Important news: due to a network upgrade, the OneDep deposition service will not be available from Mon 17 June 17:00 BST until Tue 18 June 9:00 BST. Thank you for your understanding!
EMDB (the Electron Microscopy Data Bank) is a public repository for electron cryo-microscopy maps and tomograms of macromolecular complexes and subcellular structures. It covers a variety of techniques, including single-particle analysis, electron tomography, sub-tomogram averaging, fibre diffraction and electron crystallography. More...
As of 12 January 2022, EMDB contains 18198 entries (latest entries, trends).
EMDB News
-
wwPDB is switching to version 3 of the EMDB data model. From 9 February 2022 the old data model (v1.9.6) will no longer be supported. Read the wwPDB announcement for more details.
-
EMDB now has a dedicated Talks & Tutorials page where we have collected short videos that introduce key functionality of the new website as well as recorded talks from EMDB staff.
-
EMDB has also moved to a new location. What do I need to know?
Explore EMDB
Select a graph from the pull-down menu. Click on any element of a graph to see the corresponding list of EMDB entries.
Quick Links
Recent Entries
(Show all)
Microtubules in presence of 80 nM CEP97^CP110, 15 uM tubulin and GMPCPP-stabilized seeds
Microtubules in presence of 80 nM CEP97^CP110, 15 uM tubulin and GMPCPP-stabilized seeds
Microtubules in presence of 15 uM tubulin and GMPCPP-stabilized seeds
Microtubules in presence of 80 nM CEP97^CP110, 15 uM tubulin and GMPCPP-stabilized seeds
SARS-CoV-2 spike in complex with the S2K146 neutralizing antibody Fab fragment (local refinement of the RBD and S2K146)
SARS-CoV-2 spike in complex with the S2K146 neutralizing antibody Fab fragment (two receptor-binding domains open)
Cryo-EM structure of the spike of SARS-CoV-2 Omicron variant of concern
Structure of the EIAV CA-SP hexamer (C6), acquired on a Krios 4, Selectris/Falcon4, processed with Relion/M
Structure of dimeric phosphorylated Pediculus humanus (Ph) PINK1 with extended alpha-C helix in chain B
Structure of dimeric phosphorylated Pediculus humanus (Ph) PINK1 with kinked alpha-C helix in chain B
Structure of dodecameric unphosphorylated Pediculus humanus (Ph) PINK1 D357A mutant
Structure of dimeric unphosphorylated Pediculus humanus (Ph) PINK1 D357A mutant
CryoEM map of anchor 222-1C06 Fab and lateral patch 2B05 Fab binding H1 HA
Negative stain map of polyclonal Fab 236.7 binding the anchor and esterase epitopes of H1 HA
Negative stain map of polyclonal Fab 236.7 binding the RBS epitope of H1 HA
Negative stain map of polyclonal Fab 241.14 binding an epitope on the top of the head of H1 HA
Negative stain map of polycolonal Fab 236.14 binding the RBS epitope of H1 HA
Negative stain map of polyclonal Fab 236.14 binding the esterase epitope of H1 HA
Negative stain map of polyclonal Fab 241.7 binding the esterase epitope of H1 HA
Negative stain map of polyclonal Fab 241.14 binding the esterase epitope of H1 HA
Negative stain map of polyclonal Fab 236.14 binding the anchor epitope of H1 HA
Negative stain map of polyclonal Fab 236.14 binding an epitope on the top of the head of H1 HA
Negative stain map of polyclonal Fab 241.14 binding the RBS epitope of H1 HA
Negative stain map of polyclonal Fab 241.14 binding the anchor epitope of H1 HA
cryoEM reconstruction of the HIV gp140 in complex with the extracellular domains of CD4 and the adnectin domain of Combinectin. The gp140 and CD4 coordinates from entry 6EDU were rigid body fitted to the EM map along withe the crystal structure of CD4+adnectin
The complex of dephosphorylated human cystic fibrosis transmembrane conductance regulator (CFTR) and Lumacaftor (VX-809)
The complex of phosphorylated human cystic fibrosis transmembrane conductance regulator (CFTR) with ATP/Mg and Tezacaftor (VX-661)
The complex of phosphorylated human cystic fibrosis transmembrane conductance regulator (CFTR) with ATP/Mg and Lumacaftor (VX-809)
Cryo-EM structure of prestin from gerbil (Meriones unguiculatus) in the presence of NaCl
Subtomogram average of D. melanogaster Ribosomes from tomograms collected on a cryo-lift-out lamella
SARS-CoV-2 spike protein in complex with ACE2, Beta variant, C3 state
Subtomogram average of 80S ribosomes from a cryo-FIB-lamella of Sum159 human cell line
Subtomogram average of 80S ribosomes from a cryo-FIB-lamella of Sum159 human cell line prepared after cryo-FIB-SEM volume imaging
Subtomogram average of 80S ribosomes a cryo-FIB-lamella of Sum159 human cell line prepared after cryo-FIB-SEM volume imaging
Cryo-electron tomograms from cryo-FIB-lamellae of Sum159 human cell line
Cryo-electron tomogram of a cryo-FIB lamella of Emiliania huxleyi cells
Cryo-electron tomogram of a 3D correlated lipid droplet in a cryo-FIB-milled HeLa cell
KU, Artemis, DNA and DNA-PKcs_Nheat in the NHEJ DNA end processing complex
Structure of ligand-free ALDH1L1 (10-formyltetrahydrofolate dehydrogenase)
Structure of ALDH1L1 (10-formyltetrahydrofolate dehydrogenase) in complex with NADP
HUMAN RETINAL VARIANT IMPDH1(546) TREATED WITH ATP, IMP, NAD+, OCTAMER-CENTERED
HUMAN RETINAL VARIANT IMPDH1(546) TREATED WITH ATP, IMP, NAD+, INTERFACE-CENTERED
HUMAN RETINAL VARIANT IMPDH1(595) TREATED WITH GTP, ATP, IMP, NAD+, OCTAMER-CENTERED
HUMAN RETINAL VARIANT IMPDH1(546) TREATED WITH GTP, ATP, IMP, NAD+; INTERFACE-CENTERED
HUMAN RETINAL VARIANT IMPDH1(546) TREATED WITH GTP, ATP, IMP, NAD+; INTERFACE-CENTERED
HUMAN RETINAL VARIANT IMPDH1(595) TREATED WITH ATP; INTERFACE-CENTERED
HUMAN RETINAL VARIANT IMPDH1(595) TREATED WITH GTP, ATP, IMP, NAD+, INTERFACE-CENTERED
HUMAN RETINAL VARIANT IMPDH1(595) TREATED WITH ATP, OCTAMER-CENTERED
The structure of MutS bound to one molecule of ATP and one molecule of ADP
The structure of the native CNGA1/CNGB1 CNG channel from retinal rods
Hendra virus receptor binding protein in complex with HENV-103 and HENV-117 Fabs
Exendin-4-bound Glucagon-Like Peptide-1 (GLP-1) Receptor in complex with Gs protein
Oxyntomodulin-bound Glucagon-Like Peptide-1 (GLP-1) Receptor in complex with Gs protein
Human calcium sensing receptor adopts an inactive open-closed conformation
Human calcium sensing receptor adopts an inactive open-open conformation
Multidrug resistance transporter BmrA mutant E504A bound with ATP, Mg, and Rhodamine 6G solved by Cryo-EM
CryoEM structure of Mycobacterium tuberculosis UMP Kinase (UMPK) in complex with UDP and UTP
CryoEM structure of the human sodium proton exchanger NHA2 in nanodisc
Cryo-EM density map of complement C4b in complex with nanobody G3
Maltose Binding Protein in complex with Hsp90 and co-chaperone p23
The GR-Maturation Complex: Glucocorticoid Receptor in complex with Hsp90 and co-chaperone p23
Structure of the Lactococcus lactis Csm CTR_3:2 CRISPR-Cas Complex
Structure of the Lactococcus lactis Csm CTR_4:3 CRISPR-Cas Complex
