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subtomograms

Filter By

Current Database

  • EMDB [30]
  • EMPIAR [10]

Current status

  • REL [40]

Sample type

  • Cell [14]
  • Complex [10]
  • Protein [5]
  • Cellular component [4]
  • Sample [4]
  • Virus [2]

Organism

  • Homo sapiens [20]
  • Rattus norvegicus [5]
  • Adeno-associated dependoparvovirus b [3]
  • Mus musculus [1]
  • Helicobacter pylori [1]
  • Chlamydomonas reinhardtii [1]

EM Method

  • Subtomogram averaging [30]

Resolution

  • ≥ 6Å and < 8Å [5]
  • ≥ 8Å and < 12Å [9]
  • ≥ 12Å and < 16Å [4]
  • ≥ 16Å and < 20Å [2]
  • ≥ 20Å and < 30Å [4]
  • ≥ 30Å [6]

Model molecular weight

  • 250-500 kDa [1]
  • 1-2 MDa [4]

Release Date

  • 2026 [15]
  • 2025 [1]
  • 2024 [4]
  • 2023 [1]
  • 2022 [7]
  • 2021 [1]
  • 2018 [5]
  • 2017 [1]
  • 2016 [1]
  • 2014 [1]
  • 2010 [2]
  • 2009 [1]

Author by name

  • Cuylen-haering S [13]
  • Fung HKH [13]
  • Hayashi Y [13]
  • Mahamid J [13]
  • Muller CW [13]
  • Zhao X [13]
  • Mueller CW [12]
  • Baumeister W [6]
  • Beck F [5]
  • Edbauer D [5]
  • Fernandez-busnadiego R [5]
  • Frottin F [5]
  • Guo Q [5]
  • Hartl FU [5]
  • Hartmann H [5]
  • Hipp MS [5]
  • Lehmer C [5]
  • Martinez-sanchez A [5]
  • Perez-berlanga M [5]
  • Rudack T [5]
  • Chapman MS [4]
  • Hu G [4]
  • Hu GQ [4]
  • Silveria MA [4]
  • Stagg SM [4]
  • Zane GM [4]
  • Chiu W [2]
  • Danev R [2]
  • Engel BD [2]
  • Ishikawa T [2]
  • Jakana J [2]
  • King J [2]
  • Liu X [2]
  • Murata K [2]
  • Nagayama K [2]
  • Righetto RD [2]
  • Schmid MF [2]
  • Al-amoudi A [1]
  • Alford LM [1]
  • Alvarez Viar G [1]
  • Betts MJ [1]
  • Blikstad C [1]
  • Bondy AL [1]
  • Bui KH [1]
  • Cai S [1]
  • Castano Diez D [1]
  • Chong WG [1]
  • Davis J.H. [1]
  • Dietrich HM [1]
  • Diez DC [1]
  • Dohrke JN [1]
  • Dutcher S [1]
  • Dutcher SK [1]
  • Eltsov M [1]
  • Erdmann PS [1]
  • Franco AT [1]
  • Frangakis AS [1]
  • Gan L [1]
  • Geimer S [1]
  • Grubmüller H [1]
  • Guichard P [1]
  • Hallberg BM [1]
  • Hamel V [1]
  • Harastani M [1]
  • Howe A [1]
  • Huang YX [1]
  • Hwang J [1]
  • Ide T [1]
  • Igaev M [1]
  • Ilgen P [1]
  • Imai Y [1]
  • Inaba K [1]
  • Jakobs S [1]
  • James N [1]
  • Jensen GJ [1]
  • Jonic S [1]
  • Jordan MA [1]
  • Kalutskii M [1]
  • King SM [1]
  • Klena N [1]
  • Kon T [1]
  • Kumar A [1]
  • Lange F [1]
  • Laughlin T [1]
  • Le Vasseur M [1]
  • Lee JKE [1]
  • Leforestier A [1]
  • Lin WT [1]
  • Liu J [1]
  • Ma OX [1]
  • Metskas LA [1]
  • Müller V [1]
  • Ni T [1]
  • Noliyanda J [1]
  • Obbineni JM [1]
  • Ofverstedt LG [1]
  • Oltrogge LM [1]
  • Ortega D [1]
  • Owa M [1]
  • Pacheco-fiallos B [1]

Author by ORCID

  • Chapman MS [4]
  • Stagg SM [4]

Journal

  • SCIENCE [14]
  • CELL [5]
  • J VIROL [4]
  • NATURE [3]
  • BIORXIV [2]
  • STRUCTURE [2]
  • CYTOSKELETON [1]
  • FRONT MOL BIOSCI [1]
  • J BACTERIOL [1]
  • NAT CELL BIOL [1]
  • NAT COMMUN [1]
  • PLOS GENET [1]
  • PLOS ONE [1]
  • PNAS [1]
  • TO BE PUBLISHED [1]

Software

  • RELION [19]
  • WARP [14]
  • PYTOM [5]
  • TOM TOOLBOX [5]
  • EMAN [4]
  • IMOD [2]
  • BSOFT [1]
  • CTFFIND [1]
  • DYNAMO [1]
  • FEI TOMOGRAPHY [1]
  • SPIDER [1]
  • XMIPP [1]

Microscope

  • TFS KRIOS [14]
  • FEI TITAN KRIOS [10]
  • JEOL 2200FS [3]
  • FEI POLARA 300 [1]
  • FEI TECNAI F20 [1]
  • FEI TECNAI F30 [1]

Electron Source

  • FIELD EMISSION GUN [30]

Film or detector model

  • GATAN K3 6K X 4K [17]
  • GATAN K2 SUMMIT 4K X 4K [6]
  • FEI FALCON III 4K X 4K [1]
  • GATAN K3 BIOQUANTUM 6K X 4K [1]
  • GATAN ULTRASCAN 1000 2K X 2K [1]
  • GENERIC CCD [1]
  • TVIPS TEMCAM-F416 4K X 4K [1]

EMPIAR Experiment type

  • EMDB [8]
  • FIB-SEM [1]
  • SSET [1]

EMPIAR Image category

  • SUBTOMOGRAMS [7]
  • MICROGRAPHS - MULTIFRAME [5]
  • TILT SERIES [5]
  • RECONSTRUCTED VOLUMES [4]
  • MICROGRAPHS - SINGLE FRAME [1]
  • PICKED PARTICLES - MULTIFRAME - PROCESSED [1]
  • PICKED PARTICLES - MULTIFRAME - UNPROCESSED [1]

External links

  • EMDB [8]
  • AlphaFold DB [5]
  • Gene Ontology [5]
  • InterPro [5]
  • PDB [5]
  • PDBe-Kb [5]
  • Pfam [5]
  • UniProt [5]
  • Complex Portal [4]
  • SCOP2 [1]
Sort by: Download
Showing 1 - 10 of 40. Page 1 of 4
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EMD-83611
Download Map
3D View
Synaptotagmin-1_molecules_from_the_0_mM_Ca2_Cluster1
CryoEM
Release date: Oct. 7, 2026
Resolution: 10.0 Å
EM Method: Subtomogram averaging

Purba ER, Ofverstedt LG, Skoglund U

To Be Published

EMD-59068
Download Map
3D View
In-cell structure of the human pre-60S state A
CryoEM
Release date: Sept. 23, 2026
Resolution: 10.9 Å
EM Method: Subtomogram averaging

Zhao X, Hayashi Y, Fung HKH, Cuylen-Haering S, Mahamid J, Muller CW

Science (2026) pp. eaej0483-eaej0483 [ Pubmed: 42784657 DOI: doi:10.1126/science.aej0483 ]

EMD-59072
Download Map
3D View
In-cell structure of the human pre-60S state E
CryoEM
Release date: Sept. 23, 2026
Resolution: 8.9 Å
EM Method: Subtomogram averaging

Zhao X, Hayashi Y, Fung HKH, Cuylen-Haering S, Mahamid J, Muller CW

Science (2026) pp. eaej0483-eaej0483 [ Pubmed: 42784657 DOI: doi:10.1126/science.aej0483 ]

EMD-59073
Download Map
3D View
In-cell structure of the human pre-60S state F
CryoEM
Release date: Sept. 23, 2026
Resolution: 8.4 Å
EM Method: Subtomogram averaging

Zhao X, Hayashi Y, Fung HKH, Cuylen-Haering S, Mahamid J, Muller CW

Science (2026) pp. eaej0483-eaej0483 [ Pubmed: 42784657 DOI: doi:10.1126/science.aej0483 ]

EMD-59075
Download Map
3D View
In-cell structure of the human pre-60S state G
CryoEM
Release date: Sept. 23, 2026
Resolution: 9.5 Å
EM Method: Subtomogram averaging

Zhao X, Hayashi Y, Fung HKH, Cuylen-Haering S, Mahamid J, Muller CW

Science (2026) pp. eaej0483-eaej0483 [ Pubmed: 42784657 DOI: doi:10.1126/science.aej0483 ]

EMD-59078
Download Map
3D View
In-cell structure of the human SSU processome state postA1-exo
CryoEM
Release date: Sept. 23, 2026
Resolution: 14.1 Å
EM Method: Subtomogram averaging

Zhao X, Hayashi Y, Fung HKH, Cuylen-Haering S, Mahamid J, Muller CW

Science (2026) pp. eaej0483-eaej0483 [ Pubmed: 42784657 DOI: doi:10.1126/science.aej0483 ]

EMD-59079
Download Map
3D View
In-cell structure of the human SSU processome state postA1
CryoEM
Release date: Sept. 23, 2026
Resolution: 10.8 Å
EM Method: Subtomogram averaging

Zhao X, Hayashi Y, Fung HKH, Cuylen-Haering S, Mahamid J, Muller CW

Science (2026) pp. eaej0483-eaej0483 [ Pubmed: 42784657 DOI: doi:10.1126/science.aej0483 ]

EMD-59080
Download Map
3D View
In-cell structure of the human pre-60S state Ipre
CryoEM
Release date: Sept. 23, 2026
Resolution: 8.8 Å
EM Method: Subtomogram averaging

Zhao X, Hayashi Y, Fung HKH, Cuylen-Haering S, Mahamid J, Muller CW

Science (2026) pp. eaej0483-eaej0483 [ Pubmed: 42784657 DOI: doi:10.1126/science.aej0483 ]

EMD-59081
Download Map
3D View
In-cell structure of the human pre-60S state Ipost
CryoEM
Release date: Sept. 23, 2026
Resolution: 8.8 Å
EM Method: Subtomogram averaging

Zhao X, Hayashi Y, Fung HKH, Cuylen-Haering S, Mahamid J, Muller CW

Science (2026) pp. eaej0483-eaej0483 [ Pubmed: 42784657 DOI: doi:10.1126/science.aej0483 ]

EMD-59082
Download Map
3D View
In-cell structure of the human pre-60S state J
CryoEM
Release date: Sept. 23, 2026
Resolution: 7.1 Å
EM Method: Subtomogram averaging

Zhao X, Hayashi Y, Fung HKH, Cuylen-Haering S, Mahamid J, Muller CW

Science (2026) pp. eaej0483-eaej0483 [ Pubmed: 42784657 DOI: doi:10.1126/science.aej0483 ]

Sort by: Download
Showing 1 - 10 of 40. Page 1 of 4
Display:
Statistics
×

Download



Preview 10 entries View All Download file

Filter By

Current Database

  • EMDB [30]
  • EMPIAR [10]

Current status

  • REL [40]

Sample type

  • Cell [14]
  • Complex [10]
  • Protein [5]
  • Cellular component [4]
  • Sample [4]
  • Virus [2]

Organism

  • Homo sapiens [20]
  • Rattus norvegicus [5]
  • Adeno-associated dependoparvovirus b [3]
  • Mus musculus [1]
  • Helicobacter pylori [1]
  • Chlamydomonas reinhardtii [1]

EM Method

  • Subtomogram averaging [30]

Resolution

  • ≥ 6Å and < 8Å [5]
  • ≥ 8Å and < 12Å [9]
  • ≥ 12Å and < 16Å [4]
  • ≥ 16Å and < 20Å [2]
  • ≥ 20Å and < 30Å [4]
  • ≥ 30Å [6]

Model molecular weight

  • 250-500 kDa [1]
  • 1-2 MDa [4]

Release Date

  • 2026 [15]
  • 2025 [1]
  • 2024 [4]
  • 2023 [1]
  • 2022 [7]
  • 2021 [1]
  • 2018 [5]
  • 2017 [1]
  • 2016 [1]
  • 2014 [1]
  • 2010 [2]
  • 2009 [1]

Author by name

  • Cuylen-haering S [13]
  • Fung HKH [13]
  • Hayashi Y [13]
  • Mahamid J [13]
  • Muller CW [13]
  • Zhao X [13]
  • Mueller CW [12]
  • Baumeister W [6]
  • Beck F [5]
  • Edbauer D [5]
  • Fernandez-busnadiego R [5]
  • Frottin F [5]
  • Guo Q [5]
  • Hartl FU [5]
  • Hartmann H [5]
  • Hipp MS [5]
  • Lehmer C [5]
  • Martinez-sanchez A [5]
  • Perez-berlanga M [5]
  • Rudack T [5]
  • Chapman MS [4]
  • Hu G [4]
  • Hu GQ [4]
  • Silveria MA [4]
  • Stagg SM [4]
  • Zane GM [4]
  • Chiu W [2]
  • Danev R [2]
  • Engel BD [2]
  • Ishikawa T [2]
  • Jakana J [2]
  • King J [2]
  • Liu X [2]
  • Murata K [2]
  • Nagayama K [2]
  • Righetto RD [2]
  • Schmid MF [2]
  • Al-amoudi A [1]
  • Alford LM [1]
  • Alvarez Viar G [1]
  • Betts MJ [1]
  • Blikstad C [1]
  • Bondy AL [1]
  • Bui KH [1]
  • Cai S [1]
  • Castano Diez D [1]
  • Chong WG [1]
  • Davis J.H. [1]
  • Dietrich HM [1]
  • Diez DC [1]
  • Dohrke JN [1]
  • Dutcher S [1]
  • Dutcher SK [1]
  • Eltsov M [1]
  • Erdmann PS [1]
  • Franco AT [1]
  • Frangakis AS [1]
  • Gan L [1]
  • Geimer S [1]
  • Grubmüller H [1]
  • Guichard P [1]
  • Hallberg BM [1]
  • Hamel V [1]
  • Harastani M [1]
  • Howe A [1]
  • Huang YX [1]
  • Hwang J [1]
  • Ide T [1]
  • Igaev M [1]
  • Ilgen P [1]
  • Imai Y [1]
  • Inaba K [1]
  • Jakobs S [1]
  • James N [1]
  • Jensen GJ [1]
  • Jonic S [1]
  • Jordan MA [1]
  • Kalutskii M [1]
  • King SM [1]
  • Klena N [1]
  • Kon T [1]
  • Kumar A [1]
  • Lange F [1]
  • Laughlin T [1]
  • Le Vasseur M [1]
  • Lee JKE [1]
  • Leforestier A [1]
  • Lin WT [1]
  • Liu J [1]
  • Ma OX [1]
  • Metskas LA [1]
  • Müller V [1]
  • Ni T [1]
  • Noliyanda J [1]
  • Obbineni JM [1]
  • Ofverstedt LG [1]
  • Oltrogge LM [1]
  • Ortega D [1]
  • Owa M [1]
  • Pacheco-fiallos B [1]

Author by ORCID

  • Chapman MS [4]
  • Stagg SM [4]

Journal

  • SCIENCE [14]
  • CELL [5]
  • J VIROL [4]
  • NATURE [3]
  • BIORXIV [2]
  • STRUCTURE [2]
  • CYTOSKELETON [1]
  • FRONT MOL BIOSCI [1]
  • J BACTERIOL [1]
  • NAT CELL BIOL [1]
  • NAT COMMUN [1]
  • PLOS GENET [1]
  • PLOS ONE [1]
  • PNAS [1]
  • TO BE PUBLISHED [1]

Software

  • RELION [19]
  • WARP [14]
  • PYTOM [5]
  • TOM TOOLBOX [5]
  • EMAN [4]
  • IMOD [2]
  • BSOFT [1]
  • CTFFIND [1]
  • DYNAMO [1]
  • FEI TOMOGRAPHY [1]
  • SPIDER [1]
  • XMIPP [1]

Microscope

  • TFS KRIOS [14]
  • FEI TITAN KRIOS [10]
  • JEOL 2200FS [3]
  • FEI POLARA 300 [1]
  • FEI TECNAI F20 [1]
  • FEI TECNAI F30 [1]

Electron Source

  • FIELD EMISSION GUN [30]

Film or detector model

  • GATAN K3 6K X 4K [17]
  • GATAN K2 SUMMIT 4K X 4K [6]
  • FEI FALCON III 4K X 4K [1]
  • GATAN K3 BIOQUANTUM 6K X 4K [1]
  • GATAN ULTRASCAN 1000 2K X 2K [1]
  • GENERIC CCD [1]
  • TVIPS TEMCAM-F416 4K X 4K [1]

EMPIAR Experiment type

  • EMDB [8]
  • FIB-SEM [1]
  • SSET [1]

EMPIAR Image category

  • SUBTOMOGRAMS [7]
  • MICROGRAPHS - MULTIFRAME [5]
  • TILT SERIES [5]
  • RECONSTRUCTED VOLUMES [4]
  • MICROGRAPHS - SINGLE FRAME [1]
  • PICKED PARTICLES - MULTIFRAME - PROCESSED [1]
  • PICKED PARTICLES - MULTIFRAME - UNPROCESSED [1]

External links

  • EMDB [8]
  • AlphaFold DB [5]
  • Gene Ontology [5]
  • InterPro [5]
  • PDB [5]
  • PDBe-Kb [5]
  • Pfam [5]
  • UniProt [5]
  • Complex Portal [4]
  • SCOP2 [1]