Shewanella violacea

Taxonomy
Taxonomy database identifier: 60217
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Alteromonadales
Family Alteromonadaceae
Genus Shewanella
Species violacea
Peptidase View peptidase sequences from Shewanella violacea
Count of known and putative peptidases: 144, non-peptidase homologues 51
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 A08.001 signal peptidase II MER0203102 lspA SVI_1003
AC A8 A08.001 signal peptidase II MER1152489
AD A24 A24.001 type 4 prepilin peptidase 1 MER0203073 pilD SVI_0255
AD A24 A24.019 ComC peptidase MER0203147 SVI_2000
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0716719 SVI_3379
CA C83 C83.001 gamma-glutamylcysteine dipeptidyltranspeptidase MER0203146 SVI_1964
CA C93 unassigned family C93 unassigned peptidases MER0394544 SVI_3851
CF C15 non-peptidase homologue family C15 non-peptidase homologues MER0697830 SVI_3683
CL C60 unassigned subfamily C60A unassigned peptidases MER0203129 SVI_1841
CL C60 unassigned subfamily C60A unassigned peptidases MER0203157 SVI_2152
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0244136 SVI_1760
CL C82 C82.A03 YnhG protein (Escherichia coli) MER0463165 SVI_0888
CO C40 C40.004 spr peptidase MER0203268 SVI_4301
CO C40 unassigned family C40 unassigned peptidases MER0203116 SVI_1254
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0203132 pepN-2 SVI_1851
MA M1 M01.031 cold-active aminopeptidase (Colwellia psychrerythraea)-type peptidase MER0203112 SVI_1162
MA M1 non-peptidase homologue family M1 non-peptidase homologues MER0203089 pepN-1 SVI_0754
MA M1 non-peptidase homologue family M1 non-peptidase homologues MER0203090 pepN-1 SVI_0754
MA M1 unassigned family M1 unassigned peptidases MER0203156 SVI_2133
MA M1 unassigned family M1 unassigned peptidases MER0203272 SVI_4322
MA M2 unassigned family M2 unassigned peptidases MER0203161 SVI_2322
MA M3 M03.004 oligopeptidase A MER0203065 prlC SVI_0139
MA M3 unassigned subfamily M3A unassigned peptidases MER0203169 dcp SVI_2622
MA M4 M04.016 PA peptidase (Aeromonas-type) MER0203253 SVI_3873
MA M4 M04.018 stearolysin MER0203088 SVI_0640
MA M4 unassigned family M4 unassigned peptidases MER0203154 SVI_2120
MA M6 unassigned family M6 unassigned peptidases MER0203196 SVI_3105
MA M6 unassigned family M6 unassigned peptidases MER0203265 SVI_4260
MA M9 unassigned subfamily M9A unassigned peptidases MER0203060 SVI_0067
MA M9 unassigned subfamily M9A unassigned peptidases MER0203104 SVI_1082
MA M9 unassigned subfamily M9A unassigned peptidases MER0203111 SVI_1161
MA M9 unassigned subfamily M9A unassigned peptidases MER0203218 SVI_3541
MA M9 unassigned subfamily M9A unassigned peptidases MER0203225 SVI_3717
MA M9 unassigned subfamily M9A unassigned peptidases MER0203271 SVI_4320
MA M9 unassigned subfamily M9A unassigned peptidases MER1202242
MA M9 unassigned subfamily M9A unassigned peptidases MER1202429
MA M12 unassigned subfamily M12A unassigned peptidases MER0203123 SVI_1756
MA M13 unassigned family M13 unassigned peptidases MER0203074 SVI_0269
MA M13 unassigned family M13 unassigned peptidases MER0203213 SVI_3432
MA M32 unassigned family M32 unassigned peptidases MER0203092 SVI_0844
MA M41 M41.001 FtsH peptidase MER0203206 ftsH SVI_3296
MA M43 M43.001 cytophagalysin MER0203105 SVI_1094
MA M43 M43.008 Mername-AA293 peptidase MER0203162 SVI_2434
MA M43 unassigned subfamily M43A unassigned peptidases MER0203137 SVI_1922
MA M48 M48.002 HtpX peptidase MER0203175 htpX SVI_2704
MA M48 M48.023 BepA (Escherichia coli) MER0203135 SVI_1893
MA M48 unassigned subfamily M48C unassigned peptidases MER0203208 SVI_3309
MA M48 unassigned subfamily M48C unassigned peptidases MER0203217 SVI_3496
MA M56 unassigned family M56 unassigned peptidases MER0203215 SVI_3474
MA M61 unassigned family M61 unassigned peptidases MER0203110 SVI_1146
MA M90 unassigned family M90 unassigned peptidases MER0286891 SVI_1364
MC M14 non-peptidase homologue subfamily M14A non-peptidase homologues MER0203184 SVI_2872
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0203067 SVI_0170
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0203263
MC M14 unassigned subfamily M14D unassigned peptidases MER0203150 SVI_2056
MC M14 unassigned family M14 unassigned peptidases MER0203216
MD M15 non-peptidase homologue family M15 non-peptidase homologues MER0203134 SVI_1879
MD M15 unassigned subfamily M15B unassigned peptidases MER0203139 SVI_1932
MD M74 unassigned family M74 unassigned peptidases MER0203228 SVI_3765
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0203071 SVI_0237
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0203072 SVI_0237
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0203086 SVI_0567
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0203199 SVI_3153
ME M16 unassigned subfamily M16A unassigned peptidases MER0203187 SVI_2900
ME M16 unassigned subfamily M16B unassigned peptidases MER0203198 SVI_3153
ME M16 unassigned subfamily M16B unassigned peptidases MER0203070 SVI_0236
MF M17 M17.003 PepA aminopeptidase MER0203091 pepA-1 SVI_0838
MF M17 M17.004 PepB aminopeptidase MER0203222 pepB SVI_3618
MF M17 unassigned family M17 unassigned peptidases MER0203195 pepA-2 SVI_3086
MF M17 unassigned family M17 unassigned peptidases MER0203209 SVI_3324
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0203115 map-1 SVI_1231
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0203192 map-2 SVI_3022
MG M24 M24.003 Xaa-Pro dipeptidase (bacteria-type) MER0203059 pepQ SVI_0053
MG M24 M24.009 aminopeptidase P1 MER0203093 SVI_0851
MG M24 unassigned subfamily M24B unassigned peptidases MER0203094 SVI_0854
MG M24 unassigned subfamily M24B unassigned peptidases MER0203120 pepP SVI_1723
MG M24 unassigned subfamily M24B unassigned peptidases MER1244138
MH M20 M20.007 Xaa-His dipeptidase MER0203210 pepD SVI_3325
MH M20 unassigned subfamily M20A unassigned peptidases MER0203140 dapE SVI_1933
MH M20 unassigned subfamily M20A unassigned peptidases MER0203260 argE SVI_4019
MH M20 unassigned subfamily M20C unassigned peptidases MER0603031
MH M20 unassigned family M20D unassigned peptidases MER0203113 SVI_1180
MH M28 unassigned subfamily M28D unassigned peptidases MER0203101 SVI_0997
MH M28 unassigned family M28 unassigned peptidases MER0203125 SVI_1776
MH M28 unassigned family M28 unassigned peptidases MER0203227 SVI_3729
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0203103 nagA SVI_1024
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0871710 SVI_3142
MJ M38 unassigned family M38 unassigned peptidases MER0203266 hutI SVI_4277
MM M50 M50.004 RseP peptidase MER0891332 SVI_1239
MM M50 non-peptidase homologue subfamily M50B non-peptidase homologues MER0897927 SVI_1240
MM M50 unassigned subfamily M50B unassigned peptidases MER0203224 SVI_3696
MO M23 M23.011 YebA peptidase MER0203189 SVI_2943
MO M23 M23.014 ShyA D,D-endopeptidase (Vibrio cholerae) MER0203099 SVI_0905
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0203122 SVI_1754
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0203200 nlpD SVI_3168
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0203269 SVI_4307
MO M23 unassigned subfamily M23B unassigned peptidases MER0015411 SVI_4025
MP M67 unassigned family M67 unassigned peptidases MER0905742 SVI_1924
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0203076 tldD SVI_0310
MU M103 M103.950 microcin-processing peptidase 1 homologue MER0203077 pmbA SVI_0317
NB N6 N06.003 EscU protein (Escherichia coli) MER0203159 SVI_2227
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0203119 flhB SVI_1445
PA S1 S01.275 DegS peptidase MER0203078 degS SVI_0429
PA S1 unassigned subfamily S1C unassigned peptidases MER0203079 SVI_0430 SVI_0430
PA S46 S46.003 dipeptidyl-peptidase BII (Pseudoxanthomonas mexicana) MER0203080 SVI_0448
PA S46 S46.003 dipeptidyl-peptidase BII (Pseudoxanthomonas mexicana) MER0203223 SVI_3655
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0203185 purF SVI_2873
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0203124 asnB SVI_1775
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0203273 glmS SVI_4329
PB C59 C59.001 penicillin V acylase precursor MER0203229 SVI_3766
PB C59 unassigned family C59 unassigned peptidases MER0203259 SVI_3983
PB S45 S45.003 cephalosporin C acylase precursor MER0203114 SVI_1186
PB S45 S45.004 acyl-homoserine lactone acylase MER0203066 SVI_0150
PB T1 T01.006 HslV component of HslUV peptidase MER0203075 hslV SVI_0274
PB T2 unassigned family T2 unassigned peptidases MER0203163 SVI_2456
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0203168 ggt SVI_2621
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0203081 pabA SVI_0494
PC C26 C26.960 TrpD protein (anthranilate synthase component II) MER0203181 trpG SVI_2804
PC C26 C26.964 CTP synthetase MER0449216 pyrG SVI_3176
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0444423 hisH SVI_2492
PC C26 C26.A05 gamma-glutamyl peptidase 1 (Arabidopsis thaliana) MER0203166 SVI_2477
PC C26 C26.A07 At1g63660 (Arabidopsis thaliana) MER0203117 guaA SVI_1384
PC C26 unassigned family C26 unassigned peptidases MER0203201 SVI_3188
PC C26 unassigned family C26 unassigned peptidases MER0203207 carA SVI_3306
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0203118 purL SVI_1387
PC C56 C56.975 ES1 protein homolog, mitochondrial MER0203063 elbB SVI_0089
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0203256 SVI_3946
PC S51 non-peptidase homologue family S51 non-peptidase homologues MER0203128 SVI_1835
SB S8 unassigned subfamily S8A unassigned peptidases MER0203155 SVI_2131
SB S8 unassigned subfamily S8A unassigned peptidases MER0203188 aprE SVI_2920
SB S8 unassigned subfamily S8A unassigned peptidases MER0203220 SVI_3593
SB S8 unassigned subfamily S8A unassigned peptidases MER0203226 SVI_3719
SC S9 S09.010 oligopeptidase B MER0203264 ptrB SVI_4215
SC S9 S09.012 dipeptidyl-peptidase 5 MER0203148 SVI_2018
SC S9 S09.071 trilobed protease MER0203182 SVI_2809
SC S9 S09.940 S-formylglutathione hydrolase FrmB (Escherichi coli) MER0203211 SVI_3327
SC S9 S09.A77 dpf-6 g.p. (Caenorhabditis elegans) MER0203170 SVI_2634
SC S9 S09.A77 dpf-6 g.p. (Caenorhabditis elegans) MER0203254 SVI_3898
SC S9 S09.A77 dpf-6 g.p. (Caenorhabditis elegans) MER0203261 SVI_4063
SC S9 unassigned subfamily S9A unassigned peptidases MER0203126 SVI_1785
SC S9 unassigned subfamily S9A unassigned peptidases MER0203221 SVI_3599 SVI_3599
SC S9 unassigned subfamily S9A unassigned peptidases MER1284047
SC S9 unassigned subfamily S9B unassigned peptidases MER0203082 SVI_0495 SVI_0495
SC S9 unassigned subfamily S9B unassigned peptidases MER1299052
SC S9 unassigned subfamily S9C unassigned peptidases MER0203194 SVI_3073
SC S9 unassigned subfamily S9C unassigned peptidases MER1302358
SC S9 unassigned subfamily S9C unassigned peptidases MER1302258
SC S9 unassigned family S9 unassigned peptidases MER0203108 SVI_1129
SC S9 unassigned family S9 unassigned peptidases MER0203109 SVI_1133
SC S9 unassigned family S9 unassigned peptidases MER0203258 SVI_3971
SC S15 unassigned family S15 unassigned peptidases MER1021190 SVI_2634
SC S33 S33.001 prolyl aminopeptidase MER0203262 SVI_4112
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0203121 SVI_1747
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0203149 SVI_2036
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0203193 dhaA SVI_3044
SC S33 unassigned family S33 unassigned peptidases MER0203062 pldB SVI_0080
SC S33 unassigned family S33 unassigned peptidases MER0203069 SVI_0219
SC S33 unassigned family S33 unassigned peptidases MER0203138 SVI_1931
SC S33 unassigned family S33 unassigned peptidases MER0203164 SVI_2472
SC S33 unassigned family S33 unassigned peptidases MER0203183 pip SVI_2829
SC S33 unassigned family S33 unassigned peptidases MER0203219 SVI_3550
SC S33 unassigned family S33 unassigned peptidases MER0203267 SVI_4293
SE S11 unassigned family S11 unassigned peptidases MER0203212 dacA SVI_3410
SE S12 unassigned family S12 unassigned peptidases MER0203127 SVI_1834
SE S12 unassigned family S12 unassigned peptidases MER0203214 SVI_3445
SE S12 unassigned family S12 unassigned peptidases MER0355698 SVI_3445
SE S13 S13.001 D-Ala-D-Ala peptidase C MER0203153 dacB SVI_2082
SF S24 S24.001 repressor LexA MER0203068 lexA SVI_0193
SF S24 S24.003 UmuD protein MER0203160 umuD SVI_2264
SF S26 S26.001 signal peptidase I MER0203100 lepB-1 SVI_0937
SF S26 S26.026 PA1303 peptidase (Pseudomonas sp.) MER0203255 lepB-2 SVI_3916
SJ S16 S16.001 Lon-A peptidase MER0203190 lon SVI_2995
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0203205 radA SVI_3268
SJ S16 S16.A10 ycbZ (Escherichia coli) MER0203133 SVI_1866
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0203257 SVI_3949
SJ S16 unassigned family S16 unassigned peptidases MER0203158 SVI_2223
SK S14 S14.001 peptidase Clp (type 1) MER0203191 clpP SVI_2997
SK S41 S41.001 C-terminal processing peptidase-1 MER0203130 SVI_1850
SK S41 S41.001 C-terminal processing peptidase-1 MER0203131 SVI_1850
SK S41 S41.004 C-terminal processing peptidase-3 MER0203270 SVI_4308
SK S41 S41.012 Pep putative peptidase (Vibrio-type) MER0203107 SVI_1115
SK S41 non-peptidase homologue subfamily S41B non-peptidase homologues MER0168571 SVI_3144
SK S41 non-peptidase homologue subfamily S41B non-peptidase homologues MER0168572 SVI_3144
SK S41 non-peptidase homologue family S41 non-peptidase homologues MER0168569 SVI_3144
SK S41 non-peptidase homologue family S41 non-peptidase homologues MER0168570 SVI_3144
SK S41 unassigned subfamily S41A unassigned peptidases MER1345239
SK S49 unassigned subfamily S49B unassigned peptidases MER0203167 SVI_2586
SK S49 unassigned subfamily S49B unassigned peptidases MER0203179 SVI_2793
SK S49 unassigned subfamily S49B unassigned peptidases MER0203151 sppA SVI_2060
ST S54 S54.016 GlpG peptidase (Escherichia-type) MER0203064 glpG SVI_0090
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0203087 SVI_0573
ST S54 unassigned family S54 unassigned peptidases MER1080080 SVI_2332
U- U32 U32.002 collagenase (Helicobacter-type) MER0203202 SVI_3231
U- U32 U32.A01 YhbV protein (Escherichia coli) MER0203204 SVI_3240
U- U32 unassigned family U32 unassigned peptidases MER0203186 SVI_2888
U- U32 unassigned family U32 unassigned peptidases MER0203197 SVI_3121
U- U32 unassigned family U32 unassigned peptidases MER0203203 SVI_3239

GENOME ANALYSIS: Comparison with 24 completely sequenced genomes from genus Shewanella
Family Comment
C83 significant presence (1 homologues)
M1 lineage specific expansion (6 homologues)