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Serratia odorifera

Taxonomy
Taxonomy database identifier: 618
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Enterobacteriales
Family Enterobacteriaceae
Genus Serratia
Species odorifera
Peptidase View peptidase sequences from Serratia odorifera
Count of known and putative peptidases: 111, non-peptidase homologues 19
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1369940
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1370335
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1370492
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1374982
A- A39 unassigned family A39 unassigned peptidases MER1373874 wapA_2
AC A8 A08.001 signal peptidase II MER1152320
AC A8 A08.001 signal peptidase II MER0324317
AC A8 A08.001 signal peptidase II MER0324315
AD A24 A24.001 type 4 prepilin peptidase 1 MER0332854 gspO HMPREF0758_2035
AD A24 A24.A10 gspO g.p. (Escherichia coli) MER0332901
AD A24 A24.A10 gspO g.p. (Escherichia coli) MER0332948 gspO2 HMPREF0758_3259
AE A31 A31.003 HycI peptidase MER0427695 SOD_d01170
CA C39 C39.005 colicin V processing peptidase MER0445694
CA C39 C39.005 colicin V processing peptidase MER0302410
CA C39 C39.005 colicin V processing peptidase MER0302465
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0276822 pcp2 SOD_e03950
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0279922 pcp1 SOD_c00430
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0243829 SOD_e00660
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0243824
CL C82 C82.A04 YbiS protein (Escherichia coli) MER0462286
CL C82 C82.A05 YcfS protein (Escherichia coli) MER0462285
CL C82 C82.A05 YcfS protein (Escherichia coli) MER0462311
CO C40 C40.004 spr peptidase MER0452423
CO C40 C40.004 spr peptidase MER0452416
CO C40 C40.A01 NlpC protein (Escherichia coli) MER0452320 SOD_a08070
CO C40 C40.A01 NlpC protein (Escherichia coli) MER0452321
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0233472 SOD_a08460
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0376677 ydhO HMPREF0758_3923
G- G5 unassigned family G5 unassigned peptidases MER0911079 HMPREF0758_4814
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0335934 SOD_a04420
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0336008 pepN HMPREF0758_4358
MA M3 M03.004 oligopeptidase A MER0334610
MA M3 M03.004 oligopeptidase A MER0466003
MA M3 M03.005 peptidyl-dipeptidase Dcp MER0343770
MA M3 M03.005 peptidyl-dipeptidase Dcp MER0343533
MA M3 unassigned family M3 unassigned peptidases MER0465980
MA M3 unassigned family M3 unassigned peptidases MER0466004
MA M4 M04.025 protealysin MER0287838
MA M4 M04.025 protealysin MER0287818 prt HMPREF0758_2509
MA M10 M10.051 serralysin MER0276045 SOD_g02180
MA M10 M10.051 serralysin MER1208273
MA M10 M10.051 serralysin MER0291180
MA M10 M10.051 serralysin MER0291179 aprA HMPREF0758_1564
MA M32 M32.003 TcMCP1 carboxypeptidase MER0295092 SOD_b02520
MA M32 unassigned family M32 unassigned peptidases MER0295141 ctaQ HMPREF0758_3634
MA M41 M41.001 FtsH peptidase MER0233526 ftsH SOD_k00890
MA M48 M48.002 HtpX peptidase MER0276402 htpX SOD_a07670
MA M48 M48.022 low osmolarity induced peptidase MER0884009 HMPREF0758_2194
MA M90 M90.001 MtfA peptidase MER0228652
MA M90 M90.001 MtfA peptidase MER0286780 mtfA HMPREF0758_3081
MC M14 M14.034 murein peptide amidase MpaA MER0468963
MC M14 M14.034 murein peptide amidase MpaA MER0468953
MD M15 unassigned subfamily M15C unassigned peptidases MER0312357
MD M15 unassigned subfamily M15C unassigned peptidases MER0312364 HMPREF0758_1204
MD M15 unassigned subfamily M15C unassigned peptidases MER0312378 HMPREF0758_2635
MD M15 unassigned subfamily M15D unassigned peptidases MER0312570
MD M15 unassigned subfamily M15D unassigned peptidases MER0237481 SOD_a10010
MD M15 unassigned family M15 unassigned peptidases MER0837651 vanY
MD M74 M74.001 murein endopeptidase MER0238701 mepA HMPREF0758_2728
ME M16 M16.001 pitrilysin MER0314923 HMPREF0758_2304
ME M16 M16.006 pqqF protein MER0390208 pqqF HMPREF0758_3727
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0470951 SOD_g01580
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0470954
ME M16 unassigned subfamily M16A unassigned peptidases MER0390148
MF M17 M17.003 PepA aminopeptidase MER0280446 pepA SOD_k01690
MF M17 M17.004 PepB aminopeptidase MER0340365
MF M17 M17.004 PepB aminopeptidase MER0471388
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0233980 map HMPREF0758_2328
MG M24 M24.003 Xaa-Pro dipeptidase (bacteria-type) MER0482142
MG M24 M24.003 Xaa-Pro dipeptidase (bacteria-type) MER0482187
MG M24 M24.004 aminopeptidase P (bacteria) MER0239314 pepP HMPREF0758_2211
MG M24 unassigned subfamily M24A unassigned peptidases MER0483772
MG M24 unassigned subfamily M24A unassigned peptidases MER0394021 map2 HMPREF0758_4756
MG M24 unassigned subfamily M24B unassigned peptidases MER0396487
MH M20 M20.003 peptidase T MER0303204
MH M20 M20.003 peptidase T MER0471860
MH M20 M20.007 Xaa-His dipeptidase MER0303519 SOD_e00770
MH M20 M20.007 Xaa-His dipeptidase MER0303530
MH M20 M20.010 DapE peptidase MER0474866 SOD_i00200
MH M20 M20.015 YxeP putative peptidase MER0372053
MH M20 M20.015 YxeP putative peptidase MER0371793 hipO HMPREF0758_2917
MH M20 M20.974 acetylornithine deacetylase ArgE MER0851776 argE
MH M20 M20.974 acetylornithine deacetylase ArgE MER0369651
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0843535 amaB
MH M20 unassigned subfamily M20B unassigned peptidases MER0370794 SOD_c04880
MH M20 unassigned subfamily M20B unassigned peptidases MER0370085 HMPREF0758_0312
MH M20 unassigned subfamily M20B unassigned peptidases MER0370809 pepT HMPREF0758_2736
MH M20 unassigned family M20D unassigned peptidases MER0371936
MH M20 unassigned family M20D unassigned peptidases MER0373919
MH M20 unassigned family M20D unassigned peptidases MER0372088 hipO2 HMPREF0758_3779
MH M28 M28.005 IAP aminopeptidase MER0239328 SOD_f02310
MH M28 M28.005 IAP aminopeptidase MER0197149 iap HMPREF0758_0449
MJ M19 M19.003 dipeptidase AC MER0233727 acdP HMPREF0758_3732
MJ M19 M19.003 dipeptidase AC MER0341388
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0870574 hutI
MJ M38 unassigned family M38 unassigned peptidases MER0237904 iadA HMPREF0758_0458
MM M50 M50.004 RseP peptidase MER0892884 rseP
MO M23 M23.011 YebA peptidase MER0276934 yebA HMPREF0758_3432
MO M23 M23.011 YebA peptidase MER0387027
MO M23 M23.950 YibP g.p. (Escherichia sp.) MER0478880
MO M23 M23.950 YibP g.p. (Escherichia sp.) MER0478847
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0477727 nlpD
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0478176
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0478016
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0478314
MP M67 unassigned subfamily M67B unassigned peptidases MER0907600 vtaK2
MP M67 unassigned subfamily M67B unassigned peptidases MER0454647
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0332581 tldD HMPREF0758_1822
MU M103 M103.UNW family M103 non-peptidase homologues MER0238181
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405521 flhB
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0327142
PA S1 S01.260 B1598 peptidase MER0488599
PA S1 S01.260 B1598 peptidase MER0488616
PA S1 S01.273 DegP peptidase MER0327444
PA S1 S01.273 DegP peptidase MER0327439 degP HMPREF0758_0486
PA S1 unassigned subfamily S1C unassigned peptidases MER0327483 SOD_d02490
PA S1 unassigned subfamily S1C unassigned peptidases MER0327500 degQ HMPREF0758_1868
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0454631 SOD_c04590
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0456238
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0459407 asnB
PB T1 T01.006 HslV component of HslUV peptidase MER0232579 hslV HMPREF0758_1168
PB T1 T01.006 HslV component of HslUV peptidase MER0323486
PB T2 unassigned family T2 unassigned peptidases MER1096206 ybiK
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0307172 ggt HMPREF0758_0237
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0307296 ggt HMPREF0758_3694
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0379613
PB T3 unassigned family T3 unassigned peptidases MER1099466 ggt
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0436285
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0436311
PC C26 C26.957 GMP synthase MER0443041
PC C26 C26.960 TrpD protein (anthranilate synthase component II) MER0440413
PC C26 C26.960 TrpD protein (anthranilate synthase component II) MER0440680
PC C26 C26.961 PuuD protein MER0446328
PC C26 C26.961 PuuD protein MER0447161
PC C26 C26.964 CTP synthetase MER0448393
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0444962
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0445338
PC C26 unassigned family C26 unassigned peptidases MER0449576
PC C26 unassigned family C26 unassigned peptidases MER0445092
PC C26 unassigned family C26 unassigned peptidases MER0441278
PC C26 unassigned family C26 unassigned peptidases MER0441534
PC C26 unassigned family C26 unassigned peptidases MER0446345
PC C26 unassigned family C26 unassigned peptidases MER0451238
PC C56 C56.001 PfpI peptidase MER0310774 yhbO HMPREF0758_0777
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0385133 SOD_b01250
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0731650 HMPREF0758_3700
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0386026
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0385658 thiJ
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0386016 thiJ HMPREF0758_0214
PC S51 unassigned family S51 unassigned peptidases MER0314056 pepE HMPREF0758_1641
PE P1 P01.003 BapF peptidase (Pseudomonas sp.) MER0316932
SB S8 unassigned subfamily S8A unassigned peptidases MER0990907 pspB
SC S9 S09.010 oligopeptidase B MER0229655 ptrB HMPREF0758_3342
SC S9 S09.010 oligopeptidase B MER0489711 SOD_a06110
SC S9 S09.A43 YpfH protein (Escherichi coli) MER0208783
SC S9 unassigned subfamily S9A unassigned peptidases MER1295192
SC S9 unassigned subfamily S9A unassigned peptidases MER0325925
SC S9 unassigned subfamily S9A unassigned peptidases MER0325923
SC S9 unassigned subfamily S9C unassigned peptidases MER1000923 HMPREF0758_0852
SC S9 unassigned family S9 unassigned peptidases MER1000276 fghA
SC S33 S33.001 prolyl aminopeptidase MER0307837
SC S33 S33.001 prolyl aminopeptidase MER0307832 pip HMPREF0758_3344
SC S33 unassigned family S33 unassigned peptidases MER0209036 SOD_a06310
SC S33 unassigned family S33 unassigned peptidases MER0210226 SOD_a09720
SC S33 unassigned family S33 unassigned peptidases MER0209281
SC S33 unassigned family S33 unassigned peptidases MER0213237 SOD_i01150
SE S11 S11.002 murein-DD-endopeptidase MER0352514
SE S11 S11.002 murein-DD-endopeptidase MER0352667 pbpG2 HMPREF0758_4770
SE S11 S11.003 penicillin-binding protein 6 MER0351068 SOD_a03420
SE S11 S11.003 penicillin-binding protein 6 MER0351163 dacA2/dacC HMPREF0758_4524
SE S11 S11.007 penicillin-binding protein 4 (Neisseria-type) peptidase MER0352324
SE S11 S11.007 penicillin-binding protein 4 (Neisseria-type) peptidase MER0352637 pbpG HMPREF0758_3655
SE S11 S11.008 penicillin-binding protein 5-type peptidase MER0351379 SOD_e03250
SE S11 S11.008 penicillin-binding protein 5-type peptidase MER0351443 dacA3 HMPREF0758_4919
SE S11 S11.009 penicillin-binding protein 6b-type peptidase MER0351542
SE S11 S11.009 penicillin-binding protein 6b-type peptidase MER0351467 dacA HMPREF0758_3592
SE S12 unassigned family S12 unassigned peptidases MER1006152 ampH
SE S12 unassigned family S12 unassigned peptidases MER1005485 HMPREF0758_4034
SE S12 unassigned family S12 unassigned peptidases MER0354406
SE S12 unassigned family S12 unassigned peptidases MER0355306
SE S12 unassigned family S12 unassigned peptidases MER0354706 SOD_a10250
SE S12 unassigned family S12 unassigned peptidases MER0355515 ampC HMPREF0758_3355
SE S12 unassigned family S12 unassigned peptidases MER0355296 HMPREF0758_3810
SE S12 unassigned family S12 unassigned peptidases MER0354935 estB2 HMPREF0758_3837
SE S13 S13.001 D-Ala-D-Ala peptidase C MER0298433
SF S24 S24.001 repressor LexA MER0304351
SF S24 S24.003 UmuD protein MER0375432 umuD
SF S24 S24.003 UmuD protein MER0375418 umuD HMPREF0758_3146
SF S24 non-peptidase homologue family S24 non-peptidase homologues MER1033972 HMPREF0758_4922
SF S26 S26.001 signal peptidase I MER0264062
SF S26 S26.001 signal peptidase I MER0287663 lepB HMPREF0758_2454
SH S73 S73.001 gpO peptidase (Enterobacteria phage P2) MER0322589
SH S78 unassigned family S78 unassigned peptidases MER1085258 HMPREF0758_0038
SJ S16 S16.001 Lon-A peptidase MER0299652
SJ S16 unassigned family S16 unassigned peptidases MER1036919 radA
SJ S16 unassigned family S16 unassigned peptidases MER1032589 HMPREF0758_4340
SJ S16 unassigned family S16 unassigned peptidases MER1324065
SK S14 S14.001 peptidase Clp (type 1) MER0276549 clpP SOD_e01940
SK S14 S14.001 peptidase Clp (type 1) MER0358338
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER1015627 clpP
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0360119 clpP HMPREF0758_1751
SK S41 S41.001 C-terminal processing peptidase-1 MER0237948 prc HMPREF0758_4012
SK S41 S41.001 C-terminal processing peptidase-1 MER0288397 SOD_a07650
SK S49 unassigned subfamily S49A unassigned peptidases MER0297715 sppA HMPREF0758_3498
SK S49 unassigned subfamily S49B unassigned peptidases MER1070540 sohB
SK S49 unassigned subfamily S49B unassigned peptidases MER0297793
ST S54 S54.016 GlpG peptidase (Escherichia-type) MER0316096
ST S54 unassigned family S54 unassigned peptidases MER1083319 glpG
U- U32 unassigned family U32 unassigned peptidases MER0403966 SOD_i00890

GENOME ANALYSIS: Comparison with 15 completely sequenced genomes from genus Serratia
Family Comment
A39 significant presence (5 homologues)
C26 lineage specific expansion (16 homologues)
C40 lineage specific expansion (6 homologues)
C82 lineage specific expansion (5 homologues)
M3 lineage specific expansion (6 homologues)
M10 lineage specific expansion (4 homologues)
M15 lineage specific expansion (6 homologues)
M16 lineage specific expansion (5 homologues)
M19 significant presence (2 homologues)
M20 lineage specific expansion (16 homologues)
M23 lineage specific expansion (8 homologues)
M24 lineage specific expansion (7 homologues)
M67 significant presence (2 homologues)
S1 lineage specific expansion (6 homologues)
S8 significant decrease in homologues (1 homologues)
S11 lineage specific expansion (10 homologues)
S12 lineage specific expansion (8 homologues)
S73 significant presence (1 homologues)
S78 significant presence (1 homologues)
T3 lineage specific expansion (4 homologues)
U32 significant decrease in homologues (1 homologues)

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