Fourier Shell Correlation (FSC) server
Welcome to the PDBe Fourier Shell Correlation (FSC) server!
This web service will calculate and plot the FSC curve from two 3D reconstructions that you upload.
You will be able to download the FSC curve as an XML file that can then be uploaded
as a part of a deposition to EMDB. This server uses the EMAN2
package
for the FSC calculation. The implementation of the 3 sigma and half bit threshold
curves is based on Imagic code kindly provided by Michael Schatz (ImageScience
Software GmbH).
Supported input file formats
include CCP4/MRC, Imagic, Spider,
EMAN2 HDF5 and others. We have one test data sets that you can use to try out the service
here. We appreciate your continuing
support and
feedback!
The uploaded maps will be deleted after the calculation is completed.
Quick links
Recent Entries
(Show all)Subtomogram average of short bridges of the yeast ER-mitochondria encounter structure (ERMES). The population half containing shorter bridge structures was averaged.
Cryo-EM structures of human mitochondrial NAD(P)+-dependent malic enzyme in apo form
Cryo-EM map of detergent-solubilized human IL-6 signaling complex with full extracellular domains
Prefusion-stabilized Nipah virus fusion protein complexed with Fab 1H8
Cryo-EM structure of cytochrome bc1 complex (complex-III) from respiratory supercomplex of Tetrahymena thermophila
Cryo-EM map of human CLCF1 signaling complex with full extracellular domains
Prefusion-stabilized Nipah virus fusion protein complexed with Fab 2B12
Cryo-EM map of human LIF signaling complex with full extracellular domains
Cryo-EM map of human IL-27 signaling complex with full extracellular domains
In situ structure of polymerase complex of mammalian reovirus in virion
In situ structure of polymerase complex of mammalian reovirus in the reloaded state
Structure of the Rat GluN1-GluN2C NMDA receptor in complex with glycine and glutamate (major class in asymmetry)
CryoEM structure of Go-coupled NTSR1 with a biased allosteric modulator
CryoEM structure of the Chikungunya virus nsP1 capping pores in complex with SAM
Cryo-EM structure of human IgM-Fc in complex with the J chain and the DBL domain of DBLMSP2
Cryo-EM structure of cytochrome c oxidase dimer (complex IV) from respiratory supercomplex of Tetrahymena thermophila
Tail barrel assembly of the phicrAss001 virion with C12 symmetry imposed
Cryo-EM map of human IL-27 signaling complex: focused refinement on the interaction core region
Cryo-EM map of human CNTF signaling complex with full extracellular domains: refined from selected full particle dataset, with better resolution in the interaction core region
Structure of mitochondrial complex I from Drosophila melanogaster, Flexible-class 1
Structure of GluN1b-GluN2D NMDA receptor in complex with agonists glycine and glutamate.
Cryo-EM structure of human ABCD1 E630Q in the presence of ATP in inward-facing state 2
Prefusion-stabilized Nipah virus fusion protein complexed with Fab 1A9
Structure of Fibrillin Microfibrils from Cryo-Electron Microscopy reveals the site of latent TGFbeta binding and structural perturbations in disease-linked mutations
The intermediate pre-Tet-S1 state of G264A mutated Tetrahymena group I intron with 6nt 3'/5'-exon and 2-aminopurine nucleoside
Cryo-EM structure of E. coli RNA polymerase backtracked elongation complex harboring a terminal mismatch
Cryo-EM structure of succinate dehydrogenase complex (complex-II) in respiratory supercomplex of Tetrahymena thermophila
The Tet-S1 state of G264A mutated Tetrahymena group I intron with 6nt 3'/5'-exon and 2-aminopurine nucleoside
Cryo-EM structure of human CNTFR alpha in complex with the Fab fragments of two antibodies
Cryo-EM structure of Tetrahymena ribozyme conformation 4 undergoing the second-step self-splicing
The intermediate pre-Tet-S1 state of wild-type Tetrahymena group I intron with 6nt 3'/5'-exon
Tail muzzle assembly of the phicrAss001 virion with C6 symmetry imposed
Cryo-EM structures of human mitochondrial NAD(P)+-dependent malic enzyme in a ternary complex with NAD+ and allosteric inhibitor EA
Cryo-EM structure of Tetrahymena ribozyme conformation 3 undergoing the second-step self-splicing
The relaxed pre-Tet-S1 state of wild-type Tetrahymena group I intron with 6nt 3'/5'-exon
Portal protein assembly of the phicrAss001 virion with C12 symmetry imposed
Prefusion-stabilized Nipah virus fusion protein complexed with Fab 1H1
Cryo-EM structure of the Serotonin 6 (5-HT6) receptor-DNGs-scFv16 complex
Cryo-EM structure of E. coli RNA polymerase Elongation complex in the Transcription-Translation Complex (RNAP in an anti-swiveled conformation)
The relaxed pre-Tet-S1 state of G264A mutated Tetrahymena group I intron with 6nt 3'/5'-exon and 2-aminopurine nucleoside
Cryo-EM structure of NADH:ubiquinone oxidoreductase (complex-I) from respiratory supercomplex of Tetrahymena thermophila
Cryo-EM structures of human mitochondrial NAD(P)+-dependent malic enzyme in a ternary complex with NAD+ and allosteric inhibitor MDSA
Cryo-EM structure of Tetrahymena ribozyme conformation 6 undergoing the second-step self-splicing
Structure of the giant inhibitor of apoptosis, BIRC6 (multibody map 3)
Structure of the Rat tri-heteromeric GluN1-GluN2A-GluN2C NMDA receptor in complex with glycine and glutamate
Cryo-EM structure of Tetrahymena ribozyme conformation 5 undergoing the second-step self-splicing
In situ structure of polymerase complex of mammalian reovirus in the pre-elongation state
In situ structure of polymerase complex of mammalian reovirus in the core
Cryo-EM structure of Tetrahymena ribozyme conformation 2 undergoing the second-step self-splicing
Structure of mitochondrial complex I from Drosophila melanogaster, Helix-locked state
CryoEM structure of the Chikungunya virus nsP1 capping pores in complex with m7GTP and SAH ligands
Cryo-EM structure of the SARS-CoV-2 HR1HR2 fusion core complex with N969K mutation
Cryo-EM structure of human CLCF1 in complex with CRLF1 and CNTFR alpha
Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)
Cryo-EM structure of Tetrahymena ribozyme conformation 1 undergoing the second-step self-splicing
Prefusion-stabilized Nipah virus fusion protein complexed with Fab 4H3
Cryo-EM structure of human IgM-Fc in complex with the J chain and the DBL domain of DBLMSP
Structure of the Rat GluN1-GluN2C NMDA receptor in complex with glycine and glutamate (minor class in symmetry)
Structure of the giant inhibitor of apoptosis, BIRC6 (multibody map 1)
Prefusion-stabilized Nipah virus fusion protein complexed with Fab 2D3
Cryo-EM map of human CNTF signaling complex with full extracellular domains: refined from a particle subset, with lower global resolution but improved LIFR D6-D8 density
Structure of the Rat GluN1-GluN2C NMDA receptor in complex with glycine, glutamate and (R)-PYD-106
Dehosphorylated, ATP-bound human cystic fibrosis transmembrane conductance regulator (CFTR)
Neurotensin receptor allosterism revealed in complex with a biased allosteric modulator
The pre-Tet-C state of wild-type Tetrahymena group I intron with 30nt 3'/5'-exon
Cryo-EM structure of human angiotensin receptor AT1R in complex Gq proteins and Sar1-AngII
Focused map for structure of IgE bound to the ectodomain of FceRIa
Structure of the giant inhibitor of apoptosis, BIRC6 (homogenous refinement)
Structure of the giant inhibitor of apoptosis, BIRC6 (multibody map 2)