CAPRI: Critical Assessment of PRediction of Interactions
Community wide experiment on the comparative evaluation of protein-protein docking for structure prediction
Hosted By EMBL/EBI-MSD Group
Schedule of Round 26 extension
Monday Feb. 20 - Round extension opens
Download additional information - 20th Feb 2012
Sunday March 18 Deadline for submission.
Round 26
Round 26 ID mapping from group number to Accessor Number for Target 53
Round 26 ID mapping from group number to Accessor Number for Target 54
NOTE The Coordinates are not yet available for download
T53 result summary
T54 result summary
Target 53
Results T53 - click here to see the results
Full results (regular assessment):
| Clash threshold | 62.31 |
| average | 18.21 |
| std dev | 22.05 |
| Predictor | Uploader | Scorer |
| Nr groups | 42 | 15 | 13 |
| High Accuracy (***) | 1 ( 1) | 0 ( 0) | 0 ( 0 <- 0) |
| Medium (**) | 11 ( 9) | 9 ( 5) | 12 ( 9 <- 4) |
| Acceptable (*) | 31 (17) | 92 (12) | 24 ( 8 <- 4) |
| Incorrect | 321 (39) | 1090 (14) | 85 (13 <- 12) |
| Clashes | 20 ( 5) | 209 ( 4) | 9 ( 3 <- 2) |
| Low ID | 0 ( 0) | 0 ( 0) | 0 ( 0 <- 0) |
| Total | 384 (40) | 1400 (14) | 130 (13 <- 13) |
Numbers in parentheses refer to the number of different source groups producing these models
(ie z scorer groups recognize y out of x uploader groups)
Target 54
Results T54 - click here to see the results
Full results (regular assessment):
| Clash threshold | 64.14 |
| average | 17.43 |
| std dev | 23.36 |
| Predictor | Uploader | Scorer |
| Nr groups | 41 | 16 | 13 |
| High Accuracy (***) | 0 ( 0) | 0 ( 0) | 0 ( 0 <- 0) |
| Medium (**) | 0 ( 0) | 1 ( 1) | 0 ( 0 <- 0) |
| Acceptable (*) | 6 ( 4) | 18 ( 7) | 0 ( 0 <- 0) |
| Incorrect | 350 (39) | 1196 (14) | 119 (13 <- 14) |
| Clashes | 21 ( 6) | 185 ( 4) | 11 ( 3 <- 2) |
| Low ID | 0 ( 0) | 0 ( 0) | 0 ( 0 <- 0) |
| Total | 377 (39) | 1400 (14) | 130 (13 <- 14) |
Numbers in parentheses refer to the number of different source groups producing these models
(ie z scorer groups recognize y out of x uploader groups)
ROUND 26 Timeline
2nd Nov. 2011 - Registration opens for Round 26
7th Nov. 2011 - Round 26 opens - Prediction of targets 53,54 and Scoring for targets 55,56
20th Nov. 2011 - Deadline for submitting models for target 53, 54
24th Nov 2011 - Scoring starts for targets 53, 54
27th Nov. 2011 - Deadline for scoring submission for targets 53, 54
22nd Dec. 2011 - Deadline for scoring submission for targets 55, 56
Target T53 a protein-protein complex (homology/unbound)
Target T54 a protein-protein complex (homology/unbound)
Target T55 (scoring only) is a large set (>500) of point mutations made in a protein engineered to bind another; given the X-ray structure of one complex, the challenge is to predict the effect of each mutation on the interaction.
Target T56 (scoring only) is a large set (>500) of point mutations made in a protein engineered to bind another; given the X-ray structure of one complex, the challenge is to predict the effect of each mutation on the interaction.
Documentation and Targets Round 26
Participants
Management Group
Prediction formats
Download Opens 7th Nov 2011
Upload Opens 7th Nov 2011
Scoring download open 24th Nov 2011
Entries
Current submissions
SCORERS
Scorers can download the server set of submissions from
http://www.scmbb.ulb.ac.be/capri/
using the same login user/pass as distributed for Capri round26. Full details
and deadlines are given on this site.
Email Problems or Queries to Sameer Velankar
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