spacer

CAPRI: Critical Assessment of PRediction of Interactions

Community wide experiment on the comparative evaluation of protein-protein docking for structure prediction

Hosted By EMBL/EBI-MSD Group

Round 18

Round 18 ID mapping from group number to Accessor Number for Target 40
NOTE The Coordinates are not yet available for download

Target 40

With two possible interfaces to prediction, there are two evaluations, indicated as T40.CA and T40.CB. the sum of the two gives the cumulative prediction, since the two interfaces are at opposite sides of the receptor (ie (*) for CA can never also be (*) for CB).

The uploads are re-analysed to include results from Scorer 10 and corrected file from Haddock server that was not transferred properly for analysis the first time.None of the other results have been affected.
Results T40.CA
Results T40.CB
Automatic listing of the best prediction


T40.CA T40.CB cumulative
Predictor groups 38 38 38
High accuracy (***): 47 31 78
Medium accur. (**): 33 21 54
Acceptable (*): 17 14 31
Incorrect: 248 279 182
Clashes: 23 23 23
368 368 368
Clash threshold 79
average 21
std dev 29


T40.CA T40.CB cumulative
Uploader groups 22 22 22
High accuracy (***): 90 86 176
Medium accur. (**): 141 22 163
Acceptable (*): 123 26 149
Incorrect: 1532 1752 1398
Clashes: 294 294 294
2180 2180 2180


T40.CA T40.CB cumulative
Scorer groups 14 14 14
High accuracy (***): 19 19 38
Medium accur. (**): 24 13 37
Acceptable (*): 7 2 9
Incorrect: 67 83 33
Clashes: 14 14 14
131 131 131


Performance (accept. or better) T40.CA T40.CB cumulative
Predictor 26.4% 17.9% 44.3%
Uploader 16.2% 6.1% 22.4%
Scorer 38.2% 26.0% 64.1%


ROUND 18 Timeline
22nd Jun 2009 Round 18 opens - prediction of T40
12th Jul 2009 Deadline for submitting models of T40
16th Jul 2009 Scoring Starts
19th Jul 2009 Deadline for Scoring submissions


Target T40 protein-protein complex (bound/unbound)


Documentation and Targets Round 18

  • Participants
  • Management Group
  • Prediction formats
  • Download Opens 22nd June 2009
  • Upload Opens 22nd June 2009

  • Entries

  • Current submissions

  • SCORERS

    Scorers can download the server set of submissions from
    http://www.scmbb.ulb.ac.be/capri/ using the same login user/pass as distributed for Capri round18. Full details and deadlines are given on this site.


    Email Problems or Queries to Sameer Velankar

    spacer
    spacer