Shewanella halifaxensis

Taxonomy
Taxonomy database identifier: 271098
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Alteromonadales
Genus Shewanella
Family Shewanellaceae
Species halifaxensis
Peptidase View peptidase sequences from Shewanella halifaxensis
Count of known and putative peptidases: 102, non-peptidase homologues 32
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 A08.001 signal peptidase II MER0139809 lspA Shal_1132
AD A24 A24.001 type 4 prepilin peptidase 1 MER0115512 Shal_0468
AD A24 A24.019 ComC peptidase MER0426917 Shal_2284
AE A31 unassigned family A31 unassigned peptidases MER0117075 Shal_2264
CA C93 unassigned family C93 unassigned peptidases MER0394424 Shal_3927
CL C60 unassigned subfamily C60A unassigned peptidases MER0734131 Shal_1737
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0244079 Shal_1622
CL C82 C82.A03 YnhG protein (Escherichia coli) MER0461362 Shal_1015
CO C40 C40.004 spr peptidase MER0115580 Shal_0052
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0335713 pepN Shal_2363
MA M1 M01.031 cold-active aminopeptidase (Colwellia psychrerythraea)-type peptidase MER0162450 Shal_3055
MA M1 unassigned family M1 unassigned peptidases MER0125708 Shal_0877
MA M3 M03.004 oligopeptidase A MER0115573 Shal_0193
MA M3 unassigned subfamily M3A unassigned peptidases MER0142029 Shal_2430
MA M3 unassigned subfamily M3A unassigned peptidases MER0122540 Shal_2942
MA M4 M04.018 stearolysin MER0117663 Shal_3483
MA M6 unassigned family M6 unassigned peptidases MER0115577 Shal_0094
MA M9 unassigned subfamily M9A unassigned peptidases MER0115584 Shal_0031
MA M9 unassigned subfamily M9A unassigned peptidases MER0125615 Shal_2840
MA M9 unassigned subfamily M9A unassigned peptidases MER0162513 Shal_3056
MA M11 unassigned family M11 unassigned peptidases MER0466338 Shal_2503
MA M12 unassigned subfamily M12A unassigned peptidases MER0824119 Shal_2503
MA M13 unassigned family M13 unassigned peptidases MER0117161 Shal_3258
MA M13 unassigned family M13 unassigned peptidases MER0117916 Shal_3310
MA M32 unassigned family M32 unassigned peptidases MER0118566 Shal_0968
MA M41 M41.001 FtsH peptidase MER0123681 ftsH Shal_3154
MA M48 M48.002 HtpX peptidase MER0120034 htpX Shal_2473
MA M61 unassigned family M61 unassigned peptidases MER0120432 Shal_3062
MA M66 unassigned family M66 unassigned peptidases MER0119351 Shal_3479
MA M90 unassigned family M90 unassigned peptidases MER0229064 Shal_1355
MA M98 M98.001 YghJ g.p. (Escherichia coli) MER0206295 Shal_3494
MC M14 non-peptidase homologue subfamily M14D non-peptidase homologues MER0309087 Shal_2025
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0115570 Shal_0246
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0468998 Shal_4181
MD M15 unassigned family M15 unassigned peptidases MER0469539 Shal_2311
MD M74 unassigned family M74 unassigned peptidases MER0115504 Shal_0604
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0115564 Shal_0320
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0115565 Shal_0320
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0177150 Shal_1240
ME M16 unassigned subfamily M16A unassigned peptidases MER0139233 Shal_2664
ME M16 unassigned subfamily M16B unassigned peptidases MER0115566 Shal_0319
ME M16 unassigned subfamily M16B unassigned peptidases MER0177149 Shal_1240
MF M17 M17.003 PepA aminopeptidase MER0126564 pepA1 Shal_0962
MF M17 M17.004 PepB aminopeptidase MER0160649 Shal_0756
MF M17 unassigned family M17 unassigned peptidases MER0118489 Shal_2845
MF M17 unassigned family M17 unassigned peptidases MER0117820 pepA2 Shal_3903
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0162246 Shal_2982
MG M24 M24.003 Xaa-Pro dipeptidase (bacteria-type) MER0115585 pepQ Shal_0017
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0115575 Shal_0168
MG M24 unassigned subfamily M24B unassigned peptidases MER0139039 Shal_2548
MG M24 unassigned subfamily M24B unassigned peptidases MER0481720 Shal_0972
MG M24 unassigned subfamily M24B unassigned peptidases MER0177048 Shal_0974
MH M20 M20.003 peptidase T MER0119251 pepT Shal_3033
MH M20 M20.007 Xaa-His dipeptidase MER0122901 Shal_3175
MH M20 M20.974 acetylornithine deacetylase ArgE MER0805677 Shal_4094
MH M20 M20.A08 YgeY protein (Escherichia coli) MER0115498 Shal_0637
MH M20 non-peptidase homologue subfamily M20A non-peptidase homologues MER0806829 Shal_2429
MH M20 unassigned subfamily M20B unassigned peptidases MER0122135 Shal_3347
MH M20 unassigned family M20D unassigned peptidases MER0115574 Shal_0171
MH M20 unassigned family M20D unassigned peptidases MER0162321 Shal_3019
MH M28 unassigned subfamily M28E unassigned peptidases MER0119350 Shal_1674
MH M28 unassigned family M28 unassigned peptidases MER0115503 Shal_0629
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0115760 Shal_0010
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0115561 Shal_0398
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0115489 Shal_0638
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0115481 Shal_0649
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0872830 Shal_2947
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0869532 Shal_3104
MJ M38 unassigned family M38 unassigned peptidases MER0115578 hutI Shal_0071
MM M50 unassigned subfamily M50B unassigned peptidases MER0118206 Shal_0696
MM M50 unassigned subfamily M50B unassigned peptidases MER0895749 Shal_2974
MO M23 M23.011 YebA peptidase MER0161806 Shal_2702
MO M23 M23.014 ShyA D,D-endopeptidase (Vibrio cholerae) MER0124562 Shal_1044
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0115581 Shal_0042
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0478350 Shal_1229
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0161632 Shal_2509
MO M23 unassigned subfamily M23B unassigned peptidases MER0115513 Shal_0462
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0124884 Shal_3832
MU M103 M103.UNW family M103 non-peptidase homologues MER0117709 Shal_3825
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0327272
PA S1 unassigned subfamily S1C unassigned peptidases MER0280351 Shal_3686
PA S1 unassigned subfamily S1C unassigned peptidases MER0208508 Shal_3687
PA S46 S46.003 dipeptidyl-peptidase BII (Pseudoxanthomonas mexicana) MER0118664 Shal_0732
PA S46 S46.003 dipeptidyl-peptidase BII (Pseudoxanthomonas mexicana) MER0118823 Shal_3671
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0117819 Shal_2637
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0458025 asnB Shal_1673
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0162913 Shal_4285
PB C59 C59.001 penicillin V acylase precursor MER0115505 Shal_0591
PB C59 non-peptidase homologue family C59 non-peptidase homologues MER0914442 Shal_1849
PB S45 S45.003 cephalosporin C acylase precursor MER1064846 Shal_3015
PB T1 T01.006 HslV component of HslUV peptidase MER0139040 hslV Shal_3866
PB T2 unassigned family T2 unassigned peptidases MER0177300 Shal_1845
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0122420 Shal_2420
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0438698 Shal_3613
PC C26 C26.960 TrpD protein (anthranilate synthase component II) MER0439368 Shal_1657
PC C26 C26.961 PuuD protein MER0448259 Shal_0994
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0444904 hisH Shal_1820
PC C26 unassigned family C26 unassigned peptidases MER0441762 carA Shal_3162
PC C26 unassigned family C26 unassigned peptidases MER0449586 Shal_3872
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0115576 Shal_0163
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0115563 Shal_0345
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0160774 Shal_0868
PC S51 non-peptidase homologue family S51 non-peptidase homologues MER1047869 Shal_1667
SB S8 S08.125 AspA (Aeromonas sobria)-type peptidase MER0115568 Shal_0292
SB S8 unassigned subfamily S8A unassigned peptidases MER0191835 Shal_0969
SB S8 unassigned subfamily S8A unassigned peptidases MER0177368 Shal_1979
SC S9 S09.009 dipeptidyl-peptidase 4 (bacteria-type 1) MER0122007 Shal_0785 Shal_0785
SC S9 S09.010 oligopeptidase B MER0123995 Shal_4186
SC S9 S09.012 dipeptidyl-peptidase 5 MER0123095 Shal_2255
SC S9 S09.021 glutamyl endopeptidase C MER0124561 Shal_1040
SC S9 S09.941 highly similar to acyl-protein thioesterase 1 (Homo sapiens) MER0210046 Shal_2391
SC S9 S09.A40 YqiA protein (Escherichi coli) MER0213547 Shal_3653
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0125799 Shal_2869
SC S9 unassigned subfamily S9A unassigned peptidases MER0123651 Shal_1686
SC S9 unassigned subfamily S9B unassigned peptidases MER0124675 Shal_3612
SC S9 unassigned subfamily S9B unassigned peptidases MER1001421 Shal_4032
SC S9 unassigned subfamily S9C unassigned peptidases MER0123404 Shal_3492
SC S9 unassigned family S9 unassigned peptidases MER0115572 Shal_0227
SC S9 unassigned family S9 unassigned peptidases MER0115514 Shal_0425
SC S9 unassigned family S9 unassigned peptidases MER0123476 Shal_3068
SC S9 unassigned family S9 unassigned peptidases MER0209976 Shal_3072
SC S9 unassigned family S9 unassigned peptidases MER0123793 Shal_4005
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1021334 Shal_3612
SC S33 S33.001 prolyl aminopeptidase MER0115562 Shal_0361
SC S33 S33.002 tripeptidyl-peptidase A MER0115579 Shal_0062
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0215460 Shal_2516
SC S33 unassigned family S33 unassigned peptidases MER0115571 bioH Shal_0244
SC S33 unassigned family S33 unassigned peptidases MER0115567 Shal_0296
SC S33 unassigned family S33 unassigned peptidases MER0208912 Shal_1831
SC S33 unassigned family S33 unassigned peptidases MER0208847 Shal_3130
SE S11 unassigned family S11 unassigned peptidases MER0120505 Shal_3238
SE S12 unassigned family S12 unassigned peptidases MER0421873 Shal_1270
SE S12 unassigned family S12 unassigned peptidases MER0177477 Shal_2040
SE S12 unassigned family S12 unassigned peptidases MER0421874 Shal_3265
SE S13 S13.001 D-Ala-D-Ala peptidase C MER0120431 Shal_2055
SF S24 S24.001 repressor LexA MER0115569 lexA Shal_0260
SF S24 S24.003 UmuD protein MER0120033 Shal_2184
SF S26 S26.001 signal peptidase I MER0116929 Shal_1082
SF S26 S26.026 PA1303 peptidase (Pseudomonas sp.) MER0126565 Shal_4184
SJ S16 S16.001 Lon-A peptidase MER0119630 Shal_2766
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0472437 Shal_3120
SJ S16 S16.A10 ycbZ (Escherichia coli) MER0161394 Shal_2347
SJ S16 unassigned family S16 unassigned peptidases MER1040052 Shal_2152
SK S14 S14.001 peptidase Clp (type 1) MER0117240 clpP Shal_2768
SK S41 S41.001 C-terminal processing peptidase-1 MER0118303 Shal_2364
SK S41 S41.001 C-terminal processing peptidase-1 MER0118304 Shal_2364
SK S41 S41.004 C-terminal processing peptidase-3 MER0115582 Shal_0041
SK S41 non-peptidase homologue subfamily S41B non-peptidase homologues MER0177184 Shal_1249
SK S41 non-peptidase homologue subfamily S41B non-peptidase homologues MER0177187 Shal_1249
SK S41 non-peptidase homologue family S41 non-peptidase homologues MER0177185 Shal_1249
SK S41 non-peptidase homologue family S41 non-peptidase homologues MER0177186 Shal_1249
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER0117787 Shal_2612
SK S49 unassigned subfamily S49B unassigned peptidases MER0141084 Shal_2029
SK S49 unassigned subfamily S49C unassigned peptidases MER1073136 Shal_1643
ST S54 unassigned family S54 unassigned peptidases MER1073932 Shal_4218
ST S54 unassigned family S54 unassigned peptidases MER1075123 Shal_1934
U- U32 U32.002 collagenase (Helicobacter-type) MER0123847 Shal_3100
U- U32 U32.003 collagenase (Salmonella-type) MER0126256 Shal_0816
U- U32 unassigned family U32 unassigned peptidases MER0144535 Shal_2154
U- U32 unassigned family U32 unassigned peptidases MER0141779 Shal_3109

GENOME ANALYSIS: Comparison with 24 completely sequenced genomes from family Shewanellaceae
Family Comment
M66 significant presence (1 homologues)
M98 significant presence (1 homologues)