Substrates for peptidase M10.004: matrix metallopeptidase-9

Summary Gene structure Alignment Tree Sequences Sequence features Distribution Structure Literature Substrates Pharma

Peptide and protein substrates that are thought to be physiologically relevant are indicated by P. Peptide and protein substrates that are thought to be pathologically relevant are indicated by D. Peptide and protein substrates that are not physiologically relevant are indicated by N. Synthetic substrates are indicated by S. Click on the symbol to show only physiological, non-physiological or synthetic substrates, or here to display all substrates. How cleavage sites have been identified are indicated by the following evidence codes: NT = N-terminal sequencing, MS = mass spectroscopy, MU = mutation, CS = consensus sequence, LC = liquid chromatography. To see all annotated cleavages for a protein substrate, click on the UniProt Accession.

Substrate	Uniprot	Residue range	Cleavage Site	Cleavage type	Evidence	P4	P3	P2	P1	P1'	P2'	P3'	P4'	Reference	CutDB
A disintegrin and metalloproteinase with thrombospondin motifs 4 precursor	O75173	1-837	peptide-Arg212+Phe-peptide	P	NT	Arg	Ala	Lys	Arg	Phe	Ala	Ser	Leu	Tortorella et al., 2005
Ac-Pro-Leu-Gly-Leu-Arg-Ser-Lys			Ac-Pro-Leu-Gly-Leu+Arg-Ser-Lys	S		Pro	Leu	Gly	Leu	Arg	Ser	Lys	-	Huang et al., 2013
Ac-Pro-Leu-Gly-Leu-Arg-Ser-Lys			Ac-Pro-Leu-Gly-Leu-Arg+Ser-Lys	S		Leu	Gly	Leu	Arg	Ser	Lys	-	-	Huang et al., 2013
Ac-Pro-Leu-Ser-Leu-Arg-Ser-Lys			Ac-Pro-Leu-Ser-Leu+Arg-Ser-Lys	S		Pro	Leu	Ser	Leu	Arg	Ser	Lys	-	Huang et al., 2013
Ac-Pro-Leu-Ser-Leu-Arg-Ser-Lys			Ac-Pro-Leu-Ser-Leu-Arg+Ser-Lys	S		Leu	Ser	Leu	Arg	Ser	Lys	-	-	Huang et al., 2013
aggrecan core protein	P16112	17-2415	peptide-Asn360+Phe-peptide	P		Ile	Pro	Glu	Asn	Phe	Phe	Gly	Val	Fosang et al., 1992	18100
Aggrecan core protein	Q29011	1-537	peptide-Asn344+Phe-peptide	P	NT	Ile	Pro	Glu	Asn	Phe	Phe	Gly	Val	Fosang et al., 1993	18070
alpha crystallin B chain	P02511	1-175	peptide-Pro16+Phe-peptide	P		Pro	Phe	Phe	Pro	Phe	His	Ser	Pro	Starckx et al., 2003	18274
alpha crystallin B chain	P02511	1-175	peptide-Arg22+Leu-peptide	P		Ser	Pro	Ser	Arg	Leu	Phe	Asp	Gln	Starckx et al., 2003	18276
alpha crystallin B chain	P02511	1-175	peptide-Tyr48+Leu-peptide	P		Ser	Pro	Phe	Tyr	Leu	Arg	Pro	Pro	Starckx et al., 2003	18278
alpha crystallin B chain	P02511	1-175	peptide-Trp60+Phe-peptide	P		Ala	Pro	Ser	Trp	Phe	Asp	Thr	Gly	Starckx et al., 2003	18279
alpha crystallin B chain	P02511	1-175	peptide-Glu88+Leu-peptide	P		Ser	Pro	Glu	Glu	Leu	Lys	Val	Lys	Starckx et al., 2003	18280
alpha crystallin B chain	P02511	1-175	peptide-Thr132+Ile-peptide	P		Asp	Pro	Leu	Thr	Ile	Thr	Ser	Ser	Starckx et al., 2003	18281
alpha crystallin B chain	P02511	1-175	peptide-Lys150+Gln-peptide	P		Gly	Pro	Arg	Lys	Gln	Val	Ser	Gly	Starckx et al., 2003	18282
alpha crystallin B chain	P02511	1-175	peptide-Gly112+Phe-peptide	P		Asp	Glu	His	Gly	Phe	Ile	Ser	Arg	Starckx et al., 2003
alpha crystallin B chain	P02511	1-175	Met1+Asp-peptide	P		-	-	-	Met	Asp	Ile	Ala	Ile	Starckx et al., 2003
alpha crystallin B chain	P02511	1-175	peptide-Asp2+Ile-peptide	P		-	-	Met	Asp	Ile	Ala	Ile	His	Starckx et al., 2003
alpha crystallin B chain	P02511	1-175	peptide-Ala4+Ile-peptide	P		Met	Asp	Ile	Ala	Ile	His	His	Pro	Starckx et al., 2003
alpha crystallin B chain	P02511	1-175	peptide-Asp25+Gln-peptide	P		Arg	Leu	Phe	Asp	Gln	Phe	Phe	Gly	Starckx et al., 2003
alpha crystallin B chain	P02511	1-175	peptide-Glu30+His-peptide	P		Phe	Phe	Gly	Glu	His	Leu	Leu	Glu	Starckx et al., 2003
alpha crystallin B chain	P02511	1-175	peptide-Leu32+Leu-peptide	P		Gly	Glu	His	Leu	Leu	Glu	Ser	Asp	Starckx et al., 2003
alpha crystallin B chain	P02511	1-175	peptide-Ser35+Asp-peptide	P		Leu	Leu	Glu	Ser	Asp	Leu	Phe	Pro	Starckx et al., 2003
alpha crystallin B chain	P02511	1-175	peptide-Thr40+Ser-peptide	P		Leu	Phe	Pro	Thr	Ser	Thr	Ser	Leu	Starckx et al., 2003
alpha crystallin B chain	P02511	1-175	peptide-Thr42+Ser-peptide	P		Pro	Thr	Ser	Thr	Ser	Leu	Ser	Pro	Starckx et al., 2003
alpha crystallin B chain	P02511	1-175	peptide-Phe47+Tyr-peptide	P		Leu	Ser	Pro	Phe	Tyr	Leu	Arg	Pro	Starckx et al., 2003
alpha crystallin B chain	P02511	1-175	peptide-Glu67+Met-peptide	P		Gly	Leu	Ser	Glu	Met	Arg	Leu	Glu	Starckx et al., 2003
alpha crystallin B chain	P02511	1-175	peptide-Arg69+Leu-peptide	P		Ser	Glu	Met	Arg	Leu	Glu	Lys	Asp	Starckx et al., 2003
alpha crystallin B chain	P02511	1-175	peptide-Glu99+Val-peptide	P		Asp	Val	Ile	Glu	Val	His	Gly	Lys	Starckx et al., 2003
alpha crystallin B chain	P02511	1-175	peptide-Val100+His-peptide	P		Val	Ile	Glu	Val	His	Gly	Lys	His	Starckx et al., 2003
alpha crystallin B chain	P02511	1-175	peptide-Gly102+Lys-peptide	P		Glu	Val	His	Gly	Lys	His	Glu	Glu	Starckx et al., 2003
alpha crystallin B chain	P02511	1-175	peptide-Lys121+Tyr-peptide	P		Phe	His	Arg	Lys	Tyr	Arg	Ile	Pro	Starckx et al., 2003
alpha crystallin B chain	P02511	1-175	peptide-Tyr122+Arg-peptide	P		His	Arg	Lys	Tyr	Arg	Ile	Pro	Ala	Starckx et al., 2003
alpha crystallin B chain	P02511	1-175	peptide-Ser136+Leu-peptide	P		Ile	Thr	Ser	Ser	Leu	Ser	Ser	Asp	Starckx et al., 2003
alpha crystallin B chain	P02511	1-175	peptide-Pro160+Ile-peptide	P		Arg	Thr	Ile	Pro	Ile	Thr	Arg	Glu	Starckx et al., 2003
alpha crystallin B chain	P02511	1-175	peptide-Val169+Thr-peptide	P		Lys	Pro	Ala	Val	Thr	Ala	Ala	Pro	Starckx et al., 2003
alpha crystallin B chain	P02511	1-175	peptide-Asn78+Leu-peptide	P		Phe	Ser	Val	Asn	Leu	Asp	Val	Lys	Starckx et al., 2003
alpha crystallin B chain	P02511	1-175	peptide-Phe54+Leu-peptide	P		Pro	Pro	Ser	Phe	Leu	Arg	Ala	Pro	Starckx et al., 2003	18277
alpha-1-peptidase inhibitor	P01009	25-418	peptide-Phe376+Leu-peptide	P		Gly	Ala	Met	Phe	Leu	Glu	Ala	Ile	Nelson et al., 1998	19090
alpha-1-peptidase inhibitor	P01009	25-418	peptide-Pro381+Met-peptide	P		Glu	Ala	Ile	Pro	Met	Ser	Ile	Pro	Nelson et al., 1998	19109
alpha-2-macroglobulin	P01023	24-1474	peptide-Gly702+Leu-peptide	P		Gly	Pro	Glu	Gly	Leu	Arg	Val	Gly	Arbelez et al., 1997
alpha-synuclein	P37840	1-140	peptide-Asp98+Gln-peptide	P		Val	Lys	Lys	Asp	Gln	Leu	Gly	Lys	Levin etal, 2008
alpha-synuclein	P37840	1-140	peptide-Ala78+Gln-peptide	P		Thr	Ala	Val	Ala	Gln	Lys	Thr	Val	Levin etal, 2008
alpha-synuclein	P37840	1-140	peptide-Val66+Gly-peptide	P		Val	Thr	Asn	Val	Gly	Gly	Ala	Val	Levin etal, 2008
alpha-synuclein	P37840	1-140	peptide-Val70+Val-peptide	P		Gly	Gly	Ala	Val	Val	Thr	Gly	Val	Levin etal, 2008
alpha-synuclein	P37840	1-140	peptide-Gly73+Val-peptide	P		Val	Val	Thr	Gly	Val	Thr	Ala	Val	Levin etal, 2008
alpha-synuclein	P37840	1-140	peptide-Val74+Thr-peptide	P		Val	Thr	Gly	Val	Thr	Ala	Val	Ala	Levin etal, 2008
alpha-synuclein	P37840	1-140	peptide-Val71+Thr-peptide	P		Gly	Ala	Val	Val	Thr	Gly	Val	Thr	Levin etal, 2008
alpha-synuclein	P37840	1-140	peptide-Ala18+Ala-peptide	P		Val	Val	Ala	Ala	Ala	Glu	Lys	Thr	Levin etal, 2008
alpha-synuclein	P37840	1-140	peptide-Gly7+Leu-peptide	P		Phe	Met	Lys	Gly	Leu	Ser	Lys	Ala	Levin etal, 2008
alpha-synuclein	P37840	1-140	peptide-Phe4+Met-peptide	P		Met	Asp	Val	Phe	Met	Lys	Gly	Leu	Levin etal, 2008
Barrier-to-autointegration factor	O54962	1-89	peptide-Ser22+Leu-peptide	N	MS	Pro	Val	Gly	Ser	Leu	Ala	Gly	Ile	Prudova et al., 2010
beta-amyloid protein 42	P05067	672-713	peptide-Lys687+Leu-peptide	P		His	His	Gln	Lys	Leu	Val	Phe	Phe	Yan et al., 2006	18625
beta-amyloid protein 42	P05067	672-713	peptide-Phe691+Ala-peptide	P		Leu	Val	Phe	Phe	Ala	Glu	Asp	Val	Yan et al., 2006	18632
beta-amyloid protein 42	P05067	672-713	peptide-Ala701+Ile-peptide	P		Asn	Lys	Gly	Ala	Ile	Ile	Gly	Leu	Yan et al., 2006	18634
beta-amyloid protein 42	P05067	672-713	peptide-Gly704+Leu-peptide	P		Ala	Ile	Ile	Gly	Leu	Met	Val	Gly	Yan et al., 2006	18636
beta-amyloid protein 42	P05067	672-713	peptide-Leu705+Met-peptide	P		Ile	Ile	Gly	Leu	Met	Val	Gly	Gly	Yan et al., 2006	18638
beta-amyloid protein 42	P05067	672-713	peptide-Asp694+Val-peptide	P		Phe	Ala	Glu	Asp	Val	Gly	Ser	Asn	Yan et al., 2006
Beta-dystroglycan	Q14118	654-895	peptide-His715+Leu-peptide	N	MS	Ser	Cys	Arg	His	Leu	Gln	Phe	Ile	Bozzi et al., 2009
big endothelin 1	P05305	53-90	peptide-Gly84+Leu-peptide	P		Val	Pro	Tyr	Gly	Leu	Gly	Ser	Pro	Fernandez-Patron et al., 1999	18589
biglycan	P21810	38-368	peptide-Glu196+Asn-peptide	P	MS	Asn	Pro	Leu	Glu	Asn	Ser	Gly	Phe	Zhen et al., 2008	22372
biglycan	P21810	38-368	peptide-Lys219+Leu-peptide	P	MS	Ser	Glu	Ala	Lys	Leu	Thr	Gly	Ile	Zhen et al., 2008	22373
biglycan	P21810	38-368	peptide-Gly84+Leu-peptide	P	MS	Ser	Asp	Leu	Gly	Leu	Lys	Ser	Val	Zhen et al., 2008	22374
biglycan	P21810	38-368	peptide-Glu104+Leu-peptide	P	MS	Asp	Ile	Ser	Glu	Leu	Arg	Lys	Asp	Zhen et al., 2008	22375
C-C motif chemokine 7	P80098	24-99	Pro-Val-Gly27+Ile-peptide	N	MS	-	Pro	Val	Gly	Ile	Asn	Thr	Ser	Prudova et al., 2010
C-terminal-binding protein 2	P56546	1-445	peptide-Pro34+Leu-peptide	N	MS	His	Pro	Arg	Pro	Leu	Val	Ala	Leu	Prudova et al., 2010
C-X-C motif chemokine 10	P02778	22-98	peptide-Val89+Ser-peptide	P		Leu	Lys	Ala	Val	Ser	Lys	Glu	Arg	Van den Steen et al., 2003	18609
C-X-C motif chemokine 11	O14625	22-94	peptide-Phe25+Lys-peptide	P		Phe	Pro	Met	Phe	Lys	Arg	Gly	Arg	Cox et al., 2008
C-X-C motif chemokine 11	O14625	22-94	peptide-Ser79+Lys-peptide	P		Asn	Pro	Lys	Ser	Lys	Gln	Ala	Arg	Cox et al., 2008
C-X-C motif chemokine 5	P42830	37-114	peptide-Cys75+Ser-peptide	P		Gly	Pro	Gln	Cys	Ser	Lys	Val	Glu	Van den Steen et al., 2003	18600
C-X-C motif chemokine 5	P42830	37-114	peptide-Ser83+Leu-peptide	P		Val	Val	Ala	Ser	Leu	Lys	Asn	Gly	Van den Steen et al., 2003	18601
C-X-C motif chemokine 5	P42830	37-114	peptide-Glu46+Leu-peptide	P		Val	Leu	Arg	Glu	Leu	Arg	Cys	Val	Van den Steen et al., 2003	3244
C-X-C motif chemokine 5	P42830	37-114	peptide-Asn65+Leu-peptide	P		Met	Ile	Ser	Asn	Leu	Gln	Val	Phe	Van den Steen et al., 2003	18599
C-X-C motif chemokine 5	P42830	37-114	peptide-Ala42+Val-peptide	P		Pro	Ala	Ala	Ala	Val	Leu	Arg	Glu	Van den Steen et al., 2003	18597
C-X-C motif chemokine 5	P42830	37-114	peptide-Ala41+Ala-peptide	P		Gly	Pro	Ala	Ala	Ala	Val	Leu	Arg	Van den Steen et al., 2003	18596
C-X-C motif chemokine 5	P42830	37-114	peptide-Val43+Leu-peptide	P		Ala	Ala	Ala	Val	Leu	Arg	Glu	Leu	Van den Steen et al., 2003	18598
C-X-C motif chemokine 9	Q07325	23-125	peptide-Lys112+Val-peptide	P		Lys	Val	Leu	Lys	Val	Arg	Lys	Ser	Van den Steen et al., 2003	18611
C-X-C motif chemokine 9	Q07325	23-125	peptide-Lys115+Ser-peptide	P		Lys	Val	Arg	Lys	Ser	Gln	Arg	Ser	Van den Steen et al., 2003	18612
C-X-C motif chemokine 9	Q07325	23-125	peptide-Ser116+Gln-peptide	P		Val	Arg	Lys	Ser	Gln	Arg	Ser	Arg	Van den Steen et al., 2003	18613
Chitinase-3-like protein 3	O35744	22-398	peptide-Ala327+Ala-peptide	P	NT	Val	Pro	Tyr	Ala	Tyr	Gln	Gly	Asn	Greenlee et al., 2006
Chitinase-3-like protein 3	O35744	1-398	peptide-Ser21+Tyr-peptide	P	NT	Leu	Gly	Ser	Ser	Tyr	Gln	Leu	Met	Greenlee et al., 2006
collagen alpha 1(XI) chain	P12107	512-1563	peptide-Gly439+Val-peptide	P		Gly	Pro	Gly	Gly	Val	Val	Gly	Pro	Niyibizi et al., 1994	18227
Collagen alpha-1(I) chain	P11087	152-1207	peptide-Gly993+Leu-peptide	N	MS	Gly	Pro	Pro	Gly	Leu	Ala	Gly	Pro	Prudova et al., 2010
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly663+Phe-peptide	P		Gly	Pro	Ser	Gly	Phe	Gln	Gly	Leu	Van den Steen et al., 2004	18496
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly699+Glu-peptide	P		Gly	Pro	Arg	Gly	Glu	Arg	Gly	Phe	Van den Steen et al., 2004	18497
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly561+Leu-peptide	P		Gly	Ala	Arg	Gly	Leu	Thr	Gly	Arg	Van den Steen et al., 2004	18493
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly537+Leu-peptide	P		Gly	Pro	Ser	Gly	Leu	Ala	Gly	Pro	Van den Steen et al., 2004	18533
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly627+Leu-peptide	P		Gly	Ala	Pro	Gly	Leu	Arg	Gly	Leu	Van den Steen et al., 2004	18495
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly543+Ala-peptide	P		Gly	Pro	Lys	Gly	Ala	Asn	Gly	Asp	Van den Steen et al., 2004	18492
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly507+Glu-peptide	P		Gly	Pro	Pro	Gly	Glu	Arg	Gly	Ala	Van den Steen et al., 2004	18490
collagen alpha-1(II) chain	P02458	182-1241	peptide-Val198+Met-peptide	P		Gln	Leu	Gly	Val	Met	Gln	Gly	Pro	Fukui et al., 2002	18182
collagen alpha-1(II) chain	P02458	182-1241	peptide-Met199+Gln-peptide	P		Leu	Gly	Val	Met	Gln	Gly	Pro	Met	Fukui et al., 2002	18183
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly594+Ala-peptide	P		Gly	Pro	Gln	Gly	Ala	Arg	Gly	Gln	Van den Steen et al., 2004	18494
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly273+Ala-peptide	P		Gly	Pro	Gln	Gly	Ala	Arg	Gly	Phe	Van den Steen et al., 2004	18512
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly222+Phe-peptide	P		Gly	Pro	Gln	Gly	Phe	Gln	Gly	Asn	Van den Steen et al., 2004	18513
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly327+Leu-peptide	P		Gly	Pro	Arg	Gly	Leu	Pro	Gly	Glu	Van den Steen et al., 2004	18514
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly339+Ala-peptide	P		Gly	Pro	Ala	Gly	Ala	Ala	Gly	Ala	Van den Steen et al., 2004	18515
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly342+Ala-peptide	P		Gly	Ala	Ala	Gly	Ala	Arg	Gly	Asn	Van den Steen et al., 2004	18516
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly387+Ala-peptide	P		Gly	Pro	Glu	Gly	Ala	Gln	Gly	Pro	Van den Steen et al., 2004	18519
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly405+Ala-peptide	P		Gly	Pro	Ala	Gly	Ala	Ser	Gly	Asn	Van den Steen et al., 2004	18520
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly453+Gln-peptide	P		Gly	Pro	Lys	Gly	Gln	Thr	Gly	Glu	Van den Steen et al., 2004	18521
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly486+Glu-peptide	P		Gly	Pro	Ala	Gly	Glu	Glu	Gly	Lys	Van den Steen et al., 2004	18522
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly714+Leu-peptide	P		Gly	Ala	Gln	Gly	Leu	Gln	Gly	Pro	Van den Steen et al., 2004	18540
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly720+Leu-peptide	P		Gly	Pro	Arg	Gly	Leu	Pro	Gly	Thr	Van den Steen et al., 2004	18541
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly747+Leu-peptide	P		Gly	Pro	Pro	Gly	Leu	Gln	Gly	Met	Van den Steen et al., 2004	18542
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly798+Ala-peptide	P		Gly	Pro	Ala	Gly	Ala	Asn	Gly	Glu	Van den Steen et al., 2004	18543
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly834+Phe-peptide	P		Gly	Pro	Ala	Gly	Phe	Ala	Gly	Pro	Van den Steen et al., 2004	18544
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly879+Val-peptide	P		Gly	Pro	Thr	Gly	Val	Thr	Gly	Pro	Van den Steen et al., 2004	18545
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly894+Ala-peptide	P		Gly	Pro	Pro	Gly	Ala	Thr	Gly	Phe	Van den Steen et al., 2004	18546
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly930+Ala-peptide	P		Gly	Pro	Lys	Gly	Ala	Arg	Gly	Asp	Van den Steen et al., 2004	18547
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly975+Leu-peptide	P		Gly	Pro	Gln	Gly	Leu	Ala	Gly	Gln	Van den Steen et al., 2004	18548
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly1026+Leu-peptide	P		Gly	Pro	Pro	Gly	Leu	Thr	Gly	Pro	Van den Steen et al., 2004	18550
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly1107+Ile-peptide	P		Gly	Ala	Arg	Gly	Ile	Gln	Gly	Pro	Van den Steen et al., 2004	18551
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly1134+Phe-peptide	P		Gly	His	Arg	Gly	Phe	Thr	Gly	Leu	Van den Steen et al., 2004	18552
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly831+Pro-peptide	P		Gly	Pro	Pro	Gly	Pro	Ala	Gly	Phe	Van den Steen et al., 2004
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly1149+Asp-peptide	P	MS	Gly	Pro	Ser	Gly	Asp	Gln	Gly	Ala	Zhen et al., 2008	22834
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly1173+Lys-peptide	P	MS	Gly	Pro	Ser	Gly	Lys	Asp	Gly	Ala	Zhen et al., 2008	22836
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly909+Ser-peptide	P	MS	Gly	Pro	Pro	Gly	Ser	Asn	Gly	Asn	Zhen et al., 2008	22902
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly1053+Val-peptide	P	MS	Gly	Ala	Ala	Gly	Val	Lys	Gly	Asp	Zhen et al., 2008	22924
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly1083+Lys-peptide	P	MS	Gly	Pro	Thr	Gly	Lys	Gln	Gly	Asp	Zhen et al., 2008	22928
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly513+Asn-peptide	P	MS	Gly	Ala	Pro	Gly	Asn	Arg	Gly	Phe	Zhen et al., 2008	22952
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly630+Leu-peptide	P	MS	Gly	Leu	Arg	Gly	Leu	Pro	Gly	Lys	Zhen et al., 2008	23031
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly651+Glu-peptide	P	MS	Gly	Pro	Ala	Gly	Glu	Arg	Gly	Glu	Zhen et al., 2008	23035
collagen alpha-1(II) chain	P02458	182-1241	peptide-Gly432+Phe-peptide	P	MS	Gly	Ala	Pro	Gly	Phe	Pro	Gly	Pro	Zhen et al., 2008	23063
collagen alpha-1(II) chain	P02458	182-1241	peptide-Lys452+Gly-peptide	P	MS	Leu	Gly	Pro	Lys	Gly	Gln	Thr	Gly	Zhen et al., 2008	23066
Collagen alpha-1(II) chain isoform 2	P02458	182-1241	peptide-Gly981+Ile-peptide	P		Gly	Gln	Arg	Gly	Ile	Val	Gly	Leu	Van den Steen et al., 2004	18549
collagen alpha-1(II) chain precursor	P02458	26-1487	peptide-Ala181+Gln-peptide	P		Asn	Phe	Ala	Ala	Gln	Met	Ala	Gly	Fukui et al., 2002	18176
collagen alpha-1(II) chain precursor	P02458	26-1487	peptide-Gln182+Met-peptide	P		Phe	Ala	Ala	Gln	Met	Ala	Gly	Gly	Fukui et al., 2002	18178
collagen alpha-1(III) chain	P02461	154-1221	peptide-Ala1129+Ile-peptide	P	MS	Gln	Gln	Gly	Ala	Ile	Gly	Ser	Pro	Zhen et al., 2008	22868
collagen alpha-1(III) chain	P02461	154-1221	peptide-Gly1149+Lys-peptide	P	MS	Gly	Pro	Pro	Gly	Lys	Asp	Gly	Thr	Zhen et al., 2008	22869
collagen alpha-1(III) chain	P02461	154-1221	peptide-Lys108+Gly-peptide	P	MS	Gln	Gly	Pro	Lys	Gly	Asp	Pro	Gly	Zhen et al., 2008	22870
collagen alpha-1(III) chain	P02461	154-1221	peptide-Gly130+Ser-peptide	P	MS	Gly	Gln	Pro	Gly	Ser	Pro	Gly	Ser	Zhen et al., 2008	22871
collagen alpha-1(III) chain	P02461	154-1221	peptide-Gly198+Tyr-peptide	P	MS	Gly	Ser	Pro	Gly	Tyr	Gln	Gly	Pro	Zhen et al., 2008	22872
collagen alpha-1(III) chain	P02461	154-1221	peptide-Gly219+Ala-peptide	P	MS	Gly	Pro	Pro	Gly	Ala	Ile	Gly	Pro	Zhen et al., 2008	22873
collagen alpha-1(III) chain	P02461	154-1221	peptide-Gly840+Val-peptide	P	MS	Gly	Pro	Pro	Gly	Val	Ala	Gly	Pro	Zhen et al., 2008	22874
collagen alpha-1(III) chain	P02461	154-1221	peptide-Gly858+Val-peptide	P	MS	Gly	Pro	Gln	Gly	Val	Lys	Gly	Glu	Zhen et al., 2008	22875
collagen alpha-1(III) chain	P02461	154-1221	peptide-Gly1125+Gln-peptide	P	MS	Gly	Pro	Ala	Gly	Gln	Gln	Gly	Ala	Zhen et al., 2008	22876
collagen alpha-1(III) chain	P02461	154-1221	peptide-Gly693+Leu-peptide	P	MS	Gly	Ala	Pro	Gly	Leu	Arg	Gly	Gly	Zhen et al., 2008	22877
collagen alpha-1(III) chain	P02461	154-1221	peptide-Gly717+Ala-peptide	P	MS	Gly	Pro	Pro	Gly	Ala	Ala	Gly	Thr	Zhen et al., 2008	22878
collagen alpha-1(III) chain	P02461	154-1221	peptide-Gly609+Lys-peptide	P	MS	Gly	Pro	Pro	Gly	Lys	Asn	Gly	Glu	Zhen et al., 2008	22879
collagen alpha-1(III) chain	P02461	154-1221	peptide-Gly639+Leu-peptide	P	MS	Gly	Pro	Gln	Gly	Leu	Gln	Gly	Leu	Zhen et al., 2008	22880
collagen alpha-1(III) chain	P02461	154-1221	peptide-Gly741+Asp-peptide	P	MS	Gly	Pro	Lys	Gly	Asp	Lys	Gly	Glu	Zhen et al., 2008	22884
collagen alpha-1(III) chain	P02461	154-1221	peptide-Gly774+Gln-peptide	P	MS	Gly	Pro	Ala	Gly	Gln	Pro	Gly	Asp	Zhen et al., 2008	22885
Collagen alpha-1(III) chain	P08121	155-1219	peptide-Gly662+Glu-peptide	N	MS	Gly	Pro	Lys	Gly	Glu	Val	Gly	Ala	Prudova et al., 2010
collagen alpha-1(IV) chain precursor	P02462	173-1669	peptide-Gly408+Arg-peptide	P		Gly	Pro	Ser	Gly	Arg	Asp	Gly	Leu	Kridel et al., 2001
collagen alpha-1(IV) chain precursor	P02462	173-1669	peptide-Gly332+Ile-peptide	P		Gly	Pro	Pro	Gly	Ile	Val	Ile	Gly	Kridel et al., 2001
collagen alpha-1(V) chain	P20908	38-1605	peptide-Gly439+Val-peptide	P		Gly	Pro	Pro	Gly	Val	Val	Gly	Pro	Niyibizi et al., 1994	18225
collagen alpha-1(XVIII) chain	P39060	24-1754	peptide-Pro1530+Trp-peptide	P		Thr	Ala	Arg	Pro	Trp	Arg	Ala	Asp	Heljasvaara et al., 2005	18955
collagen alpha-1(XVIII) chain	P39060	24-1754	peptide-Pro1548+Tyr-peptide	P		Glu	Pro	Gln	Pro	Tyr	Pro	Gly	Ala	Heljasvaara et al., 2005	18956
Collagen alpha-2(I) chain	Q01149	86-1108	peptide-Gly808+Ile-peptide	N	MS	Gly	Pro	Ser	Gly	Ile	Ala	Gly	Pro	Prudova et al., 2010
collagen alpha-2(V) chain	P05997	27-1229	peptide-Gly942+Leu-peptide	P		Gly	Pro	Pro	Gly	Leu	Arg	Gly	Asp	Kridel et al., 2001	18466
complement C1q subcomponent subunit A	P02745	23-245	peptide-Gly92+Ala-peptide	N		Gly	Pro	Leu	Gly	Ala	Arg	Gly	Ile	Ruiz et al., 1999	19783
complement C1q subcomponent subunit C	P02747	29-245	peptide-Gly94+Met-peptide	N		Gly	Pro	Pro	Gly	Met	Pro	Gly	Val	Ruiz et al., 1999	19784
crystallin, beta B1	Q9WVJ5	2-250	peptide-Ala47+Lys-peptide	P	NT	Arg	Pro	Ala	Ala	Lys	Val	Gly	Asp	Descamps et al., 2005	18467
Cystatin-C	P21460	21-140	peptide-Met29+Leu-peptide	N	MS	Gly	Pro	Arg	Met	Leu	Gly	Ala	Pro	Prudova et al., 2010
Dabcyl-Leu-Ala-Gln-Ala-HPh-Arg-Ser-Lys(Fam)-NH2			Dabcyl-Leu-Ala-Gln-Ala+HPh-Arg-Ser-Lys(Fam)-NH2	S		Leu	Ala	Gln	Ala	HPh	Arg	Ser	LyN	Moss & Rasmussen, 2007
Dabcyl-Pro-Arg-Ala-Ala-Ala-hPhe-Thr-Ser-Pro-Lys(FAM)-NH2			Dabcyl-Pro-Arg-Ala-Ala-Ala+homoPhe-Thr-Ser-Pro-Lys(FAM)-NH2	S		Arg	Ala	Ala	Ala	HPh	Thr	Ser	Pro	Moss et al., 2016
Dabcyl-Pro-Cha-Gly-Cys(Me)-His-Ala-Lys(Fam)-NH2			Dabcyl-Pro-Cha-Gly+Cys(Me)-His-Ala-Lys(Fam)-NH2	S		Dab	Pro	Cha	Gly	CyM	His	Ala	LyN	Moss & Rasmussen, 2007
Dabcyl-Ser-Pro-Leu-Ala-Gln-Ala-Val-Arg-Ser-Ser-Lys(FAM)-NH2			Dabcyl-Ser-Pro-Leu-Ala-Gln-Ala+Val-Arg-Ser-Ser-Lys(FAM)-NH2	S		Leu	Ala	Gln	Ala	Val	Arg	Ser	Ser	Moss et al., 2016
dentin sialophosphoprotein	P97399	18-451	peptide-Arg127+Gly-peptide	P	MS	Val	His	Ala	Arg	Gly	Glu	Asn	Ser	Yuan et al., 2017
dentin sialophosphoprotein	P97399	18-451	peptide-Arg287+Gly-peptide	P	MS	Thr	Asp	His	Arg	Gly	Gln	Ser	Ser	Yuan et al., 2017
dentin sialophosphoprotein	P97399	18-451	peptide-Lys388+Asp-peptide	P	MS	Ser	Gly	Ser	Lys	Asp	Ser	Asn	Gly	Yuan et al., 2017
DNA polymerase epsilon subunit 3	Q9JKP7	2-145	peptide-Pro84+Leu-peptide	N	MS	Phe	Ile	Thr	Pro	Leu	Lys	Glu	Ala	Prudova et al., 2010
elastin	P15502	27-786	Gly-Gly+Pro-peptide	P	MS	-	Gly	Gly	Val	Pro	Gly	Ala	Ile	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ile33+Pro-peptide	P	MS	Pro	Gly	Ala	Ile	Pro	Gly	Gly	Val	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly35+Gly-peptide	P	MS	Ala	Ile	Pro	Gly	Gly	Val	Pro	Gly	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly39+Gly-peptide	P	MS	Gly	Val	Pro	Gly	Gly	Val	Phe	Tyr	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly40+Val-peptide	P	MS	Val	Pro	Gly	Gly	Val	Phe	Tyr	Pro	Heinz et al., 2010
elastin	P15502	27-786	peptide-Tyr43+Pro-peptide	P	MS	Gly	Val	Phe	Tyr	Pro	Gly	Ala	Gly	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ala46+Gly-peptide	P	MS	Tyr	Pro	Gly	Ala	Gly	Leu	Gly	Ala	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly47+Leu-peptide	P	MS	Pro	Gly	Ala	Gly	Leu	Gly	Ala	Leu	Heinz et al., 2010
elastin	P15502	27-786	peptide-Leu48+Gly-peptide	P	MS	Gly	Ala	Gly	Leu	Gly	Ala	Leu	Gly	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly49+Ala-peptide	P	MS	Ala	Gly	Leu	Gly	Ala	Leu	Gly	Gly	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ala50+Leu-peptide	P	MS	Gly	Leu	Gly	Ala	Leu	Gly	Gly	Gly	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly69+Leu-peptide	P	MS	Val	Pro	Gly	Gly	Leu	Ala	Gly	Ala	Heinz et al., 2010
elastin	P15502	27-786	peptide-Val92+Pro-peptide	P	MS	Gly	Ala	Leu	Val	Pro	Gly	Gly	Val	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ala102+Tyr-peptide	P	MS	Ala	Ala	Ala	Ala	Tyr	Lys	Ala	Ala	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly122+Val-peptide	P	MS	Gly	Gly	Leu	Gly	Val	Ser	Ala	Gly	Heinz et al., 2010
elastin	P15502	27-786	peptide-Val123+Ser-peptide	P	MS	Gly	Leu	Gly	Val	Ser	Ala	Gly	Ala	Heinz et al., 2010
elastin	P15502	27-786	peptide-Pro207+Ile-peptide	P	MS	Leu	Gly	Tyr	Pro	Ile	Lys	Ala	Pro	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ile208+Lys-peptide	P	MS	Gly	Tyr	Pro	Ile	Lys	Ala	Pro	Lys	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly216+Tyr-peptide	P	MS	Leu	Pro	Gly	Gly	Tyr	Gly	Leu	Pro	Heinz et al., 2010
elastin	P15502	27-786	peptide-Pro220+Tyr-peptide	P	MS	Tyr	Gly	Leu	Pro	Tyr	Thr	Thr	Gly	Heinz et al., 2010
elastin	P15502	27-786	peptide-Tyr221+Thr-peptide	P	MS	Gly	Leu	Pro	Tyr	Thr	Thr	Gly	Lys	Heinz et al., 2010
elastin	P15502	27-786	peptide-Thr222+Thr-peptide	P	MS	Leu	Pro	Tyr	Thr	Thr	Gly	Lys	Leu	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly229+Tyr-peptide	P	MS	Leu	Pro	Tyr	Gly	Tyr	Gly	Pro	Gly	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly234+Val-peptide	P	MS	Gly	Pro	Gly	Gly	Val	Ala	Gly	Ala	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly240+Lys-peptide	P	MS	Gly	Ala	Ala	Gly	Lys	Ala	Gly	Tyr	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ala254+Ala-peptide	P	MS	Gly	Pro	Gln	Ala	Ala	Ala	Ala	Ala	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ala256+Ala-peptide	P	MS	Gln	Ala	Ala	Ala	Ala	Ala	Ala	Ala	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ala259+Ala-peptide	P	MS	Ala	Ala	Ala	Ala	Ala	Lys	Ala	Ala	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ala260+Lys-peptide	P	MS	Ala	Ala	Ala	Ala	Lys	Ala	Ala	Ala	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ala264+Lys-peptide	P	MS	Lys	Ala	Ala	Ala	Lys	Phe	Gly	Ala	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ala441+Gln-peptide	P	MS	Ser	Pro	Glu	Ala	Gln	Ala	Ala	Ala	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ala488+Ala-peptide	P	MS	Thr	Pro	Ala	Ala	Ala	Ala	Ala	Lys	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ala490+Ala-peptide	P	MS	Ala	Ala	Ala	Ala	Ala	Lys	Ala	Ala	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ala495+Lys-peptide	P	MS	Lys	Ala	Ala	Ala	Lys	Ala	Ala	Gln	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ala498+Gln-peptide	P	MS	Ala	Lys	Ala	Ala	Gln	Phe	Gly	Leu	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly552+Val-peptide	P	MS	Gly	Pro	Gly	Gly	Val	Ala	Ala	Ala	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ala556+Ala-peptide	P	MS	Val	Ala	Ala	Ala	Ala	Lys	Ser	Ala	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ala557+Lys-peptide	P	MS	Ala	Ala	Ala	Ala	Lys	Ser	Ala	Ala	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ala567+Gln-peptide	P	MS	Ala	Ala	Lys	Ala	Gln	Leu	Arg	Ala	Heinz et al., 2010
elastin	P15502	27-786	peptide-Arg570+Ala-peptide	P	MS	Ala	Gln	Leu	Arg	Ala	Ala	Ala	Gly	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ala571+Ala-peptide	P	MS	Gln	Leu	Arg	Ala	Ala	Ala	Gly	Leu	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly574+Leu-peptide	P	MS	Ala	Ala	Ala	Gly	Leu	Gly	Ala	Gly	Heinz et al., 2010
elastin	P15502	27-786	peptide-Val606+Pro-peptide	N	MS	Gly	Ala	Gly	Val	Pro	Gly	Phe	Gly	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ala648+Leu-peptide	P	MS	Val	Pro	Gly	Ala	Leu	Ala	Ala	Ala	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ala655+Lys-peptide	P	MS	Ala	Lys	Ala	Ala	Lys	Tyr	Gly	Ala	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly663+Val-peptide	P	MS	Ala	Val	Pro	Gly	Val	Leu	Gly	Gly	Heinz et al., 2010
elastin	P15502	27-786	peptide-Val664+Leu-peptide	P	MS	Val	Pro	Gly	Val	Leu	Gly	Gly	Leu	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly666+Gly-peptide	P	MS	Gly	Val	Leu	Gly	Gly	Leu	Gly	Ala	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly667+Leu-peptide	P	MS	Val	Leu	Gly	Gly	Leu	Gly	Ala	Leu	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly669+Ala-peptide	P	MS	Gly	Gly	Leu	Gly	Ala	Leu	Gly	Gly	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ala670+Leu-peptide	P	MS	Gly	Leu	Gly	Ala	Leu	Gly	Gly	Val	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly679+Val-peptide	P	MS	Ile	Pro	Gly	Gly	Val	Val	Gly	Ala	Heinz et al., 2010
elastin	P15502	27-786	peptide-Val681+Gly-peptide	P	MS	Gly	Gly	Val	Val	Gly	Ala	Gly	Pro	Heinz et al., 2010
elastin	P15502	27-786	peptide-Ala687+Ala-peptide	P	MS	Gly	Pro	Ala	Ala	Ala	Ala	Ala	Ala	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly702+Leu-peptide	P	MS	Ala	Gln	Phe	Gly	Leu	Val	Gly	Ala	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly708+Leu-peptide	P	MS	Gly	Ala	Ala	Gly	Leu	Gly	Gly	Leu	Heinz et al., 2010
elastin	P15502	27-786	peptide-Val714+Gly-peptide	P	MS	Gly	Leu	Gly	Val	Gly	Gly	Leu	Gly	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly716+Leu-peptide	P	MS	Gly	Val	Gly	Gly	Leu	Gly	Val	Pro	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly724+Leu-peptide	P	MS	Gly	Val	Gly	Gly	Leu	Gly	Gly	Ile	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly743+Leu-peptide	P	MS	Gly	Ala	Ala	Gly	Leu	Gly	Gly	Val	Heinz et al., 2010
elastin	P15502	27-786	peptide-Leu744+Gly-peptide	P	MS	Ala	Ala	Gly	Leu	Gly	Gly	Val	Leu	Heinz et al., 2010
elastin	P15502	27-786	peptide-Pro763+Gly-peptide	P	MS	Ala	Ala	Arg	Pro	Gly	Phe	Gly	Leu	Heinz et al., 2010
elastin	P15502	27-786	peptide-Gly764+Phe-peptide	P	MS	Ala	Arg	Pro	Gly	Phe	Gly	Leu	Ser	Heinz et al., 2010
elastin, isoform 2	P15502-2	27-724	peptide-Val606+Pro-peptide	P	MS	Gly	Ala	Gly	Val	Pro	Gly	Phe	Gly	Heinz et al., 2010
elastin, isoform 2	P15502-2	27-724	peptide-Ala687+Ala-peptide	P	MS	Gly	Pro	Ala	Ala	Ala	Ala	Ala	Ala	Heinz et al., 2010
Elongation factor 1-alpha 1	P10126	1-462	peptide-Phe393+Leu-peptide	N	MS	Gly	Pro	Lys	Phe	Leu	Lys	Ser	Gly	Prudova et al., 2010
fibrillin-1	P35555	28-2871	peptide-Asn448+Val-peptide	P		Leu	Pro	Val	Asn	Val	Thr	Asp	Tyr	Hindson et al., 1999	18422
fibrillin-2	P35556	29-2911	peptide-Leu488+Thr-peptide	P		Ile	Thr	Gly	Leu	Thr	Ile	Leu	Asn	Hindson et al., 1999	18424
fibronectin	P02751	32-2386	peptide-Glu613+Val-peptide	P	MS	Gly	Pro	Val	Glu	Val	Phe	Ile	Thr	Zhen et al., 2008	22495
fibronectin	P02751	32-2386	peptide-Gln629+Trp-peptide	P	MS	His	Pro	Ile	Gln	Trp	Asn	Ala	Pro	Zhen et al., 2008	22502
fibronectin	P02751	32-2386	peptide-Pro606+Ser-peptide	P	MS	Gln	Thr	Tyr	Pro	Ser	Ser	Ser	Gly	Zhen et al., 2008	22542
fibronectin	P02751	32-2386	peptide-Ala44+Val-peptide	P	MS	Ser	Pro	Val	Ala	Val	Ser	Gln	Ser	Doucet & Overall, 2010
fibronectin	P02751	32-2386	peptide-Pro635+Ser-peptide	P	MS	Ala	Pro	Gln	Pro	Ser	His	Ile	Ser	Doucet & Overall, 2010
fibronectin	P02751	32-2386	peptide-Thr667+Ile-peptide	P	MS	Asn	Ser	Tyr	Thr	Ile	Lys	Gly	Leu	Doucet & Overall, 2010
fibronectin	P02751	32-2386	peptide-Asn1179+Leu-peptide	P	MS	Pro	Pro	Thr	Asn	Leu	His	Leu	Glu	Doucet & Overall, 2010
fibronectin	P02751	32-2386	peptide-His1181+Leu-peptide	P	MS	Thr	Asn	Leu	His	Leu	Glu	Ala	Asn	Doucet & Overall, 2010
fibronectin	P02751	32-2386	peptide-Thr1249+Val-peptide	P	MS	Ser	Val	Tyr	Thr	Val	Lys	Asp	Asp	Doucet & Overall, 2010
fibronectin	P02751	32-2386	peptide-Thr1460+Pro-peptide	P	MS	Val	Ala	Ala	Thr	Pro	Thr	Ser	Leu	Doucet & Overall, 2010
fibronectin	P02751	32-2386	peptide-Gln1547+Met-peptide	P	MS	Lys	Pro	Ser	Gln	Met	Gln	Val	Thr	Doucet & Overall, 2010
fibronectin	P02751	32-2386	peptide-Thr1961+Gly-peptide	P	MS	Ala	Thr	Ile	Thr	Gly	Leu	Glu	Pro	Doucet & Overall, 2010
fibronectin	P02751	32-2386	peptide-Gln2147+Phe-peptide	P	MS	Glu	Pro	Leu	Gln	Phe	Arg	Val	Pro	Doucet & Overall, 2010
fibronectin	P02751	32-2386	peptide-Asn2169+Val-peptide	P	MS	Ala	Thr	Tyr	Asn	Val	Ile	Val	Glu	Doucet & Overall, 2010
fibronectin	P02751	32-2386	peptide-Gly2197+Leu-peptide	P	MS	Val	Asn	Glu	Gly	Leu	Asn	Gln	Pro	Doucet & Overall, 2010
fibronectin	P02751	32-2386	peptide-His2214+Tyr-peptide	P	MS	Thr	Val	Ser	His	Tyr	Ala	Val	Gly	Doucet & Overall, 2010
Filamin-A	Q8BTM8	2-2647	peptide-Pro1058+Leu-peptide	N	MS	Ser	Pro	Phe	Pro	Leu	Glu	Ala	Val	Prudova et al., 2010
Fm-Phe-Gly-Pro-Leu-Gly-Leu-Arg-Ser-Lys			Fm-Phe-Gly-Pro-Leu-Gly+Leu-Arg-Ser-Lys	S		Gly	Pro	Leu	Gly	Leu	Arg	Ser	Lys	Huang et al., 2013
Fm-Phe-Gly-Pro-Leu-Gly-Leu-Arg-Ser-Lys			Fm-Phe-Gly-Pro-Leu+Gly-Leu-Arg-Ser-Lys	S		Phe	Gly	Pro	Leu	Gly	Leu	Arg	Ser	Huang et al., 2013
Fm-Phe-Gly-Pro-Leu-Ser-Leu-Arg-Ser-Lys			Fm-Phe-Gly-Pro-Leu+Ser-Leu-Arg-Ser-Lys	S		Phe	Gly	Pro	Leu	Ser	Leu	Arg	Ser	Huang et al., 2013
Fm-Phe-Phe-Gly-Pro-Leu-Gly-Leu-Arg-Ser-Lys			Fm-Phe-Phe-Gly-Pro-Leu+Gly-Leu-Arg-Ser-Lys	S		Phe	Gly	Pro	Leu	Gly	Leu	Arg	Ser	Huang et al., 2013
Fm-Pro-Leu-Gly-Leu-Arg-Ser-Lys			Fm-Pro-Leu-Gly-Leu+Arg-Ser-Lys	S		Pro	Leu	Gly	Leu	Arg	Ser	Lys	-	Huang et al., 2013
Fm-Pro-Leu-Gly-Leu-Arg-Ser-Lys			Fm-Pro-Leu-Gly+Leu-Arg-Ser-Lys	S		Fm	Pro	Leu	Gly	Leu	Arg	Ser	Lys	Huang et al., 2013
Fm-Pro-Leu-Ser-Leu-Arg-Ser-Lys			Fm-Pro-Leu+Ser-Leu-Arg-Ser-Lys	S		'-'	Fm	Pro	Leu	Ser	Leu	Arg	Ser	Huang et al., 2013
Fm-Pro-Leu-Ser-Leu-Arg-Ser-Lys			Fm-Pro-Leu-Ser+Leu-Arg-Ser-Lys	S		Fm	Pro	Leu	Ser	Leu	Arg	Ser	Lys	Huang et al., 2013
Galectin-1	P16045	2-135	Ala-Cys-Gly4+Leu-peptide	N	MS	-	Ala	Cys	Gly	Leu	Val	Ala	Ser	Prudova et al., 2010
galectin-3	P17931	2-250	peptide-Ala62+Tyr-peptide	P		Pro	Pro	Gly	Ala	Tyr	His	Gly	Ala	Ochieng et al., 1994	18104
glia-derived nexin	P07093	20-398	peptide-Ile58+Ala-peptide	P	MU	Pro	His	Gly	Ile	Ala	Ser	Val	Leu	Xu et al., 2010
glia-derived nexin	P07093	20-398	peptide-Ile107+Val-peptide	P	MU	Asn	Lys	Asp	Ile	Val	Thr	Val	Ala	Xu et al., 2010
glia-derived nexin	P07093	20-398	peptide-Pro368+Pro-peptide	P	MU	Arg	Ser	Ser	Pro	Pro	Trp	Phe	Ile	Xu et al., 2010
Glu(EDANS)-Pro-Leu-Ala-Gln-Ala-Val-Arg-Ser-Ser(TF)-Ser-Lys(DABCYL)			Glu(EDANS)-Pro-Leu-Ala-Gln-Ala+Val-Arg-Ser-Ser(TF)-Ser-Lys(DABCYL)	S		Leu	Ala	Gln	Ala	Val	Arg	Ser	Ser	Minond et al., 2012
Glu(EDANS)-Pro-Leu-Ala-Gln-Ala-Val-Arg-Ser-Ser(TF)-Ser-Lys(DABCYL)			Glu(EDANS)-Pro-Leu-Ala-Gln+Ala-Val-Arg-Ser-Ser(TF)-Ser-Lys(DABCYL)	S		Pro	Leu	Ala	Gln	Ala	Val	Arg	Ser	Minond et al., 2012
Glu(EDANS)-Pro-Leu-Ala-Gln-Ala-Val-Arg-Ser-Ser-Ser-Lys(DABCYL)			Glu(EDANS)-Pro-Leu-Ala-Gln-Ala+Val-Arg-Ser-Ser(TF)-Ser-Lys(DABCYL)	S		Leu	Ala	Gln	Ala	Val	Arg	Ser	Ser	Minond et al., 2012
Glu(EDANS)-Pro-Leu-Ala-Gln-Ala-Val-Arg-Ser-Ser-Ser-Lys(DABCYL)			Glu(EDANS)-Pro-Leu-Ala+Gln-Ala-Val-Arg-Ser-Ser(TF)-Ser-Lys(DABCYL)	S		Glu	Pro	Leu	Ala	Gln	Ala	Val	Arg	Minond et al., 2012
Gly-Met-Fc			Gly+Met-Fc	S		-	-	-	Gly	Met	Fc	-	-	Nisiewicz et al., 2021
Gly-Pro-Gln-Gly-Ile-Phe-Gly-Gln			Gly-Pro-Gln-Gly+Ile-Phe-Gly-Gln	N		Gly	Pro	Gln	Gly	Ile	Phe	Gly	Gln	Bannikov et al., 2004
growth-regulated protein alpha precursor	P09341	35-107	peptide-Glu40+Leu-peptide	P		Val	Ala	Thr	Glu	Leu	Arg	Cys	Gln	Van den Steen et al., 2003
growth-regulated protein alpha precursor	P09341	35-107	peptide-Asn61+Val-peptide	P		Gln	Ser	Val	Asn	Val	Lys	Ser	Pro	Van den Steen et al., 2003
Heat shock 70 kDa protein 4	Q61316	1-841	peptide-Glu678+Leu-peptide	N	MS	Lys	Leu	Ala	Glu	Leu	Lys	Ser	Leu	Prudova et al., 2010
Heterogeneous nuclear ribonucleoprotein D-like	Q9Z130	1-301	peptide-Gly35+Leu-peptide	N	MS	Phe	Ile	Gly	Gly	Leu	Ser	Trp	Asp	Prudova et al., 2010
histone H3.3	P84243	1-136	peptide-Lys19+Gln-peptide	P	NT	Ala	Pro	Arg	Lys	Gln	Leu	Ala	Thr	Kim et al., 2016
hyaluronan and proteoglycan link protein 1	P10915	16-354	peptide-His31+Ile-peptide	P		Arg	Ala	Ile	His	Ile	Gln	Ala	Glu	Nguyen et al., 1993	3239
insulin	P01308	25-54; 90-110	peptide-Gly47+Phe-peptide	P		Gly	Glu	Arg	Gly	Phe	Phe	Tyr	Thr	Deschamps et al., 2002	18578
insulin	P01308	25-54,90-110	peptide-Ala38+Leu-peptide	P		Leu	Val	Glu	Ala	Leu	Tyr	Leu	Val	Deschamps et al., 2002	18579
insulin	P01308	25-54; 90-110	peptide-Tyr40+Leu-peptide	P		Glu	Ala	Leu	Tyr	Leu	Val	Cys	Gly	Deschamps et al., 2002	18580
insulin	P01308	25-54,90-110	peptide-His34+Leu-peptide	P		Cys	Gly	Ser	His	Leu	Val	Glu	Ala	Deschamps et al., 2002	18581
insulin	P01308	25-54; 90-110	peptide-Ser101+Leu-peptide	P		Ser	Ile	Cys	Ser	Leu	Tyr	Gln	Leu	Deschamps et al., 2002	18582
insulin	P01308	25-54; 90-110	peptide-Gln104+Leu-peptide	P		Ser	Leu	Tyr	Gln	Leu	Glu	Asn	Tyr	Deschamps et al., 2002	18583
insulin	P01308	25-54; 90-110	peptide-Gly44+Glu-peptide	P		Leu	Val	Cys	Gly	Glu	Arg	Gly	Phe	Deschamps et al., 2002	18584
insulin	P01308	25-54; 90-110	peptide-Glu106+Asn-peptide	P		Gln	Leu	Glu	Asn	Tyr	Cys	Asn	-	Deschamps et al., 2002	18585
insulin	P01308	25-54,90-110	peptide-Asn27+Gln-peptide	P		Ala	Phe	Val	Asn	Gln	His	Leu	Cys	Deschamps et al., 2002	18586
insulin	P01308	25-54,90-110	peptide-His29+Leu-peptide	P		Val	Asn	Gln	His	Leu	Cys	Gly	Ser	Deschamps et al., 2002	18587
insulin-like growth factor-binding protein 1	A4D2F4	26-259	peptide-Lys170+Lys-peptide	P		Thr	Asn	Ile	Lys	Lys	Trp	Lys	Glu	Coppock et al., 2004	18530
Insulin-like growth factor-binding protein 4	P47879	22-254	peptide-Pro166+Gln-peptide	N	MS	Arg	Pro	Val	Pro	Gln	Gly	Ser	Cys	Prudova et al., 2010
Integrin beta-2	P11835	651-710	peptide-Ala705+Ile-peptide	N	MS	Asn	Val	Ala	Ala	Ile	Val	Gly	Gly	Vaisar et al., 2009
interferon beta precursor	P01574	22-187	peptide-Asn107+Leu-peptide	P		Ile	Val	Glu	Asn	Leu	Leu	Ala	Asn	Nelissen et al., 2003	16533
interferon beta precursor	P01574	22-187	peptide-Asn25+Leu-peptide	P		Met	Ser	Tyr	Asn	Leu	Leu	Gly	Phe	Nelissen et al., 2003
interferon beta precursor	P01574	22-187	peptide-Phe29+Leu-peptide	P		Leu	Leu	Gly	Phe	Leu	Gln	Arg	Ser	Nelissen et al., 2003
interferon beta precursor	P01574	22-187	peptide-Leu30+Gln-peptide	P		Leu	Gly	Phe	Leu	Gln	Arg	Ser	Ser	Nelissen et al., 2003
interferon beta precursor	P01574	22-187	peptide-His114+Gln-peptide	P		Asn	Val	Tyr	His	Gln	Ile	Asn	His	Nelissen et al., 2003
interleukin-8	P10145	21-99	peptide-Ser28+Ala-peptide	N		Leu	Pro	Arg	Ser	Ala	Lys	Glu	Leu	Van den Steen et al., 2003	16543
laminin subunit alpha-1	P19137	25-3084	peptide-Gly2583+Ser-peptide	P	MS	Ala	Pro	Thr	Gly	Ser	Tyr	Ser	Asp	Doucet & Overall, 2010
laminin subunit beta-1	P02469	22-1786	peptide-Val1557+Glu-peptide	P	MS	Leu	Ser	Gln	Val	Glu	Val	Ile	Leu	Doucet & Overall, 2010
LPS-induced CXC chemokine	Q8K3I3	41-132	peptide-Ser44+Val-peptide	P		Ala	Pro	Ser	Ser	Val	Ile	Ala	Ala	Tester et al., 2007
mannose-binding protein A	P19999	18-238	peptide-Asn97+Met-peptide	P		Lys	Leu	Ala	Asn	Met	Glu	Ala	Glu	Butler et al., 2002	18569
mannose-binding protein A	P19999	18-238	peptide-Gly62+Lys-peptide	P		Gly	Pro	Pro	Gly	Lys	Leu	Gly	Pro	Butler et al., 2002	18566
mannose-binding protein A	P19999	18-238	peptide-Gly80+Gln-peptide	P		Gly	Pro	Lys	Gly	Gln	Lys	Gly	Asp	Butler et al., 2002	18563
mannose-binding protein C	P11226	21-248	peptide-Gly74+Lys-peptide	P		Gly	Pro	Pro	Gly	Lys	Leu	Gly	Pro	Butler et al., 2002	18553
mannose-binding protein C	P11226	21-248	peptide-Gly92+Gln-peptide	N		Gly	Pro	Lys	Gly	Gln	Lys	Gly	Asp	Butler et al., 2002	18554
matrix metallopeptidase-9	P14780	20-707	peptide-Ala93+Met-peptide	P		Thr	Leu	Lys	Ala	Met	Arg	Thr	Pro	Sang et al., 1995	21336
matrix metallopeptidase-9	P14780	20-707	peptide-Asp34+Leu-peptide	P		Phe	Pro	Gly	Asp	Leu	Arg	Thr	Asn	Geurts et al., 2008	20251
matrix metallopeptidase-9	P14780	20-707	peptide-Leu71+Leu-peptide	P		Gly	Pro	Ala	Leu	Leu	Leu	Leu	Gln	Geurts et al., 2008	20252
matrix metallopeptidase-9	P14780	20-707	peptide-Pro81+Glu-peptide	P		Leu	Ser	Leu	Pro	Glu	Thr	Gly	Glu	Geurts et al., 2008	20253
matrix metallopeptidase-9	P14780	20-707	peptide-Leu28+Val-peptide	P	NT	Gln	Ser	Thr	Leu	Val	Leu	Phe	Pro	Ries et al., 2007	21016
matrix metallopeptidase-9	P14780	20-707	peptide-Glu59+Met-peptide	P		Arg	Val	Ala	Glu	Met	Arg	Gly	Glu	Fridman et al., 1995	21337
matrix metallopeptidase-9 precursor	P14780	1-707	peptide-Leu72+Leu-peptide	P		Pro	Ala	Leu	Leu	Leu	Leu	Gln	Lys	Sang et al., 1995	21338
matrix metalloproteinase-9	P14780	107-707	peptide-Ala135+Val-peptide	P	MS	Leu	Pro	Arg	Ala	Val	Ile	Asp	Asp	Doucet & Overall, 2010
matrix metalloproteinase-9	P14780	107-707	peptide-Ala146+Leu-peptide	P	MS	Arg	Ala	Phe	Ala	Leu	Trp	Ser	Ala	Doucet & Overall, 2010
matrix metalloproteinase-9	P14780	107-707	peptide-Gly197+Ile-peptide	P	MS	Pro	Gly	Pro	Gly	Ile	Gln	Gly	Asp	Doucet & Overall, 2010
matrix metalloproteinase-9	P14780	107-707	peptide-Lys324+Leu-peptide	P	MS	Asp	Arg	Asp	Lys	Leu	Phe	Gly	Phe	Doucet & Overall, 2010
matrix metalloproteinase-9	P14780	107-707	peptide-Ala417+Leu-peptide	P	MS	Val	Pro	Glu	Ala	Leu	Met	Tyr	Pro	Doucet & Overall, 2010
matrix metalloproteinase-9	P14780	107-707	peptide-Leu555+Ile-peptide	P	MS	Gly	Pro	Phe	Leu	Ile	Ala	Asp	Lys	Doucet & Overall, 2010
Mca-Pro-Cha-Gly-Nva-His-Ala-Dpa-NH2			Mca-Pro-Cha-Gly+Nva-His-Ala-Dpa-NH2	S		Mca	Pro	Cha	Gly	nVa	His	Ala	Dpa
Mca-Pro-Leu-Gly-Leu-Dpa-Ala-Arg-NH2			Mca-Pro-Leu-Gly+Leu-Dpa-Ala-Arg-NH2	S		Mca	Pro	Leu	Gly	Leu	Dpa	Ala	Arg	Nie & Pei, 2004
metastasis-suppressor KiSS-1	Q15726	20-145	peptide-Gly118+Leu-peptide	P		Asn	Ser	Phe	Gly	Leu	Arg	Phe	Gly	Takino et al., 2003	16544
myelin basic protein	P02686	1-304	peptide-Ser111+Leu-peptide	P		Arg	Gly	Leu	Ser	Leu	Ser	Arg	Phe	Proost et al., 1993	18477
myelin basic protein	P02686	1-304	peptide-Phe91+Lys-peptide	P		Val	His	Phe	Phe	Lys	Asn	Ile	Val	Proost et al., 1993	25668
myelin basic protein	P02686	1-304	peptide-Phe248+Ser-peptide	P		Leu	Ser	Arg	Phe	Ser	Trp	Gly	Ala	Proost et al., 1993
myelin basic protein	P04370	1-190	peptide-Lys34+Leu-peptide	P	MS	Ser	Val	Gly	Lys	Leu	Ser	Gln	Thr	Shiryaev et al., 2009
myelin basic protein	P04370	1-190	peptide-Asn75+Asn-peptide	P	MS	Asp	Pro	Lys	Asn	Asn	Trp	Gln	Gly	Shiryaev et al., 2009
myelin basic protein	P04370	1-190	peptide-Asn87+Arg-peptide	P	MS	Asp	Pro	Gly	Asn	Arg	Pro	His	Leu	Shiryaev et al., 2009
myelin basic protein	P04370	1-190	peptide-Thr119+Ile-peptide	P	MS	Glu	Leu	Gln	Thr	Ile	Gln	Glu	Asp	Shiryaev et al., 2009
myelin basic protein	P04370	1-190	peptide-Tyr146+Leu-peptide	P	MS	Arg	Ser	Lys	Tyr	Leu	Ala	Thr	Ala	Shiryaev et al., 2009
myelin basic protein	P04370	1-190	peptide-His164+Arg-peptide	P	MS	Leu	Pro	Arg	His	Arg	Asp	Thr	Gly	Shiryaev et al., 2009
myelin basic protein isoform 1	P02686	135-304	peptide-Asp123+Tyr-peptide	P		Arg	Ala	Ser	Asp	Tyr	Lys	Ser	Ala	Proost et al., 1993	25669
myelin basic protein isoform 1	P02686	135-304	peptide-Tyr15+Leu-peptide	P	MS	Gly	Ser	Lys	Tyr	Leu	Ala	Thr	Ala	Shiryaev et al., 2009	25398
myelin basic protein isoform 1	P02686	135-304	peptide-Asn93+Ile-peptide	P	MS	Phe	Phe	Lys	Asn	Ile	Val	Thr	Pro	Shiryaev et al., 2009	25401
myelin basic protein isoform 1	P02686	135-304	peptide-Pro102+Ser-peptide	P	MS	Thr	Pro	Pro	Pro	Ser	Gln	Gly	Lys	Shiryaev et al., 2009	25403
myelin basic protein isoform 1	P02686	135-304	peptide-Lys153+Ile-peptide	P	MS	Thr	Leu	Ser	Lys	Ile	Phe	Lys	Leu	Shiryaev et al., 2009	25404
myelin basic protein isoform 1	P04370	1-246	peptide-Glu116+Leu-peptide	P	MS	Glu	Ser	Asp	Glu	Leu	Gln	Thr	Ile	Shiryaev et al., 2009	25528
myelin basic protein isoform 1	P04370	1-246	peptide-Thr119+Ile-peptide	P	MS	Glu	Leu	Gln	Thr	Ile	Gln	Glu	Asp	Shiryaev et al., 2009	25529
myelin basic protein isoform 1	P04370	1-246	peptide-Ser144+Lys-peptide	P	MS	Ser	Gln	Arg	Ser	Lys	Tyr	Leu	Ala	Shiryaev et al., 2009	25530
myelin basic protein isoform 1	P04370	1-246	peptide-Tyr146+Leu-peptide	P	MS	Arg	Ser	Lys	Tyr	Leu	Ala	Thr	Ala	Shiryaev et al., 2009	25531
myelin basic protein isoform 1	P04370	1-246	peptide-Ala150+Ser-peptide	P	MS	Leu	Ala	Thr	Ala	Ser	Thr	Met	Asp	Shiryaev et al., 2009	25532
myelin basic protein isoform 1	P04370	1-246	peptide-His158+Gly-peptide	P	MS	His	Ala	Arg	His	Gly	Phe	Leu	Pro	Shiryaev et al., 2009	25533
myelin basic protein isoform 1	P04370	1-246	peptide-Ser201+Leu-peptide	P	MS	His	Tyr	Gly	Ser	Leu	Pro	Gln	Lys	Shiryaev et al., 2009	25534
myelin basic protein isoform 1	P04370	1-246	peptide-Pro203+Gln-peptide	P	MS	Gly	Ser	Leu	Pro	Gln	Lys	Ser	Gln	Shiryaev et al., 2009	25535
myelin basic protein isoform 1	P04370	1-246	peptide-Lys205+Ser-peptide	P	MS	Leu	Pro	Gln	Lys	Ser	Gln	His	Gly	Shiryaev et al., 2009	25536
myelin basic protein isoform 1	P02686	135-304	peptide-His33+Arg-peptide	P	MS	Leu	Pro	Arg	His	Arg	Asp	Thr	Gly	Shiryaev et al., 2009	25954
myelin basic protein isoform 1	P02686	135-304	peptide-Pro97+Arg-peptide	P	MS	Ile	Val	Thr	Pro	Arg	Thr	Pro	Pro	Shiryaev et al., 2009	25956
myelin basic protein isoform 1	P02686	135-304	peptide-Phe224+Lys-peptide	P	MS	Val	His	Phe	Phe	Lys	Asn	Ile	Val	Shiryaev et al., 2009	18479
Np-Phe-Gly-Pro-Leu-Gly-Leu-Arg-Ser-Lys			Np-Phe-Gly-Pro-Leu-Gly-Leu+Arg-Ser-Lys	S		Pro	Leu	Gly	Leu	Arg	Ser	Lys	-	Huang et al., 2013
Np-Phe-Gly-Pro-Leu-Gly-Leu-Arg-Ser-Lys			Np-Phe-Gly-Pro-Leu+Gly-Leu-Arg-Ser-Lys	S		Phe	Gly	Pro	Leu	Gly	Leu	Arg	Ser	Huang et al., 2013
Np-Phe-Gly-Pro-Leu-Ser-Leu-Arg-Ser-Lys			Np-Phe-Gly-Pro-Leu+Ser-Leu-Arg-Ser-Lys	S		Phe	Gly	Pro	Leu	Ser	Leu	Arg	Ser	Huang et al., 2013
Np-Phe-Phe-Gly-Pro-Leu-Gly-Leu-Arg-Ser-Lys			Np-Phe-Phe-Gly-Pro-Leu+Gly-Leu-Arg-Ser-Lys	S		Phe	Gly	Pro	Leu	Gly	Leu	Arg	Ser	Huang et al., 2013
Np-Phe-Phe-Gly-Pro-Leu-Ser-Leu-Arg-Ser-Lys			Np-Phe-Phe-Gly-Pro-Leu+Ser-Leu-Arg-Ser-Lys	S		Phe	Gly	Pro	Leu	Ser	Leu	Arg	Ser	Huang et al., 2013
phage display peptide A10			Ser-Gly-Pro-Leu-Phe+Tyr-Ser-Val-Thr-Ala	S		Gly	Pro	Leu	Phe	Tyr	Ser	Val	Thr	Kridel et al., 2001
phage display peptide A11			Ser-Gly-Lys-Ile-Pro-Arg-Thr+Leu-Thr-Ala	S		Ile	Pro	Arg	Thr	Leu	Thr	Ala	-	Kridel et al., 2001
phage display peptide A11m1			Ser-Gly-Lys-Ile-Pro-Arg-Arg+Leu-Thr-Ala	S		Ile	Pro	Arg	Arg	Leu	Thr	Ala	-	Kridel et al., 2001
phage display peptide A11m2			Ser-Gly-Lys-Ile-Pro-Arg-Thr+Ala-Thr-Ala	S		Ile	Pro	Arg	Thr	Ala	Thr	Ala	-	Kridel et al., 2001
phage display peptide A16			Ser-Gly-Arg-Arg+Leu-Leu-Ser-Arg-Thr-Ala	S		Ser	Gly	Arg	Arg	Leu	Leu	Ser	Arg	Kridel et al., 2001
phage display peptide A18			Ser-Gly-Leu-Arg-Pro-Ala-Lys+Ser-Thr-Ala	S		Arg	Pro	Ala	Lys	Ser	Thr	Ala	-	Kridel et al., 2001
phage display peptide A19			Ser-Gly-Phe-Gly-Ser-Arg-Tyr+Leu-Thr-Ala	S		Gly	Ser	Arg	Tyr	Leu	Thr	Ala	-	Kridel et al., 2001
phage display peptide A6			Ser-Gly-Pro-Arg-Ala+Val-Ser-Thr-Thr-Ala	S		Gly	Pro	Arg	Ala	Val	Ser	Thr	Thr	Kridel et al., 2001
phage display peptide A7			Ser-Gly+Leu-Lys-Ala-Leu-Met-Ile-Thr-Ala	S		-	-	Ser	Gly	Leu	Lys	Ala	Leu	Kridel et al., 2001
phage display peptide B1			Ser-Gly-Gln-Pro-His-Tyr+Leu-Thr-Thr-Ala	S		Gln	Pro	His	Tyr	Leu	Thr	Thr	Ala	Kridel et al., 2001
phage display peptide C15			Ser-Gly-Lys-Gly-Pro-Arg-Gln+Ile-Thr-Ala	S		Gly	Pro	Arg	Gln	Ile	Thr	Ala	-	Kridel et al., 2001
Phe-Gly-Pro-Leu-Gly-Leu-Arg-Ser-Lys			Phe-Gly-Pro-Leu-Gly-Leu+Arg-Ser-Lys	S		Pro	Leu	Gly	Leu	Arg	Ser	Lys	-	Huang et al., 2013
Phe-Gly-Pro-Leu-Gly-Leu-Arg-Ser-Lys			Phe-Gly-Pro-Leu+Gly-Leu-Arg-Ser-Lys	S		Phe	Gly	Pro	Leu	Gly	Leu	Arg	Ser	Huang et al., 2013
Phe-Gly-Pro-Leu-Ser-Leu-Arg-Ser-Lys			Phe-Gly-Pro-Leu+Ser-Leu-Arg-Ser-Lys	S		Phe	Gly	Pro	Leu	Ser	Leu	Arg	Ser	Huang et al., 2013
Phe-Phe-Gly-Pro-Leu-Gly-Leu-Arg-Ser-Lys			Phe-Phe-Gly-Pro-Leu+Gly-Leu-Arg-Ser-Lys	S		Phe	Gly	Pro	Leu	Gly	Leu	Arg	Ser	Huang et al., 2013
Phe-Phe-Gly-Pro-Leu-Ser-Leu-Arg-Ser-Lys			Phe-Phe-Gly-Pro-Leu+Ser-Leu-Arg-Ser-Lys	S		Phe	Gly	Pro	Leu	Ser	Leu	Arg	Ser	Huang et al., 2013
Phosphoglycerate kinase 1	P09411	2-417	peptide-Gly341+Val-peptide	N	MS	Gly	Pro	Val	Gly	Val	Phe	Glu	Trp	Prudova et al., 2010
plasminogen	P00747	20-810	peptide-Pro465+Pro-peptide	P		Val	Ala	Pro	Pro	Pro	Val	Val	Leu	Patterson & Sang, 1997	3249
platelet basic protein	P02775	35-128	peptide-Asp56+Leu-peptide	P		Leu	Asp	Ser	Asp	Leu	Tyr	Ala	Glu	Van den Steen et al., 2003	18387
platelet basic protein	P02775	35-128	peptide-Glu60+Leu-peptide	P		Leu	Tyr	Ala	Glu	Leu	Arg	Cys	Met	Van den Steen et al., 2003	18391
platelet basic protein	P02775	35-128	peptide-Cys63+Met-peptide	P		Glu	Leu	Arg	Cys	Met	Cys	Ile	Lys	Van den Steen et al., 2003	18392
platelet basic protein	P02775	35-128	peptide-Asn76+Ile-peptide	P		His	Pro	Lys	Asn	Ile	Gln	Ser	Leu	Van den Steen et al., 2003	18390
platelet basic protein	P02775	35-128	peptide-Glu81+Val-peptide	P		Gln	Ser	Leu	Glu	Val	Ile	Gly	Lys	Van den Steen et al., 2003	18389
platelet basic protein	P02775	35-128	peptide-Thr97+Leu-peptide	P		Val	Ile	Ala	Thr	Leu	Lys	Asp	Gly	Van den Steen et al., 2003	18388
platelet basic protein	P02775	35-128	peptide-Lys115+Ile-peptide	P		Arg	Ile	Lys	Lys	Ile	Val	Gln	Lys	Van den Steen et al., 2003	18386
pregnancy zone protein	P20742	26-1482	peptide-Leu778+Ser-peptide	P		Ala	Phe	Cys	Leu	Ser	Glu	Asp	Ala	Arbelez et al., 1997	3240
Pro-Leu-Gly-Leu-Arg-Ser-Lys			Pro-Leu-Gly-Leu+Arg-Ser-Lys	S		Pro	Leu	Gly	Leu	Arg	Ser	Lys	-	Huang et al., 2013
Pro-Leu-Gly-Leu-Arg-Ser-Lys			Pro-Leu-Gly-Leu-Arg+Ser-Lys	S		Leu	Gly	Leu	Arg	Ser	Lys	-	-	Huang et al., 2013
Pro-Leu-Ser-Leu-Arg-Ser-Lys			Pro-Leu-Ser-Leu+Arg-Ser-Lys	S		Pro	Leu	Ser	Leu	Arg	Ser	Lys	-	Huang et al., 2013
Pro-Leu-Ser-Leu-Arg-Ser-Lys			Pro-Leu-Ser-Leu-Arg+Ser-Lys	S		Leu	Ser	Leu	Arg	Ser	Lys	-	-	Huang et al., 2013
prolactin	P01236	29-227	peptide-Leu184+Gln-peptide	P		Leu	Pro	Ser	Leu	Gln	Met	Ala	Asp	Macotela et al., 2006	21575
prolactin	P01236	29-227	peptide-Ala139+Ile-peptide	P		Ala	Pro	Glu	Ala	Ile	Leu	Ser	Lys	Macotela et al., 2006
Py-Pro-Leu-Gly-Leu-Arg-Ser-Lys			Py-Pro-Leu-Gly-Leu+Arg-Ser-Lys	S		Pro	Leu	Gly	Leu	Arg	Ser	Lys	-	Huang et al., 2013
Py-Pro-Leu-Gly-Leu-Arg-Ser-Lys			Py-Pro-Leu+Gly-Leu-Arg-Ser-Lys	S		-	Py	Pro	Leu	Gly	Leu	Arg	Ser	Huang et al., 2013
Py-Pro-Leu-Ser-Leu-Arg-Ser-Lys			Py-Phe-Gly-Pro-Leu+Ser-Leu-Arg-Ser-Lys	S		'-'	Py	Pro	Leu	Ser	Leu	Arg	Ser	Huang et al., 2013
QF-24			Mca-Pro-Leu-Gly+Leu-Dpa-Ala-Arg-NH2	S		Mca	Pro	Leu	Gly	Leu	Dpa	Ala	Arg	Bannikov et al., 2004
Septin-2	P42208	1-361	peptide-Ser238+Val-peptide	N	MS	Ile	Pro	Phe	Ser	Val	Val	Gly	Ser	Prudova et al., 2010
Septin-5	Q9Z2Q6	1-369	peptide-Ala245+Val-peptide	N	MS	Ala	Pro	Phe	Ala	Val	Ile	Gly	Ser	Prudova et al., 2010
SERPINE2 plasminogen activator inhibitor type 1, member 2 isoform a precursor	P07093	20-398	peptide-Ile107+Val-peptide	P	MS	Asn	Lys	Asp	Ile	Val	Thr	Val	Ala	Xu et al., 2008	22544
SERPINE2 plasminogen activator inhibitor type 1, member 2 isoform a precursor	P07093	20-398	peptide-Lys105+Asp-peptide	P	MS	Lys	Lys	Asn	Lys	Asp	Ile	Val	Thr	Xu et al., 2008	22783
SERPINE2 plasminogen activator inhibitor type 1, member 2 isoform a precursor	P07093	20-398	peptide-Gly63+Met-peptide	P	MS	Ser	Val	Leu	Gly	Met	Leu	Gln	Leu	Xu et al., 2008	22784
SERPINE2 plasminogen activator inhibitor type 1, member 2 isoform a precursor	P07093	20-398	peptide-Ile58+Ala-peptide	P	MS	Pro	His	Gly	Ile	Ala	Ser	Val	Leu	Xu et al., 2008	22785
SERPINE2 plasminogen activator inhibitor type 1, member 2 isoform a precursor	P07093	20-398	peptide-Gly57+Ile-peptide	P	MS	Ser	Pro	His	Gly	Ile	Ala	Ser	Val	Xu et al., 2008	22786
SERPINE2 plasminogen activator inhibitor type 1, member 2 isoform a precursor	P07093	20-398	peptide-Leu254+Ile-peptide	P	MS	Ile	Ser	Met	Leu	Ile	Ala	Leu	Pro	Xu et al., 2008	22787
SERPINE2 plasminogen activator inhibitor type 1, member 2 isoform a precursor	P07093	20-398	peptide-Val299+Ala-peptide	P	MS	Phe	Thr	Ala	Val	Ala	Gln	Thr	Asp	Xu et al., 2008	22788
SERPINE2 plasminogen activator inhibitor type 1, member 2 isoform a precursor	P07093	20-398	peptide-Gly312+Ile-peptide	P	MS	Lys	Val	Leu	Gly	Ile	Thr	Asp	Met	Xu et al., 2008	22789
SERPINE2 plasminogen activator inhibitor type 1, member 2 isoform a precursor	P07093-2	20-397	peptide-Arg329+Ser-peptide	P	MS	Lys	Ile	Thr	Arg	Ser	Glu	Asn	Leu	Xu et al., 2008	22790
SERPINE2 plasminogen activator inhibitor type 1, member 2 isoform a precursor	P07093	20-398	peptide-Val347+Ser-peptide	P	MS	Lys	Ile	Glu	Val	Ser	Glu	Asp	Gly	Xu et al., 2008	22791
SERPINE2 plasminogen activator inhibitor type 1, member 2 isoform a precursor	P07093	20-398	peptide-Ser367+Pro-peptide	P	MS	Ala	Arg	Ser	Ser	Pro	Pro	Trp	Phe	Xu et al., 2008	22792
small inducible cytokine B5 precursor	P50228	41-132	peptide-Ser44+Val-peptide	P		Ala	Pro	Ser	Ser	Val	Ile	Ala	Ala	Van den Steen et al., 2003	18607
small inducible cytokine B6	P80162	38-114	peptide-Ser41+Ala-peptide	P		Gly	Pro	Val	Ser	Ala	Val	Leu	Thr	Van den Steen et al., 2003	18602
small inducible cytokine B6	P80162	38-114	peptide-Ala42+Val-peptide	P		Pro	Val	Ser	Ala	Val	Leu	Thr	Glu	Van den Steen et al., 2003	18603
small inducible cytokine B6	P80162	38-114	peptide-Val43+Leu-peptide	P		Val	Ser	Ala	Val	Leu	Thr	Glu	Leu	Van den Steen et al., 2003	18604
SPARC	P09486	18-303	peptide-Pro47+Val-peptide	P		Gly	Ala	Asn	Pro	Val	Gln	Val	Glu	Sasaki et al., 1997	18254
SPARC	P09486	18-303	peptide-Gln49+Val-peptide	P		Asn	Pro	Val	Gln	Val	Glu	Val	Gly	Sasaki et al., 1997	18255
SPARC	P09486	18-303	peptide-Glu214+Leu-peptide	P		His	Pro	Val	Glu	Leu	Leu	Ala	Arg	Sasaki et al., 1997	18256
Src substrate cortactin	Q60598	1-546	peptide-Ala80+Ser-peptide	N	MS	Gly	Pro	Lys	Ala	Ser	His	Gly	Tyr	Prudova et al., 2010
stromal cell-derived factor 1	P48061	22-93	peptide-Ser25+Leu-peptide	P		Lys	Pro	Val	Ser	Leu	Ser	Tyr	Arg	Van den Steen et al., 2003	18616
substance P	P20366	58-68	peptide-Gln63+Phe-peptide	P		Lys	Pro	Gln	Gln	Phe	Phe	Gly	Leu	Backstrom & Tokes, 1995	18402
substance P	P20366	58-68	peptide-Gly66+Leu-peptide	P		Gln	Phe	Phe	Gly	Leu	Met	Gly	Lys	Backstrom & Tokes, 1995	18406
syndecan-1	P18827	23-310	peptide-Gly82+Leu-peptide	P	NT	Glu	Pro	Thr	Gly	Leu	Glu	Ala	Thr	Manon-Jensen et al., 2013
syndecan-4	P31431	19-198	peptide-Lys105+Leu-peptide	P	NT	Glu	Pro	Lys	Lys	Leu	Glu	Glu	Asn	Manon-Jensen et al., 2013
tissue factor pathway inhibitor	P10646	29-304	peptide-Lys48+Leu-peptide	P		Pro	Pro	Leu	Lys	Leu	Met	His	Ser	Belaaouaj et al., 2000	18105
Transitional endoplasmic reticulum ATPase	Q01853	2-806	peptide-Gly240+Ile-peptide	N	MS	Pro	Pro	Arg	Gly	Ile	Leu	Leu	Tyr	Prudova et al., 2010
Twinfilin-1	Q91YR1	2-350	peptide-Pro146+Leu-peptide	N	MS	Ser	Pro	Ala	Pro	Leu	Thr	Ala	Ala	Prudova et al., 2010
von Willebrand factor	P04275	764-2813	Peptide-Met1606+Val-Peptide	P	MS	Leu	Val	Tyr	Met	Val	Thr	Gly	Asn	Raife et al., 2009