Substrates for peptidase S01.136: granzyme B, rodent-type

Summary Gene structure Alignment Tree Sequences Sequence features Distribution Structure Literature Substrates

Peptide and protein substrates that are thought to be physiologically relevant are indicated by P. Peptide and protein substrates that are thought to be pathologically relevant are indicated by D. Peptide and protein substrates that are not physiologically relevant are indicated by N. Synthetic substrates are indicated by S. Click on the symbol to show only physiological, non-physiological or synthetic substrates, or here to display all substrates. How cleavage sites have been identified are indicated by the following evidence codes: NT = N-terminal sequencing, MS = mass spectroscopy, MU = mutation, CS = consensus sequence, LC = liquid chromatography. To see all annotated cleavages for a protein substrate, click on the UniProt Accession.

Substrate	Uniprot	Residue range	Cleavage Site	Cleavage type	Evidence	P4	P3	P2	P1	P1'	P2'	P3'	P4'	Reference	CutDB
116 kDa U5 small nuclear ribonucleoprotein component	O08810	1-971	peptide-Asp18+Ser-peptide	P	MS	Pro	Glu	Leu	Asp	Ser	Asp	Glu	Asp	Van Damme et al., 2009
116 kDa U5 small nuclear ribonucleoprotein component	Q15029	1-972	peptide-Asp169+Ile-peptide	P	MS	Cys	Tyr	Thr	Asp	Ile	Leu	Phe	Thr	Van Damme et al., 2009
13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030443I12 product:programmed cell death protein 11,	Q3TSU4	1-1014	peptide-Asp30+Asn-peptide	P	MS	Val	Glu	Gln	Asp	Asn	Leu	Phe	Asp	Van Damme et al., 2009	25708
17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920046K16 product:Splicing factor arginine/serine-rich 11	Q3UIX4	1-476	peptide-Asp408+Lys-peptide	P	MS	Ser	Glu	Ser	Asp	Lys	Asp	Val	Lys	Van Damme et al., 2009	25712
17 days embryo stomach cDNA, RIKEN full-length enriched library, clone:I920024M16 product:Hypothetical ribosomal protein L1 cont	Q3TH37	1-452	peptide-Asp20+Val-peptide	P	MS	Thr	Thr	Thr	Asp	Val	Gln	Val	Thr	Van Damme et al., 2009
28 kDa heat- and acid-stable phosphoprotein	Q3UHX2	1-181	peptide-Asp61+Glu-peptide	P	MS	Leu	Asp	Ser	Asp	Glu	Ser	Glu	Asp	Van Damme et al., 2009
4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430318L23 product:splicing factor, arginine/serine-	Q3USH5	1-845	peptide-Asp156+Tyr-peptide	P	MS	Tyr	Gly	Ser	Asp	Tyr	Tyr	Asp	Pro	Van Damme et al., 2009
40S ribosomal protein S11	P62280	2-158	peptide-Glu27+Thr-peptide	P	MS	Leu	Leu	Gly	Glu	Thr	Gly	Lys	Glu	Van Damme et al., 2009
40S ribosomal protein S11	P62281	2-158	peptide-Glu27+Thr-peptide	P	MS	Leu	Leu	Gly	Glu	Thr	Gly	Lys	Glu	Van Damme et al., 2009
40S ribosomal protein S15	P62843	2-145	peptide-Asp23+Gln-peptide	P	MS	Val	Asp	Leu	Asp	Gln	Leu	Leu	Asp	Van Damme et al., 2009
40S ribosomal protein S15	P62841	2-145	peptide-Asp27+Met-peptide	P	MS	Gln	Leu	Leu	Asp	Met	Ser	Tyr	Glu	Van Damme et al., 2009
40S ribosomal protein S15	P62843	2-145	peptide-Asp27+Met-peptide	P	MS	Gln	Leu	Leu	Asp	Met	Ser	Tyr	Glu	Van Damme et al., 2009
40S ribosomal protein S15	P62843	2-145	peptide-Glu31+Gln-peptide	P	MS	Met	Ser	Tyr	Glu	Gln	Leu	Met	Gln	Van Damme et al., 2009
40S ribosomal protein S15a	P62245	2-130	peptide-Asp9+Ala-peptide	P	MS	Val	Leu	Ala	Asp	Ala	Leu	Lys	Ser	Van Damme et al., 2009
40S ribosomal protein S15a	P62244	2-130	peptide-Asp9+Ala-peptide	P	MS	Val	Leu	Ala	Asp	Ala	Leu	Lys	Ser	Van Damme et al., 2009
40S ribosomal protein S17	P63276	2-135	peptide-Glu37+Ile-peptide	P	MS	Val	Cys	Glu	Glu	Ile	Ala	Ile	Ile	Van Damme et al., 2009
40S ribosomal protein S21	Q9CQR2	1-83	peptide-Asp4+Ala-peptide	P	MS	-	Gln	Asn	Asp	Ala	Gly	Glu	Phe	Van Damme et al., 2009
40S ribosomal protein S21	P63220	1-83	peptide-Asp4+Ala-peptide	P	MS	Met	Gln	Asn	Asp	Ala	Gly	Glu	Phe	Van Damme et al., 2009
40S ribosomal protein S25	P62852	1-125	peptide-Asp51+Lys-peptide	P	MS	Val	Leu	Phe	Asp	Lys	Ala	Thr	Tyr	Van Damme et al., 2009	25721
40S ribosomal protein S3a	P97351	2-264	peptide-Asp73+Leu-peptide	P	MS	Ser	Leu	Ala	Asp	Leu	Gln	Asn	Asp	Van Damme et al., 2009
40S ribosomal protein S3a	P61247	2-264	peptide-Asp73+Leu-peptide	P	MS	Ser	Leu	Ala	Asp	Leu	Gln	Asn	Asp	Van Damme et al., 2009
40S ribosomal protein S4, X isoform	P62702	2-263	peptide-Asp21+Lys-peptide	P	MS	Trp	Met	Leu	Asp	Lys	Leu	Thr	Gly	Van Damme et al., 2009
40S ribosomal protein S4, X isoform	P62701	1-263	peptide-Asp21+Lys-peptide	N	MS	Trp	Met	Leu	Asp	Lys	Leu	Thr	Gly	Van Damme et al., 2009
40S ribosomal protein S4, X isoform	P62702	2-263	peptide-Asp176+Thr-peptide	P	MS	Ile	Lys	Phe	Asp	Thr	Gly	Asn	Leu	Van Damme et al., 2009
40S ribosomal protein S4, Y isoform 1	P22090	1-263	peptide-Asp21+Lys-peptide	P	MS	Trp	Met	Leu	Asp	Lys	Leu	Thr	Gly	Van Damme et al., 2009
40S ribosomal protein S4, Y isoform 2	Q8TD47	1-263	peptide-Asp21+Lys-peptide	P	MS	Trp	Met	Leu	Asp	Lys	Leu	Thr	Gly	Van Damme et al., 2009
40S ribosomal protein S6	P62753	1-249	peptide-Asn105+Leu-peptide	P	MS	Val	Asp	Ala	Asn	Leu	Ser	Val	Leu	Van Damme et al., 2009
40S ribosomal protein S7	P62082	1-194	peptide-Asp127+Ala-peptide	P	MS	Ala	Val	His	Asp	Ala	Ile	Leu	Glu	Van Damme et al., 2009
40S ribosomal protein S7	P62081	1-194	peptide-Asn33+Ser-peptide	P	MS	Leu	Glu	Met	Asn	Ser	Asp	Leu	Lys	Van Damme et al., 2009
40S ribosomal protein S7	P62081	1-194	peptide-Asp127+Ala-peptide	P	MS	Ala	Val	His	Asp	Ala	Ile	Leu	Glu	Van Damme et al., 2009
40S ribosomal protein S7	P62082	1-194	peptide-Asp132+Leu-peptide	P	MS	Ile	Leu	Glu	Asp	Leu	Val	Phe	Pro	Van Damme et al., 2009
40S ribosomal protein S8	P62241	2-208	peptide-Glu132+Glu-peptide	P	MS	Leu	Thr	Pro	Glu	Glu	Glu	Glu	Ile	Van Damme et al., 2009
40S ribosomal protein S8	P62242	2-208	peptide-Glu132+Glu-peptide	P	MS	Leu	Thr	Pro	Glu	Glu	Glu	Glu	Ile	Van Damme et al., 2009
6-phosphofructokinase type C	Q01813	1-784	peptide-Asp553+Thr-peptide	P	MS	Ile	Gly	Ala	Asp	Thr	Ala	Leu	Asn	Van Damme et al., 2009
6-phosphofructokinase type C	Q01813	1-784	peptide-Leu556+Asn-peptide	P	MS	Asp	Thr	Ala	Leu	Asn	Thr	Ile	Thr	Van Damme et al., 2009
6-phosphofructokinase type C	Q01813	1-784	peptide-Asp601+Ala-peptide	P	MS	Ala	Gly	Ala	Asp	Ala	Ala	Tyr	Ile	Van Damme et al., 2009
6-phosphofructokinase type C	Q9WUA3	1-784	peptide-Asp552+Thr-peptide	P	MS	Ile	Gly	Ala	Asp	Thr	Ala	Leu	Asn	Van Damme et al., 2009
6-phosphofructokinase, liver type	P17858	2-780	peptide-Asp542+Thr-peptide	P	MS	Leu	Gly	Ser	Asp	Thr	Ala	Val	Asn	Van Damme et al., 2009
6-phosphofructokinase, muscle type	P47857	2-780	peptide-Asp543+Thr-peptide	P	MS	Ile	Gly	Ala	Asp	Thr	Ala	Leu	Asn	Van Damme et al., 2009
6-phosphofructokinase, muscle type	P47857	2-780	peptide-Asp591+Ala-peptide	P	MS	Ala	Gly	Ala	Asp	Ala	Ala	Tyr	Ile	Van Damme et al., 2009
60S ribosomal protein L10	Q6ZWV3	2-214	peptide-Asp55+Glu-peptide	P	MS	Met	Val	Ser	Asp	Glu	Tyr	Glu	Gln	Van Damme et al., 2009
60S ribosomal protein L10	P27635	2-214	peptide-Asp179+Glu-peptide	P	MS	Phe	Asn	Ala	Asp	Glu	Phe	Glu	Asp	Van Damme et al., 2009
60S ribosomal protein L10-like	P86048	1-214	peptide-Asp55+Glu-peptide	P	MS	Met	Val	Ser	Asp	Glu	Tyr	Glu	Gln	Van Damme et al., 2009
60S ribosomal protein L11	Q9CXW4	2-178	peptide-Asp4+Gln-peptide	P	MS	-	-	Gln	Asp	Gln	Gly	Glu	Lys	Van Damme et al., 2009
60S ribosomal protein L13	P47963	2-211	peptide-Asp138+Ser-peptide	P	MS	Lys	Lys	Gly	Asp	Ser	Ser	Ala	Glu	Van Damme et al., 2009
60S ribosomal protein L13	P26373	1-211	peptide-Asp138+Ser-peptide	P	MS	Lys	Lys	Gly	Asp	Ser	Ser	Ala	Glu	Van Damme et al., 2009
60S ribosomal protein L13a	P40429	2-203	peptide-Ala122+Ala-peptide	P	MS	Val	Val	Pro	Ala	Ala	Leu	Lys	Val	Van Damme et al., 2009
60S ribosomal protein L18	P35980	2-188	peptide-Asp124+Gln-peptide	P	MS	Leu	Thr	Phe	Asp	Gln	Leu	Ala	Leu	Van Damme et al., 2009
60S ribosomal protein L23a	P62750	2-156	peptide-Asp131+Gly-peptide	P	MS	Ile	Arg	Pro	Asp	Gly	Glu	Lys	Lys	Van Damme et al., 2009
60S ribosomal protein L26	P61254	1-145	peptide-Asp52+Asp-peptide	P	MS	Ile	Arg	Lys	Asp	Asp	Glu	Val	Gln	Van Damme et al., 2009
60S ribosomal protein L26-like 1	Q9UNX3	1-145	peptide-Asp52+Asp-peptide	P	MS	Ile	Arg	Lys	Asp	Asp	Glu	Val	Gln	Van Damme et al., 2009
60S ribosomal protein L28	P41105	2-137	peptide-Asp56+Gly-peptide	P	MS	Pro	Ala	Ala	Asp	Gly	Lys	Gly	Val	Van Damme et al., 2009
60S ribosomal protein L28	P46779	2-137	peptide-Asp56+Gly-peptide	P	MS	Pro	Ala	Ala	Asp	Gly	Lys	Gly	Val	Van Damme et al., 2009
60S ribosomal protein L3	P27659	2-403	peptide-Asp214+Glu-peptide	P	MS	Phe	Gly	Gln	Asp	Glu	Met	Ile	Asp	Van Damme et al., 2009
60S ribosomal protein L3	P27659	2-403	peptide-Asp218+Val-peptide	P	MS	Glu	Met	Ile	Asp	Val	Ile	Gly	Val	Van Damme et al., 2009
60S ribosomal protein L35	Q6ZWV7	2-123	peptide-Asp22+Asp-peptide	P	MS	Lys	Gln	Leu	Asp	Asp	Leu	Lys	Val	Van Damme et al., 2009
60S ribosomal protein L4	Q9D8E6	2-419	peptide-Asp214+Asn-peptide	P	MS	Tyr	Asn	Glu	Asp	Asn	Gly	Ile	Ile	Van Damme et al., 2009
60S ribosomal protein L4	P36578	2-427	peptide-Asp214+Asn-peptide	P	MS	Tyr	Asn	Glu	Asp	Asn	Gly	Ile	Ile	Van Damme et al., 2009
60S ribosomal protein L5	P46777	1-297	peptide-Asp40+Lys-peptide	N	MS	Val	Ile	Gln	Asp	Lys	Asn	Lys	Tyr	Van Damme et al., 2009
60S ribosomal protein L5	P46777	2-297	peptide-Asp128+Glu-peptide	P	MS	Val	Thr	Gly	Asp	Glu	Tyr	Asn	Val	Van Damme et al., 2009
60S ribosomal protein L6	P47911	2-296	peptide-Asp242+Thr-peptide	P	MS	Glu	Ile	Phe	Asp	Thr	Glu	Lys	Glu	Van Damme et al., 2009
60S ribosomal protein L7	P14148	1-270	peptide-Glu38+Thr-peptide	P	MS	Ala	Val	Pro	Glu	Thr	Leu	Lys	Lys	Van Damme et al., 2009
60S ribosomal protein L7	P18124	1-248	peptide-Glu16+Thr-peptide	P	MS	Ala	Val	Pro	Glu	Thr	Leu	Lys	Lys	Van Damme et al., 2009
60S ribosomal protein L9	P51410	1-192	peptide-Glu44+Leu-peptide	P	MS	Ile	Asn	Val	Glu	Leu	Ser	Leu	Leu	Van Damme et al., 2009
A-kinase anchor protein 8	Q9DBR0	1-687	peptide-Asp319+Ser-peptide	P	MS	Ala	Arg	Ala	Asp	Ser	Asp	Gly	Asp	Van Damme et al., 2009
A-kinase anchor protein 8	O43823	1-692	peptide-Asp576+Val-peptide	P	MS	Val	Ala	Ala	Asp	Val	Leu	Ala	Glu	Van Damme et al., 2009
A-kinase anchor protein 8-like	Q9ULX6	1-646	peptide-Asp108+Met-peptide	P	MS	Leu	Glu	Thr	Asp	Met	Met	Gln	Gly	Van Damme et al., 2009
acidic leucine-rich nuclear phosphoprotein 32 family member A	O35381	1-247	peptide-Asp218+Asp-peptide	P	MS	Gly	Glu	Val	Asp	Asp	Glu	Glu	Asp	Van Damme et al., 2009
Acidic leucine-rich nuclear phosphoprotein 32 family member A	O35381	1-247	peptide-Glu216+Val-peptide	P	MS	Asn	Asp	Gly	Glu	Val	Asp	Asp	Glu	Van Damme et al., 2009
Acidic leucine-rich nuclear phosphoprotein 32 family member A	O35381	1-247	peptide-Glu220+Glu-peptide	P	MS	Val	Asp	Asp	Glu	Glu	Asp	Glu	Glu	Van Damme et al., 2009
acidic leucine-rich nuclear phosphoprotein 32 family member B	Q9EST5	1-272	peptide-Asp240+Glu-peptide	P	MS	Val	Asp	Glu	Asp	Glu	Glu	Asp	Glu	Van Damme et al., 2009
acidic leucine-rich nuclear phosphoprotein 32 family member B	Q9EST5	1-272	peptide-Asp243+Glu-peptide	P	MS	Asp	Glu	Glu	Asp	Glu	Asp	Glu	Asp	Van Damme et al., 2009
acidic leucine-rich nuclear phosphoprotein 32 family member E	P97822	1-260	peptide-Asp229+Glu-peptide	P	MS	Asp	Tyr	Val	Asp	Glu	Gly	Glu	Glu	Van Damme et al., 2009
Acidic leucine-rich nuclear phosphoprotein 32 family member E	P97822	1-260	peptide-Glu232+Glu-peptide	P	MS	Asp	Glu	Gly	Glu	Glu	Glu	Glu	Glu	Van Damme et al., 2009
Actin, alpha cardiac muscle 1	P68033	3-377	peptide-Asp246+Gly-peptide	P	MS	Glu	Leu	Pro	Asp	Gly	Gln	Val	Ile	Van Damme et al., 2009
Actin, alpha skeletal muscle	P68134	3-377	peptide-Asp246+Gly-peptide	P	MS	Glu	Leu	Pro	Asp	Gly	Gln	Val	Ile	Van Damme et al., 2009
Actin, aortic smooth muscle	P62737	3-377	peptide-Asp246+Gly-peptide	P	MS	Glu	Leu	Pro	Asp	Gly	Gln	Val	Ile	Van Damme et al., 2009
actin, cytoplasmic 1	P60710	2-375	peptide-Asp11+Asn-peptide	P	MS	Leu	Val	Val	Asp	Asn	Gly	Ser	Gly	Van Damme et al., 2009
Actin, cytoplasmic 1	P60710	1-375	peptide-Asp222+Phe-peptide	P	MS	Val	Ala	Leu	Asp	Phe	Glu	Gln	Glu	Van Damme et al., 2009
Actin, cytoplasmic 1	P60710	1-375	peptide-Asp244+Gly-peptide	P	MS	Glu	Leu	Pro	Asp	Gly	Gln	Val	Ile	Van Damme et al., 2009
Actin, cytoplasmic 2	P63260	1-375	peptide-Asp11+Asn-peptide	P	MS	Leu	Val	Ile	Asp	Asn	Gly	Ser	Gly	Van Damme et al., 2009
Actin, cytoplasmic 2	P63260	1-375	peptide-Asp222+Phe-peptide	P	MS	Val	Ala	Leu	Asp	Phe	Glu	Gln	Glu	Van Damme et al., 2009
Actin, cytoplasmic 2	P63260	1-375	peptide-Asp244+Gly-peptide	P	MS	Glu	Leu	Pro	Asp	Gly	Gln	Val	Ile	Van Damme et al., 2009
Actin, gamma-enteric smooth muscle	P63268	3-376	peptide-Asp245+Gly-peptide	P	MS	Glu	Leu	Pro	Asp	Gly	Gln	Val	Ile	Van Damme et al., 2009
actin-like protein 6A	Q9Z2N8	1-429	peptide-Asp59+Lys-peptide	P	MS	Ile	Asp	Gly	Asp	Lys	Gly	Lys	Gln	Van Damme et al., 2009
actin-like protein 6A	O96019	1-429	peptide-Asp59+Lys-peptide	N	MS	Ile	Asp	Gly	Asp	Lys	Gly	Lys	Gln	Van Damme et al., 2009
activated RNA polymerase II transcriptional coactivator p15	P11031	2-127	peptide-Asp16+Ser-peptide	P	MS	Ser	Gly	Ser	Asp	Ser	Asp	Ser	Glu	Van Damme et al., 2009
Activated RNA polymerase II transcriptional coactivator p15	P11031	2-127	peptide-Asp18+Ser-peptide	P	MS	Ser	Asp	Ser	Asp	Ser	Glu	Val	Glu	Van Damme et al., 2009
Acyl-CoA synthetase family member 2, mitochondrial	Q96CM8	42-615	peptide-Arg508+Ser-peptide	P	MS	Ile	Val	Gly	Arg	Ser	Lys	Asp	Met	Van Damme et al., 2009
ADP-ribosylation factor-like protein 6-interacting protein 4	Q9JM93	1-229	peptide-Asp193+Gly-peptide	P	MS	Ile	Lys	Gly	Asp	Gly	Glu	Val	Leu	Van Damme et al., 2009
alpha-enolase	P17182	2-434	peptide-Asp23+Leu-peptide	P	MS	Val	Glu	Val	Asp	Leu	Tyr	Thr	Ala	Van Damme et al., 2009
Alpha-enolase	P06733	2-434	peptide-Asp23+Leu-peptide	P	MS	Val	Glu	Val	Asp	Leu	Phe	Thr	Ser	Van Damme et al., 2009
Ankyrin repeat and KH domain-containing protein 1	Q8IWZ3	1-2542	peptide-Asp4+Ser-peptide	P	MS	Met	Leu	Thr	Asp	Ser	Gly	Gly	Gly	Van Damme et al., 2009
asparaginyl bond			peptide-Asn+peptide	N		-	-	NPe	Asn	CPe	-	-	-	Froelich, 2004
aspartyl bond			peptide-Asp+peptide	N		-	-	NPe	Asp	CPe	-	-	-	Froelich, 2004
ATP synthase subunit alpha, mitochondrial	Q03265	44-553	peptide-Asp63+Thr-peptide	P	MS	Leu	Gly	Ala	Asp	Thr	Ser	Val	Asp	Van Damme et al., 2009
ATP synthase subunit alpha, mitochondrial	P25705	44-553	peptide-Asp63+Thr-peptide	P	MS	Leu	Gly	Ala	Asp	Thr	Ser	Val	Asp	Van Damme et al., 2009
ATP-binding cassette sub-family F member 1	Q6P542	1-837	peptide-Asp136+Asp-peptide	P	MS	Leu	Ile	Gln	Asp	Asp	Ser	Glu	Glu	Van Damme et al., 2009
ATP-binding cassette sub-family F member 1	Q6P542	1-837	peptide-Asp137+Ser-peptide	P	MS	Ile	Gln	Asp	Asp	Ser	Glu	Glu	Glu	Van Damme et al., 2009
ATP-binding cassette sub-family F member 2	Q99LE6	1-628	peptide-Asp55+Gly-peptide	P	MS	Thr	Thr	Gly	Asp	Gly	Glu	Val	Asp	Van Damme et al., 2009
ATP-binding cassette sub-family F member 2	Q99LE6	1-628	peptide-Asp59+Leu-peptide	P	MS	Gly	Glu	Val	Asp	Leu	Leu	Thr	Lys	Van Damme et al., 2009
ATP-binding cassette sub-family F member 2	Q9UG63	1-623	peptide-Asp54+Leu-peptide	P	MS	Thr	Glu	Val	Asp	Leu	Leu	Thr	Lys	Van Damme et al., 2009
ATP-dependent RNA helicase DDX50	Q99MJ9	1-734	peptide-Asp9+Ile-peptide	P	MS	Leu	Trp	Gly	Asp	Ile	Met	Glu	Leu	Van Damme et al., 2009
ATP-dependent RNA helicase DDX51	Q6P9R1	1-639	peptide-Glu13+Ala-peptide	P	MS	Ala	Gly	Pro	Glu	Ala	Ala	Gly	Gln	Van Damme et al., 2009
ATP-dependent RNA helicase DHX8	Q14562	1-1220	peptide-Asp144+Val-peptide	P	MS	Val	Ala	Val	Asp	Val	Leu	Lys	Glu	Van Damme et al., 2009
BCL2/adenovirus E1B 19 kDa protein-interacting protein 2	Q12982	1-314	peptide-Asp28+Ile-peptide	P	MS	Ile	Glu	Ala	Asp	Ile	Leu	Ala	Ile	Van Damme et al., 2009
Beta-actin-like protein 2	Q8BFZ3	1-376	peptide-Asp245+Gly-peptide	P	MS	Glu	Leu	Pro	Asp	Gly	Gln	Val	Ile	Van Damme et al., 2009
BH3-interacting domain death agonist	P55957	1-195	peptide-Asp75+Ser-peptide	P	MS	Ile	Glu	Ala	Asp	Ser	Glu	Ser	Gln	Van Damme et al., 2009
Bifunctional glutamate/proline--tRNA ligase	P07814	1-1512	peptide-Asn815+Ser-peptide	P	MS	Ile	Ser	Ser	Asn	Ser	Ser	Ala	Ser	Van Damme et al., 2009
blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0015P12 product:SWI/SNF related, matrix associated, act	Q3TKT4	1-1613	peptide-Asp694+Ser-peptide	P	MS	Pro	Asp	Pro	Asp	Ser	Asp	Asp	Val	Van Damme et al., 2009
Boc-Ala-Ala-Asp-SBzl			Boc-Ala-Ala-Asp+SBzl	S		Boc	Ala	Ala	Asp	SBz	-	-	-	Froelich, 2004
bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830028H02 product:splicing factor 3b, subunit 2, full in	Q3UAI4	1-878	peptide-Asp572+Leu-peptide	P	MS	Ile	His	Gly	Asp	Leu	Tyr	Tyr	Glu	Van Damme et al., 2009
Breakpoint cluster region protein	P11274	1-1271	peptide-Asp243+Gly-peptide	P	MS	Cys	Gly	Val	Asp	Gly	Asp	Tyr	Glu	Van Damme et al., 2009
Breakpoint cluster region protein	P11274	1-1271	peptide-Asp245+Tyr-peptide	P	MS	Val	Asp	Gly	Asp	Tyr	Glu	Asp	Ala	Van Damme et al., 2009
Bromodomain adjacent to zinc finger domain protein 1A	Q9NRL2	1-1556	peptide-Asp1346+Val-peptide	P	MS	Leu	Gln	Ala	Asp	Val	Phe	Val	Glu	Van Damme et al., 2009
brpf1 bromodomain and PHD finger containing, 1	Q3U109	1-1247	peptide-Asp102+Leu-peptide	N	CS	Val	Glu	Val	Asp	Leu	His	Gly	Arg	Loeb et al., 2006	25613
calreticulin	P14211	18-416	peptide-Asp63+Lys-peptide	N	CS	Leu	Glu	Lys	Asp	Lys	Gly	Leu	Gln	Bredemeyer etal, 2004	23297
caspase-3 precursor	P42574	29-277	peptide-Asp175+Ser-peptide	N		Ile	Glu	Thr	Asp	Ser	Gly	Val	Asp	Casciola-Rosen et al., 2007
caspase-3 precursor	P70677	29-277	peptide-Asp175+Ser-peptide	P		Ile	Glu	Thr	Asp	Ser	Gly	Thr	Asp	Casciola-Rosen et al., 2007
cell division cycle 5-like protein	Q99459	1-802	peptide-Asp145+Glu-peptide	N	MS	Ile	Asp	Met	Asp	Glu	Asp	Glu	Leu	Van Damme et al., 2009
cell division cycle 5-related protein	Q6A068	1-802	peptide-Asp145+Glu-peptide	P	MS	Ile	Asp	Met	Asp	Glu	Asp	Glu	Leu	Van Damme et al., 2009
Cell division cycle protein 27 homolog	P30260	1-824	peptide-Asp243+Thr-peptide	P	MS	Ile	Ser	Pro	Asp	Thr	Val	Pro	Leu	Van Damme et al., 2009
Cell division cycle-associated protein 2	Q69YH5	1-1023	peptide-Asp795+Val-peptide	P	MS	Cys	Leu	Gly	Asp	Val	Leu	Ile	Glu	Van Damme et al., 2009
cell growth-regulating nucleolar protein	Q08288	1-388	peptide-Asp266+Ala-peptide	P	MS	Pro	Gly	Glu	Asp	Ala	Ala	Glu	Gly	Van Damme et al., 2009
chromodomain-helicase-DNA-binding protein 4	Q6PDQ2	1-1915	peptide-Asp77+Ser-peptide	P	MS	Glu	Leu	Gly	Asp	Ser	Ser	Gly	Glu	Van Damme et al., 2009
Chromodomain-helicase-DNA-binding protein 4	Q14839	1-1912	peptide-Asp320+Phe-peptide	P	MS	Val	Glu	Ser	Asp	Phe	Asp	Asp	Ala	Van Damme et al., 2009
chromodomain-helicase-DNA-binding protein 7	A2AJK6	1-2986	peptide-Asp1425+Lys-peptide	P	MS	Leu	Gly	Leu	Asp	Lys	Ala	Val	Leu	Van Damme et al., 2009
Chromodomain-helicase-DNA-binding protein 7	Q9P2D1	1-2997	peptide-Asp1435+Lys-peptide	P	MS	Leu	Gly	Leu	Asp	Lys	Ala	Val	Leu	Van Damme et al., 2009
Chromodomain-helicase-DNA-binding protein 8	Q09XV5	1-2582	peptide-Asp1280+Lys-peptide	P	MS	Leu	Gly	Leu	Asp	Lys	Ala	Val	Leu	Van Damme et al., 2009
Chromodomain-helicase-DNA-binding protein 8	Q9HCK8	1-2581	peptide-Asp1278+Lys-peptide	P	MS	Leu	Gly	Leu	Asp	Lys	Ala	Val	Leu	Van Damme et al., 2009
Chromodomain-helicase-DNA-binding protein 9	Q3L8U1	1-2897	peptide-Asp1327+Lys-peptide	P	MS	Leu	Gly	Leu	Asp	Lys	Ala	Val	Leu	Van Damme et al., 2009
Chromodomain-helicase-DNA-binding protein 9	Q8BYH8	1-2885	peptide-Asp1326+Lys-peptide	P	MS	Leu	Gly	Leu	Asp	Lys	Ala	Val	Leu	Van Damme et al., 2009
chromosome-associated kinesin KIF4	P33174	1-1231	peptide-Asp810+Ser-peptide	P	MS	His	Gly	Gln	Asp	Ser	Gly	Ala	Glu	Van Damme et al., 2009
clathrin light chain B	Q6IRU5	1-229	peptide-Asp75+Val-peptide	P	MS	Val	Asn	Gly	Asp	Val	Phe	Gln	Glu	Van Damme et al., 2009
cleavage and polyadenylation specificity factor subunit 6	Q6NVF9	1-551	peptide-Asp63+Val-peptide	P	MS	Val	Gly	Asp	Asp	Val	Gly	Lys	Gly	Van Damme et al., 2009
CLIP-associating protein 1	Q80TV8	1-1535	peptide-Asp1166+Thr-peptide	P	MS	Leu	Asp	Tyr	Asp	Thr	Glu	Asn	Leu	Van Damme et al., 2009
Coiled-coil domain-containing protein 137	Q6PK04	1-289	peptide-Asp108+Ile-peptide	P	MS	Glu	Glu	Pro	Asp	Ile	Ala	Val	Pro	Van Damme et al., 2009
cytoskeleton associated protein 5	A2AGT5	1-2032	peptide-Asp1487+Leu-peptide	P	MS	Phe	Gln	Leu	Asp	Leu	Asp	Glu	Ile	Van Damme et al., 2009	25763
DBIRD complex subunit KIAA1967	Q8N163	1-923	peptide-Asp469+Ala-peptide	P	MS	Gln	Ala	Pro	Asp	Ala	Leu	Glu	Gln	Van Damme et al., 2009
death-inducer obliterator 1	Q8C9B9	1-2256	peptide-Asp807+Ser-peptide	P	MS	Pro	Val	Ser	Asp	Ser	Glu	Glu	Gln	Van Damme et al., 2009
DNA fragmentation factor subunit alpha	O00273	1-331	peptide-Asp6+Ala-peptide	P	MS	Val	Thr	Gly	Asp	Ala	Gly	Val	Pro	Van Damme et al., 2009
DNA mismatch repair protein Msh6	P54276	1-1358	peptide-Asp284+Ser-peptide	P	MS	Gly	Val	Gly	Asp	Ser	Asp	Ser	Glu	Van Damme et al., 2009
DNA mismatch repair protein Msh6	P52701	1-1360	peptide-Asp934+Ser-peptide	P	MS	Ala	Gly	Phe	Asp	Ser	Asp	Tyr	Asp	Van Damme et al., 2009
DNA mismatch repair protein Msh6	P54276	1-1358	peptide-Asp931+Ser-peptide	P	MS	Ala	Gly	Phe	Asp	Ser	Asp	Tyr	Asp	Van Damme et al., 2009
DNA replication licensing factor MCM2	P97310	1-904	peptide-Asp88+Val-peptide	P	MS	Pro	Glu	Leu	Asp	Val	Tyr	Glu	Ala	Van Damme et al., 2009
DNA replication licensing factor MCM2	P49736	2-904	peptide-Asp88+Ala-peptide	P	MS	Pro	Glu	Leu	Asp	Ala	Tyr	Glu	Ala	Van Damme et al., 2009
DNA replication licensing factor MCM3	P25206	2-812	peptide-Asp516+Ala-peptide	P	MS	Gln	Asp	Gly	Asp	Ala	Leu	Pro	Leu	Van Damme et al., 2009
DNA replication licensing factor MCM3	P25206	2-812	peptide-Asp525+Ile-peptide	P	MS	Ser	Ser	Val	Asp	Ile	Leu	Ala	Thr	Van Damme et al., 2009
DNA replication licensing factor MCM3	P25206	2-812	peptide-Asp737+Ser-peptide	P	MS	Glu	Thr	Gln	Asp	Ser	Gln	Lys	Val	Van Damme et al., 2009
DNA replication licensing factor MCM4	P33991	2-863	peptide-Asp85+Val-peptide	P	MS	Leu	Asp	Phe	Asp	Val	Ser	Ser	Pro	Van Damme et al., 2009
DNA replication licensing factor MCM5	P49718	1-733	peptide-Asp13+Ser-peptide	P	MS	Phe	Tyr	Ser	Asp	Ser	Phe	Gly	Gly	Van Damme et al., 2009
DNA replication licensing factor MCM5	P33992	1-734	peptide-Asp13+Ser-peptide	P	MS	Phe	Tyr	Ser	Asp	Ser	Phe	Gly	Gly	Van Damme et al., 2009
DnaJ homolog subfamily A member 2	Q9QYJ0	1-409	peptide-Glu367+Thr-peptide	P	MS	Val	Ile	Gly	Glu	Thr	Glu	Glu	Val	Van Damme et al., 2009
DNAJ homolog subfamily C member 9	Q91WN1	1-259	peptide-Asp214+Asn-peptide	P	MS	Glu	Gly	Val	Asp	Asn	Leu	Lys	Ala	Van Damme et al., 2009
double-strand break repair protein MRE11A	Q61216	1-706	peptide-Asp646+Asp-peptide	P	MS	Ile	Glu	Val	Asp	Asp	Ser	Asp	Glu	Van Damme et al., 2009
dual specificity mitogen-activated protein kinase kinase 6	P70236	1-334	peptide-Asp51+Asp-peptide	P	MS	Val	Lys	Ala	Asp	Asp	Leu	Glu	Pro	Van Damme et al., 2009
Dynactin subunit 2	Q13561	2-401	peptide-Asp161+Ala-peptide	P	MS	Leu	Gly	Pro	Asp	Ala	Ala	Ile	Asn	Van Damme et al., 2009
E3 SUMO-protein ligase RanBP2	Q9ERU9	1-3053	peptide-Asp2131+Glu-peptide	P	MS	Val	Gly	Thr	Asp	Glu	Glu	Ser	Asp	Van Damme et al., 2009
E3 ubiquitin-protein ligase HUWE1	Q7Z6Z7	1-4374	peptide-Asp2588+Ile-peptide	P	MS	Ala	Ala	Ala	Asp	Ile	Leu	Gln	Leu	Van Damme et al., 2009
E3 ubiquitin-protein ligase HUWE1	Q7Z6Z7	1-4374	peptide-Asp3773+Ala-peptide	P	MS	Ala	Glu	Ala	Asp	Ala	Ile	Ile	Gln	Van Damme et al., 2009
E3 ubiquitin-protein ligase UBR5	O95071	1-2799	peptide-Asp619+Ala-peptide	P	MS	Thr	Cys	Ser	Asp	Ala	Ser	Ser	Ile	Van Damme et al., 2009
Echinoderm microtubule-associated protein-like 4	Q3UMY5	1-988	peptide-Glu967+Leu-peptide	P	MS	Pro	Ala	Ser	Glu	Leu	Ser	Glu	Thr	Van Damme et al., 2009
elongation factor 1-alpha 1	P10126	1-462	peptide-Asp252+Val-peptide	P	MS	Pro	Leu	Gln	Asp	Val	Tyr	Lys	Ile	Van Damme et al., 2009
Elongation factor 1-alpha 1	P10126	1-462	peptide-Asp398+Ala-peptide	P	MS	Lys	Ser	Gly	Asp	Ala	Ala	Ile	Val	Van Damme et al., 2009
Elongation factor 1-alpha 1	P10126	1-462	peptide-Glu413+Ser-peptide	P	MS	Met	Cys	Val	Glu	Ser	Phe	Ser	Asp	Van Damme et al., 2009
Elongation factor 1-alpha 1	P68104	1-462	peptide-Asp252+Val-peptide	P	MS	Pro	Leu	Gln	Asp	Val	Tyr	Lys	Ile	Van Damme et al., 2009
Elongation factor 1-alpha 1	P68104	1-462	peptide-Asp398+Ala-peptide	P	MS	Lys	Ser	Gly	Asp	Ala	Ala	Ile	Val	Van Damme et al., 2009
Elongation factor 1-alpha 1	P68104	1-462	peptide-Glu413+Ser-peptide	P	MS	Met	Cys	Val	Glu	Ser	Phe	Ser	Asp	Van Damme et al., 2009
Elongation factor 1-alpha 2	P62631	1-463	peptide-Asp252+Val-peptide	P	MS	Pro	Leu	Gln	Asp	Val	Tyr	Lys	Ile	Van Damme et al., 2009
Elongation factor 1-alpha 2	Q05639	1-463	peptide-Asp252+Val-peptide	P	MS	Pro	Leu	Gln	Asp	Val	Tyr	Lys	Ile	Van Damme et al., 2009
endoplasmin	P08113	22-802	peptide-Asp28+Gly-peptide	P	MS	Val	Asp	Val	Asp	Gly	Thr	Val	Glu	Van Damme et al., 2009
Endoplasmin	P14625	22-803	peptide-Asp28+Gly-peptide	P	MS	Val	Asp	Val	Asp	Gly	Thr	Val	Glu	Van Damme et al., 2009
enhancer of mRNA-decapping protein 3	Q8K2D3	1-508	peptide-Asp214+Lys-peptide	P	MS	Ala	Leu	Phe	Asp	Lys	Ala	Ala	Val	Van Damme et al., 2009
Enhancer of mRNA-decapping protein 4	Q6P2E9	1-1401	peptide-Asp57+Ser-peptide	P	MS	Cys	Ser	Gly	Asp	Ser	Thr	Ser	Ala	Van Damme et al., 2009
eukaryotic translation initiation factor 2 subunit 2	P20042	1-333	peptide-Asp51+Lys-peptide	N	MS	Pro	Thr	Glu	Asp	Lys	Asp	Leu	Glu	Van Damme et al., 2009
eukaryotic translation initiation factor 3 subunit J	Q66JS6	2-263	peptide-Asp22+Thr-peptide	P	MS	Trp	Asp	Ala	Asp	Thr	Phe	Ser	Met	Van Damme et al., 2009
Eukaryotic translation initiation factor 3 subunit J	O75822	2-258	peptide-Asp17+Ala-peptide	P	MS	Trp	Asp	Ala	Asp	Ala	Phe	Ser	Val	Van Damme et al., 2009
Eukaryotic translation initiation factor 3 subunit J-A	Q3UGC7	2-261	peptide-Asp20+Thr-peptide	P	MS	Trp	Asp	Ala	Asp	Thr	Phe	Ser	Met	Van Damme et al., 2009
Eukaryotic translation initiation factor 4 gamma 1	Q04637	1-1599	peptide-Asp665+Phe-peptide	P	MS	Cys	Gly	Pro	Asp	Phe	Thr	Pro	Ser	Van Damme et al., 2009
eukaryotic translation initiation factor 4 gamma 2	Q62448	1-906	peptide-Asp329+Ala-peptide	P	MS	Ile	Arg	Gln	Asp	Ala	Val	Lys	Asp	Van Damme et al., 2009
eukaryotic translation initiation factor 4H	Q9WUK2	2-248	peptide-Asp57+Ile-peptide	P	MS	Val	Gln	Gly	Asp	Ile	Asp	Ala	Ile	Van Damme et al., 2009
eukaryotic translation initiation factor 5A-1	P63242	2-154	peptide-Asp11+Ala-peptide	P	MS	Glu	Thr	Gly	Asp	Ala	Gly	Ala	Ser	Van Damme et al., 2009
Eukaryotic translation initiation factor 5A-1	P63242	2-154	peptide-Glu8+Thr-peptide	P	MS	Leu	Asp	Phe	Glu	Thr	Gly	Asp	Ala	Van Damme et al., 2009
Extended synaptotagmin-2	A0FGR8	1-921	peptide-Asp759+Ile-peptide	P	MS	Ile	Ala	Ser	Asp	Ile	Ser	Leu	Pro	Van Damme et al., 2009
far upstream element-binding protein 2	Q3U0V1	1-748	peptide-Asp92+Ala-peptide	P	MS	Ile	Gly	Gly	Asp	Ala	Ala	Thr	Thr	Van Damme et al., 2009
Far upstream element-binding protein 2	Q92945	1-711	peptide-Asp91+Ala-peptide	P	MS	Ile	Gly	Gly	Asp	Ala	Ala	Thr	Thr	Van Damme et al., 2009
Fgfr1 fibroblast growth factor receptor 1 isoform 1	P16092	22-822	peptide-Asp432+Ser-peptide	N	CS	Val	Ser	Ala	Asp	Ser	Ser	Ala	Ser	Loeb et al., 2006	25601
FK506-binding protein 5	Q64378	1-456	peptide-Asp347+Ser-peptide	P	MS	Leu	Gly	Leu	Asp	Ser	Ala	Asn	Glu	Van Damme et al., 2009
Forkhead box protein K1	P85037	1-733	peptide-Asp80+Ser-peptide	P	MS	Val	Ser	Gly	Asp	Ser	Ala	Val	Ala	Van Damme et al., 2009
fragile X mental retardation syndrome-related protein 2	Q9WVR4	1-673	peptide-Asp524+Thr-peptide	P	MS	Ser	Leu	Leu	Asp	Thr	Ser	Glu	Pro	Van Damme et al., 2009
Gametocyte-specific factor 1	Q8WW33	1-167	peptide-Asp80+Val-peptide	P	MS	Ile	Glu	Gln	Asp	Val	Val	Asn	Gln	Van Damme et al., 2009
Gamma-enolase	P17183	1-434	peptide-Asp23+Leu-peptide	P	MS	Val	Glu	Val	Asp	Leu	Tyr	Thr	Ala	Van Damme et al., 2009
gamma-parvin	Q9ERD8	1-331	peptide-Asp8+Leu-peptide	P	MS	Phe	Leu	Tyr	Asp	Leu	Leu	Gln	Leu	Van Damme et al., 2009	25798
gamma-taxilin	Q8BHN1	1-524	peptide-Asp83+Glu-peptide	P	MS	Leu	Glu	Gly	Asp	Glu	Gly	Ser	Asp	Van Damme et al., 2009
general transcription factor 3C polypeptide 1	Q8K284	1-2101	peptide-Asp577+Ile-peptide	P	MS	His	Ser	Gly	Asp	Ile	Ala	Val	Ile	Van Damme et al., 2009
General transcription factor 3C polypeptide 1	Q8K284	1-2101	peptide-Asp1603+Gly-peptide	P	MS	Leu	Gly	Lys	Asp	Gly	Gly	Leu	Asp	Van Damme et al., 2009
glucosidase 2 subunit beta	O08795	15-521	peptide-Asp260+Thr-peptide	P	MS	Leu	Ser	Gly	Asp	Thr	Gln	Thr	Asp	Van Damme et al., 2009
Glucosidase 2 subunit beta	P14314	15-528	peptide-Asp260+Thr-peptide	P	MS	Leu	Ser	Gly	Asp	Thr	Gln	Thr	Asp	Van Damme et al., 2009
Glutathione S-transferase P	P09211	2-210	peptide-Ala87+Ala-peptide	P	MS	Gln	Gln	Glu	Ala	Ala	Leu	Val	Asp	Van Damme et al., 2009
Guanine nucleotide-binding protein-like 3	Q9BVP2	1-549	peptide-Ser141+Asp-peptide	P	MS	Ile	Glu	Ala	Ser	Asp	Val	Val	Leu	Van Damme et al., 2009
H/ACA ribonucleoprotein complex subunit 2	Q9CRB2	1-153	peptide-Glu9+Glu-peptide	P	MS	Ala	Ala	Pro	Glu	Glu	Ser	Glu	Ala	Van Damme et al., 2009
H/ACA ribonucleoprotein complex subunit 4	Q9ESX5	2-509	peptide-Glu430+Ala-peptide	P	MS	Leu	Val	Thr	Glu	Ala	Val	Gln	Ala	Van Damme et al., 2009
hematopoietic lineage cell-specific protein	P49710	1-486	peptide-Asp387+Tyr-peptide	P	MS	Thr	Glu	Pro	Asp	Tyr	Glu	Asp	Val	Van Damme et al., 2009
hepatoma-derived growth factor-related protein 2	Q3UIH6	1-669	peptide-Asp109+Leu-peptide	P	MS	Pro	Glu	Ala	Asp	Leu	Gly	Cys	Gly	Van Damme et al., 2009
Hepatoma-derived growth factor-related protein 2	Q3UMU9	1-669	peptide-Asp109+Leu-peptide	P	MS	Pro	Glu	Ala	Asp	Leu	Gly	Cys	Gly	Van Damme et al., 2009
Heterogeneous nuclear ribonucleoprotein A1	P09651	2-372	peptide-Tyr318+Asn-peptide	P	MS	Phe	Gly	Asn	Tyr	Asn	Asn	Gln	Ser	Van Damme et al., 2009
Heterogeneous nuclear ribonucleoprotein A1-like 2	Q32P51	1-320	peptide-Tyr266+Asn-peptide	P	MS	Phe	Gly	Asn	Tyr	Asn	Asn	Gln	Ser	Van Damme et al., 2009
heterogeneous nuclear ribonucleoprotein F	Q9Z2X1	2-415	peptide-Asp251+Gly-peptide	P	MS	Gly	Leu	Ser	Asp	Gly	Tyr	Gly	Phe	Van Damme et al., 2009
Heterogeneous nuclear ribonucleoprotein H2	P70333	1-449	peptide-Asp94+Trp-peptide	N	CS	Val	Glu	Met	Asp	Trp	Val	Leu	Lys	Loeb et al., 2006	25610
Heterogeneous nuclear ribonucleoprotein H2	P70333	1-449	peptide-Asp324+Gly-peptide	N	CS	Ile	Gly	Pro	Asp	Gly	Arg	Val	Thr	Loeb et al., 2006	25611
Heterogeneous nuclear ribonucleoprotein K	P61978	1-463	peptide-Asp382+Leu-peptide	P	MS	Ser	Tyr	Gly	Asp	Leu	Gly	Gly	Pro	Van Damme et al., 2009
Heterogeneous nuclear ribonucleoprotein U	Q00839	2-825	peptide-Asp232+Gly-peptide	P	MS	Ala	Ala	Gly	Asp	Gly	Lys	Thr	Glu	Van Damme et al., 2009
Heterogeneous nuclear ribonucleoprotein U	Q8VEK3	2-800	peptide-Asp524+Thr-peptide	P	MS	Gln	Met	Ala	Asp	Thr	Gly	Lys	Leu	Van Damme et al., 2009
heterogenous nuclear ribonucleoprotein U	O88568	1-798	peptide-Asp522+Thr-peptide	P	MS	Gln	Met	Ala	Asp	Thr	Gly	Lys	Leu	Van Damme et al., 2009
histone deacetylase 2	P70288	1-488	peptide-Asp393+Ser-peptide	P	MS	Val	His	Glu	Asp	Ser	Gly	Asp	Glu	Van Damme et al., 2009
Histone H2A.V	Q71UI9	1-128	peptide-Asp9+Ser-peptide	P	MS	Ala	Gly	Lys	Asp	Ser	Gly	Lys	Ala	Van Damme et al., 2009
histone H2A.Z	P0C0S6	2-128	peptide-Asp9+Ser-peptide	P	MS	Ala	Gly	Lys	Asp	Ser	Gly	Lys	Ala	Van Damme et al., 2009
Histone H2A.Z	P0C0S5	2-128	peptide-Asp9+Ser-peptide	P	MS	Ala	Gly	Lys	Asp	Ser	Gly	Lys	Ala	Van Damme et al., 2009
Histone H2B type 1-B	P33778	2-126	peptide-Asp52+Thr-peptide	P	MS	Val	His	Pro	Asp	Thr	Gly	Ile	Ser	Van Damme et al., 2009
Histone H2B type 1-C/E/F/G/I	P62807	2-126	peptide-Asp52+Thr-peptide	P	MS	Val	His	Pro	Asp	Thr	Gly	Ile	Ser	Van Damme et al., 2009
Histone H2B type 1-D	P58876	2-126	peptide-Asp52+Thr-peptide	P	MS	Val	His	Pro	Asp	Thr	Gly	Ile	Ser	Van Damme et al., 2009
Histone H2B type 1-H	Q93079	2-126	peptide-Asp52+Thr-peptide	P	MS	Val	His	Pro	Asp	Thr	Gly	Ile	Ser	Van Damme et al., 2009
Histone H2B type 1-J	P06899	2-126	peptide-Asp52+Thr-peptide	P	MS	Val	His	Pro	Asp	Thr	Gly	Ile	Ser	Van Damme et al., 2009
Histone H2B type 1-K	O60814	2-126	peptide-Asp52+Thr-peptide	P	MS	Val	His	Pro	Asp	Thr	Gly	Ile	Ser	Van Damme et al., 2009
Histone H2B type 1-L	Q99880	2-126	peptide-Asp52+Thr-peptide	P	MS	Val	His	Pro	Asp	Thr	Gly	Ile	Ser	Van Damme et al., 2009
Histone H2B type 1-M	Q99879	2-126	peptide-Asp52+Thr-peptide	P	MS	Val	His	Pro	Asp	Thr	Gly	Ile	Ser	Van Damme et al., 2009
Histone H2B type 1-N	Q99877	2-126	peptide-Asp52+Thr-peptide	P	MS	Val	His	Pro	Asp	Thr	Gly	Ile	Ser	Van Damme et al., 2009
Histone H2B type 1-O	P23527	2-126	peptide-Asp52+Thr-peptide	P	MS	Val	His	Pro	Asp	Thr	Gly	Ile	Ser	Van Damme et al., 2009
Histone H2B type 2-E	Q16778	2-126	peptide-Asp52+Thr-peptide	P	MS	Val	His	Pro	Asp	Thr	Gly	Ile	Ser	Van Damme et al., 2009
Histone H2B type 2-F	Q5QNW6	2-126	peptide-Asp52+Thr-peptide	P	MS	Val	His	Pro	Asp	Thr	Gly	Ile	Ser	Van Damme et al., 2009
Histone H2B type 3-B	Q8N257	2-126	peptide-Asp52+Thr-peptide	P	MS	Val	His	Pro	Asp	Thr	Gly	Ile	Ser	Van Damme et al., 2009
Histone H2B type F-S	P57053	2-126	peptide-Asp52+Thr-peptide	P	MS	Val	His	Pro	Asp	Thr	Gly	Ile	Ser	Van Damme et al., 2009
Histone-lysine N-methyltransferase MLL2	O14686	1-5537	peptide-Asp1673+Val-peptide	P	MS	Val	Ser	Pro	Asp	Val	Glu	Pro	Gly	Van Damme et al., 2009
Histone-lysine N-methyltransferase SETD1A	O15047	1-1707	peptide-Asp1252+Leu-peptide	P	MS	Thr	Glu	Val	Asp	Leu	Ala	Val	Leu	Van Damme et al., 2009
hsc70-interacting protein	Q99L47	1-371	peptide-Asp91+Thr-peptide	P		Ile	Glu	Pro	Asp	Thr	Asp	Ala	Pro	Caruso & Reiners, 2006
hspa1b heat shock 70kDa protein 1B	P17879	1-642	peptide-Asp366+Glu-peptide	N	CS	Ile	Asn	Pro	Asp	Glu	Ala	Val	Ala	Loeb et al., 2006	25609
importin subunit alpha-4	O35343	1-521	peptide-Asp59+Ser-peptide	P	MS	Ile	Cys	Glu	Asp	Ser	Asp	Ile	Asp	Van Damme et al., 2009
initiation factor eIF-4G	Q6NZJ6	1-1600	peptide-Asp669+Phe-peptide	P	MS	Cys	Gly	Pro	Asp	Phe	Thr	Pro	Ser	Van Damme et al., 2009
Interleukin enhancer-binding factor 3	Q12906	1-894	peptide-Asp597+Ala-peptide	P	MS	Leu	Ala	Leu	Asp	Ala	Asn	Lys	Lys	Van Damme et al., 2009
Itsn1 intersectin 1 isoform 1	Q9Z0R4	1-1714	peptide-Asp271+Gly-peptide	N	CS	Ile	Asp	Gln	Asp	Gly	Lys	Leu	Thr	Loeb et al., 2006	25614
Keratin, type I cytoskeletal 18	P05783	2-430	peptide-Asp394+Ala-peptide	P	MS	Asn	Leu	Gly	Asp	Ala	Leu	Asp	Ser	Van Damme et al., 2009
Keratin, type I cytoskeletal 19	P08727	1-400	peptide-Asp238+Ser-peptide	P	MS	Val	Glu	Val	Asp	Ser	Ala	Pro	Gly	Van Damme et al., 2009
Kinesin-like protein KIF21A	Q7Z4S6	1-1674	peptide-Asp531+Lys-peptide	P	MS	Leu	Ser	Ser	Asp	Lys	Glu	Thr	Ile	Van Damme et al., 2009
Kinesin-like protein KIF3B	O15066	1-747	peptide-Lys420+Leu-peptide	P	MS	Gln	Gln	Glu	Lys	Leu	Glu	Ile	Glu	Van Damme et al., 2009
la-related protein 1	Q6ZQ58	2-1072	peptide-Asp31+Ala-peptide	P	MS	Pro	Ala	Pro	Asp	Ala	Gln	Ala	Glu	Van Damme et al., 2009
La-related protein 1	Q6PKG0	2-1096	peptide-Asp606+Phe-peptide	P	MS	Glu	Glu	Leu	Asp	Phe	Leu	Phe	Asp	Van Damme et al., 2009
La-related protein 1	Q6ZQ58	2-1072	peptide-Asp583+Phe-peptide	P	MS	Glu	Glu	Leu	Asp	Phe	Leu	Phe	Asp	Van Damme et al., 2009
leucine-rich repeat flightless-interacting protein 1	Q3UZ39	1-729	peptide-Asp584+Val-peptide	P	MS	Gln	Asp	Pro	Asp	Val	Gly	Asp	Met	Van Damme et al., 2009
Leucine-rich repeat flightless-interacting protein 1	Q32MZ4	2-808	peptide-Asp673+Gly-peptide	P	MS	Val	Leu	Ala	Asp	Gly	Asp	Thr	Leu	Van Damme et al., 2009
Leucine-rich repeat flightless-interacting protein 1	Q32MZ4	2-808	peptide-Asp675+Thr-peptide	P	MS	Ala	Asp	Gly	Asp	Thr	Leu	Asp	Phe	Van Damme et al., 2009
Leucine-rich repeat flightless-interacting protein 1	Q32MZ4	2-808	peptide-Asp737+Ile-peptide	P	MS	Pro	Ser	Gln	Asp	Ile	Ser	Asp	Ala	Van Damme et al., 2009
Leucine-rich repeat-containing protein 16C	Q3V3V9	1-1296	peptide-Asp1218+Ile-peptide	P	MS	Pro	Ala	Pro	Asp	Ile	Leu	Ser	Leu	Van Damme et al., 2009
leupaxin	Q99N69	1-386	peptide-Asp5+Ala-peptide	P	MS	Glu	Glu	Leu	Asp	Ala	Leu	Leu	Glu	Van Damme et al., 2009
Lysine--tRNA ligase	Q15046	2-597	peptide-Glu67+Glu-peptide	P	MS	Val	Gly	Pro	Glu	Glu	Glu	Ser	Val	Van Damme et al., 2009
Lysine-specific demethylase 3B	Q7LBC6	1-1761	peptide-Asp697+Ser-peptide	P	MS	Ile	Thr	Thr	Asp	Ser	Ser	Lys	Leu	Van Damme et al., 2009
Lysine-specific demethylase PHF2	O75151	1-1096	peptide-Ser60+Thr-peptide	P	MS	His	Gly	Lys	Ser	Thr	Leu	Lys	Lys	Van Damme et al., 2009
Lysine-specific demethylase PHF2	Q9WTU0	1-1096	peptide-Ser60+Thr-peptide	P	MS	His	Gly	Lys	Ser	Thr	Leu	Lys	Lys	Van Damme et al., 2009
M-phase phosphoprotein 6	Q9D1Q1	1-161	peptide-Asp109+Val-peptide	P	MS	Val	Glu	Val	Asp	Val	Ser	Asp	Glu	Van Damme et al., 2009
Mediator of DNA damage checkpoint protein 1	Q14676	1-2089	peptide-Asp651+Thr-peptide	P	MS	Leu	Val	Val	Asp	Thr	Asp	Thr	Leu	Van Damme et al., 2009
Methionine--tRNA ligase, cytoplasmic	P56192	1-900	peptide-Asp368+Ile-peptide	P	MS	Ile	Thr	Gln	Asp	Ile	Phe	Gln	Gln	Van Damme et al., 2009
methionyl bond			peptide-Met+peptide	N		-	-	NPe	Met	CPe	-	-	-	Froelich, 2004
methyltransferase-like protein 13	Q8N6R0	1-699	peptide-Asp120+Lys-peptide	N	MS	Val	Val	Leu	Asp	Lys	Gly	Thr	Leu	Van Damme et al., 2009
microtubule-associated protein 4	P27546	1-1125	peptide-Asp878+Lys-peptide	P	MS	Leu	Ser	Val	Asp	Lys	Lys	Pro	Thr	Van Damme et al., 2009
Microtubule-associated protein 4	P27816	2-1152	peptide-Asp8+Ala-peptide	P	MS	Ser	Leu	Ala	Asp	Ala	Leu	Thr	Glu	Van Damme et al., 2009
Microtubule-associated protein 4	P27816	2-1152	peptide-Met300+Ala-peptide	P	MS	Glu	Ser	Asp	Met	Ala	Leu	Val	Lys	Van Damme et al., 2009
MKI67 FHA domain-interacting nucleolar phosphoprotein	Q91VE6	2-317	peptide-Asp19+Ser-peptide	P	MS	Pro	Gln	Glu	Asp	Ser	Gln	Phe	Glu	Van Damme et al., 2009
MKI67 FHA domain-interacting nucleolar phosphoprotein	Q91VE6	2-317	peptide-Asp213+Gln-peptide	P	MS	Val	Leu	Pro	Asp	Gln	Lys	Glu	Gly	Van Damme et al., 2009
MKIAA0224 protein	Q6A0A1	1-1224	peptide-Asp55+Leu-peptide	P	MS	Leu	Gly	Leu	Asp	Leu	Leu	Ala	Ser	Van Damme et al., 2009
Multidrug resistance-associated protein 9	Q96J65	1-1359	peptide-Asn303+Glu-peptide	P	MS	Gln	Thr	Met	Asn	Glu	Phe	Leu	Thr	Van Damme et al., 2009
myb-binding protein 1A	Q7TPV4	1-1344	peptide-Asp789+Gln-peptide	P	MS	Met	Ala	Leu	Asp	Gln	Asn	Leu	Ala	Van Damme et al., 2009
Myosin-10	P35580	1-1976	peptide-Asn1108+Ala-peptide	P	MS	His	Lys	Asn	Asn	Ala	Leu	Lys	Val	Van Damme et al., 2009
myotubularin-related protein 5	Q6ZPE2	1-1867	peptide-Asp99+Asn-peptide	P	MS	Val	Cys	Thr	Asp	Asn	Ala	Thr	Glu	Van Damme et al., 2009
Nascent polypeptide-associated complex subunit alpha	Q60817	1-215	peptide-Glu58+Ile-peptide	P	MS	Ala	Ala	Ala	Glu	Ile	Asp	Glu	Glu	Van Damme et al., 2009
Nascent polypeptide-associated complex subunit alpha, muscle-specific form	P70670	1-2187	peptide-Glu2030+Ile-peptide	P	MS	Ala	Ala	Ala	Glu	Ile	Asp	Glu	Glu	Van Damme et al., 2009
neurogenic locus notch homolog protein 1	Q01705	19-2531	peptide-Asp1860+Cys-peptide	N	CS	Val	Asp	Ala	Asp	Cys	Met	Asp	Val	Loeb et al., 2006	25604
neurogenic locus notch homolog protein 1	Q01705	19-2531	peptide-Asp1823+Leu-peptide	N	CS	Val	Leu	Pro	Asp	Leu	Ser	Asp	Gln	Loeb et al., 2006	25605
neurogenic locus notch homolog protein 1	Q01705	19-2531	peptide-Asp1902+Phe-peptide	N	CS	Val	Ile	Ser	Asp	Phe	Ile	Tyr	Gln	Loeb et al., 2006	25606
neurogenic locus notch homolog protein 1	Q01705	19-2531	peptide-Asp1962+Ala-peptide	N	CS	Val	Ser	Ala	Asp	Ala	Gln	Gly	Val	Loeb et al., 2006	25607
neurogenic locus notch homolog protein 1	Q01705	19-2531	peptide-Asp2072+His-peptide	N	CS	Val	Leu	Leu	Asp	His	Phe	Ala	Asn	Loeb et al., 2006	25608
NFATC2-interacting protein	O09130	1-412	peptide-Asp50+Ser-peptide	P	MS	Leu	Val	Ser	Asp	Ser	Asp	Glu	Glu	Van Damme et al., 2009
NFATC2-interacting protein	O09130	1-412	peptide-Asp78+Ser-peptide	P	MS	Pro	Glu	Gln	Asp	Ser	Asp	Ser	Asp	Van Damme et al., 2009
nipped-B-like protein	Q6KCD5	1-2798	peptide-Asp1085+Glu-peptide	P	MS	Ile	Ser	Ser	Asp	Glu	Asp	Asn	Asp	Van Damme et al., 2009
non-histone chromosomal protein HMG-14	P18608	2-96	peptide-Asp9+Gly-peptide	P	MS	Val	Ser	Ala	Asp	Gly	Ala	Ala	Lys	Van Damme et al., 2009
Nuclear autoantigenic sperm protein	P49321	1-788	peptide-Asp520+Met-peptide	P	MS	Leu	Ala	Trp	Asp	Met	Leu	Asp	Leu	Van Damme et al., 2009
Nuclear pore complex protein Nup214	P35658	1-2090	peptide-Thr987+Ser-peptide	P	MS	Val	Ser	Ser	Thr	Ser	Ser	Val	Ser	Van Damme et al., 2009
nuclease-sensitive element-binding protein 1	P62960	2-322	peptide-Asp256+Gly-peptide	P	MS	Pro	Arg	Glu	Asp	Gly	Asn	Glu	Glu	Van Damme et al., 2009
Nuclease-sensitive element-binding protein 1	P62960	2-322	peptide-Glu214+Val-peptide	P	MS	Val	Gln	Gly	Glu	Val	Met	Glu	Gly	Van Damme et al., 2009
nucleolar complex protein 2 homolog	Q9WV70	1-747	peptide-Asp128+Gly-peptide	P	MS	Thr	Glu	Glu	Asp	Gly	Gly	Glu	Asp	Van Damme et al., 2009
Nucleolar complex protein 2 homolog	Q9WV70	1-747	peptide-Asp672+Ser-peptide	P	MS	Phe	Glu	Leu	Asp	Ser	Ser	Glu	Gly	Van Damme et al., 2009
nucleolar GTP-binding protein 1	Q99ME9	2-634	peptide-Asp469+Ser-peptide	P	MS	Tyr	Asp	Ser	Asp	Ser	Glu	Ser	Glu	Van Damme et al., 2009
Nucleolar protein 56	O00567	1-594	peptide-Thr525+Ala-peptide	P	MS	Leu	Glu	Glu	Thr	Ala	Gly	Ser	Thr	Van Damme et al., 2009
Nucleolar protein 56	Q9D6Z1	1-580	peptide-Asp255+Ile-peptide	P	MS	Met	Gly	Met	Asp	Ile	Ser	Ala	Ile	Van Damme et al., 2009
Nucleolar protein 58	Q9Y2X3	1-529	peptide-Asp433+Ser-peptide	P	MS	Pro	Ser	Gly	Asp	Ser	Thr	Leu	Pro	Van Damme et al., 2009
nucleolar protein 5A	Q9D6Z1	1-580	peptide-Asp237+Gly-peptide	P	MS	Ile	Thr	Met	Asp	Gly	Ala	Lys	Ala	Van Damme et al., 2009
Nucleolar RNA helicase 2	Q9JIK5	1-851	peptide-Asp213+Ala-peptide	P	MS	Ala	Ser	Gly	Asp	Ala	Gly	Glu	Lys	Van Damme et al., 2009
Nucleolar RNA helicase 2	Q9NR30	1-783	peptide-Asp8+Ala-peptide	P	MS	Leu	Arg	Ser	Asp	Ala	Gly	Leu	Glu	Van Damme et al., 2009
nucleolin	P09405	2-707	peptide-Asp261+Asp-peptide	P	MS	Glu	Glu	Glu	Asp	Asp	Glu	Asp	Asp	Van Damme et al., 2009
Nucleolin	P09405	2-707	peptide-Asp409+Glu-peptide	P	MS	Ile	Thr	Glu	Asp	Glu	Leu	Lys	Glu	Van Damme et al., 2009
Nucleolin	P09405	2-707	peptide-Asp443+Ala-peptide	P	MS	Ser	Glu	Ala	Asp	Ala	Glu	Lys	Asn	Van Damme et al., 2009
Nucleolin	P09405	2-707	peptide-Asp579+Thr-peptide	P	MS	Leu	Ser	Glu	Asp	Thr	Thr	Glu	Glu	Van Damme et al., 2009
Nucleolin	P19338	2-710	peptide-Asp407+Glu-peptide	P	MS	Val	Thr	Gln	Asp	Glu	Leu	Lys	Glu	Van Damme et al., 2009
Nucleolin	P19338	2-710	peptide-Asp441+Ala-peptide	P	MS	Thr	Glu	Ala	Asp	Ala	Glu	Lys	Thr	Van Damme et al., 2009
Nucleosome assembly protein 1-like 1	P55209	1-388	peptide-Asp15+Leu-peptide	P	MS	Leu	Asp	Gln	Asp	Leu	Asp	Asp	Val	Van Damme et al., 2009
Nucleus accumbens-associated protein 1	Q96RE7	1-527	peptide-Asp339+Leu-peptide	P	MS	Val	Arg	Gln	Asp	Leu	Ala	Ser	Leu	Van Damme et al., 2009
opioid growth factor receptor	Q99PG2	1-633	peptide-Asp329+Ser-peptide	P	MS	Leu	Ser	Gly	Asp	Ser	Gly	Thr	Ala	Van Damme et al., 2009
Opsin-3	Q9H1Y3	1-402	peptide-Ala341+Gly-peptide	P	MS	Leu	Pro	Ala	Ala	Gly	Ser	Glu	Met	Van Damme et al., 2009
otubain-1	Q7TQI3	1-271	peptide-Asp27+Glu-peptide	P	MS	Leu	Ala	Tyr	Asp	Glu	Ala	Ile	Met	Van Damme et al., 2009
Oxysterol-binding protein-related protein 3	Q9H4L5	1-887	peptide-Asp485+Asn-peptide	P	MS	Leu	Ser	Leu	Asp	Asn	Leu	Ser	Asn	Van Damme et al., 2009
pabpc1 poly(A) binding protein, cytoplasmic 1	P29341	1-636	peptide-Asp589+Asn-peptide	N	CS	Leu	Glu	Ile	Asp	Asn	Ser	Glu	Leu	Loeb et al., 2006	25612
pallidin	Q9R0C0	1-172	peptide-Asp35+Glu-peptide	P	MS	Thr	Ser	Pro	Asp	Glu	Gly	Leu	Ile	Van Damme et al., 2009
Parafibromin	Q6P1J9	2-531	peptide-Asp200+Leu-peptide	P	MS	Ile	Lys	Thr	Asp	Leu	Asp	Asp	Asp	Van Damme et al., 2009
peptidyl-prolyl cis-trans isomerase G	Q13427	1-754	peptide-Asp384+Lys-peptide	N	MS	Ile	Lys	Gly	Asp	Lys	Ser	Glu	Leu	Van Damme et al., 2009
Pericentriolar material 1 protein	Q9R0L6	1-2025	peptide-Asp1767+Val-peptide	P	MS	Val	Arg	Ser	Asp	Val	Ser	Asp	Gln	Van Damme et al., 2009
Phosphorylated adapter RNA export protein	Q9JJT9	2-385	peptide-Glu123+Leu-peptide	P	MS	Val	Ala	Thr	Glu	Leu	Gly	Ile	Leu	Van Damme et al., 2009
pinin	O35691	2-725	peptide-Asp347+Ala-peptide	P	MS	Val	His	Ser	Asp	Ala	Glu	Lys	Glu	Van Damme et al., 2009
Plakophilin-3	Q9Y446	1-797	peptide-Pro23+Ser-peptide	P	MS	Leu	Ala	Leu	Pro	Ser	Asp	Leu	Gln	Van Damme et al., 2009
plasminogen activator inhibitor 1 RNA-binding protein	Q9CY58	1-407	peptide-Asp120+Gly-peptide	P	MS	Leu	Gln	Gly	Asp	Gly	Lys	Leu	Ile	Van Damme et al., 2009
polypyrimidine tract-binding protein 1	P17225	1-527	peptide-Asp7+Ile-peptide	P	MS	Ile	Val	Pro	Asp	Ile	Ala	Val	Gly	Van Damme et al., 2009
Polypyrimidine tract-binding protein 1	P17225	1-527	peptide-Asp171+Ala-peptide	P	MS	Ala	Ala	Val	Asp	Ala	Gly	Met	Ala	Van Damme et al., 2009
Polypyrimidine tract-binding protein 1	P26599	1-531	peptide-Asp7+Ile-peptide	P	MS	Ile	Val	Pro	Asp	Ile	Ala	Val	Gly	Van Damme et al., 2009
Polypyrimidine tract-binding protein 1	P26599	1-531	peptide-Asp172+Ala-peptide	P	MS	Ala	Ala	Val	Asp	Ala	Gly	Met	Ala	Van Damme et al., 2009
prcc protein	Q05CA9	1-485	peptide-Asp385+Ala-peptide	P	MS	Ile	Ala	Pro	Asp	Ala	Ser	Phe	Ile	Van Damme et al., 2009
Pre-mRNA-processing factor 40 homolog A	O75400	1-957	peptide-Asn722+Ser-peptide	P	MS	Leu	Ala	Phe	Asn	Ser	Leu	Leu	Glu	Van Damme et al., 2009
Pre-mRNA-processing factor 40 homolog B	Q6NWY9	1-871	peptide-Asn605+Ser-peptide	P	MS	Leu	Thr	Phe	Asn	Ser	Leu	Leu	Glu	Van Damme et al., 2009
Pre-mRNA-processing-splicing factor 8	Q6P2Q9	2-2335	peptide-Asp23+Tyr-peptide	P	MS	Pro	Leu	Pro	Asp	Tyr	Met	Ser	Glu	Van Damme et al., 2009
pre-mRNA-splicing factor 38A	Q4FK66	1-312	peptide-Asp187+Met-peptide	P	MS	Leu	Glu	Glu	Asp	Met	Asp	Asp	Val	Van Damme et al., 2009
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16	Q92620	2-1227	peptide-Asp52+Leu-peptide	P	MS	Leu	Gly	Leu	Asp	Leu	Leu	Ala	Ser	Van Damme et al., 2009
Probable ATP-dependent RNA helicase DDX27	Q96GQ7	1-796	peptide-Asp187+Thr-peptide	P	MS	Thr	Lys	Ala	Asp	Thr	Leu	Lys	Val	Van Damme et al., 2009
probable histone-lysine N-methyltransferase NSD2	Q8BVE8	1-1365	peptide-Asp375+Ser-peptide	P	MS	Glu	Met	Val	Asp	Ser	Ser	Gly	Ala	Van Damme et al., 2009
probable ribosome biogenesis protein RLP24	Q99L28	1-163	peptide-Asp66+Asn-peptide	P	MS	Leu	Thr	Val	Asp	Asn	Ser	Phe	Glu	Van Damme et al., 2009
probable rRNA-processing protein EBP2	Q99848	1-306	peptide-Asp208+Lys-peptide	N	MS	Gly	Phe	Ser	Asp	Lys	Leu	Asp	Phe	Van Damme et al., 2009
Probable rRNA-processing protein EBP2	Q99848	1-306	peptide-Asp216+Gln-peptide	P	MS	Leu	Glu	Gly	Asp	Gln	Lys	Pro	Leu	Van Damme et al., 2009
proliferation-associated protein 2G4	P50580	2-394	peptide-Asp227+Val-peptide	P	MS	Tyr	Ala	Val	Asp	Val	Leu	Val	Ser	Van Damme et al., 2009
Proliferation-associated protein 2G4	P50580	2-394	peptide-Asp341+Leu-peptide	P	MS	Phe	Glu	Pro	Asp	Leu	Tyr	Lys	Ser	Van Damme et al., 2009
Proline-rich protein PRCC	Q92733	1-491	peptide-Asp385+Ala-peptide	P	MS	Ile	Ala	Pro	Asp	Ala	Ser	Phe	Ile	Van Damme et al., 2009
Protein DGCR14	Q96DF8	1-476	peptide-Asp283+Gly-peptide	P	MS	Val	Gly	Pro	Asp	Gly	Lys	Glu	Leu	Van Damme et al., 2009
protein FAM111A	Q9D2L9	1-613	peptide-Asp41+Ser-peptide	P	MS	Val	Lys	Val	Asp	Ser	Lys	Lys	Met	Van Damme et al., 2009
protein HEXIM1	Q8R409	1-356	peptide-Asp255+Gly-peptide	P	MS	Met	Gly	Gly	Asp	Gly	Ser	Glu	Phe	Van Damme et al., 2009
Protein IWS1 homolog	Q8C1D8	1-766	peptide-Asp9+Gln-peptide	P	MS	Tyr	Ser	Gly	Asp	Gln	Ser	Asp	Asp	Van Damme et al., 2009
Protein IWS1 homolog	Q8C1D8	1-766	peptide-Asp457+Ser-peptide	P	MS	Glu	Ala	Glu	Asp	Ser	Asp	Ser	Asp	Van Damme et al., 2009
Protein kinase C alpha type	P17252	2-672	peptide-Asp378+Asp-peptide	P	MS	Val	Ile	Gln	Asp	Asp	Asp	Val	Glu	Van Damme et al., 2009
Protein kinase C beta type	P05771	2-671	peptide-Asp381+Asp-peptide	P	MS	Val	Ile	Gln	Asp	Asp	Asp	Val	Glu	Van Damme et al., 2009
Protein kinase C delta type	Q05655	1-676	peptide-Asp388+Asp-peptide	P	MS	Val	Leu	Ile	Asp	Asp	Asp	Val	Glu	Van Damme et al., 2009
Protein kinase C theta type	Q04759	1-706	peptide-Asp419+Asp-peptide	P	MS	Val	Leu	Met	Asp	Asp	Asp	Val	Glu	Van Damme et al., 2009
protein LTV1 homolog	Q6NSQ7	1-470	peptide-Asp120+Val-peptide	P	MS	Phe	Glu	Glu	Asp	Val	Gly	Leu	Leu	Van Damme et al., 2009
Protein LTV1 homolog	Q96GA3	1-475	peptide-Asp121+Val-peptide	P	MS	Phe	Glu	Glu	Asp	Val	Gly	Leu	Leu	Van Damme et al., 2009
Protein LYRIC	Q86UE4	1-582	peptide-Asp101+Asp-peptide	P	MS	Ala	Ala	Pro	Asp	Asp	Leu	Ala	Leu	Van Damme et al., 2009
Protein phosphatase 1G	O15355	1-546	peptide-Asp326+Ser-peptide	P	MS	Pro	Gly	Ser	Asp	Ser	Gly	Thr	Thr	Van Damme et al., 2009
Protein RRP5 homolog	Q6NS46	2-1862	peptide-Asp30+Asn-peptide	P	MS	Val	Glu	Gln	Asp	Asn	Leu	Phe	Asp	Van Damme et al., 2009
Protein SON	P18583	1-2426	peptide-Asp159+Ser-peptide	P	MS	Leu	Lys	Phe	Asp	Ser	Glu	Pro	Ser	Van Damme et al., 2009
protein VPRBP	Q80TR8	1-1506	peptide-Asp217+Tyr-peptide	P	MS	Val	Asp	Met	Asp	Tyr	Gly	Asp	Met	Van Damme et al., 2009
prothymosin alpha	P26350	2-111	peptide-Asp7+Thr-peptide	P	MS	Ala	Ala	Val	Asp	Thr	Ser	Ser	Glu	Van Damme et al., 2009
Prothymosin alpha	P06454	2-111	peptide-Asp7+Thr-peptide	P	MS	Ala	Ala	Val	Asp	Thr	Ser	Ser	Glu	Van Damme et al., 2009
Prothymosin alpha	P26350	2-111	peptide-Asp76+Gly-peptide	P	MS	Glu	Glu	Glu	Asp	Gly	Asp	Glu	Asp	Van Damme et al., 2009
proto-oncogene tyrosine-protein kinase ABL1	P00520	1-1123	peptide-Asp36+Phe-peptide	N	CS	Val	Ala	Ser	Asp	Phe	Glu	Pro	Gln	Loeb et al., 2006	25603
Putative 60S ribosomal protein L13a-like MGC87657	Q6NVV1	1-102	peptide-Ala36+Ala-peptide	P	MS	Val	Val	Pro	Ala	Ala	Leu	Lys	Val	Van Damme et al., 2009
Putative elongation factor 1-alpha-like 3	Q5VTE0	1-462	peptide-Asp252+Val-peptide	P	MS	Pro	Leu	Gln	Asp	Val	Tyr	Lys	Ile	Van Damme et al., 2009
Putative elongation factor 1-alpha-like 3	Q5VTE0	1-462	peptide-Asp398+Ala-peptide	P	MS	Lys	Ser	Gly	Asp	Ala	Ala	Ile	Val	Van Damme et al., 2009
Putative elongation factor 1-alpha-like 3	Q5VTE0	1-462	peptide-Glu413+Ser-peptide	P	MS	Met	Cys	Val	Glu	Ser	Phe	Ser	Asp	Van Damme et al., 2009
putative RNA-binding protein Luc7-like 2	Q7TNC4	1-392	peptide-Asp12+Gln-peptide	P	MS	Ala	Met	Leu	Asp	Gln	Leu	Met	Gly	Van Damme et al., 2009
Putative RNA-binding protein Luc7-like 2	Q9Y383	1-392	peptide-Asp12+Gln-peptide	P	MS	Ala	Met	Leu	Asp	Gln	Leu	Met	Gly	Van Damme et al., 2009
Putative uncharacterized protein encoded by LINC00467	Q9BRT7	1-94	peptide-Ala71+Ala-peptide	P	MS	Ile	Glu	Asp	Ala	Ala	Lys	Gly	Lys	Van Damme et al., 2009
Pyruvate kinase isozymes M1/M2	P14618	2-531	peptide-Asp236+Val-peptide	P	MS	Val	Glu	Gln	Asp	Val	Asp	Met	Val	Van Damme et al., 2009
Reticulon-4	Q9NQC3	1-1192	peptide-Asp80+Phe-peptide	P	MS	Pro	Leu	Met	Asp	Phe	Gly	Asn	Asp	Van Damme et al., 2009
Rho GTPase-activating protein 15	Q811M1	1-481	peptide-Asp56+Ala-peptide	P	MS	Ile	Leu	Thr	Asp	Ala	Gly	Lys	Val	Van Damme et al., 2009
rho guanine nucleotide exchange factor 1	Q61210	1-920	peptide-Asp290+Ala-peptide	P	MS	Val	Glu	Ala	Asp	Ala	Glu	Lys	Pro	Van Damme et al., 2009
ribosome biogenesis regulatory protein homolog	Q9CYH6	1-365	peptide-Asp260+Phe-peptide	P	MS	Leu	Phe	Gly	Asp	Phe	Ala	Ala	Glu	Van Damme et al., 2009
Rltpr protein	Q14BI8	1-205	peptide-Asp100+Ile-peptide	P	MS	Pro	Ala	Pro	Asp	Ile	Leu	Ser	Leu	Van Damme et al., 2009
RNA-binding protein 10	Q3TIY0	1-930	peptide-Asp691+Ala-peptide	P	MS	Ala	Thr	Ala	Asp	Ala	Gly	Tyr	Ala	Van Damme et al., 2009
RNA-binding protein 10	Q99KG3	1-930	peptide-Asp691+Ala-peptide	P	MS	Ala	Thr	Ala	Asp	Ala	Gly	Tyr	Ala	Van Damme et al., 2009
RNA-binding protein 28	Q9NW13	1-759	peptide-Asp314+Lys-peptide	N	MS	Glu	Gln	Glu	Asp	Lys	Ala	Val	Gln	Van Damme et al., 2009
RNA-binding protein 8A	Q9Y5S9	2-174	peptide-Asp53+Tyr-peptide	P	MS	Met	Arg	Glu	Asp	Tyr	Asp	Ser	Val	Van Damme et al., 2009
RNA-binding protein PNO1	Q9CPS7	1-248	peptide-Asp62+Gln-peptide	P	MS	Leu	Ser	Gly	Asp	Gln	Leu	Leu	Thr	Van Damme et al., 2009
ROD1 regulator of differentiation 1	F7C521	1-87	peptide-Asp9+Leu-peptide	P	MS	Val	Val	Thr	Asp	Leu	Ile	Ala	Val	Van Damme et al., 2009
RRP15-like protein	Q9Y3B9	2-282	peptide-Asp151+Val-peptide	P	MS	Val	Lys	Pro	Asp	Val	Val	Gln	Asp	Van Damme et al., 2009
S1 RNA-binding domain-containing protein 1	Q8N5C6	1-995	peptide-Asn88+Ser-peptide	P	MS	Glu	Glu	Leu	Asn	Ser	Ser	Val	Ala	Van Damme et al., 2009
scaffold attachment factor B1	Q15424	1-915	peptide-Asp567+Lys-peptide	N	MS	Val	Val	Met	Asp	Lys	Ser	Lys	Gly	Van Damme et al., 2009
serine/arginine repetitive matrix protein 1	Q52KI8	1-946	peptide-Asp466+Lys-peptide	P	MS	Ser	Glu	Glu	Asp	Lys	Gly	Ser	Lys	Van Damme et al., 2009	25902
serine/arginine repetitive matrix protein 1	Q8IYB3	1-904	peptide-Asp468+Lys-peptide	N	MS	Ser	Glu	Glu	Asp	Lys	Gly	Gly	Lys	Van Damme et al., 2009
Serine/arginine repetitive matrix protein 2	Q8BTI8	1-2703	peptide-Asp836+Glu-peptide	P	MS	Met	Gln	Ala	Asp	Glu	Cys	Thr	Ala	Van Damme et al., 2009
serine/threonine-protein kinase 3	Q9JI10	1-497	peptide-Asp361+Leu-peptide	P	MS	Leu	Glu	Ser	Asp	Leu	Gly	Thr	Met	Van Damme et al., 2009
serine/threonine-protein kinase N1	P70268	1-946	peptide-Asp203+Glu-peptide	P	MS	Ala	Ala	Pro	Asp	Glu	Ala	Gln	Gly	Van Damme et al., 2009
Serum deprivation-response protein	O95810	2-425	peptide-Glu350+Ile-peptide	P	MS	Val	Glu	Gly	Glu	Ile	Ala	Glu	Glu	Van Damme et al., 2009
seryl bond			peptide-Ser+peptide	N		-	-	NPe	Ser	CPe	-	-	-	Froelich, 2004
SGT1 protein homolog	Q9CS74	1-641	peptide-Asp421+Gln-peptide	P	MS	Leu	Ser	Pro	Asp	Gln	Leu	Asp	Gln	Van Damme et al., 2009
signal-induced proliferation-associated protein 1	P46062	1-1037	peptide-Asp852+Leu-peptide	P	MS	Thr	Thr	Pro	Asp	Leu	Leu	Leu	Val	Van Damme et al., 2009
sororin	Q9CPY3	1-264	peptide-Asp125+Ser-peptide	P	MS	Val	Glu	Pro	Asp	Ser	Gly	Glu	Ala	Van Damme et al., 2009
splicing factor 3B subunit 1	Q99NB9	1-1304	peptide-Asp34+Ser-peptide	P	MS	Val	Gly	Leu	Asp	Ser	Thr	Gly	Tyr	Van Damme et al., 2009
splicing factor 3B subunit 1	O75533	1-1304	peptide-Asp483+Glu-peptide	N	MS	Val	Asp	Val	Asp	Glu	Ser	Thr	Leu	Van Damme et al., 2009
splicing factor 3B subunit 1	O75533	1-1304	peptide-Asp476+Lys-peptide	N	MS	Gln	Tyr	Phe	Asp	Lys	Leu	Leu	Val	Van Damme et al., 2009
splicing factor U2AF 65 kDa subunit	P26369	2-475	peptide-Asp128+Gly-peptide	P	MS	Met	Thr	Pro	Asp	Gly	Leu	Ala	Val	Van Damme et al., 2009
Splicing factor U2AF 65 kDa subunit	P26368	2-475	peptide-Asp128+Gly-peptide	P	MS	Met	Thr	Pro	Asp	Gly	Leu	Ala	Val	Van Damme et al., 2009
Splicing factor U2AF 65 kDa subunit	P26368	2-475	peptide-Leu130+Ala-peptide	P	MS	Pro	Asp	Gly	Leu	Ala	Val	Thr	Pro	Van Damme et al., 2009
squamous cell carcinoma antigen recognized by T-cells 3	Q9JLI8	2-962	peptide-Asp89+Glu-peptide	P	MS	Trp	Glu	Tyr	Asp	Glu	Glu	Glu	Glu	Van Damme et al., 2009
STE20-like serine/threonine-protein kinase	Q9H2G2	1-1235	peptide-Asp815+Ser-peptide	P	MS	Ile	Val	Thr	Asp	Ser	Asp	Ser	Lys	Van Damme et al., 2009
Striatin	O43815	1-780	peptide-Asp289+Phe-peptide	P	MS	Lys	Glu	Phe	Asp	Phe	Leu	Val	Thr	Van Damme et al., 2009
Striatin	O55106	1-780	peptide-Asp289+Phe-peptide	P	MS	Lys	Glu	Phe	Asp	Phe	Leu	Val	Thr	Van Damme et al., 2009
Striatin	O55106	1-780	peptide-Asp436+Ser-peptide	P	MS	Asn	Glu	Ala	Asp	Ser	Leu	Ala	Tyr	Van Damme et al., 2009
striatin-4	P58404	1-760	peptide-Asp320+Phe-peptide	P	MS	Asn	Glu	Phe	Asp	Phe	Leu	Gly	Ser	Van Damme et al., 2009
Suc-Ala-Ala-Pro-Asp-NHPhNO2			Suc-Ala-Ala-Pro-Asp+NHPhNO2	S		Ala	Ala	Pro	Asp	NAN	-	-	-	Froelich, 2004
suppressor of SWI4 1 homolog	Q91YU8	1-470	peptide-Asp361+Ser-peptide	P	MS	Ala	Asp	Gly	Asp	Ser	Asp	Ala	Glu	Van Damme et al., 2009
T-complex protein 1 subunit alpha	P17987	1-556	peptide-Asp359+Glu-peptide	P	MS	Ile	Cys	Asp	Asp	Glu	Leu	Ile	Leu	Van Damme et al., 2009
Targeting protein for Xklp2	Q9ULW0	1-747	peptide-Asp434+Leu-peptide	P	MS	Ile	Gly	Phe	Asp	Leu	Glu	Ile	Glu	Van Damme et al., 2009
TBC1 domain family member 7	Q9P0N9	1-293	peptide-His90+Ala-peptide	P	MS	Asp	Val	Leu	His	Ala	Leu	Lys	Val	Van Damme et al., 2009
Thyroid hormone receptor-associated protein 3	Q9Y2W1	1-955	peptide-Asp574+Ser-peptide	P	MS	Val	Arg	Met	Asp	Ser	Phe	Asp	Glu	Van Damme et al., 2009
transcription elongation factor SPT5	O55201	1-1082	peptide-Asp402+Leu-peptide	P	MS	Glu	Gly	Ile	Asp	Leu	Glu	Val	Val	Van Damme et al., 2009	25919
Transcription elongation factor SPT6	Q7KZ85	2-1726	peptide-Asn107+Leu-peptide	P	MS	Ile	Glu	Glu	Asn	Leu	Gly	Val	Lys	Van Damme et al., 2009
Transcription factor 25	Q8R3L2	1-676	peptide-Glu68+Asp-peptide	P	MS	Ile	Asn	Thr	Glu	Asp	Leu	Glu	Asp	Van Damme et al., 2009
Transcriptional repressor p66-alpha	Q86YP4	1-633	peptide-Asp102+Val-peptide	P	MS	Pro	Ser	Pro	Asp	Val	Ile	Val	Leu	Van Damme et al., 2009
treacle protein	O08784	1-1320	peptide-Asp668+Ser-peptide	P	MS	Leu	Glu	Glu	Asp	Ser	Ser	Ser	Glu	Van Damme et al., 2009
Tubulin alpha-1A chain	P68369	1-451	peptide-Asp69+Leu-peptide	P	MS	Val	Phe	Val	Asp	Leu	Glu	Pro	Thr	Van Damme et al., 2009
Tubulin alpha-1A chain	P68369	1-451	peptide-Asp251+Leu-peptide	P	MS	Leu	Asn	Val	Asp	Leu	Thr	Glu	Phe	Van Damme et al., 2009
Tubulin alpha-1A chain	Q71U36	1-451	peptide-Leu70+Glu-peptide	P	MS	Phe	Val	Asp	Leu	Glu	Pro	Thr	Val	Van Damme et al., 2009
Tubulin alpha-1A chain	Q71U36	1-451	peptide-Glu90+Gln-peptide	P	MS	Phe	His	Pro	Glu	Gln	Leu	Ile	Thr	Van Damme et al., 2009
Tubulin alpha-1A chain	Q71U36	1-451	peptide-Asp251+Leu-peptide	P	MS	Leu	Asn	Val	Asp	Leu	Thr	Glu	Phe	Van Damme et al., 2009
Tubulin alpha-1A chain	Q71U36	1-451	peptide-Asp367+Leu-peptide	P	MS	Pro	Gly	Gly	Asp	Leu	Ala	Lys	Val	Van Damme et al., 2009
tubulin alpha-1B chain	P05213	1-451	peptide-Asp69+Leu-peptide	P	MS	Val	Phe	Val	Asp	Leu	Glu	Pro	Thr	Van Damme et al., 2009
Tubulin alpha-1B chain	P05213	1-451	peptide-Asp251+Leu-peptide	P	MS	Leu	Asn	Val	Asp	Leu	Thr	Glu	Phe	Van Damme et al., 2009
Tubulin alpha-1B chain	P68363	1-451	peptide-Leu70+Glu-peptide	P	MS	Phe	Val	Asp	Leu	Glu	Pro	Thr	Val	Van Damme et al., 2009
Tubulin alpha-1B chain	P68363	1-451	peptide-Glu90+Gln-peptide	P	MS	Phe	His	Pro	Glu	Gln	Leu	Ile	Thr	Van Damme et al., 2009
Tubulin alpha-1B chain	P68363	1-451	peptide-Asp251+Leu-peptide	P	MS	Leu	Asn	Val	Asp	Leu	Thr	Glu	Phe	Van Damme et al., 2009
Tubulin alpha-1B chain	P68363	1-451	peptide-Asp367+Leu-peptide	P	MS	Pro	Gly	Gly	Asp	Leu	Ala	Lys	Val	Van Damme et al., 2009
Tubulin alpha-1C chain	P68373	1-449	peptide-Asp69+Leu-peptide	P	MS	Val	Phe	Val	Asp	Leu	Glu	Pro	Thr	Van Damme et al., 2009
Tubulin alpha-1C chain	P68373	1-449	peptide-Asp251+Leu-peptide	P	MS	Leu	Asn	Val	Asp	Leu	Thr	Glu	Phe	Van Damme et al., 2009
Tubulin alpha-1C chain	Q9BQE3	1-449	peptide-Leu70+Glu-peptide	P	MS	Phe	Val	Asp	Leu	Glu	Pro	Thr	Val	Van Damme et al., 2009
Tubulin alpha-1C chain	Q9BQE3	1-449	peptide-Glu90+Gln-peptide	P	MS	Phe	His	Pro	Glu	Gln	Leu	Ile	Thr	Van Damme et al., 2009
Tubulin alpha-1C chain	Q9BQE3	1-449	peptide-Asp251+Leu-peptide	P	MS	Leu	Asn	Val	Asp	Leu	Thr	Glu	Phe	Van Damme et al., 2009
Tubulin alpha-1C chain	Q9BQE3	1-449	peptide-Asp367+Leu-peptide	P	MS	Pro	Gly	Gly	Asp	Leu	Ala	Lys	Val	Van Damme et al., 2009
Tubulin alpha-3 chain	P05214	1-450	peptide-Asp251+Leu-peptide	P	MS	Leu	Asn	Val	Asp	Leu	Thr	Glu	Phe	Van Damme et al., 2009
Tubulin alpha-3C/D chain	Q13748	1-450	peptide-Glu90+Gln-peptide	P	MS	Phe	His	Pro	Glu	Gln	Leu	Ile	Thr	Van Damme et al., 2009
Tubulin alpha-3C/D chain	Q13748	1-450	peptide-Asp251+Leu-peptide	P	MS	Leu	Asn	Val	Asp	Leu	Thr	Glu	Phe	Van Damme et al., 2009
Tubulin alpha-3C/D chain	Q13748	1-450	peptide-Asp367+Leu-peptide	P	MS	Pro	Gly	Gly	Asp	Leu	Ala	Lys	Val	Van Damme et al., 2009
Tubulin alpha-3E chain	Q6PEY2	1-450	peptide-Asp251+Leu-peptide	P	MS	Leu	Asn	Val	Asp	Leu	Thr	Glu	Phe	Van Damme et al., 2009
Tubulin alpha-3E chain	Q6PEY2	1-450	peptide-Asp367+Leu-peptide	P	MS	Pro	Gly	Gly	Asp	Leu	Ala	Lys	Val	Van Damme et al., 2009
Tubulin alpha-4A chain	P68366	1-448	peptide-Asp69+Leu-peptide	P	MS	Val	Phe	Val	Asp	Leu	Glu	Pro	Thr	Van Damme et al., 2009
Tubulin alpha-4A chain	P68366	1-448	peptide-Glu90+Gln-peptide	P	MS	Phe	His	Pro	Glu	Gln	Leu	Ile	Thr	Van Damme et al., 2009
Tubulin alpha-4A chain	P68366	1-448	peptide-Asp251+Leu-peptide	P	MS	Leu	Asn	Val	Asp	Leu	Thr	Glu	Phe	Van Damme et al., 2009
Tubulin alpha-4A chain	P68366	1-448	peptide-Asp367+Leu-peptide	P	MS	Pro	Gly	Gly	Asp	Leu	Ala	Lys	Val	Van Damme et al., 2009
Tubulin alpha-4A chain	P68368	1-448	peptide-Asp251+Leu-peptide	P	MS	Leu	Asn	Val	Asp	Leu	Thr	Glu	Phe	Van Damme et al., 2009
Tubulin alpha-8 chain	Q9JJZ2	1-449	peptide-Asp251+Leu-peptide	P	MS	Leu	Asn	Val	Asp	Leu	Thr	Glu	Phe	Van Damme et al., 2009
Tubulin alpha-8 chain	Q9NY65	1-449	peptide-Glu90+Gln-peptide	P	MS	Phe	His	Pro	Glu	Gln	Leu	Ile	Thr	Van Damme et al., 2009
Tubulin alpha-8 chain	Q9NY65	1-449	peptide-Asp251+Leu-peptide	P	MS	Leu	Asn	Val	Asp	Leu	Thr	Glu	Phe	Van Damme et al., 2009
Tubulin alpha-8 chain	Q9NY65	1-449	peptide-Asp367+Leu-peptide	P	MS	Pro	Gly	Gly	Asp	Leu	Ala	Lys	Val	Van Damme et al., 2009
Tubulin beta chain	P07437	1-444	peptide-Asp39+Ser-peptide	P	MS	Tyr	His	Gly	Asp	Ser	Asp	Leu	Gln	Van Damme et al., 2009
Tubulin beta chain	P07437	1-444	peptide-Asp114+Ser-peptide	P	MS	Glu	Leu	Val	Asp	Ser	Val	Leu	Asp	Van Damme et al., 2009
Tubulin beta chain	P07437	1-444	peptide-Glu205+Ala-peptide	P	MS	Ile	Asp	Asn	Glu	Ala	Leu	Tyr	Asp	Van Damme et al., 2009
Tubulin beta-1 chain	A2AQ07	1-451	peptide-Glu205+Ala-peptide	P	MS	Ile	Asp	Asn	Glu	Ala	Leu	Tyr	Asp	Van Damme et al., 2009
Tubulin beta-1 chain	Q9H4B7	1-451	peptide-Glu205+Ala-peptide	P	MS	Ile	Asp	Asn	Glu	Ala	Leu	Tyr	Asp	Van Damme et al., 2009
Tubulin beta-2A chain	Q13885	1-445	peptide-Asp114+Ser-peptide	P	MS	Glu	Leu	Val	Asp	Ser	Val	Leu	Asp	Van Damme et al., 2009
Tubulin beta-2A chain	Q13885	1-445	peptide-Glu205+Ala-peptide	P	MS	Ile	Asp	Asn	Glu	Ala	Leu	Tyr	Asp	Van Damme et al., 2009
Tubulin beta-2A chain	Q7TMM9	1-445	peptide-Glu205+Ala-peptide	P	MS	Ile	Asp	Asn	Glu	Ala	Leu	Tyr	Asp	Van Damme et al., 2009
Tubulin beta-2B chain	Q9BVA1	1-445	peptide-Asp114+Ser-peptide	P	MS	Glu	Leu	Val	Asp	Ser	Val	Leu	Asp	Van Damme et al., 2009
Tubulin beta-2B chain	Q9BVA1	1-445	peptide-Glu205+Ala-peptide	P	MS	Ile	Asp	Asn	Glu	Ala	Leu	Tyr	Asp	Van Damme et al., 2009
Tubulin beta-2B chain	Q9CWF2	1-445	peptide-Glu205+Ala-peptide	P	MS	Ile	Asp	Asn	Glu	Ala	Leu	Tyr	Asp	Van Damme et al., 2009
Tubulin beta-3 chain	Q13509	1-450	peptide-Asp114+Ser-peptide	P	MS	Glu	Leu	Val	Asp	Ser	Val	Leu	Asp	Van Damme et al., 2009
Tubulin beta-3 chain	Q13509	1-450	peptide-Glu205+Ala-peptide	P	MS	Ile	Asp	Asn	Glu	Ala	Leu	Tyr	Asp	Van Damme et al., 2009
Tubulin beta-3 chain	Q9ERD7	1-450	peptide-Glu205+Ala-peptide	P	MS	Ile	Asp	Asn	Glu	Ala	Leu	Tyr	Asp	Van Damme et al., 2009
Tubulin beta-4A chain	P04350	1-444	peptide-Glu205+Ala-peptide	P	MS	Ile	Asp	Asn	Glu	Ala	Leu	Tyr	Asp	Van Damme et al., 2009
Tubulin beta-4A chain	Q9D6F9	1-444	peptide-Glu205+Ala-peptide	P	MS	Ile	Asp	Asn	Glu	Ala	Leu	Tyr	Asp	Van Damme et al., 2009
Tubulin beta-4B chain	P68371	1-445	peptide-Asp114+Ser-peptide	P	MS	Glu	Leu	Val	Asp	Ser	Val	Leu	Asp	Van Damme et al., 2009
Tubulin beta-4B chain	P68371	1-445	peptide-Glu205+Ala-peptide	P	MS	Ile	Asp	Asn	Glu	Ala	Leu	Tyr	Asp	Van Damme et al., 2009
Tubulin beta-4B chain	P68372	1-445	peptide-Glu205+Ala-peptide	P	MS	Ile	Asp	Asn	Glu	Ala	Leu	Tyr	Asp	Van Damme et al., 2009
Tubulin beta-5 chain	P99024	1-444	peptide-Glu205+Ala-peptide	P	MS	Ile	Asp	Asn	Glu	Ala	Leu	Tyr	Asp	Van Damme et al., 2009
Tubulin beta-6 chain	Q922F4	1-447	peptide-Glu205+Ala-peptide	P	MS	Ile	Asp	Asn	Glu	Ala	Leu	Tyr	Asp	Van Damme et al., 2009
Tubulin beta-6 chain	Q9BUF5	1-446	peptide-Glu205+Ala-peptide	P	MS	Ile	Asp	Asn	Glu	Ala	Leu	Tyr	Asp	Van Damme et al., 2009
U3 small nucleolar RNA-associated protein 18 homolog	Q9Y5J1	1-556	peptide-Asp98+Val-peptide	P	MS	Val	Phe	Gly	Asp	Val	Glu	Asn	Asp	Van Damme et al., 2009
U3 small nucleolar RNA-interacting protein 2	Q91WM3	1-475	peptide-Asp52+Ser-peptide	P	MS	Ile	Ser	Ser	Asp	Ser	Glu	Ser	Glu	Van Damme et al., 2009
U4/U6 small nuclear ribonucleoprotein Prp3	O43395	1-683	peptide-Asp97+Asp-peptide	P	MS	Val	Phe	Gly	Asp	Asp	Ser	Glu	Ile	Van Damme et al., 2009
U4/U6.U5 tri-snRNP-associated protein 1	Q9Z315	1-806	peptide-Asp278+Lys-peptide	P	MS	Thr	Leu	Lys	Asp	Lys	Gly	Val	Leu	Van Damme et al., 2009	25926
U5 small nuclear ribonucleoprotein 200 kDa helicase	O75643	1-2136	peptide-Asp390+Leu-peptide	P	MS	Met	Asp	Thr	Asp	Leu	Glu	Thr	Met	Van Damme et al., 2009
U7 snRNA-associated Sm-like protein LSm11	P83369	1-360	peptide-Asp29+Ser-peptide	P	MS	Val	Ser	Ser	Asp	Ser	Phe	Asp	Pro	Van Damme et al., 2009
ubiquitin interaction motif-containing protein 1	Q5U5Q9	1-727	peptide-Asp352+Met-peptide	P	MS	Ile	Ser	Glu	Asp	Met	Gly	Asp	Glu	Van Damme et al., 2009
ubiquitin-conjugating enzyme E2 O	Q6ZPJ3	1-1288	peptide-Asp36+Ser-peptide	P	MS	Pro	Ala	Thr	Asp	Ser	Ala	Ser	Gly	Van Damme et al., 2009
Ubiquitin-protein ligase E3A	O08759	1-885	peptide-Glu414+Ser-peptide	P	MS	Pro	Ile	Pro	Glu	Ser	Ser	Glu	Leu	Van Damme et al., 2009
ubiquitinyl hydrolase-UCH37	Q9WUP7	1-329	peptide-Asp251+Gln-peptide	P	MS	Met	Asp	Thr	Asp	Gln	Gly	Ser	Thr	Van Damme et al., 2009
uncharacterized protein C7orf50 homolog	Q6PDQ0	1-195	peptide-Asp36+Lys-peptide	P	MS	Ala	Gly	Pro	Asp	Lys	Glu	Thr	Ala	Van Damme et al., 2009	25717
Uncharacterized protein C7orf50 homolog	Q9CXL3	1-195	peptide-Asp36+Lys-peptide	P	MS	Ala	Gly	Pro	Asp	Lys	Glu	Thr	Ala	Van Damme et al., 2009
Uncharacterized protein C9orf78	Q9NZ63	1-289	peptide-Asp177+Leu-peptide	P	MS	Pro	Glu	Val	Asp	Leu	Gly	Ile	Asp	Van Damme et al., 2009
unconventional prefoldin RPB5 interactor	Q3TLD5	1-531	peptide-Asp419+Thr-peptide	P	MS	Val	Cys	Ser	Asp	Thr	Ser	Glu	Ser	Van Damme et al., 2009
UTP18, small subunit processome component	Q5SSI6	1-552	peptide-Asp92+Val-peptide	P	MS	Val	Phe	Gly	Asp	Val	Glu	Asp	Asp	Van Damme et al., 2009
vacuolar protein sorting-associated protein VTA1 homolog	Q9CR26	1-309	peptide-Asp255+Leu-peptide	P	MS	Val	Asp	Pro	Asp	Leu	Tyr	Thr	Ala	Van Damme et al., 2009
Vesicle-fusing ATPase	P46459	1-744	peptide-Asp466+Met-peptide	P	MS	Val	Glu	Val	Asp	Met	Glu	Lys	Ala	Van Damme et al., 2009
vimentin	P20152	2-466	peptide-Asp82+Ser-peptide	P	MS	Leu	Leu	Gln	Asp	Ser	Val	Asp	Phe	Van Damme et al., 2009
Vimentin	P08670	2-466	peptide-Asp259+Val-peptide	P	MS	Ile	Asp	Val	Asp	Val	Ser	Lys	Pro	Van Damme et al., 2009
Vimentin	P20152	2-466	peptide-Asp259+Val-peptide	P	MS	Ile	Asp	Val	Asp	Val	Ser	Lys	Pro	Van Damme et al., 2009
WD repeat-containing protein 3	Q9UNX4	1-943	peptide-Asp252+Gly-peptide	P	MS	Glu	Ala	Glu	Asp	Gly	Ala	Phe	Glu	Van Damme et al., 2009
WD repeat-containing protein 55	Q9CX97	1-388	peptide-Asp12+Ser-peptide	P	MS	Pro	Ala	Glu	Asp	Ser	Asn	Asn	Glu	Van Damme et al., 2009
Zinc finger CCCH domain-containing protein 18	Q86VM9	1-953	peptide-Asp734+Leu-peptide	P	MS	Met	Tyr	Ala	Asp	Leu	Ala	Ser	Pro	Van Damme et al., 2009
zinc finger CCCH domain-containing protein 4	Q6ZPZ3	1-1304	peptide-Asp67+Gly-peptide	P	MS	Leu	Glu	Asp	Asp	Gly	Ala	Glu	Glu	Van Damme et al., 2009
zinc finger CCHC domain-containing protein 8	Q9CYA6	1-709	peptide-Asp516+Ala-peptide	P	MS	Met	Asp	Glu	Asp	Ala	Leu	Thr	Leu	Van Damme et al., 2009
Zinc finger CCHC domain-containing protein 8	Q6NZY4	1-707	peptide-Asp513+Ala-peptide	P	MS	Val	Asp	Glu	Asp	Ala	Leu	Thr	Leu	Van Damme et al., 2009
Zinc finger protein 318	Q5VUA4	1-2279	peptide-Asp602+Ile-peptide	P	MS	Ile	Gly	Leu	Asp	Ile	Gly	Val	Ala	Van Damme et al., 2009
Zinc finger Ran-binding domain-containing protein 2	O95218	1-330	peptide-Asp192+Ser-peptide	P	MS	Glu	Glu	Glu	Asp	Ser	Asn	Lys	Lys	Van Damme et al., 2009