granzyme B (Homo sapiens-type) | 4 | ||
| S01.136 | granzyme B, rodent-type | 3 | ||
| S01.151 | trypsin 1 | 1 | ||
| DNA replication licensing factor MCM3 ECO:0000305 | P25205 | C01.009 | cathepsin V | 8 |
| C01.018 | cathepsin F | 3 | ||
| C01.032 | cathepsin L | 10 | ||
| C01.036 | cathepsin K | 18 | ||
| C01.060 | cathepsin B | 3 | ||
| DNA replication licensing factor MCM4 | P33991 | C01.009 | cathepsin V | 3 |
| C01.032 | cathepsin L | 3 | ||
| C01.036 | cathepsin K | 21 | ||
| C01.060 | cathepsin B | 2 | ||
| C14.001 | caspase-1 | 1 | ||
| C14.005 | caspase-6 | 2 | ||
| C14.006 | caspase-2 | 1 | ||
| M12.033 | LAST_MAM peptidase (Limulus-type) | 1 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 2 | ||
| S01.136 | granzyme B, rodent-type | 1 | ||
| S01.139 | granzyme M | 2 | ||
| S01.151 | trypsin 1 | 11 | ||
| DNA replication licensing factor MCM5 | P33992 | A32.002 | RC1339 g.p. (Rickettsia conorii) | 1 |
| C14.001 | caspase-1 | 1 | ||
| C14.003 | caspase-3 | 1 | ||
| C14.005 | caspase-6 | 2 | ||
| C14.006 | caspase-2 | 1 | ||
| M10.003 | matrix metallopeptidase-2 | 1 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 2 | ||
| S01.136 | granzyme B, rodent-type | 1 | ||
| S01.151 | trypsin 1 | 3 | ||
| P49718 | S01.010 | granzyme B (Homo sapiens-type) | 1 | |
| S01.136 | granzyme B, rodent-type | 1 | ||
| S01.137 | granzyme C | 1 | ||
| S01.151 | trypsin 1 | 1 | ||
| DNA replication licensing factor MCM5 ECO:0000303|Ref.3 | P33992 | C01.009 | cathepsin V | 5 |
| C01.018 | cathepsin F | 2 | ||
| C01.032 | cathepsin L | 7 | ||
| C01.036 | cathepsin K | 12 | ||
| C01.060 | cathepsin B | 4 | ||
| DNA replication licensing factor MCM6 | Q14566 | A02.001 | HIV-1 retropepsin | 1 |
| C01.009 | cathepsin V | 5 | ||
| C01.018 | cathepsin F | 2 | ||
| C01.032 | cathepsin L | 8 | ||
| C01.034 | cathepsin S | 1 | ||
| C01.036 | cathepsin K | 22 | ||
| C01.060 | cathepsin B | 6 | ||
| C14.005 | caspase-6 | 1 | ||
| M10.003 | matrix metallopeptidase-2 | 1 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 2 | ||
| S01.151 | trypsin 1 | 11 | ||
| DNA replication licensing factor MCM6 (EC 3.6.4.12) (Mis5 homolog) | P97311 | M12.217 | ADAM17 peptidase | 1 |
| DNA replication licensing factor MCM7 | P33993 | A32.002 | RC1339 g.p. (Rickettsia conorii) | 1 |
| C01.009 | cathepsin V | 3 | ||
| C01.018 | cathepsin F | 1 | ||
| C01.032 | cathepsin L | 5 | ||
| C01.036 | cathepsin K | 18 | ||
| C01.060 | cathepsin B | 1 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| S01.151 | trypsin 1 | 3 | ||
| P33993-3 | M10.003 | matrix metallopeptidase-2 | 1 | |
| S01.151 | trypsin 1 | 1 | ||
| dNA replication licensing factor, MCM2/3/5 family | Q5JIT1 | N10.004 | intein-containing translation initiation factor IF-2 precursor | 2 |
| dNA replication licensing factor, Mcm2/Cdc19 ATPase, containing 2 inteins | C5A2A7 | N10.004 | intein-containing translation initiation factor IF-2 precursor | 2 |
| DNA replication terminus site-binding protein | O52714 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| DNA topoisomerase 1 | O73954 | N10.004 | intein-containing translation initiation factor IF-2 precursor | 2 |
| P0A2I1 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 | |
| P11387 | C01.009 | cathepsin V | 3 | |
| C01.032 | cathepsin L | 3 | ||
| C01.036 | cathepsin K | 4 | ||
| C13.004 | legumain, animal-type | 4 | ||
| C14.003 | caspase-3 | 3 | ||
| C14.004 | caspase-7 | 1 | ||
| C14.005 | caspase-6 | 2 | ||
| C14.018 | caspase-14 | 1 | ||
| M10.003 | matrix metallopeptidase-2 | 1 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 2 | ||
| S01.151 | trypsin 1 | 5 | ||
| S01.269 | glutamyl endopeptidase I | 1 | ||
| Q04750 | M10.003 | matrix metallopeptidase-2 | 1 | |
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| S01.151 | trypsin 1 | 1 | ||
| DNA topoisomerase 2-alpha | P11388 | C01.009 | cathepsin V | 7 |
| C01.018 | cathepsin F | 2 | ||
| C01.032 | cathepsin L | 7 | ||
| C01.036 | cathepsin K | 10 | ||
| C01.060 | cathepsin B | 5 | ||
| C13.004 | legumain, animal-type | 1 | ||
| M12.001 | astacin | 1 | ||
| M12.004 | meprin beta subunit | 1 | ||
| M35.004 | peptidyl-Lys metallopeptidase | 2 | ||
| Q9UQP9 | A32.002 | RC1339 g.p. (Rickettsia conorii) | 1 | |
| C14.005 | caspase-6 | 1 | ||
| DNA topoisomerase 2-beta | Q02880 | C01.009 | cathepsin V | 1 |
| C01.018 | cathepsin F | 1 | ||
| C01.032 | cathepsin L | 3 | ||
| C01.036 | cathepsin K | 5 | ||
| C01.060 | cathepsin B | 2 | ||
| C14.005 | caspase-6 | 2 | ||
| M12.002 | meprin alpha subunit | 1 | ||
| M12.004 | meprin beta subunit | 1 | ||
| S01.081 | kallikrein-related peptidase 15 | 1 | ||
| S01.139 | granzyme M | 2 | ||
| DNA topoisomerase 2-binding protein 1 | Q92547 | S01.151 | trypsin 1 | 2 |
| DNA topoisomerase I | C6A350 | N10.004 | intein-containing translation initiation factor IF-2 precursor | 2 |
| dNA topoisomerase I | D3S8D0 | N10.004 | intein-containing translation initiation factor IF-2 precursor | 2 |
| D5VT99 | N10.004 | intein-containing translation initiation factor IF-2 precursor | 2 | |
| Q5JE24 | N10.004 | intein-containing translation initiation factor IF-2 precursor | 2 | |
| DNA translocase FtsK | P46889 | M12.221 | ADAMTS4 peptidase | 1 |
| DNA-(apurinic or apyrimidinic site) endonuclease | P27695 | C01.009 | cathepsin V | 2 |
| C01.018 | cathepsin F | 1 | ||
| C01.032 | cathepsin L | 5 | ||
| C01.036 | cathepsin K | 8 | ||
| C01.060 | cathepsin B | 1 | ||
| DNA-(apurinic or apyrimidinic site) lyase | C01.032 | cathepsin L | 2 | |
| C01.036 | cathepsin K | 3 | ||
| C13.004 | legumain, animal-type | 1 | ||
| C14.005 | caspase-6 | 1 | ||
| M04.001 | thermolysin | 2 | ||
| M10.003 | matrix metallopeptidase-2 | 3 | ||
| M10.005 | matrix metallopeptidase-3 | 4 | ||
| S01.001 | chymotrypsin A (cattle-type) | 3 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| S01.135 | granzyme A | 3 | ||
| S01.151 | trypsin 1 | 18 | ||
| S01.269 | glutamyl endopeptidase I | 2 | ||
| P28352 | M10.003 | matrix metallopeptidase-2 | 2 | |
| DNA-3-methyladenine glycosylase | P29372 | C01.032 | cathepsin L | 1 |
| C01.036 | cathepsin K | 1 | ||
| DNA-binding protein 7a | P61991 | M24.002 | methionyl aminopeptidase 2 | 1 |
| DNA-binding protein 7b | P13123 | M24.002 | methionyl aminopeptidase 2 | 1 |
| DNA-binding protein 7d | P39476 | M24.002 | methionyl aminopeptidase 2 | 1 |
| DNA-binding protein 7e | P13125 | M24.002 | methionyl aminopeptidase 2 | 1 |
| DNA-binding protein A | P16989 | C01.032 | cathepsin L | 1 |
| M12.002 | meprin alpha subunit | 1 | ||
| M12.004 | meprin beta subunit | 1 | ||
| S01.151 | trypsin 1 | 6 | ||
| DNA-binding protein APE_1087b | Q05E29 | M04.001 | thermolysin | 1 |
| DNA-binding protein H-NS | P0A1S2 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| P0ACF8 | M12.221 | ADAMTS4 peptidase | 1 | |
| M12.225 | ADAMTS5 peptidase | 1 | ||
| M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 | ||
| dNA-binding protein H-NS | S01.269 | glutamyl endopeptidase I | 4 | |
| DNA-binding protein H-NS | S41.011 | chlamydial protease-like activity factor | 1 | |
| DNA-binding protein HB1 | P17615 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| DNA-binding protein HU-alpha | P0A1R6 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| P0ACF0 | M12.221 | ADAMTS4 peptidase | 1 | |
| M12.225 | ADAMTS5 peptidase | 1 | ||
| S01.151 | trypsin 1 | 3 | ||
| dNA-binding protein HU-alpha | S01.269 | glutamyl endopeptidase I | 3 | |
| DNA-binding protein HU-alpha | S41.011 | chlamydial protease-like activity factor | 1 | |
| DNA-binding protein HU-beta | P0ACF4 | M12.221 | ADAMTS4 peptidase | 1 |
| M12.225 | ADAMTS5 peptidase | 1 | ||
| S01.151 | trypsin 1 | 2 | ||
| dNA-binding protein HU-beta | S01.269 | glutamyl endopeptidase I | 1 | |
| DNA-binding protein HU-beta | S41.011 | chlamydial protease-like activity factor | 1 | |
| DNA-binding protein Ikaros | Q03267 | S01.137 | granzyme C | 1 |
| Q13422 | C01.009 | cathepsin V | 1 | |
| C01.018 | cathepsin F | 3 | ||
| C01.032 | cathepsin L | 1 | ||
| C01.036 | cathepsin K | 3 | ||
| C01.060 | cathepsin B | 3 | ||
| C14.005 | caspase-6 | 1 | ||
| DNA-binding protein inhibitor ID-1 | Q969Z7 | C01.009 | cathepsin V | 1 |
| C01.032 | cathepsin L | 1 | ||
| C01.036 | cathepsin K | 1 | ||
| DNA-binding protein RFX5 | P48382 | S01.280 | lysyl endopeptidase (bacteria) | 2 |
| DNA-binding protein SATB1 | Q01826 | C14.005 | caspase-6 | 1 |
| M09.003 | bacterial collagenase H | 1 | ||
| DNA-binding protein SMUBP-2 | P38935 | S01.010 | granzyme B (Homo sapiens-type) | 1 |
| DNA-binding protein stpA | P0A1S4 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| DNA-binding protein StpA | P0ACG1 | S01.151 | trypsin 1 | 2 |
| dNA-binding protein stpA | S01.269 | glutamyl endopeptidase I | 1 | |
| DNA-binding transcriptional regulator BolA | P0ABE2 | M12.225 | ADAMTS5 peptidase | 1 |
| DNA-binding transcriptional regulator NtrC | P0AFB8 | S01.151 | trypsin 1 | 1 |
| dNA-dependent metalloprotease SPRTN | Q9H040 | M100.001 | spartan peptidase | 1 |
| DNA-dependent protein kinase catalytic subunit | P78527 | C01.009 | cathepsin V | 8 |
| C01.018 | cathepsin F | 1 | ||
| C01.032 | cathepsin L | 12 | ||
| C01.034 | cathepsin S | 4 | ||
| C01.036 | cathepsin K | 28 | ||
| C01.060 | cathepsin B | 6 | ||
| C13.004 | legumain, animal-type | 2 | ||
| C14.003 | caspase-3 | 2 | ||
| M35.004 | peptidyl-Lys metallopeptidase | 2 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 6 | ||
| S01.139 | granzyme M | 4 | ||
| S01.151 | trypsin 1 | 95 | ||
| S01.269 | glutamyl endopeptidase I | 1 | ||
| S01.280 | lysyl endopeptidase (bacteria) | 1 | ||
| Q9UME3 | A32.002 | RC1339 g.p. (Rickettsia conorii) | 2 | |
| C14.005 | caspase-6 | 2 | ||
| DNA-directed RNA polymerase | P00573 | A26.001 | omptin | 3 |
| A26.002 | OmpP peptidase | 1 | ||
| DNA-directed RNA polymerase I subunit RPA1 | O35134 | S01.010 | granzyme B (Homo sapiens-type) | 1 |
| S01.151 | trypsin 1 | 1 | ||
| O95602 | A32.002 | RC1339 g.p. (Rickettsia conorii) | 1 | |
| C01.009 | cathepsin V | 1 | ||
| C01.032 | cathepsin L | 2 | ||
| C01.036 | cathepsin K | 2 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 2 | ||
| S01.139 | granzyme M | 2 | ||
| S01.151 | trypsin 1 | 1 | ||
| DNA-directed RNA polymerase I subunit RPA2 | Q9H9Y6 | S01.010 | granzyme B (Homo sapiens-type) | 1 |
| S01.151 | trypsin 1 | 1 | ||
| DNA-directed RNA polymerase I subunit RPA34 | O15446 | C01.032 | cathepsin L | 1 |
| C14.005 | caspase-6 | 1 | ||
| M12.002 | meprin alpha subunit | 1 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 3 | ||
| S01.139 | granzyme M | 4 | ||
| S01.151 | trypsin 1 | 1 | ||
| S01.269 | glutamyl endopeptidase I | 1 | ||
| DNA-directed RNA polymerase I subunit RPA34 ECO:0000305 | C01.009 | cathepsin V | 1 | |
| C01.018 | cathepsin F | 1 | ||
| C01.032 | cathepsin L | 1 | ||
| C01.036 | cathepsin K | 1 | ||
| C01.060 | cathepsin B | 1 | ||
| DNA-directed RNA polymerase I subunit RPA43 | Q3B726 | C01.009 | cathepsin V | 2 |
| C01.018 | cathepsin F | 2 | ||
| C01.032 | cathepsin L | 2 | ||
| C01.036 | cathepsin K | 2 | ||
| DNA-directed RNA polymerase I subunit RPA49 | Q9GZS1 | C01.009 | cathepsin V | 1 |
| C01.018 | cathepsin F | 1 | ||
| C01.036 | cathepsin K | 2 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| DNA-directed RNA polymerase II subunit GRINL1A, isoforms 4/5 | Q6EEV4 | C01.036 | cathepsin K | 1 |
| DNA-directed RNA polymerase II subunit RPB1 | P24928 | S01.010 | granzyme B (Homo sapiens-type) | 1 |
| DNA-directed RNA polymerase II subunit RPB1 ECO:0000305 | C01.009 | cathepsin V | 1 | |
| C01.036 | cathepsin K | 1 | ||
| DNA-directed RNA polymerase II subunit RPB2 | P30876 | C01.036 | cathepsin K | 1 |
| S01.151 | trypsin 1 | 1 | ||
| S01.280 | lysyl endopeptidase (bacteria) | 1 | ||
| DNA-directed RNA polymerase II subunit RPB3 | P19387 | C01.036 | cathepsin K | 1 |
| DNA-directed RNA polymerase II subunit RPB3 ECO:0000305 | C01.036 | cathepsin K | 1 | |
| DNA-directed RNA polymerase II subunit RPB9 | P36954 | C01.060 | cathepsin B | 1 |
| P60898 | C14.001 | caspase-1 | 1 | |
| DNA-directed RNA polymerase III subunit RPC2 | Q9NW08 | C01.036 | cathepsin K | 1 |
| DNA-directed RNA polymerase III subunit RPC3 | Q9BUI4 | C01.060 | cathepsin B | 1 |
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| DNA-directed RNA polymerase III subunit RPC4 | P05423 | C01.036 | cathepsin K | 1 |
| C01.060 | cathepsin B | 1 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| S01.139 | granzyme M | 2 | ||
| DNA-directed RNA polymerase III subunit RPC5 | Q9NVU0 | C14.005 | caspase-6 | 1 |
| DNA-directed RNA polymerase subunit | Q9YAU1 | M04.001 | thermolysin | 11 |
| DNA-directed RNA polymerase subunit A' | Q9YAU2 | M04.001 | thermolysin | 3 |
| DNA-directed RNA polymerase subunit alpha | P0A7Z4 | M12.225 | ADAMTS5 peptidase | 1 |
| S01.151 | trypsin 1 | 5 | ||
| S41.011 | chlamydial protease-like activity factor | 3 | ||
| DNA-directed RNA polymerase subunit beta | P06173 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| dNA-directed RNA polymerase subunit beta | P0A8T7 | C14.003 | caspase-3 | 1 |
| DNA-directed RNA polymerase subunit beta | P0A8V2 | C14.003 | caspase-3 | 1 |
| M12.221 | ADAMTS4 peptidase | 3 | ||
| M12.225 | ADAMTS5 peptidase | 1 | ||
| S01.151 | trypsin 1 | 12 | ||
| dNA-directed RNA polymerase subunit beta | S01.269 | glutamyl endopeptidase I | 1 | |
| DNA-directed RNA polymerase subunit beta | S41.011 | chlamydial protease-like activity factor | 3 | |
| Q9YAT8 | M04.001 | thermolysin | 17 | |
| DNA-directed RNA polymerase subunit D | Q9YB53 | M04.001 | thermolysin | 4 |
| DNA-directed RNA polymerase subunit F | Q9YEM9 | M04.001 | thermolysin | 1 |
| DNA-directed RNA polymerase subunit H | Q9YAT3 | M04.001 | thermolysin | 1 |
| DNA-directed RNA polymerase subunit omega | P0A803 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 |
| Q9EVV4 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | 1 | |
| DNA-directed RNA polymerase, mitochondrial | O00411 | C01.060 | cathepsin B | 1 |
| DNA-directed RNA polymerases I and III subunit RPAC1 | O15160 | S01.010 | granzyme B (Homo sapiens-type) | 1 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC2 | P61218 | C01.009 | cathepsin V | 1 |
| C13.004 | legumain, animal-type | 1 | ||
| DNA-directed RNA polymerases I, II, and III subunit RPABC3 | P52434 | M04.001 | thermolysin | 1 |
| S01.151 | trypsin 1 | 1 | ||
| DNA-directed RNA polymerases I, II, and III subunit RPABC4 | P53803 | C01.032 | cathepsin L | 1 |
| C01.034 | cathepsin S | 1 | ||
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 | P62875 | C01.032 | cathepsin L | 1 |
| P62876 | A01.009 | cathepsin D | 1 | |
| A01.010 | cathepsin E | 1 | ||
| DNA-repair protein XRCC1 | P18887 | M10.003 | matrix metallopeptidase-2 | 1 |
| S01.151 | trypsin 1 | 5 | ||
| S01.269 | glutamyl endopeptidase I | 1 | ||
| DNA-repair protein XRCC4 | Q13426 | C14.003 | caspase-3 | 1 |
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| DNA/RNA-binding protein Alba 1 | Q9YAW1 | M04.001 | thermolysin | 1 |
| DNA/RNA-binding protein Alba 2 | Q9YAX2 | M04.001 | thermolysin | 7 |
| DNA/RNA-binding protein KIN17 | O60870 | C01.060 | cathepsin B | 1 |
| DnaA initiator-associating protein DiaA | P66817 | S41.011 | chlamydial protease-like activity factor | 1 |
| dnaB domain protein helicase domain protein | D8FZ89 | N10.002 | intein-containing replicative DNA helicase precursor | 2 |
| dnaB helicase | D4TGG9 | N10.002 | intein-containing replicative DNA helicase precursor | 2 |
| D4TST7 | N10.002 | intein-containing replicative DNA helicase precursor | 2 | |
| Q2P9R2 | N10.002 | intein-containing replicative DNA helicase precursor | 1 | |
| dnaB protein | A8YI04 | N10.002 | intein-containing replicative DNA helicase precursor | 2 |
| dnaB-like protein helicase | Q1IWQ3 | N10.002 | intein-containing replicative DNA helicase precursor | 2 |
| DnaJ homolog subfamily A member 1 | P31689 | C01.009 | cathepsin V | 3 |
| C01.032 | cathepsin L | 5 | ||
| C01.034 | cathepsin S | 5 | ||
| C01.036 | cathepsin K | 6 | ||
| C14.005 | caspase-6 | 1 | ||
| M12.001 | astacin | 1 | ||
| M12.002 | meprin alpha subunit | 1 | ||
| S01.047 | human airway trypsin-like peptidase | 1 | ||
| DNAJ homolog subfamily A member 1 | S01.151 | trypsin 1 | 7 | |
| DnaJ homolog subfamily A member 1 | P63037 | M10.003 | matrix metallopeptidase-2 | 1 |
| DnaJ homolog subfamily A member 2 | O60884 | C01.009 | cathepsin V | 1 |
| C01.032 | cathepsin L | 2 | ||
| C01.036 | cathepsin K | 2 | ||
| C01.060 | cathepsin B | 1 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| DNAJ homolog subfamily A member 2 | S01.151 | trypsin 1 | 6 | |
| DnaJ homolog subfamily A member 2 | S01.269 | glutamyl endopeptidase I | 1 | |
| Q9QYJ0 | A01.010 | cathepsin E | 1 | |
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| S01.136 | granzyme B, rodent-type | 1 | ||
| DNAJ homolog subfamily A member 2 | S01.151 | trypsin 1 | 1 | |
| DnaJ homolog subfamily A member 4 | Q8WW22 | C01.036 | cathepsin K | 1 |
| DnaJ homolog subfamily B member 1 | P25685 | C01.032 | cathepsin L | 1 |
| C01.034 | cathepsin S | 4 | ||
| C01.036 | cathepsin K | 7 | ||
| C13.004 | legumain, animal-type | 1 | ||
| C14.004 | caspase-7 | 1 | ||
| M10.005 | matrix metallopeptidase-3 | 3 | ||
| S01.081 | kallikrein-related peptidase 15 | 2 | ||
| S01.151 | trypsin 1 | 6 | ||
| DNAJ homolog subfamily B member 11 | P81999 | XS26.001 | signal peptidase complex (animal) | 1 |
| DnaJ homolog subfamily B member 11 | Q99KV1 | A01.010 | cathepsin E | 1 |
| Q9UBS4 | C01.036 | cathepsin K | 4 | |
| C14.004 | caspase-7 | 1 | ||
| M12.004 | meprin beta subunit | 1 | ||
| S01.081 | kallikrein-related peptidase 15 | 2 | ||
| S01.151 | trypsin 1 | 3 | ||
| DNAJ homolog subfamily B member 11 precursor | S01.133 | cathepsin G | 1 | |
| S01.151 | trypsin 1 | 2 | ||
| S01.269 | glutamyl endopeptidase I | 1 | ||
| DnaJ homolog subfamily B member 11 precursor | XS26.001 | signal peptidase complex (animal) | 1 | |
| DnaJ homolog subfamily B member 6 | O75190 | M10.005 | matrix metallopeptidase-3 | 1 |
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| S01.151 | trypsin 1 | 1 | ||
| Q6FIC8 | C01.018 | cathepsin F | 3 | |
| C01.036 | cathepsin K | 1 | ||
| C01.060 | cathepsin B | 2 | ||
| DnaJ homolog subfamily B member 7 | Q7Z6W7 | C01.009 | cathepsin V | 1 |
| C01.018 | cathepsin F | 1 | ||
| C01.032 | cathepsin L | 1 | ||
| C01.036 | cathepsin K | 1 | ||
| M12.002 | meprin alpha subunit | 1 | ||
| DnaJ homolog subfamily C member 13 | O75165 | S01.151 | trypsin 1 | 1 |
| DnaJ homolog subfamily C member 17 | Q9NVM6 | C01.036 | cathepsin K | 3 |
| C01.060 | cathepsin B | 1 | ||
| dnaJ homolog subfamily C member 17 | S01.135 | granzyme A | 1 | |
| DnaJ homolog subfamily C member 2 | Q99543 | C01.009 | cathepsin V | 2 |
| C01.018 | cathepsin F | 1 | ||
| C01.032 | cathepsin L | 1 | ||
| C01.036 | cathepsin K | 6 | ||
| C01.060 | cathepsin B | 5 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| S01.139 | granzyme M | 4 | ||
| DNAJ homolog subfamily C member 2 | S01.151 | trypsin 1 | 2 | |
| DnaJ homolog subfamily C member 21 | Q5F1R6 | C01.036 | cathepsin K | 2 |
| DnaJ homolog subfamily C member 28 | Q9NX36 | C01.009 | cathepsin V | 1 |
| C01.018 | cathepsin F | 1 | ||
| DnaJ homolog subfamily C member 3 | Q13217 | C01.009 | cathepsin V | 2 |
| C01.018 | cathepsin F | 1 | ||
| C01.032 | cathepsin L | 1 | ||
| C01.036 | cathepsin K | 2 | ||
| S01.081 | kallikrein-related peptidase 15 | 1 | ||
| DnaJ homolog subfamily C member 5 | Q9H3Z4 | C14.004 | caspase-7 | 2 |
| S01.269 | glutamyl endopeptidase I | 2 | ||
| DnaJ homolog subfamily C member 7 | Q99615 | C01.009 | cathepsin V | 2 |
| C01.018 | cathepsin F | 4 | ||
| C01.032 | cathepsin L | 1 | ||
| C01.036 | cathepsin K | 7 | ||
| C01.060 | cathepsin B | 3 | ||
| C14.005 | caspase-6 | 1 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| DNAJ homolog subfamily C member 7 | S01.151 | trypsin 1 | 3 | |
| S01.269 | glutamyl endopeptidase I | 1 | ||
| DnaJ homolog subfamily C member 7 | Q9QYI3 | A01.010 | cathepsin E | 1 |
| DNAJ homolog subfamily C member 7 | S01.010 | granzyme B (Homo sapiens-type) | 2 | |
| S01.151 | trypsin 1 | 1 | ||
| DnaJ homolog subfamily C member 8 | O75937 | C01.009 | cathepsin V | 6 |
| C01.018 | cathepsin F | 10 | ||
| C01.032 | cathepsin L | 6 | ||
| C01.036 | cathepsin K | 14 | ||
| C01.060 | cathepsin B | 7 | ||
| C13.004 | legumain, animal-type | 1 | ||
| M04.001 | thermolysin | 1 | ||
| M12.004 | meprin beta subunit | 1 | ||
| S01.081 | kallikrein-related peptidase 15 | 1 | ||
| S01.151 | trypsin 1 | 1 | ||
| S01.269 | glutamyl endopeptidase I | 2 | ||
| Q6NZB0 | A01.009 | cathepsin D | 2 | |
| A01.010 | cathepsin E | 2 | ||
| DnaJ homolog subfamily C member 9 | Q8WXX5 | C01.036 | cathepsin K | 4 |
| C13.004 | legumain, animal-type | 1 | ||
| DNAJ homolog subfamily C member 9 | M10.003 | matrix metallopeptidase-2 | 1 | |
| DnaJ homolog subfamily C member 9 | M10.005 | matrix metallopeptidase-3 | 1 | |
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| S01.139 | granzyme M | 2 | ||
| DNAJ homolog subfamily C member 9 | S01.151 | trypsin 1 | 7 | |
| S01.269 | glutamyl endopeptidase I | 4 | ||
| Q91WN1 | S01.010 | granzyme B (Homo sapiens-type) | 1 | |
| S01.136 | granzyme B, rodent-type | 1 | ||
| S01.151 | trypsin 1 | 1 | ||
| Dnm1 dynamin | P39053 | C01.032 | cathepsin L | 1 |
| Dnp-Ala-Ala-Arg | M14.007 | carboxypeptidase T | 1 | |
| Dnp-Ala-Ala-Leu-Arg | M14.007 | carboxypeptidase T | 1 | |
| Dnp-Ala-Ala-Phe-Phe-Ala-Arg-NH2 | A01.001 | pepsin A | 1 | |
| A01.016 | aspergillopepsin I | 1 | ||
| Dnp-Arg-Ala-Glu-Gln-Gln-Arg-Leu-Lys-Ser-Gln-Asp-Leu | P06734 | M12.208 | ADAM8 peptidase | 2 |
| M12.210 | ADAM10 peptidase | 2 | ||
| Dnp-Arg-Met-Ala-Arg-Leu-Thr-Leu-EDDnp | M9G.030 | dynorphin-processing endopeptidase (metallo-type) | 1 | |
| Dnp-His-Gly-Asp-Gln-Met-Ala-Gln-Lys-Ser-Gln-Ser-Thr | M12.208 | ADAM8 peptidase | 1 | |
| M12.210 | ADAM10 peptidase | 1 | ||
| Dnp-Lys-Leu-Val-Glu-Ala-Leu-Tyr-Leu-Val-Lys | A01.064 | candidapepsin SAP6 | 1 | |
| Dnp-Lys-Leu-Val-Glu-Arg-Leu-Tyr-Leu-Val-Lys | A01.061 | candidapepsin SAP3 | 1 | |
| Dnp-Lys-Leu-Val-Glu-Asp-Leu-Tyr-Leu-Val-Lys | A01.061 | candidapepsin SAP3 | 1 | |
| A01.064 | candidapepsin SAP6 | 1 | ||
| Dnp-Lys-Leu-Val-Glu-Gln-Leu-Tyr-Leu-Val-Lys | A01.061 | candidapepsin SAP3 | 1 | |
| Dnp-Lys-Leu-Val-Glu-Glu-Leu-Tyr-Leu-Val-Lys | A01.061 | candidapepsin SAP3 | 1 | |
| A01.064 | candidapepsin SAP6 | 1 | ||
| Dnp-Lys-Leu-Val-Glu-Leu-Leu-Tyr-Leu-Val-Lys | A01.014 | candidapepsin SAP1 | 1 | |
| A01.060 | candidapepsin SAP2 | 1 | ||
| A01.061 | candidapepsin SAP3 | 1 | ||
| A01.064 | candidapepsin SAP6 | 1 | ||
| Dnp-Lys-Leu-Val-Glu-Lys-Leu-Tyr-Leu-Val-Lys | A01.014 | candidapepsin SAP1 | 1 | |
| A01.060 | candidapepsin SAP2 | 1 | ||
| A01.061 | candidapepsin SAP3 | 1 | ||
| A01.064 | candidapepsin SAP6 | 1 | ||
| Dnp-Lys-Leu-Val-Glu-Phe-Leu-Tyr-Leu-Val-Lys | A01.014 | candidapepsin SAP1 | 1 | |
| A01.060 | candidapepsin SAP2 | 1 | ||
| A01.061 | candidapepsin SAP3 | 1 | ||
| A01.064 | candidapepsin SAP6 | 1 | ||
| Dnp-Lys-Leu-Val-Glu-Ser-Leu-Tyr-Leu-Val-Lys | A01.064 | candidapepsin SAP6 | 1 | |
| Dnp-Lys-Leu-Val-Glu-Thr-Leu-Tyr-Leu-Val-Lys | A01.064 | candidapepsin SAP6 | 1 | |
| Dnp-Lys-Leu-Val-Glu-Tyr-Leu-Tyr-Leu-Val-Lys | A01.014 | candidapepsin SAP1 | 1 | |
| A01.060 | candidapepsin SAP2 | 1 | ||
| A01.061 | candidapepsin SAP3 | 1 | ||
| A01.064 | candidapepsin SAP6 | 1 | ||
| DNP-Pro-b-cyclohexyl-Ala-Gly-Cys(Me)-His-Ala-Lys(NMA)-NH2 | M10.038 | At5-MMP (Arabidopsis thaliana) | 1 | |
| Dnp-Pro-Cha-Ala-Gly-Cys(ME)-His-Ala-Lys-N-Me-Abz-NH2 | M12.215 | ADAM15 peptidase | 1 | |
| Dnp-Pro-Gln-Gly-Ile-Ala-Gly-Gln-D-Arg-OH | M10.002 | matrix metallopeptidase-8 | 1 | |
| Dnp-Pro-Glu-Ala-Asn-NH2 | C13.001 | legumain (plant beta form) | 1 | |
| Dnp-Pro-Leu-Ala-Leu-Trp-Ala-Arg | M10.001 | matrix metallopeptidase-1 | 1 | |
| Dnp-Pro-Leu-Gly-Ile-Ala-Gly-D-Arg | M10.008 | matrix metallopeptidase-7 | 1 | |
| Dnp-Pro-Leu-Gly-Leu-Trp-Ala-D-Arg-NH2 | M10.002 | matrix metallopeptidase-8 | 1 | |
| M10.012 | GM1-MMP (Glycine max) | 1 | ||
| Dnp-Pro-Leu-Gly-Pro-Trp-D-Lys | M03.003 | saccharolysin | 1 | |
| Dnp-Ser-Pro-Leu-Ala-Gln-Ala-Val-Arg-Ser-Ser-Ser-Arg-NH2 | M12.217 | ADAM17 peptidase | 1 | |
| Dnp-Ser-Pro-Leu-Ala-Gln-Phe-Val-Arg-Ser-Ser-Ser-Arg-NH2 | M12.217 | ADAM17 peptidase | 1 | |
| DNPEP protein | Q9BSS9 | M10.003 | matrix metallopeptidase-2 | 1 |
| S01.151 | trypsin 1 | 1 | ||
| Dns-Ala-Arg | M14.004 | carboxypeptidase N | 1 | |
| M14.006 | carboxypeptidase M | 1 | ||
| Dns-Gly-Gly-Phe | M14.001 | carboxypeptidase A1 | 1 | |
| Dns-Gly-Gly-Trp | M14.001 | carboxypeptidase A1 | 1 | |
| Dns-Gly-Phe | M14.001 | carboxypeptidase A1 | 1 | |
| Dns-Gly-Trp | M14.001 | carboxypeptidase A1 | 1 | |
| Dns-Phe-Ala-Arg | M14.005 | carboxypeptidase E | 1 | |
| M14.011 | metallocarboxypeptidase D peptidase unit 1 | 1 | ||
| M14.012 | metallocarboxypeptidase Z | 1 | ||
| M14.016 | metallocarboxypeptidase D peptidase unit 2 | 1 | ||
| XM14.001 | metallocarboxypeptidase D compound peptidase | 1 | ||
| Dns-Phe-Gly-Arg | M14.012 | metallocarboxypeptidase Z | 1 | |
| Dns-Phe-Phe-Arg | M14.012 | metallocarboxypeptidase Z | 1 | |
| Dns-Pro-Lys-Arg-Ala-Pro-Trp-Val | M12.001 | astacin | 1 | |
| DObeta-HLA | M08.001 | leishmanolysin | 1 | |
| DOCK4 protein | Q149N5 | S01.131 | elastase-2 | 1 |
| S01.151 | trypsin 1 | 1 | ||
| Docking protein 1 | Q99704 | C01.036 | cathepsin K | 1 |
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| Docking protein 2 | O70469 | A01.010 | cathepsin E | 1 |
| Docking protein 3 | Q7L591 | C01.032 | cathepsin L | 1 |
| Q9QZK7 | A01.009 | cathepsin D | 1 | |
| Dolichol-phosphate mannosyltransferase subunit 1 | O60762 | S01.151 | trypsin 1 | 3 |
| Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase | Q9Y672 | S01.280 | lysyl endopeptidase (bacteria) | 2 |
| Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit | P39656 | S01.151 | trypsin 1 | 6 |
| dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit | Q29381 | XS26.001 | signal peptidase complex (animal) | 1 |
| Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 | P04843 | A32.002 | RC1339 g.p. (Rickettsia conorii) | 1 |
| S01.151 | trypsin 1 | 15 | ||
| dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 | P41543 | S26.010 | signalase (animal) 21 kDa component | 1 |
| dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 precursor | P04843 | M10.003 | matrix metallopeptidase-2 | 2 |
| S01.151 | trypsin 1 | 1 | ||
| S01.269 | glutamyl endopeptidase I | 1 | ||
| Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 ECO:0000305 | C01.036 | cathepsin K | 1 | |
| Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 | P04844 | A32.002 | RC1339 g.p. (Rickettsia conorii) | 2 |
| S01.151 | trypsin 1 | 5 | ||
| dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 | XS26.001 | signal peptidase complex (animal) | 1 | |
| dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3 | P48439 | S26.010 | signalase (animal) 21 kDa component | 1 |
| Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 | P61803 | S01.151 | trypsin 1 | 2 |
| Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A | P46977 | S01.151 | trypsin 1 | 2 |
| Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B | Q8TCJ2 | S01.151 | trypsin 1 | 3 |
| dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit SWP1 | Q02795 | S26.010 | signalase (animal) 21 kDa component | 1 |
| Double-strand break repair protein MRE11 | P49959 | C01.036 | cathepsin K | 2 |
| C01.060 | cathepsin B | 1 | ||
| S01.269 | glutamyl endopeptidase I | 1 | ||
| Double-strand break repair protein MRE11A | M35.004 | peptidyl-Lys metallopeptidase | 2 | |
| double-strand break repair protein MRE11A | S01.010 | granzyme B (Homo sapiens-type) | 2 | |
| Q61216 | S01.010 | granzyme B (Homo sapiens-type) | 1 | |
| S01.136 | granzyme B, rodent-type | 1 | ||
| S01.151 | trypsin 1 | 1 | ||
| Double-strand-break repair protein rad21 homolog | O60216 | C01.036 | cathepsin K | 1 |
| C01.060 | cathepsin B | 1 | ||
| double-strand-break repair protein rad21 homolog | C14.003 | caspase-3 | 2 | |
| C14.004 | caspase-7 | 1 | ||
| Double-strand-break repair protein rad21 homolog | C14.005 | caspase-6 | 1 | |
| C14.006 | caspase-2 | 1 | ||
| double-strand-break repair protein rad21 homolog | C50.001 | separase (yeast-type) | 2 | |
| C50.002 | separase (Homo sapiens-type) | 2 | ||
| Double-strand-break repair protein rad21 homolog | S01.151 | trypsin 1 | 1 | |
| S01.302 | matriptase | 1 | ||
| Q61550 | A01.010 | cathepsin E | 1 | |
| Double-stranded RNA-binding protein Staufen homolog 1 | O95793 | C01.032 | cathepsin L | 2 |
| C01.034 | cathepsin S | 1 | ||
| M12.002 | meprin alpha subunit | 1 | ||
| M12.004 | meprin beta subunit | 1 | ||
| double-stranded RNA-binding protein Staufen homolog 1 | S01.135 | granzyme A | 1 | |
| Double-stranded RNA-binding protein Staufen homolog 1 | S01.139 | granzyme M | 2 | |
| double-stranded RNA-binding protein Staufen homolog 1 | S01.151 | trypsin 1 | 3 | |
| Double-stranded RNA-binding protein Staufen homolog 1 | Q9Y3Q2 | S01.021 | DESC1 peptidase | 1 |
| S01.047 | human airway trypsin-like peptidase | 1 | ||
| S01.308 | matriptase-2 | 1 | ||
| Q9Z108 | S01.137 | granzyme C | 1 | |
| Double-stranded RNA-binding protein Staufen homolog 1 isoform 3 | O95793-3 | S01.151 | trypsin 1 | 2 |
| Double-stranded RNA-binding protein Staufen homolog 2 | Q9NUL3 | S01.010 | granzyme B (Homo sapiens-type) | 1 |
| Double-stranded RNA-specific adenosine deaminase | P55265 | C01.009 | cathepsin V | 1 |
| C01.032 | cathepsin L | 1 | ||
| C01.034 | cathepsin S | 1 | ||
| C01.036 | cathepsin K | 3 | ||
| C01.060 | cathepsin B | 2 | ||
| double-stranded RNA-specific adenosine deaminase | M04.001 | thermolysin | 1 | |
| Double-stranded RNA-specific adenosine deaminase | M09.002 | collagenase G/A (Clostridium histolyticum) | 2 | |
| M09.005 | collagenase ColT (Clostridium tetani) | 2 | ||
| double-stranded RNA-specific adenosine deaminase | S01.001 | chymotrypsin A (cattle-type) | 2 | |
| Double-stranded RNA-specific adenosine deaminase | S01.010 | granzyme B (Homo sapiens-type) | 2 | |
| double-stranded RNA-specific adenosine deaminase | S01.135 | granzyme A | 1 | |
| Double-stranded RNA-specific adenosine deaminase | S01.139 | granzyme M | 2 | |
| double-stranded RNA-specific adenosine deaminase | S01.151 | trypsin 1 | 4 | |
| S01.269 | glutamyl endopeptidase I | 3 | ||
| Double-stranded RNA-specific adenosine deaminase | Q9BYM4 | C14.005 | caspase-6 | 1 |
| C14.006 | caspase-2 | 1 | ||
| doublecortin and CaM kinase-like 1 | Q5VZY9 | S01.151 | trypsin 1 | 2 |
| Doublecortin domain-containing protein 1 | P59894 | M35.004 | peptidyl-Lys metallopeptidase | 2 |
| Doublesex- and mab-3-related transcription factor B1 | Q96MA1 | S01.280 | lysyl endopeptidase (bacteria) | 2 |
| DPYSL3 protein | Q6DEN2 | S01.133 | cathepsin G | 1 |
| S01.151 | trypsin 1 | 7 | ||
| dr hemagglutinin structural subunit | P24093 | S26.001 | signal peptidase I | 1 |
| Dr1-associated corepressor | Q14919 | C01.018 | cathepsin F | 1 |
| dr1-associated corepressor | S01.151 | trypsin 1 | 2 | |
| draxin | Q8NBI3 | XS26.001 | signal peptidase complex (animal) | 1 |
| Drebrin | Q16643 | C01.036 | cathepsin K | 1 |
| C01.060 | cathepsin B | 1 | ||
| C13.004 | legumain, animal-type | 1 | ||
| M10.005 | matrix metallopeptidase-3 | 2 | ||
| M12.001 | astacin | 2 | ||
| S01.081 | kallikrein-related peptidase 15 | 1 | ||
| S01.151 | trypsin 1 | 1 | ||
| S01.269 | glutamyl endopeptidase I | 3 | ||
| Drebrin-like protein | Q62418 | A01.010 | cathepsin E | 2 |
| M10.003 | matrix metallopeptidase-2 | 1 | ||
| Q9HBN8 | C01.018 | cathepsin F | 3 | |
| C01.032 | cathepsin L | 1 | ||
| C01.036 | cathepsin K | 6 | ||
| C01.060 | cathepsin B | 5 | ||
| drebrin-like protein | Q9UJU6 | C14.003 | caspase-3 | 1 |
| Drebrin-like protein | M04.001 | thermolysin | 1 | |
| M09.002 | collagenase G/A (Clostridium histolyticum) | 1 | ||
| M09.003 | bacterial collagenase H | 1 | ||
| M09.005 | collagenase ColT (Clostridium tetani) | 2 | ||
| M10.005 | matrix metallopeptidase-3 | 2 | ||
| M12.004 | meprin beta subunit | 1 | ||
| S01.151 | trypsin 1 | 3 | ||
| S01.269 | glutamyl endopeptidase I | 2 | ||
| drebrin-like protein variant | Q59FH4 | M10.003 | matrix metallopeptidase-2 | 1 |
| S01.217 | thrombin | 1 | ||
| S01.269 | glutamyl endopeptidase I | 1 | ||
| drosulfakinins | P09040 | M13.014 | neprilysin-4 (Drosophila melanogaster) | 3 |
| DSP variant protein | Q4LE79 | S01.151 | trypsin 1 | 1 |
| S01.269 | glutamyl endopeptidase I | 1 | ||
| DSPP600 | Q6YBV4 | M10.003 | matrix metallopeptidase-2 | 2 |
| M10.019 | matrix metallopeptidase-20 | 1 | ||
| M12.002 | meprin alpha subunit | 2 | ||
| M12.004 | meprin beta subunit | 2 | ||
| M12.005 | procollagen C-peptidase | 2 | ||
| DT diphtheria toxin precursor | P00588 | S08.071 | furin | 1 |
| dTDP-4-dehydrorhamnose 3,5-epimerase | P37745 | S01.151 | trypsin 1 | 1 |
| dTDP-glucose 4,6-dehydratase 1 | P37759 | S01.151 | trypsin 1 | 1 |
| dTTP/UTP pyrophosphatase | P25536 | S41.011 | chlamydial protease-like activity factor | 1 |
| DTW domain-containing protein 2 | Q8NBA8 | S01.010 | granzyme B (Homo sapiens-type) | 1 |
| Dual oxidase maturation factor 2 | Q1HG44 | S01.280 | lysyl endopeptidase (bacteria) | 2 |
| Dual serine/threonine and tyrosine protein kinase | Q6XUX3 | M35.004 | peptidyl-Lys metallopeptidase | 2 |
| Dual specificity mitogen-activated protein kinase kinase 1 | P31938 | M10.003 | matrix metallopeptidase-2 | 1 |
| Q02750 | C01.060 | cathepsin B | 1 | |
| dual specificity mitogen-activated protein kinase kinase 1 | M10.003 | matrix metallopeptidase-2 | 1 | |
| Dual specificity mitogen-activated protein kinase kinase 1 | M12.004 | meprin beta subunit | 2 | |
| dual specificity mitogen-activated protein kinase kinase 1 | M34.001 | anthrax lethal factor | 1 | |
| S01.151 | trypsin 1 | 3 | ||
| Dual specificity mitogen-activated protein kinase kinase 1 | Q02750-2 | M12.002 | meprin alpha subunit | 1 |
| dual specificity mitogen-activated protein kinase kinase 2 | P36507 | A02.001 | HIV-1 retropepsin | 1 |
| Dual specificity mitogen-activated protein kinase kinase 2 | C01.032 | cathepsin L | 1 | |
| C14.004 | caspase-7 | 1 | ||
| dual specificity mitogen-activated protein kinase kinase 2 | M34.001 | anthrax lethal factor | 1 | |
| Dual specificity mitogen-activated protein kinase kinase 2 | S01.047 | human airway trypsin-like peptidase | 1 | |
| S01.072 | matriptase-3 | 1 | ||
| dual specificity mitogen-activated protein kinase kinase 2 | S01.151 | trypsin 1 | 3 | |
| Dual specificity mitogen-activated protein kinase kinase 2 | S01.269 | glutamyl endopeptidase I | 1 | |
| Dual specificity mitogen-activated protein kinase kinase 3 | P46734 | C01.018 | cathepsin F | 1 |
| C01.036 | cathepsin K | 2 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| Dual specificity mitogen-activated protein kinase kinase 4 | P45985 | C01.060 | cathepsin B | 1 |
| Dual specificity mitogen-activated protein kinase kinase 6 | P52564 | C01.036 | cathepsin K | 1 |
| dual specificity mitogen-activated protein kinase kinase 6 | P70236 | S01.010 | granzyme B (Homo sapiens-type) | 1 |
| S01.136 | granzyme B, rodent-type | 1 | ||
| S01.151 | trypsin 1 | 1 | ||
| Dual specificity mitogen-activated protein kinase kinase 7 | O14733 | M34.001 | anthrax lethal factor | 2 |
| Dual specificity protein phosphatase 23 | Q9BVJ7 | C01.009 | cathepsin V | 1 |
| S01.151 | trypsin 1 | 2 | ||
| Dual specificity protein phosphatase 3 | P51452 | S01.151 | trypsin 1 | 2 |
| Dual specificity protein phosphatase 7 | Q16829 | C14.005 | caspase-6 | 2 |
| Dual specificity protein phosphatase 8 | Q13202 | M12.004 | meprin beta subunit | 1 |
| Dual-specificity RNA methyltransferase RlmN | P36979 | M12.225 | ADAMTS5 peptidase | 1 |
| DUBA deubiquitinylating enzyme | Q96G74 | S01.151 | trypsin 1 | 2 |
| DUF5655 domain-containing protein | B2V8L8 | S16.013 | CRISPR-associated Lon protease | 1 |
| DUTP pyrophosphatase | Q6NSA3 | S01.151 | trypsin 1 | 4 |
| dynactin 1 isoform 1 variant | Q59F36 | S01.151 | trypsin 1 | 4 |
| Dynactin subunit 1 | O08788 | A01.009 | cathepsin D | 1 |
| M10.003 | matrix metallopeptidase-2 | 1 | ||
| Q14203 | C13.004 | legumain, animal-type | 1 | |
| dynactin subunit 1 | S01.151 | trypsin 1 | 15 | |
| Dynactin subunit 1 | Q9UIU1 | C01.036 | cathepsin K | 1 |
| C01.060 | cathepsin B | 2 | ||
| Dynactin subunit 1, isoform 5 | Q14203-5 | M10.003 | matrix metallopeptidase-2 | 3 |
| S01.151 | trypsin 1 | 2 | ||
| S01.269 | glutamyl endopeptidase I | 1 | ||
| dynactin subunit 2 | Q13561 | A02.001 | HIV-1 retropepsin | 1 |
| Dynactin subunit 2 | C01.018 | cathepsin F | 5 | |
| C01.032 | cathepsin L | 2 | ||
| C01.034 | cathepsin S | 3 | ||
| dynactin subunit 2 | C01.036 | cathepsin K | 10 | |
| Dynactin subunit 2 | C01.060 | cathepsin B | 3 | |
| M09.005 | collagenase ColT (Clostridium tetani) | 1 | ||
| dynactin subunit 2 | M10.003 | matrix metallopeptidase-2 | 6 | |
| Dynactin subunit 2 | M10.005 | matrix metallopeptidase-3 | 3 | |
| M12.002 | meprin alpha subunit | 1 | ||
| M12.004 | meprin beta subunit | 1 | ||
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| S01.081 | kallikrein-related peptidase 15 | 2 | ||
| dynactin subunit 2 | S01.131 | elastase-2 | 1 | |
| Dynactin subunit 2 | S01.136 | granzyme B, rodent-type | 1 | |
| dynactin subunit 2 | S01.151 | trypsin 1 | 17 | |
| Dynactin subunit 2 | S01.224 | hepsin | 1 | |
| dynactin subunit 2 | S01.269 | glutamyl endopeptidase I | 7 | |
| Dynactin subunit 2 | S01.302 | matriptase | 1 | |
| Q99KJ8 | A01.009 | cathepsin D | 3 | |
| A01.010 | cathepsin E | 3 | ||
| dynactin subunit 2 | M10.003 | matrix metallopeptidase-2 | 1 | |
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| S01.151 | trypsin 1 | 1 | ||
| Dynactin subunit 3 | O75935 | C01.060 | cathepsin B | 1 |
| M10.005 | matrix metallopeptidase-3 | 1 | ||
| S01.269 | glutamyl endopeptidase I | 1 | ||
| Dynactin subunit 4 | Q8CBY8 | A01.010 | cathepsin E | 2 |
| Q9UJW0 | C01.036 | cathepsin K | 1 | |
| C14.005 | caspase-6 | 1 | ||
| M10.005 | matrix metallopeptidase-3 | 1 | ||
| S01.280 | lysyl endopeptidase (bacteria) | 1 | ||
| Dynactin subunit 6 | O00399 | M04.001 | thermolysin | 1 |
| S01.010 | granzyme B (Homo sapiens-type) | 1 | ||
| Q9WUB4 | A01.009 | cathepsin D | 1 | |
| dynamin 2 isoform 4 variant | Q59G96 | S01.151 | trypsin 1 | 2 |
| S01.217 | thrombin | 1 | ||
| S01.269 | glutamyl endopeptidase I | 1 | ||
| Dynamin-1 | Q05193 | C01.009 | cathepsin V | 1 |
| C01.032 | cathepsin L | 1 | ||
| C13.004 | legumain, animal-type | 1 | ||
| Dynamin-1-like protein | O00429 | S01.151 | trypsin 1 | 1 |
| Q7L6B3 | C01.032 | cathepsin L | 1 | |
| C01.036 | cathepsin K | 5 | ||
| C01.060 | cathepsin B | 2 | ||
| dynamin-1-like protein (EC 3.6.5.5) | O00429 | M35.004 | peptidyl-Lys metallopeptidase | 2 |
| S01.151 | trypsin 1 | 10 | ||
| Dynamin-2 | P50570 | C01.009 | cathepsin V | 1 |
| C01.032 | cathepsin L | 2 | ||
| C01.036 | cathepsin K | 3 | ||
| M04.001 | thermolysin | 1 | ||
| M12.033 | LAST_MAM peptidase (Limulus-type) | 1 | ||
| dynamin-2 | S01.151 | trypsin 1 | 11 | |
| Dynamin-2 | S01.308 | matriptase-2 | 1 | |
| Dynamin-3 | Q9NQ68 | C01.032 | cathepsin L | 1 |
| C01.036 | cathepsin K | 1 | ||
| Dynamin-binding protein | Q6XZF7 | S01.280 | lysyl endopeptidase (bacteria) | 2 |
| Dynamin-like 120 kDa protein, mitochondrial | O60313 | C01.009 | cathepsin V | 1 |
| C01.032 | cathepsin L | 1 | ||
| dynamin-like 120 kDa protein, mitochondrial | M41.003 | m-AAA peptidase | 2 | |
| M48.018 | Oma1 peptidase | 1 | ||
| Dynamin-like 120 kDa protein, mitochondrial | Q2TA68 | M41.006 | paraplegin | 1 |
| DYNC2H1 variant protein | B0I1S0 | A02.001 | HIV-1 retropepsin | 1 |
| S01.151 | trypsin 1 | 1 | ||
| Dynein axonemal assembly factor 1 | Q8NEP3 | C01.036 | cathepsin K | 1 |
| Dynein axonemal assembly factor 10 ECO:0000305 | Q96MX6 | C01.036 | cathepsin K | 1 |
| Dynein axonemal assembly factor 5 ECO:0000303|PubMed:25232951, ECO:0000312|HGNC:HGNC:26013 | Q86Y56 | C01.009 | cathepsin V | 1 |
| Dynein heavy chain 1, axonemal | Q9P2D7 | M35.004 | peptidyl-Lys metallopeptidase | 4 |
| Dynein heavy chain 17, axonemal | Q9UFH2 | S01.280 | lysyl endopeptidase (bacteria) | 2 |
| Dynein heavy chain 5, axonemal | Q8TE73 | M35.004 | peptidyl-Lys metallopeptidase | 2 |
| S01.135 | granzyme A | 1 | ||
| Dynein heavy chain 6, axonemal | Q9C0G6 | S01.280 | lysyl endopeptidase (bacteria) | 2 |
| Dynein heavy chain 7, axonemal | Q8WXX0 | M35.004 | peptidyl-Lys metallopeptidase | 3 |
| S01.280 | lysyl endopeptidase (bacteria) | 2 | ||
| Dynein heavy chain 8, axonemal | Q96JB1 | M35.004 | peptidyl-Lys metallopeptidase | 2 |
| Dynein light chain 1, axonemal | Q4LDG9 | S01.269 | glutamyl endopeptidase I | 1 |
| Dynein light chain 1, cytoplasmic | P63167 | C14.005 | caspase-6 | 1 |
| S01.010 | granzyme B (Homo sapiens-type) | 2 | ||
| S01.021 | DESC1 peptidase | 2 | ||
| S01.047 | human airway trypsin-like peptidase | 1 | ||
| S01.302 | matriptase | 1 | ||
| S01.308 | matriptase-2 | 1 | ||
| Dynein light chain 2, cytoplasmic | Q96FJ2 | C01.036 | cathepsin K | 1 |
| M35.004 | peptidyl-Lys metallopeptidase | 1 | ||
| S01.081 | kallikrein-related peptidase 15 | 1 | ||
| dynein light chain 2, cytoplasmic | S01.151 | trypsin 1 | 5 | |
| Dynein light chain roadblock-type 1 | P62627 | M10.003 | matrix metallopeptidase-2 | 1 |
| dynein light chain roadblock-type 1 | Q9NP97 | S01.151 | trypsin 1 | 3 |
| Dynein light chain Tctex-type 1 | P63172 | C01.009 | cathepsin V | 1 |
| C01.032 | cathepsin L | 1 | ||
| dynein light chain Tctex-type 1 | M10.003 | matrix metallopeptidase-2 | 1 | |
| S01.001 | chymotrypsin A (cattle-type) | 1 | ||
| S01.151 | trypsin 1 | 3 | ||
| dynein, cytoplasmic, intermediate polypeptide 2 variant | Q59GU5 | A02.001 | HIV-1 retropepsin | 1 |
| M10.003 | matrix metallopeptidase-2 | 1 | ||
| S01.133 | cathepsin G | 1 | ||
| S01.151 | trypsin 1 | 2 | ||
| dynein, light chain, roadblock-type 1 | B1AKR6 | S01.151 | trypsin 1 | 2 |
| dynein, light chain, Tctex-type 1 | Q5VTU3 | S01.151 | trypsin 1 | 3 |
| Dynorphin A | P01213 | S53.007 | aorsin | 1 |
| XP01.001 | tricorn peptidase complex | 5 | ||
| P01214 | A01.030 | yapsin-1 | 1 | |
| dynorphin A (1-13) | P01213 | A26.001 | omptin | 1 |
| Dynorphin A (1-13) | C02.002 | calpain-2 | 1 | |
| dynorphin A (1-13) | M02.006 | angiotensin-converting enzyme-2 | 1 | |
| Dynorphin A 1-13 | C01.040 | cathepsin H | 1 | |
| Dynorphin A 1-17 | M03.002 | neurolysin | 2 | |
| Dynorphin A 1-8 | M02.001 | angiotensin-converting enzyme peptidase unit 1 | 1 | |
| M03.001 | thimet oligopeptidase | 2 | ||
| M03.002 | neurolysin | 1 | ||
| dynorphin A(1-13) | P01214 | C02.001 | calpain-1 | 1 |
| M11.001 | gametolysin | 1 | ||
| M14.006 | carboxypeptidase M | 1 | ||
| M16.002 | insulysin | 1 | ||
| M16.009 | eupitrilysin | 3 | ||
| M16.016 | YMXG peptidase | 4 | ||
| M35.001 | penicillolysin | 2 | ||
| S08.145 | sporangin | 1 | ||
| S09.001 | prolyl oligopeptidase | 1 | ||
| dynorphin A(1-17) | P01213 | M10.060 | epralysin | 1 |
| M16.009 | eupitrilysin | 3 | ||
| M16.016 | YMXG peptidase | 5 | ||
| Dynorphin A(1-17) | P06300 | M16.005 | nardilysin | 1 |
| dynorphin A(1-8) | P01213 | C01.060 | cathepsin B | 1 |
| M01.026 | aminopeptidase Q | 1 | ||
| S53.003 | tripeptidyl-peptidase I | 1 | ||
| dynorphin A(10-17) | M14.018 | carboxypeptidase A6 | 1 | |
| dynorphin A(2-8) | M01.026 | aminopeptidase Q | 1 | |
| dynorphin A(3-8) | M01.026 | aminopeptidase Q | 1 | |
| dynorphin A1-16 | P01214 | M9G.026 | dactylysin | 1 |
| dynorphin B | P01213 | M13.003 | endothelin-converting enzyme 2 | 2 |
| M16.009 | eupitrilysin | 2 | ||
| Dynorphin B | P01214 | A01.030 | yapsin-1 | 1 |
| dynorphin-(1-9) | P01213 | M13.001 | neprilysin | 3 |
| Dysbindin domain-containing protein 2 | Q9BQY9 | M04.001 | thermolysin | 2 |
| Dysferlin | Q09EX5 | S01.081 | kallikrein-related peptidase 15 | 1 |
| Dystonin | Q03001 | C13.004 | legumain, animal-type | 1 |
| S01.151 | trypsin 1 | 6 | ||
| Q03001-8 | S01.010 | granzyme B (Homo sapiens-type) | 2 | |
| Q96DQ5 | A32.002 | RC1339 g.p. (Rickettsia conorii) | 1 | |
| Dystrobrevin beta | O60941 | S01.280 | lysyl endopeptidase (bacteria) | 1 |
| Dystroglycan | Q14118 | C13.004 | legumain, animal-type | 2 |
| M04.001 | thermolysin | 1 | ||
| Q62165 | M10.003 | matrix metallopeptidase-2 | 2 | |
| dystroglycan precursor | Q14118 | S72.001 | dystroglycan | 1 |
| dystrophin | P11531 | C03.020 | enterovirus picornain 2A | 1 |
| P11532 | C02.001 | calpain-1 | 5 | |
| C02.002 | calpain-2 | 2 | ||
| dystrophin Homo sapiens | C03.020 | enterovirus picornain 2A | 1 |
