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CAPRI: Critical Assessment of PRediction of Interactions
 
  
   ROUND 1
   ROUND 2
   ROUND 3
   ROUND 4
   ROUND 6
   ROUND 7
   ROUND 8
 
 MSD  CAPRI: Critical Assessment of PRediction of Interactions

Round 8 CAPRI community wide experiment on the comparative evaluation of protein-protein docking for structure prediction

Hosted By EMBL/EBI-MSD Group


Capri Target Publications

T22 U5-15K/U5-52

Nielsen, T.K., Liu, S., Luhrmann, R., Ficner, R. The crystal structure of a binary U5 snRNP complex
(to be published).
PDB entry 1syx.
Nielsen TK, Liu S, Luhrmann R, Ficner R.
Structural Basis for the Bifunctionality of the U5 snRNP 52K Protein (CD2BP2).
J Mol Biol. 2007 Apr 4; [Epub ahead of print]

T23 GBP1 dimer

Ghosh A, Praefcke GJ, Renault L, Wittinghofer A, Herrmann C. How guanylate-binding proteins achieve assembly-stimulated processive cleavage of GTP to GMP.
Nature 2006 440:101-4.
PDB entry 2b8w.

Round 8 is NOW CLOSED

Agreement (pdf)

Numerical evaluation

  • Identification of Participants For Capri round8 ID Mapping
  • The results are now available for Round 8

  • Results for Target 22
  • Results for Target 23



  • Server Rules:

  • A server is open to the public; that includes other CAPRI participants
  • It must return its submission within 72 hours the server crew downloading the target files after the opening time of each CAPRI round. (we track download times and access to the targets)
  • It may be closed to the public during that period, but must reopen as soon as it has returned its submission.

  • Server Results:

    Are available here under SERVER RESULTS (password locked


    Details

    Round8 is now closed.

    Both Targets T22 and T23 have been cancelled except for the SERVERS.

    Our sincere apologies that we failed to search google sufficiently for the targets prior to the announcement as full details are available on the web in PhD thesis reports.

  • Contains T22
  • Contains T23 details
  • The SCORING Part of Round8 will continue using at least the SERVER models and will also allow us to perfect the mechanism for carrying out this part of CAPRI rounds


    Schedule

    The schedule will be:

    start Round 8 of CAPRI on Monday Sept. 5th 2005

    Submission will Closed on Saturday Sept. 10th 2005 midnight UK time

    Scorer schedule see below


    Documentation and Targets Round 8

  • Participants
  • Management Group
  • Prediction formats
  • Download Targets CLOSED
  • Upload of submissions CLOSED
  • At the Evaluation Meeting, it was agreed that 10 models can be submitted, and that they must be ranked.

  • Entries

  • Current submissions

  • SCORERS

    Scorers can download the server set of submissions from
    http://www.scmbb.ulb.ac.be/capri/ using the same login user/pass as distributed for Capri round8. Full details and deadlines are given on this site.


    Email Problems or Queries to Kim Henrick