EMDB Solr Search Field Documentation
FSC one-bit resolution
Resolution estimated using the FSC one-bit criterion.
FSC overfit zone resolution
Area of the overfited zone (the correlation that remains when high-resolution Fourier components in the particle stack …
FSC 0.143 randomised resolution
Resolution estimated using the phase randomised FSC and 0.143 criterion.
FSC 0.5 randomised resolution
Resolution estimated using the phase randomised FSC and 0.5 criterion.
FSC randomised at resolution
Resolution estimated using the phase randomised FSC randomised from a resolution.
FSC half-bit randomised resolution
Resolution estimated using the phase randomised FSC and half-bit criterion.
FSC three-sigma resolution
Resolution estimated using the FSC three-sigma criterion.
Calibrated defocus (max)
Maximum calibrated defocus value used during imaging.
Calibrated defocus (min)
Minimum calibrated defocus value used during imaging.
Calibrated magnification
Calibrated magnification value used during image acquisition.
CCC percentile
CCC relative percentile
Cell a (Å)
Unit cell length a (in Ångströms), aggregated from any deposited map (primary, half-map, additional, or mask).
Cell α (°)
Unit cell angle α (in degrees), aggregated from any deposited map (primary, half-map, additional, or mask).
Cell b (Å)
Unit cell length b (in Ångströms), aggregated from any deposited map (primary, half-map, additional, or mask).
Cell β (°)
Unit cell angle β (in degrees), aggregated from any deposited map (primary, half-map, additional, or mask).
Cell c (Å)
Unit cell length c (in Ångströms), aggregated from any deposited map (primary, half-map, additional, or mask).
Cell γ (°)
Unit cell angle γ (in degrees), aggregated from any deposited map (primary, half-map, additional, or mask).
ChEBI compound name
Name of the compound from the Chemical Entities of Biological Interest (ChEBI) database.
ChEBI compound name (suggest)
Name of the compound from the Chemical Entities of Biological Interest (ChEBI) database.
ChEMBL compound name (suggest)
Name of the molecule or drug from the ChEMBL bioactivity database.
Chimera
Indicates whether the molecule is a chimera (composed of parts from different sources or sequences).
Chromatic aberration corrector details
Details of the chromatic aberration correction system used in the microscope.
Citation country
Country of the institution of the cited publication's corresponding author or publisher.
Citation editor name
Name(s) of the editor(s) of the cited publication, if applicable.
Citation external references
External reference identifiers (e.g., DOI, PubMed ID) linked to citations.
Citation journal name
Name of the journal where the cited publication appeared.
Corresponding author city
City of the corresponding author's institution, extracted from the publication.
Taxonomy Class
Name of the class classification of the organism (e.g., Mammalia, Gammaproteobacteria).
Composite map
Indicates whether the entry represents a composite map, i.e., a 3D reconstruction assembled from multiple component map…
Corresponding author continent
Continent of the corresponding author's institution, extracted from the publication.
Contour Level
Value of the contour threshold used for density visualization, aggregated from any deposited map (primary, half-map, ad…
Primary Contour
Boolean indicating whether this is the primary contour level, aggregated from any deposited map (primary, half-map, add…
Contour Source
Source or method used to determine the contour level, aggregated from any deposited map (primary, half-map, additional,…
Cooling holder cryogen
Type of cryogen used in the cooling holder during specimen preparation or imaging (e.g., liquid nitrogen, liquid helium…
Quick links
Recent Entries
(Show all)Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 50
Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 9
Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 8
Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 4
Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 12
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 53
Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 7
Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 6
Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 3
Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 2
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 44
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 54
Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 5
Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 11
Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 1
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 52
Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 20
Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 16
Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 21
Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 14
Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 17
Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 15
Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 19
Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 18
Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 13
SARS-CoV-2 spike trimer in the early fusion intermediate conformation bound to the VN01H1 Fab (Fab local refinement)
SARS-CoV-2 spike trimer in the early fusion intermediate conformation bound to the VN01H1 Fab (S2 local refinement)
Human insulin receptor domains FnIII-1 and L2 bound to HIR-6 DNA aptamer
Cryo-EM structure of the PI3K alpha/KRas/HER3 phosphopeptide complex dimer on POPC/POPS/PIP2 nanodiscs
SARS-CoV-2 spike trimer in the early fusion intermediate conformation bound to the VN01H1 Fab (global refinement)
Cryo-EM structure of the PI3K alpha/KRas/HER3 phosphopeptide complex on POPC/POPS/PIP2 nanodiscs low-pass filtered to 5 angstroms
Cryo-EM structure of the Class 1 PI3K alpha/KRas complex on POPC/POPS nanodiscs low-pass filtered to 10 angstroms
Cryo-EM structure of the Class 1 PI3K alpha/KRas complex on POPC/POPS nanodiscs
Cryo-EM structure of the PI3K alpha/KRas/HER3 phosphopeptide complex on POPC/POPS/PIP2 nanodiscs
Cryo-EM structure of the PI3K alpha/KRas/HER3 phosphopeptide complex dimer on POPC/POPS/PIP2 nanodiscs low-pass filtered to 5 angstroms
TMPRSS2 (S441A) bound to the HCoV-NL63 S2'region genetically fused to the HCoV-HKU1 RBD
TMPRSS2 S441A in complex with the H1H7 Fab and anti-kappa light chain nanobody
SARS-CoV-2 spike S2 trimer stabilized in the early fusion intermediate conformation (E-FICs-v3) bound to the VN01H1 Fab
SARS-CoV-2 spike S2 trimer stabilized in the early fusion intermediate conformation (E-FICs-v3) bound to C77G12 (Fab local refinement)
SARS-CoV-2 spike S2 trimer stabilized in the early fusion intermediate conformation (E-FICs-v3) bound to the VN01H1 Fab (Fab local refinement)
Structure of the Porcine deltacoronavirus (PDCoV) receptor-binding domain bound to the RBD minibinder 11, the PD3 Fab, and the Kappa light chain nanobody
HCoV-NL63 S2' peptide bound to TMPRSS2 S441A (complexed with the H1H7 Fab and an anti-kappa-nanobody)
SARS-CoV-2 spike S2 trimer stabilized in the early fusion intermediate conformation (E-FICs-v3) bound to the VN01H1 Fab (S2 local refinement)
SARS-CoV-2 spike S2 trimer stabilized in the early fusion intermediate conformation (E-FICs-v3) bound to C77G12 (global refinement)
SARS-CoV-2 S2 trimer stabilized in the early fusion intermediate conformation by circular permutation and clamping by gp41 (E-FICs-v1)
One CAP-1 Bound to the Pointed End of Cofilin F-actin, Consensus map
Cryo-EM Map of the Periplasmic Domain of AAA Protease FtsH in a Novel Orientation
Cryo-EM Map of the Transmembrane Domain of AAA Protease FtsH in a Novel Orientation
Focused map of area 1 of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 3
Composite map of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 3
Consensus map of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 3
Focused map of area 1 of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 4
Consensus map of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 4
Composite map of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 4
Focused map of area 2 of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 4
Focused map of area 2 of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 3
Structure of eIF2B decamer bound to (P)eIF2 alpha and Compound A-(S)
Cryo-EM structure of Arabidopsis TIR-NLR WRR4A tetramer in complex with weakly bound effector CCG28 (C2-symmetry)
CM1-activated gTuRC in complex with nascent alpha-E254D mutant microtubules
Cryo-EM structure of human ATR-ATRIP complex with ATPgammaS and Chk1
Composite map of Type II-A CRISPR integrase prespacer catching complex, State I
Focused map of Type II-A CRISPR integrase prespacer catching complex, State I
Focused map of Type II-A CRISPR integrase prespacer catching complex, State II
Human Argonaute2 R315V/H316A - guide RNA in complex with a fully complementary target (conformation 2)
Human Argonaute2 WT - guide(3 prime-amino) RNA in complex with a fully complementary target
Human Argonaute2 R315V/H316A - guide10U RNA in complex with a complementary target to position 19
The partially ruptured LBD state of GluK2/K5 with 5-iodowillardiine and kynurenic acid sodium salt
Structure of the Porcine deltacoronavirus (PDCoV) receptor-binding domain bound to the RBD minibinder 11, the PD3 Fab, and the Kappa light chain nanobody (local refinement)
CryoEM structure of transcribing RNA polymerase II elongation complex_Local density map of Jaw/RPB9
CryoEM structure of transcribing RNA polymerase II elongation complex_Composite map
CryoEM structure of transcribing RNA polymerase II elongation complex_Local density map of RPB9
CryoEM structure of transcribing RNA polymerase II elongation complex_Local density map of RPB12/Wall
CryoEM structure of transcribing RNA polymerase II elongation complex_3D classification map containing the complete nucleic acid scaffold
CryoEM structure of transcribing RNA polymerase II elongation complex_Local density map of RPB4/7
Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1 and TFB1M (state N3)
Structure of the human chimera HCN112 hyperpolarization-activated cyclic nucleotide-gated ion channel.
Human TRPC5 in complex with (-) englerin A, full occupancy, intermediary desensitized state
Structure of the human HCN1dC hyperpolarization-activated cyclic nucleotide-gated ion channel.
Human TRPC5 in complex with (-) englerin A, full occupancy, state 1, on 290 nm gold foil holes (HexAuFoil)
TRPC5 apo cryoEM map in the presence of pluronic acid (PA), state 2
Human TRPC5 in complex with (-) englerin A, mixed occupancy, state 2
Human TRPC5 in complex with (-) englerin A, partial occupancy (2EA:2LIP stoichiometry) state 1
Human TRPC5 in complex with (-) englerin A, mixed occupancy, state 1
Human TRPC5 in complex with (-) englerin A, full occupancy, state 2, on 290 nm gold foil holes (HexAuFoil)
Human TRPC5 in complex with (-) englerin A, mixed occupancy_2, state 2
Human TRPC5 in complex with (-) englerin A, partial occupancy (2EA:2LIP stoichiometry) state 2
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (HibA-uL5 conformation)
in situ subtomogram average of the V-ATPase from dopaminergic varicosities
Cryo-EM structure of human urate transporter GLUT9 bound to a selective inhibitor SG4
in situ subtomogram average of TRiC particles from dopaminergic varicosities
Ubiquinol Binding Site of Cytochrome bo3 from Acinetobacter baumannii
Ubiquinol Binding Site of Cytochrome bo3 from Acinetobacter baumannii
Ubiquinol Binding Site of Cytochrome bo3 from Acinetobacter baumannii
Structure of KP.3 spike in complex with Nanosota-9B (local refinement)
Cryo-EM structure of cGAS tetramer in complex with BuDNA (bubble DNA)
CHIP E3 ligase CC domain dimer-Fab 2D2 epitope focused refinement
CryoEM structure of human MATa2 in complex with MAT2B isoform v1 at 2.6 A resolution
Single particle cryo-EM structure of human MTCH2 (hyperactive mutant K25E Y235A V238D)
Single particle cryo-EM structure of human MTCH2 (hyperactive mutant F285N F286N)
CryoEM map of the ATPase domain of SMARCA4 and the finger helix of BCL7A bound to a nucleosome
Cryo-EM map of the ATPase domain of SMARCA4 bound to a nucleosome
Cryo-electron microscopic structure of a novel amidohydrolase ADH3 triple mutation
Consensus map of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 1
Composite map of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 5
Composite map of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 1
Focused map of area 2 of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 1
Consensus map of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 2
Focused map of area 2 of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 2
Focused map of area 1 of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 5
Human carboxyhemoglobin bound to full-length Staphylococcus aureus IsdH - IsdH:Hbdim complex
Consensus map of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 5
Composite map of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 2
Focused map of area 1 of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 1
Focused map of area 1 of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 2
CryoEM structure of human MATa2 in complex with MAT2B isoform v1 at 2.6 A resolution
Focused map of area 3 of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 5
Focused map of area 2 of the type III CRISPR-associated deaminase in complex cA6 and ATP, State 5
Cryo-EM structure of the spermine-bound sea lamprey TAAR348-Gs complex
Cryo-EM structure of the spermine-bound sea lamprey TAAR348-Gs complex
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 48
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 1
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 6
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 2
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 7
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 51
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 3
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 55
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 5
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 49
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 4
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 18
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 23
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 10
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 20
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 11
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 14
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 16
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 9
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 21
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 8
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 17
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 15
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 22
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 13
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 12
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 19
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 25
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 35
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 24
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 31
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 29
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 33
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 28
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 36
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 26
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 27
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 40
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 43
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 38
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 32
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 42
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 39
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 37
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 34
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 41
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 30
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 47
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 45
Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 10
Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 46
