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MEROPS SUBMISSIONS

Other
information

Pseudovibrio sp. JE062

Taxonomy
Taxonomy database identifier: 439495
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Rhodobacterales
Family Rhodobacteraceae
Genus Pseudovibrio
Species sp. JE062
Peptidase View peptidase sequences from Pseudovibrio sp. JE062
Count of known and putative peptidases: 73, non-peptidase homologues 24
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 unassigned family A32 unassigned peptidases MER0241811 PJE062_4273
AA A32 unassigned family A32 unassigned peptidases MER0241890 PJE062_4453
AC A8 unassigned family A8 unassigned peptidases MER0401061 lspA PJE062_5212
AD A24 unassigned subfamily A24B unassigned peptidases MER0427129
CA C93 unassigned family C93 unassigned peptidases MER0391253 PJE062_5150
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0181480 pcp PJE062_2577
CL C82 C82.003 ykuD transpeptidase MER0463629
CL C82 C82.003 ykuD transpeptidase MER0462204
CL C82 C82.003 ykuD transpeptidase MER0462205
CL C82 C82.003 ykuD transpeptidase MER0462206
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0243855
CL C82 unassigned subfamily C82A unassigned peptidases MER0462203
CL C82 unassigned subfamily C82A unassigned peptidases MER0243925
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0163829 PJE062_4391
CO C40 unassigned family C40 unassigned peptidases MER0168138 PJE062_117
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0168180 pepN PJE062_382
MA M2 unassigned family M2 unassigned peptidases MER0167919 PJE062_3277
MA M3 unassigned family M3 unassigned peptidases MER0181448 PJE062_2089
MA M10 unassigned subfamily M10B unassigned peptidases MER0168214 PJE062_542
MA M10 unassigned subfamily M10B unassigned peptidases MER0232866 PJE062_4814
MA M10 unassigned subfamily M10B unassigned peptidases MER1209053
MA M10 unassigned subfamily M10B unassigned peptidases MER0467422
MA M10 unassigned subfamily M10B unassigned peptidases MER0188095 PJE062_2767
MA M10 unassigned subfamily M10B unassigned peptidases MER0188096 PJE062_2969
MA M41 M41.001 FtsH peptidase MER0164102 ftsH PJE062_2053
MA M48 unassigned subfamily M48B unassigned peptidases MER0167925 htpX PJE062_3278
MA M48 unassigned family M48 unassigned peptidases MER0889059 PJE062_1783
MD M15 non-peptidase homologue family M15 non-peptidase homologues MER0164041 PJE062_2040
MD M74 unassigned family M74 unassigned peptidases MER0163556 mepA PJE062_2365
ME M16 M16.019 YMXG peptidase MER0181416 PJE062_5323
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0928415 PJE062_5268
ME M16 unassigned subfamily M16B unassigned peptidases MER0175699 PJE062_3017
ME M16 unassigned subfamily M16B unassigned peptidases MER0315608 PJE062_241
ME M16 unassigned family M16 unassigned peptidases MER0163919 PJE062_1984
MF M17 M17.003 PepA aminopeptidase MER0163867 pepA PJE062_4294
MF M17 unassigned family M17 unassigned peptidases MER0181389 pepA PJE062_4511
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0167871 map_2 PJE062_3845
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0168459 map_1 PJE062_4868
MG M24 M24.009 aminopeptidase P1 MER0168628 PJE062_5063
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0483717
MG M24 unassigned subfamily M24B unassigned peptidases MER0482055 pepP
MH M20 non-peptidase homologue subfamily M20A non-peptidase homologues MER0800440 argE
MH M20 non-peptidase homologue subfamily M20F non-peptidase homologues MER0849054 dapE_1
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0842834 PJE062_1383
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0175706 PJE062_1294
MH M20 unassigned subfamily M20A unassigned peptidases MER0370342 PJE062_361
MH M20 unassigned subfamily M20A unassigned peptidases MER0475035 dapE_2
MH M20 unassigned subfamily M20B unassigned peptidases MER0168575 pepT PJE062_5046
MH M20 unassigned family M20D unassigned peptidases MER0163987 PJE062_1994
MH M20 unassigned family M20D unassigned peptidases MER0168899 PJE062_223
MH M20 unassigned family M20 unassigned peptidases MER0168790 PJE062_1153
MH M42 unassigned family M42 unassigned peptidases MER0364388 cel PJE062_2225
MJ M19 unassigned family M19 unassigned peptidases MER0181393 PJE062_4512
MJ M19 unassigned family M19 unassigned peptidases MER0168034 PJE062_57
MJ M38 M38.982 urease MER0859475 ureC
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0862325 hutI
MM M50 unassigned subfamily M50B unassigned peptidases MER0898429 rseP
MO M23 M23.951 DipM g.p. (Caulobacter sp.) MER0388455 PJE062_1678
MO M23 unassigned subfamily M23B unassigned peptidases MER0167913 PJE062_3184
MO M23 unassigned subfamily M23B unassigned peptidases MER0168986 PJE062_1772
MS M75 M75.001 imelysin MER0191370 PJE062_2551
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0168202 PJE062_464
MU M103 M103.950 microcin-processing peptidase 1 homologue MER0245457 pmbA PJE062_182
NB N6 N06.001 YscU protein MER0326818
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405694 flhB_2
NB N6 non-peptidase homologue family N6 non-lyase homologues MER0276589 flhB_1 PJE062_4777
PA S1 unassigned subfamily S1C unassigned peptidases MER0206085 PJE062_401 PJE062_401
PA S1 unassigned subfamily S1C unassigned peptidases MER0327686 htrA PJE062_4726
PA S1 unassigned subfamily S1C unassigned peptidases MER0206070 PJE062_4839
PA S1 unassigned family S1 unassigned peptidases MER0214022
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0305771 purF PJE062_4314
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0459284
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0168840 glmS_1 PJE062_1349
PB C59 C59.001 penicillin V acylase precursor MER0330027 cbaH PJE062_2018
PB T1 T01.006 HslV component of HslUV peptidase MER0233134 hslV PJE062_2770
PB T2 unassigned family T2 unassigned peptidases MER0167892 aspG PJE062_3908
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0233248 ggt_1 PJE062_2628
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0379182 ggt_2 PJE062_3292
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0439537
PC C26 C26.964 CTP synthetase MER0451263 pyrG
PC C26 C26.A07 At1g63660 (Arabidopsis thaliana) MER0442187 guaA_1
PC C26 unassigned family C26 unassigned peptidases MER0441552 carA
PC C26 unassigned family C26 unassigned peptidases MER0446272 hisH
PC C26 unassigned family C26 unassigned peptidases MER0448093
PC C26 unassigned family C26 unassigned peptidases MER0449522
PC C26 unassigned family C26 unassigned peptidases MER0446446
PC C26 unassigned family C26 unassigned peptidases MER0450781 guaA_2
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0167905 PJE062_3948
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0310836 PJE062_5075
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0163658 darR PJE062_3588
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0163745 PJE062_4019
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0181385 PJE062_4455
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0168265 PJE062_621
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0168324 PJE062_2626
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0168681 PJE062_1023
PE P1 unassigned family P01 unassigned peptidases MER0163795 PJE062_4092
PE T5 T05.001 ornithine acetyltransferase precursor MER0167980 argJ PJE062_3437
SB S8 unassigned subfamily S8A unassigned peptidases MER0986869 PJE062_4115
SC S9 S09.010 oligopeptidase B MER0168165 ptrB PJE062_293
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0214828
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0213791
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0209664
SC S9 unassigned subfamily S9B unassigned peptidases MER1001087 fghA
SC S9 unassigned subfamily S9C unassigned peptidases MER0168516 PJE062_5031 PJE062_5031
SC S9 unassigned family S9 unassigned peptidases MER0478466 PJE062_1623
SC S9 unassigned family S9 unassigned peptidases MER0478425
SC S9 unassigned family S9 unassigned peptidases MER0477786
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1022695 PJE062_3683
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0214114
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0211585
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0209972 PJE062_3959
SC S33 unassigned family S33 unassigned peptidases MER0163704 PJE062_2465
SC S33 unassigned family S33 unassigned peptidases MER0209821
SC S33 unassigned family S33 unassigned peptidases MER0209471
SC S33 unassigned family S33 unassigned peptidases MER0214577
SE S11 non-peptidase homologue family S11 non-peptidase homologues MER0979290 PJE062_1210
SE S11 non-peptidase homologue family S11 non-peptidase homologues MER0168739 PJE062_1066
SE S11 unassigned family S11 unassigned peptidases MER0163604 PJE062_3548
SE S11 unassigned family S11 unassigned peptidases MER0167934 PJE062_3414
SE S11 unassigned family S11 unassigned peptidases MER0168189 dacF PJE062_410
SE S12 unassigned family S12 unassigned peptidases MER1009207 PJE062_1752
SE S12 unassigned family S12 unassigned peptidases MER1004471 PJE062_713
SE S12 unassigned family S12 unassigned peptidases MER1006013 PJE062_4151
SE S12 unassigned family S12 unassigned peptidases MER1003685 PJE062_4009
SF S26 S26.001 signal peptidase I MER0266323 lepB PJE062_1430
SH S78 S78.001 prohead peptidase (bacteriophage HK97) MER0168156 PJE062_207
SJ S16 S16.001 Lon-A peptidase MER0169024 lon PJE062_1826
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1034217 radA
SK S14 S14.001 peptidase Clp (type 1) MER0175712 clpP_1 PJE062_1602
SK S14 unassigned family S14 unassigned peptidases MER0168405 clpP_3 PJE062_4794
SK S41 S41.004 C-terminal processing peptidase-3 MER0181486 PJE062_2578
SK S49 unassigned subfamily S49B unassigned peptidases MER0168090 sohB PJE062_92
SK S49 unassigned subfamily S49B unassigned peptidases MER0181493 sppA PJE062_2688
ST S54 unassigned family S54 unassigned peptidases MER1079060 PJE062_4691
U- U32 unassigned family U32 unassigned peptidases MER0403820

GENOME ANALYSIS: Comparison with 100 completely sequenced genomes from family Rhodobacteraceae
Family Comment
C15 significant presence (1 homologues)
C59 significant presence (1 homologues)
C93 significant presence (1 homologues)
M2 significant presence (1 homologues)
M3 significant decrease in homologues (1 homologues)
T2 significant presence (1 homologues)
U32 significant presence (1 homologues)

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