Salinispora tropica

Taxonomy
Taxonomy database identifier: 168695
Superkingdom Bacteria
Phylum Firmicutes
Class Actinobacteria
Subclass Actinobacteridae
Order Actinomycetales
Suborder Micromonosporineae
Family Micromonosporaceae
Species tropica
Genus Salinispora
Peptidase View peptidase sequences from Salinispora tropica
Count of known and putative peptidases: 142, non-peptidase homologues 68
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0085933 lspA Strop_3202
AD A24 unassigned subfamily A24A unassigned peptidases MER0085973 Strop_4495
AD A24 unassigned subfamily A24A unassigned peptidases MER0085974 Strop_4462
CA C2 unassigned subfamily C2A unassigned peptidases MER0242146 Strop_0483
CL C60 unassigned subfamily C60A unassigned peptidases MER0085935 Strop_0051
CL C60 unassigned family C60 unassigned peptidases MER0085961 Strop_4206
CL C60 unassigned family C60 unassigned peptidases MER0085962 Strop_3604
CL C60 unassigned family C60 unassigned peptidases MER0085967 Strop_3534
CL C60 unassigned family C60 unassigned peptidases MER0086008 Strop_1734
CL C82 unassigned subfamily C82A unassigned peptidases MER0124122 Strop_2100
CL C82 unassigned subfamily C82A unassigned peptidases MER0463058 Strop_1128
CO C40 C40.007 YddH peptidase MER0092719 Strop_0055
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0092809 Strop_3579
CO C40 unassigned family C40 unassigned peptidases MER0092824 Strop_4086
G- G5 unassigned family G5 unassigned peptidases MER0936394 Strop_2460
G- G5 unassigned family G5 unassigned peptidases MER0092825 Strop_4120
MA M1 M01.009 aminopeptidase N (actinomycete-type) MER0085968 Strop_3517
MA M1 M01.012 aminopeptidase G MER0085947 Strop_3475
MA M1 M01.032 lysyl aminopeptidase 1 (Streptomyces sp.) MER0085993 Strop_3835
MA M41 M41.015 MsFtsH g.p. (Mycobacterium smegmatis) MER0092829 ftsH Strop_4308
MA M48 unassigned subfamily M48A unassigned peptidases MER0092774 Strop_2298
MA M48 unassigned subfamily M48A unassigned peptidases MER0085940 Strop_3283
MA M48 unassigned subfamily M48B unassigned peptidases MER0086006 htpX Strop_0406
MA M48 unassigned family M48 unassigned peptidases MER0085926 Strop_3958
MC M14 M14.007 carboxypeptidase T MER0085996 Strop_4082
MC M14 M14.007 carboxypeptidase T MER1230987
MC M14 M14.007 carboxypeptidase T MER1235842
MC M14 non-peptidase homologue subfamily M14A non-peptidase homologues MER1236121
MC M14 unassigned subfamily M14A unassigned peptidases MER0086009 Strop_1703
MC M14 unassigned subfamily M14A unassigned peptidases MER1231741
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0085963 Strop_3569
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0085965 Strop_3568
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0085982 Strop_3746
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0085983 Strop_3747
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0085964 Strop_3568
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0085981 Strop_3746
ME M16 unassigned subfamily M16B unassigned peptidases MER0086015 Strop_1382
ME M16 unassigned subfamily M16C unassigned peptidases MER0085980 Strop_2738
MF M17 unassigned family M17 unassigned peptidases MER0085942 pepA Strop_3317
MF M17 unassigned family M17 unassigned peptidases MER0086001 Strop_0710
MG M24 M24.033 aminopeptidase P (Streptomyces-type) MER0085955 Strop_3058
MG M24 M24.033 aminopeptidase P (Streptomyces-type) MER0086005 Strop_0463
MG M24 M24.A06 At4g37040 (Arabidopsis thaliana)-type peptidase MER0086017 Strop_1362
MG M24 unassigned subfamily M24A unassigned peptidases MER0085988
MG M24 unassigned subfamily M24A unassigned peptidases MER0085995 Strop_3901
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0085956 Strop_3053
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0092748 Strop_1109
MH M20 unassigned family M20D unassigned peptidases MER0085938 Strop_2416
MH M20 unassigned family M20D unassigned peptidases MER0085998 Strop_0833
MH M20 unassigned subfamily M20F unassigned peptidases MER0085966 Strop_3551
MH M20 unassigned family M20 unassigned peptidases MER0085948 Strop_2159
MH M20 unassigned family M20 unassigned peptidases MER0092106 Strop_3752
MH M28 M28.003 aminopeptidase S (Streptomyces-type) MER0086014
MH M42 unassigned family M42 unassigned peptidases MER0085945 Strop_0915
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0092720 Strop_0081
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0092727 Strop_0245
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0092747 Strop_1108
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0092755 Strop_1522
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0092764 Strop_1854
MJ M38 unassigned family M38 unassigned peptidases MER0092746 hutI Strop_1107
MJ M38 unassigned family M38 unassigned peptidases MER0092750 Strop_1302
MM M50 unassigned subfamily M50B unassigned peptidases MER0085941 Strop_3311
MM M50 unassigned subfamily M50B unassigned peptidases MER0085946 Strop_3400
MM M50 unassigned subfamily M50B unassigned peptidases MER0085950 Strop_2237
MM M50 unassigned subfamily M50B unassigned peptidases MER0086018 Strop_1351
MM M50 unassigned family M50 unassigned peptidases MER0092775 Strop_2431
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0086019 Strop_1314
MO M23 unassigned subfamily M23B unassigned peptidases MER0085977 Strop_4302
MO M23 unassigned subfamily M23B unassigned peptidases MER0085991 Strop_3815
MO M23 unassigned subfamily M23B unassigned peptidases MER0085992 Strop_3816
MP M67 M67.009 Mec peptidase MER0092745 Strop_1100
MT M81 unassigned family M81 unassigned peptidases MER0223137 Strop_4334
MU M103 M103.UNW family M103 non-peptidase homologues MER0085987 Strop_3766
MU M103 M103.UPW family M103 unassigned peptidases MER0085957
MU M103 M103.UPW family M103 unassigned peptidases MER0085986 Strop_3765
PA S1 S01.121 hypodermin C MER0085939 Strop_2873
PA S1 S01.494 Htra2 peptidase (Mycobacterium-type) MER0085929 Strop_3684
PA S1 S01.494 Htra2 peptidase (Mycobacterium-type) MER0086000 Strop_0712
PA S1 S01.494 Htra2 peptidase (Mycobacterium-type) MER0086021 Strop_1248
PA S1 S01.513 MarP peptidase (Mycobacterium tuberculosis) MER0085975 Strop_4316
PA S1 non-peptidase homologue subfamily S1A non-peptidase homologues MER0085931 Strop_3124
PA S1 non-peptidase homologue subfamily S1A non-peptidase homologues MER0085954 Strop_3119
PA S1 unassigned subfamily S1A unassigned peptidases MER0085937 Strop_0149
PA S1 unassigned subfamily S1C unassigned peptidases MER0086010 Strop_1529
PA S1 unassigned subfamily S1E unassigned peptidases MER0085959 Strop_2955
PA S1 unassigned subfamily S1E unassigned peptidases MER0092789 Strop_2942
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0092740 Strop_0917
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0092768 Strop_2108
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0092795 Strop_3057
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0092799 Strop_3167
PB C44 C44.A01 At2g16570 (Arabidopsis thaliana) MER0092726 Strop_0154
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0092819 Strop_3860
PB C44 unassigned family C44 unassigned peptidases MER0092759 Strop_1632
PB C44 unassigned family C44 unassigned peptidases MER0092769 Strop_2115
PB C44 unassigned family C44 unassigned peptidases MER0092778 Strop_2541
PB S45 S45.003 cephalosporin C acylase precursor MER0092779 Strop_2556
PB S45 S45.003 cephalosporin C acylase precursor MER0092834 Strop_4404
PB S45 S45.005 aculeacin A acylase MER0085989 Strop_3778
PB T1 T01.005 bacterial proteasome, beta component MER0085944 prcB1 Strop_1015
PB T1 T01.005 bacterial proteasome, beta component MER0085951 prcB2 Strop_2244
PB T1 T01.980 bacterial proteasome, alpha subunit MER0085952 prcA Strop_2245
PB T1 unassigned subfamily T1A unassigned peptidases MER1364347
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0092776 Strop_2446
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0092718 Strop_0049
PC C26 C26.957 GMP synthase MER0092816 guaA Strop_3833
PC C26 C26.964 CTP synthetase MER0092767 pyrG Strop_1920
PC C26 C26.A32 imidazoleglycerol-phosphate synthase (Pyrococcus furiosus) MER0092762 pdxT Strop_1791
PC C26 non-peptidase homologue family C26 non-peptidase homologues MER0085949 Strop_2184
PC C26 unassigned family C26 unassigned peptidases MER0092725 Strop_0151
PC C26 unassigned family C26 unassigned peptidases MER0092791 Strop_2960
PC C26 unassigned family C26 unassigned peptidases MER0092800 hisH Strop_3192
PC C26 unassigned family C26 unassigned peptidases MER0444187 carA Strop_1855
PC C26 unassigned family C26 unassigned peptidases MER0451434 cobQ Strop_3554
PC C56 C56.001 PfpI peptidase MER0085960 Strop_4193
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0092723 Strop_0093
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0092787 Strop_2875
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0092722 Strop_0092
PC C56 unassigned family C56 unassigned peptidases MER0092761 Strop_1713
PC S51 non-peptidase homologue family S51 non-peptidase homologues MER0085990 Strop_3782
PE T5 unassigned family T5 unassigned peptidases MER0092766 argJ Strop_1889
SB S8 S08.026 nasp peptidase MER0092738 Strop_0881
SB S8 S08.051 aqualysin 1 MER0085934 Strop_0039
SB S8 S08.069 SAM-P45 peptidase MER0085984 Strop_3754
SB S8 S08.091 tripeptidyl-peptidase S MER0085927 Strop_4224
SB S8 S08.121 cytotoxin SubAB MER0086004 Strop_0471
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER1283774
SB S8 unassigned subfamily S8A unassigned peptidases MER0085958 Strop_3040
SB S8 unassigned subfamily S8A unassigned peptidases MER0085976 Strop_4314
SB S8 unassigned subfamily S8A unassigned peptidases MER0085972 Strop_0271
SB S8 unassigned subfamily S8A unassigned peptidases MER0086007 Strop_0305
SB S8 unassigned subfamily S8A unassigned peptidases MER0086003 Strop_0480
SB S8 unassigned subfamily S8A unassigned peptidases MER0086013
SB S8 unassigned subfamily S8A unassigned peptidases MER0086012 Strop_1465
SB S8 unassigned subfamily S8A unassigned peptidases MER0086011 Strop_1466
SC S9 S09.010 oligopeptidase B MER0085997 Strop_4105
SC S9 S09.073 Xaa-Pro dipeptidylpeptidase MER0085985 Strop_3764
SC S9 S09.951 brefeldin A esterase MER0092777 Strop_2479
SC S9 S09.B04 BSU23640 g.p. (Bacillus subtilis) MER0092730 Strop_0439
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0092739 Strop_0898
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0092741 Strop_0990
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0092758 Strop_1627
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0092792 Strop_2963
SC S9 unassigned subfamily S9C unassigned peptidases MER0092790 Strop_2943
SC S9 unassigned subfamily S9C unassigned peptidases MER0092793 Strop_2969
SC S9 unassigned subfamily S9C unassigned peptidases MER0092813 Strop_3715
SC S9 unassigned family S9 unassigned peptidases MER0092812 Strop_3616
SC S9 unassigned family S9 unassigned peptidases MER0092837 Strop_4466
SC S9 unassigned family S9 unassigned peptidases MER0092839 Strop_4527
SC S9 unassigned family S9 unassigned peptidases MER0085953 Strop_2293
SC S15 unassigned family S15 unassigned peptidases MER0092728 Strop_0256
SC S15 unassigned family S15 unassigned peptidases MER0085932 Strop_3127
SC S33 S33.001 prolyl aminopeptidase MER0092780 Strop_2620
SC S33 S33.002 tripeptidyl-peptidase A MER0092772 Strop_2212
SC S33 S33.991 CPO-A2 (Streptomyces aureofaciens)-type chloroperoxidase MER0092826 Strop_4189
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0092721 Strop_0083
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0092729 Strop_0319
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0092743 Strop_1065
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0092744 Strop_1066
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0092763 Strop_1800
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0092771 Strop_2177
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0092782 Strop_2711
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0092788 Strop_2903
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0092794 Strop_2973
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0092796 Strop_3108
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0092807 Strop_3441
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0092823 Strop_4044
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0092832 Strop_4389
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0092836 Strop_4425
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER1342233
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0211265 Strop_2791
SC S33 unassigned family S33 unassigned peptidases MER0092735 Strop_0621
SC S33 unassigned family S33 unassigned peptidases MER0092742 salF
SC S33 unassigned family S33 unassigned peptidases MER0092756 Strop_1545
SC S33 unassigned family S33 unassigned peptidases MER0092760 Strop_1678
SC S33 unassigned family S33 unassigned peptidases MER0092781 Strop_2670
SC S33 unassigned family S33 unassigned peptidases MER0092783 Strop_2763
SC S33 unassigned family S33 unassigned peptidases MER0092784 Strop_2777
SC S33 unassigned family S33 unassigned peptidases MER0092786 Strop_2817
SC S33 unassigned family S33 unassigned peptidases MER0092805 Strop_3365
SC S33 unassigned family S33 unassigned peptidases MER0092806 Strop_3387
SC S33 unassigned family S33 unassigned peptidases MER0092808 Strop_3558
SC S33 unassigned family S33 unassigned peptidases MER0092815 Strop_3803
SC S33 unassigned family S33 unassigned peptidases MER0092818 Strop_3856
SC S33 unassigned family S33 unassigned peptidases MER0092821 Strop_3996
SC S33 unassigned family S33 unassigned peptidases MER0092822 Strop_3997
SE S11 S11.A01 penP g.p. (Bacillus subtilis) MER0092753 Strop_1457
SE S11 unassigned family S11 unassigned peptidases MER0092754 Strop_1458
SE S11 unassigned family S11 unassigned peptidases MER0085979 Strop_2475
SE S11 unassigned family S11 unassigned peptidases MER0092798 Strop_3133
SE S11 unassigned family S11 unassigned peptidases MER0085978 Strop_2464
SE S12 S12.003 alkaline D-peptidase MER0085928 Strop_2043
SE S12 S12.003 alkaline D-peptidase MER0092820 Strop_3984
SE S12 unassigned family S12 unassigned peptidases MER0092731 Strop_0502
SE S12 unassigned family S12 unassigned peptidases MER0092736 Strop_0635
SE S12 unassigned family S12 unassigned peptidases MER0092833 Strop_4393
SE S13 unassigned family S13 unassigned peptidases MER0092830 Strop_4312
SF S24 S24.001 repressor LexA MER0092752 lexA Strop_1451
SF S26 S26.025 signal peptidase sipX MER0086020 Strop_1310
SF S26 S26.025 signal peptidase sipX MER0086022 Strop_1311
SF S26 S26.026 PA1303 peptidase (Pseudomonas sp.) MER0085930 Strop_3696
SJ S16 S16.012 SepM peptidase (Streptococcus mutans) MER0092814 Strop_3730
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0092827 Strop_4269
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1032191 Strop_1319
SK S14 S14.008 ClpP1 peptidase (Streptomyces-type) MER0085969
SK S14 S14.008 ClpP1 peptidase (Streptomyces-type) MER0086002 clpP1 Strop_0695
SK S14 S14.009 ClpP2 peptidase (Streptomyces-type) MER0085970 clpP2 Strop_3498
SS S66 S66.001 murein tetrapeptidase LD-carboxypeptidase (Pseudomonas-type) MER0085943 Strop_3337
ST S54 S54.029 rhomboid peptidase 2 (Mycobacterium sp.) MER0092737 Strop_0870
ST S54 S54.A08 At1g25290 (Arabidopsis thaliana) MER0092838 Strop_4481
U- U72 U72.001 Dop isopeptidase MER0398104
U- U72 U72.001 Dop isopeptidase MER0402661

GENOME ANALYSIS: Comparison with 28 completely sequenced genomes from family Micromonosporaceae
Family Comment
C2 significant presence (1 homologues)
C40 significant decrease in homologues (3 homologues)
C44 lineage specific expansion (9 homologues)
C56 lineage specific expansion (5 homologues)
C82 significant decrease in homologues (2 homologues)
G5 significant presence (2 homologues)
M23 significant decrease in homologues (4 homologues)
M81 significant presence (1 homologues)
S8 significant decrease in homologues (14 homologues)
S33 lineage specific expansion (34 homologues)
T1 lineage specific expansion (4 homologues)