Methylocella silvestris

Taxonomy
Taxonomy database identifier: 199596
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Rhizobiales
Species silvestris
Family Beijerinckiaceae
Genus Methylocella
Peptidase View peptidase sequences from Methylocella silvestris
Count of known and putative peptidases: 104, non-peptidase homologues 62
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0135605 lspA Msil_2861
AD A24 unassigned subfamily A24A unassigned peptidases MER0123779 Msil_0908
AD A24 unassigned subfamily A24B unassigned peptidases MER0135662 Msil_2689
AE A31 A31.004 hoxW peptidase MER0135625 Msil_2747
AE A31 A31.005 hupW peptidase MER0124754 Msil_3760
CA C93 unassigned family C93 unassigned peptidases MER0391617 Msil_0957
CD C14 non-peptidase homologue subfamily C14B non-peptidase homologues MER0136363 Msil_1894
CD C14 non-peptidase homologue family C14 non-peptidase homologues MER0137781 Msil_1332
CD C14 unassigned subfamily C14B unassigned peptidases MER0135930 Msil_2371
CD C14 unassigned subfamily C14B unassigned peptidases MER0135874 Msil_2382
CD C14 unassigned subfamily C14B unassigned peptidases MER0135580 Msil_2884
CF C15 unassigned family C15 unassigned peptidases MER0138942 Msil_1074
CL C82 C82.003 ykuD transpeptidase MER0138944 Msil_1053
CL C82 C82.003 ykuD transpeptidase MER0138131 Msil_1225
CL C82 C82.003 ykuD transpeptidase MER0135934 Msil_2290
CL C82 C82.003 ykuD transpeptidase MER0135374 Msil_3032
CL C82 C82.003 ykuD transpeptidase MER0123259 Msil_3872
CL C82 C82.003 ykuD transpeptidase MER0121226 Msil_3879
CL C82 non-peptidase homologue subfamily C82A non-peptidase homologues MER0135770 Msil_2492
CL C82 unassigned subfamily C82A unassigned peptidases MER0136924 Msil_1788
CL C82 unassigned subfamily C82A unassigned peptidases MER0243941 Msil_0166
CL C82 unassigned subfamily C82A unassigned peptidases MER0243920 Msil_3169
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0138695 Msil_1127
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0341781 Msil_2380
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0140575 Msil_0194
MA M3 unassigned subfamily M3A unassigned peptidases MER0125221 Msil_3687
MA M3 unassigned subfamily M3B unassigned peptidases MER0140628 Msil_2576
MA M41 M41.001 FtsH peptidase MER0138993 ftsH Msil_0780
MA M48 unassigned subfamily M48A unassigned peptidases MER0138299 Msil_2347
MA M48 unassigned subfamily M48C unassigned peptidases MER0137503 Msil_1362
MD M15 non-peptidase homologue family M15 non-peptidase homologues MER0135953 Msil_2156
MD M15 unassigned subfamily M15D unassigned peptidases MER0135970 Msil_2119
MD M74 unassigned family M74 unassigned peptidases MER0134850 Msil_3296
MD M74 unassigned family M74 unassigned peptidases MER1263056
ME M16 M16.019 YMXG peptidase MER0140248 Msil_2863
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0135589 Msil_2864
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0135597 Msil_2864
ME M16 unassigned subfamily M16B unassigned peptidases MER0140831 Msil_1252
MF M17 unassigned family M17 unassigned peptidases MER0138708 Msil_1126
MF M17 unassigned family M17 unassigned peptidases MER0135936 Msil_2221
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0135981 Msil_2076
MG M24 M24.009 aminopeptidase P1 MER0137383 Msil_1427
MH M20 unassigned subfamily M20A unassigned peptidases MER0139035 dapE Msil_1021
MH M20 unassigned subfamily M20F unassigned peptidases MER0140380 Msil_0367
MH M20 unassigned family M20 unassigned peptidases MER0139045 Msil_1014
MJ M38 M38.982 urease MER0136084 ureC Msil_2011
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0138709 Msil_1099
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0124144 Msil_3849
MM M50 unassigned subfamily M50B unassigned peptidases MER0124232 Msil_3836
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0137668 Msil_1341
MO M23 non-peptidase homologue family M23 non-peptidase homologues MER0140013 Msil_0644
MO M23 unassigned subfamily M23B unassigned peptidases MER0139380 Msil_3284
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405856 flhB Msil_0022
PA S1 non-peptidase homologue subfamily S1B non-peptidase homologues MER0137797 Msil_1261
PA S1 unassigned subfamily S1A unassigned peptidases MER0140209 Msil_0432
PA S1 unassigned subfamily S1C unassigned peptidases MER0140587 Msil_0188 Msil_0188
PA S1 unassigned subfamily S1C unassigned peptidases MER0140098 Msil_0606
PA S1 unassigned subfamily S1C unassigned peptidases MER0139235 Msil_0953
PA S1 unassigned subfamily S1C unassigned peptidases MER0135478 Msil_2993
PA S1 unassigned subfamily S1C unassigned peptidases MER1274722
PA S1 unassigned family S1 unassigned peptidases MER0138778 Msil_1093
PA S1 unassigned family S1 unassigned peptidases MER0137591 Msil_1350
PA S1 unassigned family S1 unassigned peptidases MER0125155 Msil_3704
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0141036 Msil_0413
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0122974 Msil_3875
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0139709 Msil_0708
PB C44 unassigned family C44 unassigned peptidases MER0135679 Msil_2632
PB C59 C59.001 penicillin V acylase precursor MER0141988 Msil_3557
PB T1 T01.006 HslV component of HslUV peptidase MER0137342 hslV Msil_2558
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0136583 Msil_0016
PC C26 C26.001 gamma-glutamyl hydrolase MER0136841 Msil_1805
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0140171 Msil_0505
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0135861 Msil_2397
PC C26 C26.964 CTP synthetase MER0140114 pyrG Msil_0510
PC C26 C26.A07 At1g63660 (Arabidopsis thaliana) MER0140311 guaA Msil_0378
PC C26 unassigned family C26 unassigned peptidases MER0137013 Msil_1622
PC C26 unassigned family C26 unassigned peptidases MER0136503 Msil_1842
PC C26 unassigned family C26 unassigned peptidases MER0135725 Msil_2552
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0140590 Msil_0128
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0139225 Msil_0966
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0138694 Msil_1181
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0136149 Msil_1918
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0127005 Msil_3465
PE P1 P01.101 pantetheinyl hydrolase ThnT precursor MER0138856 Msil_1091
PE T5 T05.001 ornithine acetyltransferase precursor MER0123043 argJ Msil_2520
SB S53 S53.004 kumamolisin MER0133856 Msil_3445
SB S53 S53.008 physarolisin II MER0124520 Msil_3227
SB S53 unassigned family S53 unassigned peptidases MER1360039
SB S53 unassigned family S53 unassigned peptidases MER1358513
SC S9 S09.010 oligopeptidase B MER0123307 Msil_1674
SC S9 S09.074 tyrosyl aminopeptidase (Raphanus-type) MER0137209 Msil_1579
SC S9 S09.A77 dpf-6 g.p. (Caenorhabditis elegans) MER0123780 Msil_1886
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0140486 Msil_0233
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0139928 Msil_0649
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0139415 Msil_0943
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0138333 Msil_1211
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0136011 Msil_2066
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0134947 Msil_3130
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0134845 Msil_3360
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0126872
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0125930 Msil_3566
SC S9 unassigned subfamily S9C unassigned peptidases MER0211564 Msil_2542
SC S9 unassigned family S9 unassigned peptidases MER0140495 Msil_0227
SC S9 unassigned family S9 unassigned peptidases MER0140023 Msil_0639
SC S9 unassigned family S9 unassigned peptidases MER0139712 Msil_0684
SC S9 unassigned family S9 unassigned peptidases MER0138514 Msil_1189
SC S9 unassigned family S9 unassigned peptidases MER0137796 Msil_1297
SC S9 unassigned family S9 unassigned peptidases MER0137197 Msil_1610
SC S9 unassigned family S9 unassigned peptidases MER0136358 Msil_1900
SC S9 unassigned family S9 unassigned peptidases MER0136072 Msil_2026
SC S9 unassigned family S9 unassigned peptidases MER0135892 Msil_2379
SC S9 unassigned family S9 unassigned peptidases MER0134306 Msil_3376
SC S9 unassigned family S9 unassigned peptidases MER0125798 Msil_3599
SC S9 unassigned family S9 unassigned peptidases MER0125140 Msil_3723
SC S10 unassigned family S10 unassigned peptidases MER0137764 Msil_1336
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1019962 Msil_1610
SC S33 S33.010 SCO7095-type peptidase MER0135663 Msil_2679
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0139578 Msil_0851
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0138950 Msil_1042
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0136829 Msil_1822
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0135961 Msil_2149
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0135711 Msil_2561
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0134894 Msil_3226
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0134873 Msil_3287
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0215367 Msil_0371
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0214822 Msil_2976
SC S33 unassigned family S33 unassigned peptidases MER0140804 Msil_0074
SC S33 unassigned family S33 unassigned peptidases MER0139665 Msil_0740
SC S33 unassigned family S33 unassigned peptidases MER0139033 metX Msil_1023
SC S33 unassigned family S33 unassigned peptidases MER0137359 Msil_1464
SC S33 unassigned family S33 unassigned peptidases MER0136125 Msil_1984
SC S33 unassigned family S33 unassigned peptidases MER0136031 Msil_2065
SC S33 unassigned family S33 unassigned peptidases MER0135971 Msil_2079
SC S33 unassigned family S33 unassigned peptidases MER0135944 Msil_2190
SC S33 unassigned family S33 unassigned peptidases MER0135797 Msil_2478
SC S33 unassigned family S33 unassigned peptidases MER0143476 Msil_2945
SC S33 unassigned family S33 unassigned peptidases MER0125920 Msil_3584
SC S33 unassigned family S33 unassigned peptidases MER0124887 Msil_3731
SC S33 unassigned family S33 unassigned peptidases MER0122357 Msil_3878
SE S11 S11.A01 penP g.p. (Bacillus subtilis) MER0140671 Msil_0088
SE S11 unassigned family S11 unassigned peptidases MER0123921 Msil_0544
SE S11 unassigned family S11 unassigned peptidases MER0139640 Msil_0750
SE S11 unassigned family S11 unassigned peptidases MER0137481 Msil_1367
SE S12 S12.006 class C beta-lactamase MER0136949 Msil_1624
SE S12 S12.012 AmpH protein (Escherichia-type) MER0139542 Msil_0928
SE S12 unassigned family S12 unassigned peptidases MER0137838 Msil_0126
SE S12 unassigned family S12 unassigned peptidases MER0125581 Msil_3600
SF S24 S24.001 repressor LexA MER0144799 lexA Msil_1678
SF S24 unassigned family S24 unassigned peptidases MER0135062 Msil_3040
SF S26 S26.001 signal peptidase I MER0143266 Msil_0992
SJ S16 S16.001 Lon-A peptidase MER0135508 Msil_2915
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0140213 Msil_0415
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0139721 Msil_0664
SJ S16 unassigned family S16 unassigned peptidases MER0140329 lon Msil_3172
SK S14 S14.001 peptidase Clp (type 1) MER0125392 clpP Msil_2913
SK S41 S41.004 C-terminal processing peptidase-3 MER0126762 Msil_0643
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER0136388 Msil_0143
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER0136681 Msil_1546
SK S49 unassigned subfamily S49B unassigned peptidases MER1353821
ST S54 non-peptidase homologue family S54 non-peptidase homologues MER1076728 Msil_0720
U- U56 U56.001 homomultimeric peptidase MER0142609 Msil_3309
U- U74 unassigned family U74 unassigned peptidases MER1022893

GENOME ANALYSIS: Comparison with 219 completely sequenced genomes from order Rhizobiales
Family Comment
A31 significant presence (2 homologues)
C15 significant presence (1 homologues)
S10 significant presence (1 homologues)
S53 significant presence (4 homologues)
U56 significant presence (1 homologues)
U74 significant presence (1 homologues)