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Shigella dysenteriae

Taxonomy
Taxonomy database identifier: 622
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Enterobacteriales
Family Enterobacteriaceae
Genus Shigella
Species dysenteriae
Peptidase View peptidase sequences from Shigella dysenteriae
Count of known and putative peptidases: 204, non-peptidase homologues 38
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 A08.001 signal peptidase II MER0059017 lspA SDY_0049
AD A24 A24.003 type 4 prepilin peptidase 2 MER0332896 WRSd3_01459 SD1617_2122
AD A24 A24.A10 gspO g.p. (Escherichia coli) MER0143395 gspO Sd1012_0309
AD A24 unassigned subfamily A24A unassigned peptidases MER0692339 WRSd3_01362
AE A31 A31.001 HybD peptidase MER0059078 hybD/hybD2 SDY_3080
AE A31 A31.002 HyaD peptidase MER0059037 hyaD SDY_0950
AE A31 A31.003 HycI peptidase MER0059075 hycI SDY_2914
AF A26 A26.005 IcsP peptidase (Shigella flexneri) MER0059110 icsP SDY_P224
AF A26 unassigned family A26 unassigned peptidases MER1159411 icsP
AF A26 unassigned family A26 unassigned peptidases MER1159481 icsP
AF A26 unassigned family A26 unassigned peptidases MER1159346
C- C118 C118.UPW family C118 homologues, unassigned MER0750822
C- C118 C118.UPW family C118 homologues, unassigned MER0751115
C- C118 C118.UPW family C118 homologues, unassigned MER0751468
C- C118 C118.UPW family C118 homologues, unassigned MER0751446
CE C79 C79.001 ElaD peptidase (Escherichia-type) MER0232505 Sd1012_0527
CE C79 C79.001 ElaD peptidase (Escherichia-type) MER0232909 SD1617_1495
CE C79 unassigned family C79 unassigned peptidases MER0318786 elaD SD22575_3027
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0243791 yafK SDY_0250
CL C82 C82.A02 ECBD_1659 protein (Escherichia coli) MER0461102 erfK SDY_2243
CL C82 C82.A03 YnhG protein (Escherichia coli) MER0462873 ynhG SDY_1909
CL C82 C82.A04 YbiS protein (Escherichia coli) MER0461126 ybiS SDY_0777
CL C82 C82.A05 YcfS protein (Escherichia coli) MER0462917 ycfS SDY_2037
CL C82 unassigned subfamily C82A unassigned peptidases MER0462874 SDB_01861
CO C40 C40.004 spr peptidase MER0059036 spr SDY_0904
CO C40 C40.A01 NlpC protein (Escherichia coli) MER0059052 nlpC SDY_1803
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0059053 ydhO SDY_1881
CO C40 unassigned family C40 unassigned peptidases MER0378040 SDB_00796
CO C40 unassigned family C40 unassigned peptidases MER0059022 yafL SDY_0253
CO C40 unassigned family C40 unassigned peptidases MER0177838
G- G5 unassigned family G5 unassigned peptidases MER0938633 Sd1012_3065
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0356400 ybaP SDY_0436
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0059061 pepN SDY_2325
MA M3 M03.004 oligopeptidase A MER0059092 SD1617_2201
MA M3 M03.004 oligopeptidase A MER1187190
MA M3 M03.005 peptidyl-dipeptidase Dcp MER0059048 dcp SDY_1587
MA M41 M41.001 FtsH peptidase MER0059085 hflB SDY_3359
MA M48 M48.002 HtpX peptidase MER0059055 htpX SDY_1977
MA M48 M48.022 low osmolarity induced peptidase MER0059079 yggG SDY_3140
MA M48 M48.023 BepA (Escherichia coli) MER0059069 SDY_2683
MA M48 M48.A03 YcaL protein (Escherichia coli) MER0059062 ycaL SDY_2349
MA M90 M90.001 MtfA peptidase MER0217875 mtfA SD22575_1246
MC M14 M14.034 murein peptide amidase MpaA MER0469420 SD15574_0416
MC M14 M14.034 murein peptide amidase MpaA MER0469203 SD15574_0415
MC M14 M14.034 murein peptide amidase MpaA MER0037356 ycjI SDY_1404
MD M15 non-peptidase homologue family M15 non-peptidase homologues MER0508723
MD M15 unassigned subfamily M15C unassigned peptidases MER0137677 Sd1012_4186
MD M15 unassigned subfamily M15D unassigned peptidases MER0279563 ddpX SDB_01010
MD M74 M74.001 murein endopeptidase MER0059065 mepA SDY_2527
MD M74 M74.001 murein endopeptidase MER1262199
ME M16 M16.001 pitrilysin MER0079944 ptrA SD22575_3746
ME M16 M16.A05 PqqL protein (Escherichi coli) MER0392791 SDB_01003
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0059108 yhjJ SDY_4547
ME M16 unassigned subfamily M16A unassigned peptidases MER0603734
MF M17 M17.003 PepA aminopeptidase MER0059104 pepA SDY_4284
MF M17 M17.004 PepB aminopeptidase MER0059071 pepB SDY_2719
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0058238 map SD1617_3653
MG M24 M24.003 Xaa-Pro dipeptidase (bacteria-type) MER0059098 pepQ SDY_3898
MG M24 M24.004 aminopeptidase P (bacteria) MER0059080 pepP SDY_3173
MG M24 M24.004 aminopeptidase P (bacteria) MER0683001
MH M20 M20.003 peptidase T MER0059057 pepT SDY_2025
MH M20 M20.007 Xaa-His dipeptidase MER0059028 pepD SDY_0480
MH M20 M20.010 DapE peptidase MER0059068 dapE SDY_2656
MH M20 M20.020 p-aminobenzoyl-glutamate hydrolase subunit A MER0374124 SDB_03185
MH M20 M20.974 acetylornithine deacetylase ArgE MER0059096 argE SDY_3792
MH M20 M20.976 allantoate amidohydrolase MER0849480 allC
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0845290 SD22575_1719
MH M20 unassigned family M20D unassigned peptidases MER0143010 Sd1012_0328
MH M20 unassigned family M20D unassigned peptidases MER0372679 SDY_3770
MH M28 M28.005 IAP aminopeptidase MER0059077 SD1617_2640
MH M42 M42.008 YpdE-type putative peptidase MER0059066 SDY_2583
MH M42 M42.008 YpdE-type putative peptidase MER0364649 SD22575_3166
MH M42 unassigned family M42 unassigned peptidases MER0113415 SDB_00048
MH M42 unassigned family M42 unassigned peptidases MER0364208 ysdC SDB_00047
MJ M38 M38.001 isoaspartyl dipeptidase (metallo-type) MER0349570 iadA SD22575_0083
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059031 nagA SDY_0611
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0859716 SD15574_0760
MM M50 M50.004 RseP peptidase MER0059020 yaeL SDY_0192
MM M50 M50.004 RseP peptidase MER0508710
MO M23 M23.011 YebA peptidase MER0059040 yebA SDY_1143
MO M23 M23.950 YibP g.p. (Escherichia sp.) MER0059102 yibP SDY_4046
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0059076 nlpD SDY_2941
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0478069 SDB_01514
MP M67 unassigned subfamily M67B unassigned peptidases MER0905593 SD22575_5477/SDB_03132
MP M67 unassigned subfamily M67B unassigned peptidases MER0177839
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0059089 tldD SDY_3420
MU M103 M103.950 microcin-processing peptidase 1 homologue MER0059103 pmbA SD22575_5040
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405588 flhB
ND N4 N04.002 EspP gamma protein autotransporter domain (Escherichi-type) MER0232607 Sd1012_1786
ND N4 N04.002 EspP gamma protein autotransporter domain (Escherichi-type) MER0294693
ND N4 N04.002 EspP gamma protein autotransporter domain (Escherichi-type) MER0294720
ND N4 N04.002 EspP gamma protein autotransporter domain (Escherichi-type) MER0294802 SD1617_0198
ND N4 non-peptidase homologue family N4 non-lyase homologues MER0294940 SD1617_5681
PA S1 S01.260 B1598 peptidase MER0059046 SDY_1555
PA S1 S01.273 DegP peptidase MER0166121 degP SD15574_0226
PA S1 S01.274 DegQ peptidase MER0059088 degQ SDY_3410
PA S1 S01.275 DegS peptidase MER0056741 degS SDY_3411
PA S1 unassigned subfamily S1C unassigned peptidases MER0059019 SD1617_3659
PA S1 unassigned subfamily S1C unassigned peptidases MER0327521 SD1617_2031
PA S6 S06.004 Sat peptidase MER0177525 Sd1012_1786
PA S6 S06.013 SepA peptidase (Shigellai-type) MER0294421
PA S6 unassigned family S6 unassigned peptidases MER0294543
PA S6 unassigned family S6 unassigned peptidases MER1270150
PA S6 unassigned family S6 unassigned peptidases MER1280673
PA S6 unassigned family S6 unassigned peptidases MER1280534
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0059064 purF SDY_2511
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0059087 gltB SDY_3393
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0059101 glmS SDY_4019
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0059030 asnB SDY_0608
PB C44 unassigned family C44 unassigned peptidases MER0045749 wbpS
PB C44 unassigned family C44 unassigned peptidases MER0059021 yafJ SDY_0249
PB S45 S45.001 penicillin G acylase precursor MER0315247 SDB_04378
PB S45 S45.001 penicillin G acylase precursor MER0312025 SDB_04380
PB T1 T01.006 HslV component of HslUV peptidase MER0059097 hslV SDY_3805
PB T2 unassigned family T2 unassigned peptidases MER0059033 ybiK SDY_0759
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0059093 ggt SDB_01814
PC C26 C26.954 carA protein MER0059018 carA SDY_0054
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0059091 pabA SDY_3522
PC C26 C26.957 GMP synthase MER0059070 guaA SDY_2703
PC C26 C26.960 TrpD protein (anthranilate synthase component II) MER0045185 trpD/trpG-TRPD SDY_1331
PC C26 C26.961 PuuD protein MER0438430 puuD SDB_00687
PC C26 C26.964 CTP synthetase MER0448721 pyrG SDY_2997
PC C56 C56.001 PfpI peptidase MER0059082 yfkM/yhbO SDY_3332
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0508724
PC C56 C56.975 ES1 protein homolog, mitochondrial MER0508727
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0730072 hchA/SDB_03208/WRSd3_04454
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0059025 thiJ SDY_0306
PC S51 S51.001 dipeptidase E MER0137567 pepE SD1617_0523
SC S9 S09.010 oligopeptidase B MER0059039 prtB SDB_00010
SC S9 S09.A36 YfhR protein (Escherichi coli) MER0059072 SDY_2730
SC S9 S09.A39 YeiG protein (Escherichi coli) MER0508722
SC S9 S09.A43 YpfH protein (Escherichi coli) MER0209570 SDY_2658
SC S9 S09.A46 YjfP protein (Escherichi coli) MER0059105 yjfP SDY_4359
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER0997224 Sd1012_3616/SD15574_0412
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0059099 SDY_3913
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0210849 fes SDY_0513
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0211299 iroD
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1021632 Sd1012_3617/SD15574_0413
SC S33 S33.A46 YheT protein (Escherichia coli) MER0059090 yheT SDY_3515
SC S33 S33.A54 YnbC protein (Escherichia coli) MER0059051 SDY_1779
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0059032 ybfF SDY_0626
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0059038 rutD SDY_0984
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0059100 pldB SDY_3918
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0508721
SC S33 unassigned family S33 unassigned peptidases MER0059063 menH SDY_2459
SC S33 unassigned family S33 unassigned peptidases MER0059095 bioH SDY_3663
SE S11 S11.002 murein-DD-endopeptidase MER0059058 pbpG UMNK88_2678
SE S11 S11.003 penicillin-binding protein 6 MER0059034 dacC SDY_0841
SE S11 S11.008 penicillin-binding protein 5-type peptidase MER0059029 dacA SDY_0554
SE S11 unassigned family S11 unassigned peptidases MER0059059 dacD SDY_2233
SE S11 unassigned family S11 unassigned peptidases MER0950626 blaSHV
SE S11 unassigned family S11 unassigned peptidases MER0948197 CTX-M3
SE S11 unassigned family S11 unassigned peptidases MER0971934 blaTEM
SE S12 S12.006 class C beta-lactamase MER0059106 ampC SDY_4394
SE S12 S12.012 AmpH protein (Escherichia-type) MER0059026 yaiH SDY_0370
SE S12 S12.A03 EcHS_A2566 protein (Escherichia coli) MER0173075 yfeW SD1617_1305
SE S13 S13.001 D-Ala-D-Ala peptidase C MER0059086 dacB SDB_02888
SF S24 S24.001 repressor LexA MER0059107 lexA SDY_4531
SF S24 S24.002 phage lambda repressor protein MER0059054 SDY_1925
SF S24 S24.003 UmuD protein MER0059041 umuD SDY_1220
SF S24 S24.003 UmuD protein MER0401077 SD1617_0034
SF S24 unassigned family S24 unassigned peptidases MER1042413 Sd1012_1473/SD15574_1886
SF S24 unassigned family S24 unassigned peptidases MER1029714 SD15574_0855
SF S26 S26.001 signal peptidase I MER0028619 lepB SD1617_1079
SH S73 S73.001 gpO peptidase (Enterobacteria phage P2) MER0322547
SH S73 S73.001 gpO peptidase (Enterobacteria phage P2) MER0276383 SDB_00098
SH S73 S73.001 gpO peptidase (Enterobacteria phage P2) MER0151039 SD15574_2678
SH S78 unassigned family S78 unassigned peptidases MER1086562 Sd1012_2228/SD15574_0306
SJ S16 S16.001 Lon-A peptidase MER0059023 lon SDY_0293
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0059109 sms SDY_4650
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0510950
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0510951
SJ S16 unassigned family S16 unassigned peptidases MER0508717
SK S14 S14.001 peptidase Clp (type 1) MER0059024 clpP SDY_0295
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0359893 SD15574_5502
SK S41 S41.001 C-terminal processing peptidase-1 MER0138425
SK S41 S41.001 C-terminal processing peptidase-1 MER0059056 prc SDY_1978
SK S49 S49.003 protein C (bacteriophage lambda) MER0279188 SDB_00667
SK S49 unassigned subfamily S49A unassigned peptidases MER1338120
SK S49 unassigned subfamily S49B unassigned peptidases MER0059044 sppA SDY_1507
SK S49 unassigned subfamily S49B unassigned peptidases MER0059043 sohB SDY_1342
SK S49 unassigned subfamily S49B unassigned peptidases MER1353290
SS S66 S66.002 murein tetrapeptidase LD-carboxypeptidase (Escherichia-type) MER0059042 ldcA SDY_1232
ST S54 S54.016 GlpG peptidase (Escherichia-type) MER0059094 glpG SDY_3651
ST S54 non-peptidase homologue family S54 non-peptidase homologues MER1079261 SD15574_0953
ST S54 unassigned family S54 unassigned peptidases MER1076607 SD22575_0782/SDB_02769
U- U32 U32.002 collagenase (Helicobacter-type) MER0059060 yegQ SDY_2259
U- U32 U32.003 collagenase (Salmonella-type) MER0059050 ydcP SDY_1740
U- U32 U32.A01 YhbV protein (Escherichia coli) MER0059084 yhbV SDY_3338
U- U32 unassigned family U32 unassigned peptidases MER0059083 yhbU SDY_3337
U- U69 unassigned family U69 unassigned peptidases MER0508716
U- U69 unassigned family U69 unassigned peptidases MER0195485
U- U69 unassigned family U69 unassigned peptidases MER0195990

GENOME ANALYSIS: Comparison with 111 completely sequenced genomes from family Enterobacteriaceae
Family Comment
C118 significant presence (4 homologues)
C79 significant presence (3 homologues)
G4 significant presence (1 homologues)
S15 significant presence (1 homologues)
S45 significant presence (2 homologues)

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