Skip to main content

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:
Research:
perform basic research in molecular biology
Services:
offer vital services to scientists in the member states
Training
scientists, students and visitors at all levels
Transfer
and development of technology
Develop
new instruments and methods
Integrating
life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

  • EMBL
  • Barcelona
  • Hamburg
  • Heidelberg
  • Grenoble
  • Rome
  • Search
  • About us
  • Training
  • Research
  • Services
  • EMBL-EBI
Electron Microscopy Data Bank
Enter your search term(s) in the box below or build an advanced search query

Examples: 1001, Apoferritin, Tomography, Rossmann MG, 5A1A

advanced search

  • Home
  • Deposition
    • Deposit to EMDB/PDB
    • Deposit to EMPIAR

    • Guidance
      • Depositing composite maps to EMDB
  • Documentation
  • Resources
  • FTP Archive
  • REST API
  • About
  • Feedback
  • Share
    • Documentation
    • Resources
    • Deposition
      • Deposit to EMDB/PDB
      • Deposit to EMPIAR
    • FTP Archive
    • REST API
    • About
    • Feedback
    • Share

EMDB Solr Search Field Documentation

image_set_category_ft

Type or category of image set (e.g., raw images, tilt series).

Multivalue
Yes
Indexed
Yes
Stored
Yes

Name: Image set category (suggest)

Type: string_lc

Provenance: Depositor

Archive: EMPIAR

Accepted Values
  • micrographs - single frame
  • micrographs - multiframe
  • micrographs - tilt series
  • micrographs - focal pairs - unprocessed
  • micrographs - focal pairs - contrast inverted
  • picked particles - single frame - unprocessed
  • picked particles - multiframe - unprocessed
  • picked particles - single frame - processed
  • picked particles - multiframe - processed
  • tilt series
  • class averages
  • stitched maps
  • diffraction images
  • reconstructed volumes
  • subtomograms
Example queries:
Exact match:
image_set_category_ft:"micrographs - single frame"

Contains the word:
image_set_category_ft:micrographs

Partial match:
image_set_category_ft:micr*
image_set_category_ft:*rame

Has any value:
image_set_category_ft:[* TO *]

← Back to all fields

Quick links

  • EMDB Policies
  • EMDB News
  • Talks & Tutorials
  • Validation Analysis
  • Chart builder
  • Compare entries
  • EMICSS
  • EMDB Citations
  • EMPIAR
  • PDBe
  • BioImage Archive
  • EMDataResource
  • EM Navigator
  • 3D EM History

Recent Entries

(Show all)
<
EMD-65850
>
EMD-65850 [1/139]

Cryo-EM structure of the human UBR1 in complex with tryptophan

View Entry
<
>
EMD-66931 [2/139]

Cryo-EM structure of Hsp90(E47A)-FKBP8 complex

View Entry
<
>
EMD-55739 [3/139]

Structure of bacteriophage NO16

View Entry
<
>
EMD-75608 [4/139]

C3 Hexon Map of Phage Goslar

View Entry
<
>
EMD-75877 [5/139]

Cryo-EM structure of human DNMT3A R882H octadecamer

View Entry
<
>
EMD-56541 [6/139]

RNA polymerase II bound to RPAP2 and Gdown1 (Map B)

View Entry
<
>
EMD-57794 [7/139]

PLD-fold vaccinia virus endonuclease K4

View Entry
<
>
EMD-59065 [8/139]

Cryo-EM structure of Saccharomyces cerevisiae Erv14-Qdr2 complex in lipid nanodiscs (double Erv14 assembly)

View Entry
<
>
EMD-54697 [9/139]

Chlorophyll synthase in complex with the LHC-like protein HliD, GGPP-bound state

View Entry
<
>
EMD-75645 [10/139]

Tail Tube of Bacteriophage Goslar

View Entry
<
>
EMD-64515 [11/139]

Cryo-EM structure of thalidomide-organized CRL4-DDB1-CRBN-IKZF3(ZF2-ZF3)-UbcH5a-Ub ubiquitylation assembly

View Entry
<
>
EMD-75885 [12/139]

Cryo-EM structure of human DNMT3A homo-tetramer

View Entry
<
>
EMD-65915 [13/139]

Cryo-EM structure of AtABCC2 in ATP-bound, outward-facing state

View Entry
<
>
EMD-56542 [14/139]

RNA polymerase II bound to RPAP2 and Gdown1

View Entry
<
>
EMD-71580 [15/139]

Porcine ATP synthase with inhibitory protein IF1, DP-state

View Entry
<
>
EMD-59066 [16/139]

Cryo-EM structure of Saccharomyces cerevisiae Erv14-Qdr2 complex in lipid nanodiscs (single Erv14 assembly)

View Entry
<
>
EMD-72649 [17/139]

Leucine Rich Repeat Kinase 2 bound to GMP-PNP (inactive)

View Entry
<
>
EMD-54698 [18/139]

Chlorophyll synthase in complex with the LHC-like protein HliD, apo state, consensus map

View Entry
<
>
EMD-64658 [19/139]

Cryo-EM structure of lenalidomide-organized CRL4-DDB1-CRBN-IKZF3(ZF2-ZF3)-UbcH5a-Ub ubiquitylation assembly

View Entry
<
>
EMD-75646 [20/139]

C12 Portal Assembly of Bacteriophage Goslar

View Entry
<
>
EMD-75886 [21/139]

Cryo-EM structure of human DNMT3A homo-hexamer

View Entry
<
>
EMD-68655 [22/139]

Cryo-EM structure of Crimean-Congo hemorrhagic fever virus RNA polymerase in apo state

View Entry
<
>
EMD-77302 [23/139]

yeast 26S proteasome base assembly intermediate, Hsm3-Rpt1-Rpt2 (base-Hsm3-Nas6)

View Entry
<
>
EMD-58096 [24/139]

Dimer of pentameric MscL from Escherichia coli in nanodiscs

View Entry
<
>
EMD-59279 [25/139]

Cryo-EM structure of native, mature HERV-K pentameric capsomer

View Entry
<
>
EMD-72656 [26/139]

Leucine Rich Repeat Kinase 2 bound to GMP-PNP (active)

View Entry
<
>
EMD-64661 [27/139]

Cryo-EM structure of iberdomide-organized CRL4-DDB1-CRBN-IKZF3(ZF2-ZF3)-UbcH5a-Ub ubiquitylation assembly

View Entry
<
>
EMD-54699 [28/139]

Chlorophyll synthase in complex with the LHC-like protein HliD, GGPP-bound state, consensus map

View Entry
<
>
EMD-75649 [29/139]

Tail Sheath of Bacteriophage Goslar

View Entry
<
>
EMD-68657 [30/139]

Cryo-EM structure of Crimean-Congo hemorrhagic fever virus RNA polymerase in complex with suramin

View Entry
<
>
EMD-75910 [31/139]

Bacteriophage Goslar Peripheral Baseplate

View Entry
<
>
EMD-58252 [32/139]

Cryo-EM structure of Dopamine 3 receptor:Go complex bound to bitopic AB13-46A

View Entry
<
>
EMD-80706 [33/139]

Cryo-EM structure of Crimean-Congo hemorrhagic fever virus RNA polymerase in complex with 5'/3' vRNA dual-promotor

View Entry
<
>
EMD-59280 [34/139]

Cryo-EM structure of native, mature HERV-K hexameric capsomer

View Entry
<
>
EMD-77304 [35/139]

26S proteasome base assembly intermediate, Hsm3-Rpt1-Rpt2 (base-Rpn14-Hsm3-Nas6)

View Entry
<
>
EMD-64662 [36/139]

Cryo-EM structure of golcadomide-organized CRL4-DDB1-CRBN-IKZF3(ZF2-ZF3)-UbcH5a-Ub ubiquitylation assembly

View Entry
<
>
EMD-54700 [37/139]

Chlorophyll synthase in complex with the LHC-like protein HliD, ChlGx1-HliDx2 complex, apo sample

View Entry
<
>
EMD-72684 [38/139]

ALK focused cryo-EM map of TRI-611:ALK:CRBN/DDB1

View Entry
<
>
EMD-66494 [39/139]

high affinity IgG1 Fc variant in complex with Fc gamma receptor IIIA 158F

View Entry
<
>
EMD-55333 [40/139]

CryoEM structure of nucleoside diphosphate kinase (NDK) dodecamer 2 from Streptococcus pneumoniae

View Entry
<
>
EMD-73484 [41/139]

Focused refinement map on N-terminal half of LRRK2 GMPPNP (active)-Resolved EM

View Entry
<
>
EMD-68663 [42/139]

Cryo-EM structure of Crimean-Congo hemorrhagic fever virus RNA polymerase in complex with 5' vRNA promotor

View Entry
<
>
EMD-80707 [43/139]

Cryo-EM structure of Crimean-Congo hemorrhagic fever virus RNA polymerase in complex with the 5' vRNA promotor from the 5'/3' vRNA dual-promoter dataset

View Entry
<
>
EMD-75663 [44/139]

Penton Vertex Complex of Bacteriophage Goslar

View Entry
<
>
EMD-59302 [45/139]

Consensus EM map of in-cell structure of chloroplast ribosome of Chlamydomonas reinhardtii

View Entry
<
>
EMD-76130 [46/139]

Asymmetric Map of Bacteriophage Goslar

View Entry
<
>
EMD-52665 [47/139]

Cryo-EM structure of human IL-36gamma in complex with the IL-36R and IL-1RAcP ectodomains

View Entry
<
>
EMD-54701 [48/139]

Chlorophyll synthase in complex with the LHC-like protein HliD, ChlGx1-HliDx2 complex, GGPP sample

View Entry
<
>
EMD-68781 [49/139]

In situ cryo sub-tomogram average of axoneme in sperm flagella from Rgs22 knockout mice

View Entry
<
>
EMD-77307 [50/139]

yeast 26S proteasome base assembly intermediate, Rpn14-Rpt6

View Entry
<
>
EMD-55334 [51/139]

CryoEM structure of nucleoside diphosphate kinase (NDK) dodecamer 1 from Streptococcus pneumoniae

View Entry
<
>
EMD-80708 [52/139]

Cryo-EM structure of Crimean-Congo hemorrhagic fever virus RNA polymerase in the apo3 state from the 5'/3' vRNA dual-promoter dataset

View Entry
<
>
EMD-63413 [53/139]

The Cryo-EM Structure of DRT2

View Entry
<
>
EMD-72751 [54/139]

LRRK2 asymmetric dimer

View Entry
<
>
EMD-59303 [55/139]

Consensus EM map of the arch domain of in-cell structure of chloroplast ribosome in Chlamydomonas reinhardtii

View Entry
<
>
EMD-73485 [56/139]

Focused refinement map on N-terminal half of LRRK2 bound to GMPPNP (active)

View Entry
<
>
EMD-52705 [57/139]

Cryo-EM structure of PSII intermediate Psb27-PSII

View Entry
<
>
EMD-54707 [58/139]

Structure of Yeast RNA polymerase II elongation complex apo-state-II

View Entry
<
>
EMD-75688 [59/139]

Bacteriophage Goslar Tail Assembly

View Entry
<
>
EMD-69118 [60/139]

Structure of mouse DNMT3A-TCL1A complex

View Entry
<
>
EMD-77308 [61/139]

yeast 26S proteasome base assembly intermediate, Hsm3-Rpt1-Rpt2 (base-Hsm3-Nas6)

View Entry
<
>
EMD-80710 [62/139]

Cryo-EM structure of Crimean-Congo hemorrhagic fever virus RNA polymerase in the apo2 state from the 5'/3' vRNA dual-promoter dataset

View Entry
<
>
EMD-63414 [63/139]

The Cryo-EM Structure of DRT2

View Entry
<
>
EMD-59304 [64/139]

EM map of in-cell structure of the arch-moved chloroplast ribosome in Chlamydomonas reinhardtii

View Entry
<
>
EMD-72756 [65/139]

Leucine Rich Repeat Kinase 2 activate state (Apo ROC state 2)

View Entry
<
>
EMD-52706 [66/139]

Cryo-EM structure of PSII intermediate Psb32-PSII

View Entry
<
>
EMD-73487 [67/139]

LRRK2 bound to GMP-PNP (inactive)

View Entry
<
>
EMD-65849 [68/139]

Cryo-EM structure of the human UBR2 N-domain in complex with tryptophan

View Entry
<
>
EMD-73688 [69/139]

Cryo-EM structure of VVD-908 NLRP3 complex

View Entry
<
>
EMD-54753 [70/139]

80S ribosome of young S. cerevisiae cells (day 0) - polysome fraction

View Entry
<
>
EMD-75729 [71/139]

Mouse monoclonal antibody A2 in complex with rabies virus glycoprotein

View Entry
<
>
EMD-77338 [72/139]

yeast 26S proteasome base assembly intermediate, base-Nas2-Rpn14-Hsm3-Nas6

View Entry
<
>
EMD-57643 [73/139]

Dynein-Dynactin-RAB11FIP3 complex - composite

View Entry
<
>
EMD-48426 [74/139]

Cryo-EM local map of six VRC35 Fabs bound to influenza H3N2 Victoria 2011 hemagglutinin head

View Entry
<
>
EMD-59305 [75/139]

EM map of in-cell structure of the arch-stable chloroplast ribosome in Chlamydomonas reinhardtii

View Entry
<
>
EMD-72762 [76/139]

Leucine Rich Repeat Kinase 2 activate state (Apo ROC state 1)

View Entry
<
>
EMD-52772 [77/139]

Visualization of the full-length Tse5-CT toxic fragment inside T6SS-dependent Tse5 effector

View Entry
<
>
EMD-73491 [78/139]

Focused refinement map on LRRK2 bound to GMPPNP (inactive)

View Entry
<
>
EMD-73769 [79/139]

CryoEM Structure of VEEV VLP treated with 0.5 biFABs/Spike

View Entry
<
>
EMD-54754 [80/139]

80S ribosome of young S. cerevisiae cells (day 0) - polysome fraction digested with RNAse I

View Entry
<
>
EMD-77350 [81/139]

yeast 26S proteasome base assembly intermediate, base-Nas2-Rpn14-Hsm3-Nas6

View Entry
<
>
EMD-48427 [82/139]

Cryo-EM local map of dimeric VRC35 Fabs bound to N-linked glycans N126, N165, and N246 on influenza H3N2 Victoria 2011 hemagglutinin head

View Entry
<
>
EMD-59306 [83/139]

EM map of in-cell structure of the membrane-bound chloroplast ribosome in Chlamydomonas reinhardtii

View Entry
<
>
EMD-72768 [84/139]

Leucine Rich Repeat Kinase 2 R1441C mutant (active)

View Entry
<
>
EMD-54643 [85/139]

Cryo-EM structure of yeast EMC:Spf1 insertase:dislocase complex in digitonin

View Entry
<
>
EMD-73492 [86/139]

Focused refinement map on LRRK2 bound to GMPPNP (inactive) Resolve EM

View Entry
<
>
EMD-54755 [87/139]

80S ribosome of aged S. cerevisiae cells (day 3) - polysome fraction

View Entry
<
>
EMD-75794 [88/139]

Bacteriophage Goslar Collar

View Entry
<
>
EMD-56049 [89/139]

Cryo-EM Structure of the oligomeric LPOR:Chlide:NADPH Complexes RF-25

View Entry
<
>
EMD-77358 [90/139]

yeast 26S proteasome base assembly intermediate, base-Nas2-Rpn14-Hsm3-Nas6

View Entry
<
>
EMD-49628 [91/139]

Composite map of three pairs of dimeric VRC36 Fabs bound to HIV-1 BG505.T332N DS-SOSIP.664 Env trimer

View Entry
<
>
EMD-54644 [92/139]

Locally refined map of CRBN TBD bound to spirocyclic ligand in the open conformation

View Entry
<
>
EMD-73495 [93/139]

Focused refinement map of LRRK2 APO state 2

View Entry
<
>
EMD-75811 [94/139]

Mouse monoclonal antibody A11 in complex with rabies virus glycoprotein

View Entry
<
>
EMD-76140 [95/139]

Cryo-EM structure of Candida albicans fluoride channel FEX in complex with Fab fragment in LiCl

View Entry
<
>
EMD-56124 [96/139]

Asp2Cas12l-sgRNA bound to target DNA

View Entry
<
>
EMD-77359 [97/139]

yeast 26S proteasome base assembly intermediate, base-Nas2-Rpn14-Hsm3-Nas6

View Entry
<
>
EMD-58734 [98/139]

Structure of CDK11-cyclin L-SAP30BP in complex with IACS-054647

View Entry
<
>
EMD-49633 [99/139]

Global map of six VRC36 Fabs bound to HIV-1 BG505.T332N DS-SOSIP.664 Env trimer

View Entry
<
>
EMD-54648 [100/139]

Cryo-EM structure of endogenous yeast EMC in complex with Spf1 in digitonin: EMC locally refined

View Entry
<
>
EMD-73496 [101/139]

Focused refinement map of LRRK2 APO state 1

View Entry
<
>
EMD-55728 [102/139]

Structure of bacteriophage NO16

View Entry
<
>
EMD-56538 [103/139]

Structure of the human two pore domain potassium ion channel TASK-3 L122V mutant (K2P9.1)

View Entry
<
>
EMD-75813 [104/139]

Human monoclonal antibodies 4C12 and 4H3 in complex with rabies virus glycoprotein

View Entry
<
>
EMD-59064 [105/139]

Cryo-EM structure of Saccharomyces cerevisiae Erv14-Qdr2 complex in detergent

View Entry
<
>
EMD-49696 [106/139]

Subtomogram Average of the Nipah Virus Matrix Lattice in Complex with Human Cell Membrane inside Virus-Like-Particles

View Entry
<
>
EMD-73497 [107/139]

Focused map of LRRK2 bound to G10 (top)

View Entry
<
>
EMD-74755 [108/139]

CryoEM structure of H5N1 A/Texas/37/2024 HA bound to Fab H91

View Entry
<
>
EMD-75814 [109/139]

Human monoclonal antibody 8C5 in complex with rabies virus glycoprotein

View Entry
<
>
EMD-73499 [110/139]

Focused map of LRRK2 bound to G10 (WD40-DARPin)

View Entry
<
>
EMD-74798 [111/139]

Cryo-EM local density map of VRC35 Fab bound to N-linked glycans on the SARS-CoV-2 LP.8.1.9 spike protein

View Entry
<
>
EMD-75815 [112/139]

Human Monoclonal Antibody RVC68 in complex with rabies virus glycoprotein

View Entry
<
>
EMD-72940 [113/139]

LRRK2 activated (flexible C-terminus)

View Entry
<
>
EMD-73501 [114/139]

Focused map of LRRK2 R1441C (active)

View Entry
<
>
EMD-74801 [115/139]

Cryo-EM map of VRC35 Fab bound to the SARS-CoV-2 LP.8.1.9 spike protein

View Entry
<
>
EMD-75816 [116/139]

Monoclonal antibodies A4, 7E8, and RVC68 in complex with rabies virus glycoprotein

View Entry
<
>
EMD-76216 [117/139]

Structure of AGO2 RISC with a 16-nt target

View Entry
<
>
EMD-77868 [118/139]

Geobacillus stearothermophilus RNase P holoenzyme in complex with precursor tRNA at 2 mM MgCl2

View Entry
<
>
EMD-72073 [119/139]

heterotrimeric ENaC channel complex PPK1/PPK26/PPK26

View Entry
<
>
EMD-72941 [120/139]

Leucine Rich Repeat Kinase 2 bound to GDP (from GMPPNP data)

View Entry
<
>
EMD-73502 [121/139]

Focused map of LRRK2 R1441C (active) ResolveEM

View Entry
<
>
EMD-74843 [122/139]

Cryo-EM map of VRC35 Fab bound to the Lassa virus glycoprotein complex

View Entry
<
>
EMD-75817 [123/139]

Human monoclonal antibodies 7E8 and 10H5 in complex with rabies virus glycoprotein

View Entry
<
>
EMD-78467 [124/139]

tC19Z RNA polymerase ribozyme, apo state

View Entry
<
>
EMD-72074 [125/139]

heterotrimeric ENaC channel complex PPK1/PPK26/PPK26 with Vulnusin

View Entry
<
>
EMD-72978 [126/139]

Leucine Rich Repeat LRRK2 (GDP data)

View Entry
<
>
EMD-75829 [127/139]

Bacteriophage Goslar Baseplate

View Entry
<
>
EMD-78557 [128/139]

DeepEMHancer Map of H4K12me1 Nucleosome

View Entry
<
>
EMD-72163 [129/139]

Rad55-Rad57-SHU-Rad51-Rad51 bound to ssDNA with AMP-PNP

View Entry
<
>
EMD-72982 [130/139]

Leucine Rich Repeat Kinase 2 active state (Apo state 3)

View Entry
<
>
EMD-75836 [131/139]

Bacteriophage Goslar Capsid Asymmetric Unit

View Entry
<
>
EMD-78594 [132/139]

Cryo-EM Structure of GTP Cyclohydrolase I from Candida albicans at 2.6 A

View Entry
<
>
EMD-72185 [133/139]

Cryo-EM structure of designed Orb2 amyloid (LVLVF, polymorph 3)

View Entry
<
>
EMD-75837 [134/139]

Bacteriophage Goslar Empty Capsid Asymmetric Unit

View Entry
<
>
EMD-72202 [135/139]

CryoEM structure of beta2-adrenergic receptor dimer mediated by a biased allosteric modulator in lipid nanodisc

View Entry
<
>
EMD-75875 [136/139]

Cryo-EM consensus map of human DNMT3A homo-hexamer

View Entry
<
>
EMD-75876 [137/139]

Cryo-EM structure of human DNMT3A R882H decamer

View Entry
<
>
EMD-63415 [138/139]

The Cryo-EM Structure of DRT2

View Entry
<
>
EMD-54652 [139/139]

Cryo-EM structure of endogenous yeast EMC in complex with Spf1 in digitonin

View Entry
×

Searching in EMDBHelp

Field:
Search Filter
×

Share EMDB

EMDB
is a member of
wwPDB wwPDB Foundation
Licensing
Data preservation
EMBL-EBI

EMBL-EBI

Intranet for staff
Services
  • By topic
  • By name (A-Z)
  • Help & Support
Research
  • Publications
  • Research groups
  • Postdocs & PhDs
Training
  • Train at EBI
  • Train outside EBI
  • Train online
  • Contact organisers
Industry
  • Members Area
  • Workshops
  • SME Forum
  • Contact Industry programme
About
  • Contact us
  • Events
  • Jobs
  • News
  • People & groups

EMBL-EBI, Wellcome Genome Campus, Hinxton, Cambridgeshire, CB10 1SD, UK. +44 (0)1223 49 44 44

Copyright © EMBL 2019 | EMBL-EBI is part of the European Molecular Biology Laboratory | Terms of use