Pantoea sp. At-9b

Taxonomy
Taxonomy database identifier: 592316
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Enterobacteriales
Family Enterobacteriaceae
Genus Pantoea
Species sp. At-9b
Peptidase View peptidase sequences from Pantoea sp. At-9b
Count of known and putative peptidases: 131, non-peptidase homologues 63
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
A- A39 unassigned family A39 unassigned peptidases MER1375665
AC A8 A08.001 signal peptidase II MER0231942 lspA Pat9b_0623
AD A24 unassigned subfamily A24A unassigned peptidases MER0232083 Pat9b_5650
AE A31 A31.003 HycI peptidase MER0232090 Pat9b_5792
AF A26 A26.003 plasminogen activator Pla MER0232005 Pat9b_2303
CA C39 C39.005 colicin V processing peptidase MER0231970 Pat9b_1502
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0231959 pcp Pat9b_1108
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0243816 Pat9b_0817
CL C82 C82.A04 YbiS protein (Escherichia coli) MER0461541 Pat9b_1185
CL C82 C82.A05 YcfS protein (Escherichia coli) MER0461542 Pat9b_1672
CO C40 C40.004 spr peptidase MER0232014 Pat9b_2659
CO C40 C40.A01 NlpC protein (Escherichia coli) MER0231976 Pat9b_1655
CO C40 C40.A01 NlpC protein (Escherichia coli) MER0232075 Pat9b_5504
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0231978 Pat9b_1681
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0231967 Pat9b_1350
MA M3 M03.004 oligopeptidase A MER0232054 Pat9b_3763
MA M3 M03.005 peptidyl-dipeptidase Dcp MER0231989 Pat9b_1956
MA M4 M04.025 protealysin MER0232022 Pat9b_2921
MA M32 M32.003 TcMCP1 carboxypeptidase MER0231994 Pat9b_2017
MA M41 M41.001 FtsH peptidase MER0231937 ftsH Pat9b_0502
MA M48 M48.002 HtpX peptidase MER0232001 htpX Pat9b_2247
MA M48 M48.022 low osmolarity induced peptidase MER0232030 Pat9b_3205
MA M48 M48.023 BepA (Escherichia coli) MER0232020 Pat9b_2893
MA M90 M90.001 MtfA peptidase MER0228042 Pat9b_2419
MC M14 M14.034 murein peptide amidase MpaA MER0231995 Pat9b_2037
MD M15 non-peptidase homologue family M15 non-peptidase homologues MER0231966 Pat9b_1344
MD M15 unassigned subfamily M15D unassigned peptidases MER0232069 Pat9b_5276
MD M74 M74.001 murein endopeptidase MER0232017 mepA Pat9b_2781
ME M16 M16.001 pitrilysin MER0232028 Pat9b_3125
ME M16 M16.006 pqqF protein MER0231979 Pat9b_1792
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0231924 Pat9b_0130
ME M16 unassigned subfamily M16B unassigned peptidases MER0231894 Pat9b_4688
MF M17 M17.003 PepA aminopeptidase MER0231940 pepA Pat9b_0537
MF M17 M17.004 PepB aminopeptidase MER0232023 pepB Pat9b_2936
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0231945 map Pat9b_0748
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0232093 map Pat9b_5864
MG M24 M24.003 Xaa-Pro dipeptidase (bacteria-type) MER0231929 pepQ Pat9b_0195
MG M24 M24.004 aminopeptidase P (bacteria) MER0232029 Pat9b_3188
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0231961 Pat9b_1201
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0232078 Pat9b_5557
MG M24 unassigned subfamily M24B unassigned peptidases MER0414741
MH M20 M20.003 peptidase T MER0231971 pepT Pat9b_1514
MH M20 M20.007 Xaa-His dipeptidase MER0231950 Pat9b_0823
MH M20 M20.010 DapE peptidase MER0232019 dapE Pat9b_2873
MH M20 M20.015 YxeP putative peptidase MER0232088 Pat9b_5722
MH M20 M20.020 p-aminobenzoyl-glutamate hydrolase subunit A MER0231933 Pat9b_0353
MH M20 M20.974 acetylornithine deacetylase ArgE MER0232062 argE Pat9b_3855
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0231932 Pat9b_0352
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0231981 Pat9b_1824
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0231984 Pat9b_1909
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0231900 Pat9b_5048
MH M20 unassigned subfamily M20A unassigned peptidases MER0232072 Pat9b_5452
MH M20 unassigned subfamily M20A unassigned peptidases MER0232077 Pat9b_5555
MH M20 unassigned subfamily M20B unassigned peptidases MER0231992 Pat9b_1997
MH M20 unassigned family M20D unassigned peptidases MER0231962 Pat9b_1233
MH M20 unassigned family M20D unassigned peptidases MER0232008 Pat9b_2477
MH M20 unassigned family M20D unassigned peptidases MER0232042 Pat9b_3332
MH M20 unassigned family M20D unassigned peptidases MER0232066 Pat9b_5207
MH M20 unassigned family M20D unassigned peptidases MER0232068 Pat9b_5222
MH M20 unassigned family M20D unassigned peptidases MER0232082 Pat9b_5604
MH M20 unassigned family M20D unassigned peptidases MER0232084 Pat9b_5700
MH M20 unassigned family M20D unassigned peptidases MER0232086 Pat9b_5709
MH M20 unassigned family M20D unassigned peptidases MER0232092 Pat9b_5808
MH M20 unassigned family M20D unassigned peptidases MER0231899 Pat9b_4975
MH M20 unassigned family M20D unassigned peptidases MER0231891 Pat9b_4579
MH M20 unassigned family M20 unassigned peptidases MER0231948 Pat9b_0804
MH M20 unassigned family M20 unassigned peptidases MER0231991 Pat9b_1994
MH M20 unassigned family M20 unassigned peptidases MER0232079 Pat9b_5565
MH M20 unassigned family M20 unassigned peptidases MER0232094 Pat9b_5900
MH M20 unassigned family M20 unassigned peptidases MER0231888 Pat9b_4477
MH M20 unassigned family M20 unassigned peptidases MER0231884 Pat9b_4349
MH M28 M28.005 IAP aminopeptidase MER0232027 Pat9b_3084
MH M28 non-peptidase homologue family M28 non-peptidase homologues MER0231898 Pat9b_4973
MH M28 non-peptidase homologue family M28 non-peptidase homologues MER0231885 Pat9b_4350
MJ M19 unassigned family M19 unassigned peptidases MER0228477 Pat9b_1786
MJ M19 unassigned family M19 unassigned peptidases MER0232057 Pat9b_3804
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0231922 Pat9b_0057
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0231957 Pat9b_1087
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0231963 hutI Pat9b_1240
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0231983 Pat9b_1888
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0231985 Pat9b_1914
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0231990 Pat9b_1960
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0232073 Pat9b_5500
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0232074 Pat9b_5501
MJ M38 unassigned family M38 unassigned peptidases MER0231886 Pat9b_4352
MJ M38 unassigned family M38 unassigned peptidases MER0231887 Pat9b_4416
MM M50 M50.004 RseP peptidase MER0231946 Pat9b_0757
MN M55 unassigned family M55 unassigned peptidases MER0232059 Pat9b_3812
MO M23 M23.011 YebA peptidase MER0232006 Pat9b_2305
MO M23 M23.950 YibP g.p. (Escherichia sp.) MER0232064 Pat9b_3889
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0232026 Pat9b_3072
MT M81 unassigned family M81 unassigned peptidases MER0223345 Pat9b_5327
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0232047 Pat9b_3579
MU M103 M103.UNW family M103 non-peptidase homologues MER0232045 Pat9b_3521
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0232007 Pat9b_2329
PA S1 S01.260 B1598 peptidase MER0209880
PA S1 S01.274 DegQ peptidase MER0231934 Pat9b_0446
PA S1 unassigned subfamily S1B unassigned peptidases MER0217872
PA S1 unassigned subfamily S1C unassigned peptidases MER0231944 Pat9b_0742
PA S1 unassigned subfamily S1C unassigned peptidases MER0211470 Pat9b_0445
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0232016 Pat9b_2756
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0231956 Pat9b_1084
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0232065 glmS Pat9b_3983
PB C44 unassigned family C44 unassigned peptidases MER0231935 Pat9b_0454
PB C44 unassigned family C44 unassigned peptidases MER0231949 Pat9b_0816
PB T1 T01.006 HslV component of HslUV peptidase MER0232063 hslV Pat9b_3865
PB T2 unassigned family T2 unassigned peptidases MER0231964 Pat9b_1268
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0231930 Pat9b_0272
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0231923 Pat9b_0089
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0231947 Pat9b_0797
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0232049 Pat9b_3673
PC C26 C26.957 GMP synthase MER0232021 guaA Pat9b_2918
PC C26 C26.960 TrpD protein (anthranilate synthase component II) MER0231997 Pat9b_2087
PC C26 C26.961 PuuD protein MER0232010 Pat9b_2555
PC C26 C26.964 CTP synthetase MER0447822 pyrG Pat9b_3093
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0232011 hisH Pat9b_2566
PC C26 unassigned family C26 unassigned peptidases MER0231943 carA Pat9b_0627
PC C26 unassigned family C26 unassigned peptidases MER0231973 Pat9b_1563
PC C26 unassigned family C26 unassigned peptidases MER0450628 Pat9b_5559
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0232024 purL Pat9b_2962
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0231952 Pat9b_0927
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0232067 Pat9b_5214
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0232087 Pat9b_5717
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0231882 Pat9b_4204
PC S51 unassigned family S51 unassigned peptidases MER0231928 Pat9b_0190
PE P1 unassigned family P01 unassigned peptidases MER0232060 Pat9b_3813
SC S9 S09.010 oligopeptidase B MER0232004 Pat9b_2290
SC S9 S09.A39 YeiG protein (Escherichi coli) MER0232013 Pat9b_2645
SC S9 S09.A40 YqiA protein (Escherichi coli) MER0215462
SC S9 S09.A46 YjfP protein (Escherichi coli) MER0232046 Pat9b_3546
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0231927 Pat9b_0178
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0232085 Pat9b_5702
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0209468
SC S9 unassigned subfamily S9A unassigned peptidases MER0231931 Pat9b_0286
SC S9 unassigned family S9 unassigned peptidases MER0231921 Pat9b_0038
SC S9 unassigned family S9 unassigned peptidases MER0231925 Pat9b_0131
SC S9 unassigned family S9 unassigned peptidases MER0231993 Pat9b_2002
SC S9 unassigned family S9 unassigned peptidases MER0232056 Pat9b_3775
SC S9 unassigned family S9 unassigned peptidases MER0232080 Pat9b_5589
SC S15 unassigned family S15 unassigned peptidases MER0232052 Pat9b_3730
SC S33 S33.971 epoxide hydrolase MER0232055 Pat9b_3770
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0232076 Pat9b_5534
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0232089 Pat9b_5738
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0213874
SC S33 unassigned family S33 unassigned peptidases MER0231926 Pat9b_0172
SC S33 unassigned family S33 unassigned peptidases MER0231958 Pat9b_1095
SC S33 unassigned family S33 unassigned peptidases MER0231974 Pat9b_1576
SC S33 unassigned family S33 unassigned peptidases MER0231980 Pat9b_1823
SC S33 unassigned family S33 unassigned peptidases MER0231986 Pat9b_1925
SC S33 unassigned family S33 unassigned peptidases MER0231987 Pat9b_1935
SC S33 unassigned family S33 unassigned peptidases MER0232041 Pat9b_3282
SC S33 unassigned family S33 unassigned peptidases MER0232050 bioH Pat9b_3709
SC S33 unassigned family S33 unassigned peptidases MER0232053 Pat9b_3743
SC S33 unassigned family S33 unassigned peptidases MER0232081 Pat9b_5598
SC S33 unassigned family S33 unassigned peptidases MER0231893 Pat9b_4682
SC S33 unassigned family S33 unassigned peptidases MER0231883 Pat9b_4326
SC S33 unassigned family S33 unassigned peptidases MER0212998
SC S33 unassigned family S33 unassigned peptidases MER0212581
SC S33 unassigned family S33 unassigned peptidases MER0209367
SE S11 S11.002 murein-DD-endopeptidase MER0231960 Pat9b_1190
SE S11 S11.003 penicillin-binding protein 6 MER0231965 Pat9b_1279
SE S11 S11.009 penicillin-binding protein 6b-type peptidase MER0232009 Pat9b_2550
SE S11 unassigned family S11 unassigned peptidases MER0231955 Pat9b_1063
SE S12 S12.006 class C beta-lactamase MER0231988 Pat9b_1950
SE S12 S12.012 AmpH protein (Escherichia-type) MER0232018 Pat9b_2857
SE S12 S12.950 esterase EstB MER0231889 Pat9b_4514
SE S12 unassigned family S12 unassigned peptidases MER0232058 Pat9b_3810
SE S13 S13.001 D-Ala-D-Ala peptidase C MER0231936 Pat9b_0498
SE S13 unassigned family S13 unassigned peptidases MER1313704
SF S24 S24.001 repressor LexA MER0229707 lexA Pat9b_0291
SF S24 S24.002 phage lambda repressor protein MER0231998 Pat9b_2148
SF S24 S24.003 UmuD protein MER0231975 Pat9b_1594
SF S24 S24.003 UmuD protein MER0231881 Pat9b_4044
SF S24 unassigned family S24 unassigned peptidases MER0232070 Pat9b_5364
SF S26 S26.001 signal peptidase I MER0232025 Pat9b_2974
SH S73 S73.001 gpO peptidase (Enterobacteria phage P2) MER0232044 Pat9b_3433
SH S78 S78.001 prohead peptidase (bacteriophage HK97) MER0232071 Pat9b_5391
SJ S16 S16.001 Lon-A peptidase MER0231954 lon Pat9b_0945
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0231941 Pat9b_0584
SJ S16 S16.A10 ycbZ (Escherichia coli) MER0231968 Pat9b_1368
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0232061 Pat9b_3841
SK S14 S14.001 peptidase Clp (type 1) MER0231953 clpP Pat9b_0943
SK S41 S41.001 C-terminal processing peptidase-1 MER0232002 Pat9b_2248
SK S41 S41.001 C-terminal processing peptidase-1 MER0232003 Pat9b_2248
SK S49 unassigned subfamily S49B unassigned peptidases MER0297689 Pat9b_2195
SS S66 S66.002 murein tetrapeptidase LD-carboxypeptidase (Escherichia-type) MER0231972 Pat9b_1540
ST S54 S54.016 GlpG peptidase (Escherichia-type) MER0232051 Pat9b_3715
U- U32 U32.002 collagenase (Helicobacter-type) MER0232012 Pat9b_2612
U- U32 U32.A01 YhbV protein (Escherichia coli) MER0231938 Pat9b_0518
U- U32 unassigned family U32 unassigned peptidases MER0231939 Pat9b_0519
U- U69 unassigned family U69 unassigned peptidases MER0229664
U- U69 unassigned family U69 unassigned peptidases MER0229666
U- U69 unassigned family U69 unassigned peptidases MER0231890

GENOME ANALYSIS: Comparison with 17 completely sequenced genomes from genus Pantoea
Family Comment
A31 significant presence (1 homologues)
A39 significant decrease in homologues (1 homologues)
C26 lineage specific expansion (9 homologues)
M38 lineage specific expansion (10 homologues)
M81 significant presence (1 homologues)
S15 significant presence (1 homologues)
S33 lineage specific expansion (19 homologues)
S49 significant decrease in homologues (1 homologues)
S78 significant presence (1 homologues)
U69 significant presence (3 homologues)