Shigella sonnei

Taxonomy
Taxonomy database identifier: 624
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Enterobacteriales
Family Enterobacteriaceae
Genus Shigella
Species sonnei
Peptidase View peptidase sequences from Shigella sonnei
Count of known and putative peptidases: 143, non-peptidase homologues 31
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 A08.001 signal peptidase II MER0054833 lspA SSON_0032
AC A8 A08.001 signal peptidase II MER1149971
AC A8 A08.001 signal peptidase II MER1150279
AC A8 A08.001 signal peptidase II MER1150295
AC A8 A08.001 signal peptidase II MER1149973
AC A8 unassigned family A8 unassigned peptidases MER1155955 lspA_1
AD A24 unassigned subfamily A24A unassigned peptidases MER0691407 pilU
AD A24 unassigned subfamily A24A unassigned peptidases MER1157878
AD A24 unassigned family A24 unassigned peptidases MER0619554 pilU
AE A31 A31.001 HybD peptidase MER0057952 SS53G_1642
AE A31 A31.002 HyaD peptidase MER0057621 hyaD SSON_0981
AE A31 A31.003 HycI peptidase MER0054845 hycI SSON_2864
AF A26 A26.005 IcsP peptidase (Shigella flexneri) MER0101082 icsP/sopA SSON_P241
AF A26 unassigned family A26 unassigned peptidases MER1159471 ompP
AF A26 unassigned family A26 unassigned peptidases MER1159428 ompP
AF A26 unassigned family A26 unassigned peptidases MER1159364 ompP
AF A26 unassigned family A26 unassigned peptidases MER1159347
AF A26 unassigned family A26 unassigned peptidases MER1159348
AF A26 unassigned family A26 unassigned peptidases MER1159253
AF A26 unassigned family A26 unassigned peptidases MER1159357
AF A26 unassigned family A26 unassigned peptidases MER1159345
AF A26 unassigned family A26 unassigned peptidases MER1159459
AF A26 unassigned family A26 unassigned peptidases MER1159427
AF A26 unassigned family A26 unassigned peptidases MER1159468
C- C118 C118.UPW family C118 homologues, unassigned MER0750827
C- C118 C118.UPW family C118 homologues, unassigned MER0751464
C- C118 C118.UPW family C118 homologues, unassigned MER0750923 ospD2
C- C118 C118.UPW family C118 homologues, unassigned MER0751225
C- C118 C118.UPW family C118 homologues, unassigned MER0751421
C- C118 C118.UPW family C118 homologues, unassigned MER0752123
C- C118 C118.UPW family C118 homologues, unassigned MER0751354 ospD2_1
CE C79 unassigned family C79 unassigned peptidases MER0318803 elaD SSMOSELEY_2985
CE C79 unassigned family C79 unassigned peptidases MER0318799 SS53G_0889
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0461842 yafK SSON_0266
CL C82 C82.A02 ECBD_1659 protein (Escherichia coli) MER0461728 SS53G_1216
CL C82 C82.A03 YnhG protein (Escherichia coli) MER0463376 ynhG SSON_1478
CL C82 C82.A04 YbiS protein (Escherichia coli) MER0461843 ybiS SSON_0798
CL C82 C82.A05 YcfS protein (Escherichia coli) MER0463309 ycfS SSON53_06075
CO C40 C40.004 spr peptidase MER0057941 spr SSON_2231
CO C40 C40.A01 NlpC protein (Escherichia coli) MER0057623 nlpC SSON_1450
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0377912 SS322685_0664
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0057624 ydhO SSON_1501
CO C40 unassigned family C40 unassigned peptidases MER0057612 yafL SSON_0269
CO C40 unassigned family C40 unassigned peptidases MER0175659 SSON_2414
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0057136 pepN SSON_0935
MA M3 M03.004 oligopeptidase A MER0057167 prlC SSON_3733
MA M3 M03.004 oligopeptidase A MER1186735 prlC_2
MA M3 M03.005 peptidyl-dipeptidase Dcp MER0057144 dcp SSON_1590
MA M41 M41.001 FtsH peptidase MER0054848 hflB SSON_3326
MA M48 M48.002 HtpX peptidase MER0057140 htpX SSON_1332
MA M48 M48.022 low osmolarity induced peptidase MER0057162 yggG SSON_3090
MA M48 M48.023 BepA (Escherichia coli) MER0057157 SSON_2576
MA M48 M48.A03 YcaL protein (Escherichia coli) MER0057135 ycaL SSON_0911
MA M90 M90.001 MtfA peptidase MER0217726 SSON_2035
MC M14 M14.034 murein peptide amidase MpaA MER0468877 ycjI SSON_1812
MD M15 unassigned subfamily M15D unassigned peptidases MER0057145 ddpX SSON_1636
MD M74 M74.001 murein endopeptidase MER0057153 mepA SSON_2386
MD M74 M74.001 murein endopeptidase MER1263141 mepA
MD M74 unassigned family M74 unassigned peptidases MER1262359 mepA
ME M16 M16.001 pitrilysin MER0054846 ptr SSON_2978
ME M16 M16.001 pitrilysin MER0609710 ptrA
ME M16 M16.A05 PqqL protein (Escherichi coli) MER0054841 pqqL SSON_1630
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0057169 yhjJ SSON_3864
ME M16 unassigned subfamily M16A unassigned peptidases MER0600785 ptrA_1
ME M16 unassigned subfamily M16A unassigned peptidases MER0627197
ME M16 unassigned subfamily M16A unassigned peptidases MER0629212 ptrA
MF M17 M17.003 PepA aminopeptidase MER0057173 pepA SSON_4445
MF M17 M17.004 PepB aminopeptidase MER0054842 pepB SSON_2605
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0057610 map SSON_0180
MG M24 M24.003 Xaa-Pro dipeptidase (bacteria-type) MER0057966 pepQ SSON_4020
MG M24 M24.004 aminopeptidase P (bacteria) MER1002363 pepP
MG M24 M24.004 aminopeptidase P (bacteria) MER0057951 pepP SS53G_1765
MG M24 unassigned subfamily M24A unassigned peptidases MER0367964 map
MG M24 unassigned subfamily M24B unassigned peptidases MER0484424 pepP
MH M20 M20.003 peptidase T MER0054838 pepT SSON_1145
MH M20 M20.007 Xaa-His dipeptidase MER0057133 pepD SSON_0279
MH M20 M20.007 Xaa-His dipeptidase MER0475871 pepD
MH M20 M20.007 Xaa-His dipeptidase MER0854379
MH M20 M20.010 DapE peptidase MER0057156 dapE SSON_2552
MH M20 M20.020 p-aminobenzoyl-glutamate hydrolase subunit A MER0057147 iaaH/ydaJ SSON_1793
MH M20 M20.974 acetylornithine deacetylase ArgE MER0057171 argE SSON_4130
MH M20 M20.A08 YgeY protein (Escherichia coli) MER0057161 ygeY SSON_3023
MH M20 unassigned subfamily M20C unassigned peptidases MER0479065 pepD
MH M20 unassigned family M20D unassigned peptidases MER0057148 SSON_1794
MH M28 M28.005 IAP aminopeptidase MER0057159 iap SSON_2901
MH M28 M28.005 IAP aminopeptidase MER1246246 iap_2
MH M28 unassigned subfamily M28C unassigned peptidases MER1246292
MH M28 unassigned subfamily M28C unassigned peptidases MER1246103 iap
MH M42 M42.008 YpdE-type putative peptidase MER0057155 SSON_2476
MH M42 unassigned family M42 unassigned peptidases MER0057170 frvX SSON_4068
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0057618 nagA SSON_0631
MM M50 M50.004 RseP peptidase MER0057132 yaeL SSON_0188
MO M23 M23.011 YebA peptidase MER0057139 yebA SSON_1285
MO M23 M23.011 YebA peptidase MER0387397 SS322685_1886
MO M23 M23.950 YibP g.p. (Escherichia sp.) MER0057168 yibP SSON_3792
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0057158 nlpD SSON_2890
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0057160 SSON_3016
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0479634 SS53G_1812
MP M67 unassigned subfamily M67B unassigned peptidases MER0906914 SSMOSELEY_2489
MP M67 unassigned subfamily M67B unassigned peptidases MER0057945 SSON_2414
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0057957 tldD SSON_3386
MU M103 M103.950 microcin-processing peptidase 1 homologue MER0057969 pmbA SSON_4416
NB N6 N06.002 SpaS protein (Salmonella sp.) MER0327009
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405799 flhB SSON_1240
ND N4 N04.002 EspP gamma protein autotransporter domain (Escherichi-type) MER0200630 espP/sigA SSON_3223
PA S1 S01.260 B1598 peptidase MER0057625 SSON_1562
PA S1 S01.273 DegP peptidase MER0005950 degP/htrA SS482266_0164
PA S1 S01.274 DegQ peptidase MER0057956 SS53G_4658
PA S1 S01.275 DegS peptidase MER0054279 degS SSON_3376
PA S1 unassigned subfamily S1C unassigned peptidases MER1270633 degQ
PA S1 unassigned subfamily S1C unassigned peptidases MER1270126 degP
PA S1 unassigned subfamily S1C unassigned peptidases MER1272315
PA S6 S06.005 Pic peptidase MER0294563 pic SSMOSELEY_3729
PA S6 S06.010 EspC peptidase MER0054847 espP/sigA SSON_3223
PA S6 non-peptidase homologue family S6 non-peptidase homologues MER1280496
PA S6 unassigned family S6 unassigned peptidases MER1276207 sepA
PA S6 unassigned family S6 unassigned peptidases MER1280674 pet
PA S6 unassigned family S6 unassigned peptidases MER1280461 espC
PA S6 unassigned family S6 unassigned peptidases MER1280578 pet
PA S6 unassigned family S6 unassigned peptidases MER1280848 pet
PA S6 unassigned family S6 unassigned peptidases MER1280651 sat
PA S6 unassigned family S6 unassigned peptidases MER1280839 pic
PA S6 unassigned family S6 unassigned peptidases MER1280814 sat_1
PA S6 unassigned family S6 unassigned peptidases MER1280686 pic
PA S6 unassigned family S6 unassigned peptidases MER1280512 sat_1
PA S6 unassigned family S6 unassigned peptidases MER1280789 pet
PA S6 unassigned family S6 unassigned peptidases MER1280471 espC/espP
PA S6 unassigned family S6 unassigned peptidases MER1280898 pic_1
PA S6 unassigned family S6 unassigned peptidases MER1280574 pic
PA S6 unassigned family S6 unassigned peptidases MER1280776 sat
PA S6 unassigned family S6 unassigned peptidases MER1280477
PA S6 unassigned family S6 unassigned peptidases MER1280481
PA S6 unassigned family S6 unassigned peptidases MER1274674
PA S6 unassigned family S6 unassigned peptidases MER1280503
PA S6 unassigned family S6 unassigned peptidases MER0294553
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0057944 purF SSON_2370
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0057955 gltB SSON_3360
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0057617 asnB SSON_0627
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0057963 glmS SSON_3890
PB C44 unassigned family C44 unassigned peptidases MER0057611 yafJ SSON_0265
PB S45 S45.001 penicillin G acylase precursor MER0057970 SSON_4482
PB S45 S45.001 penicillin G acylase precursor MER0057971 SSON_4484
PB T1 T01.006 HslV component of HslUV peptidase MER0054280 hslV SSON_4101
PB T2 unassigned family T2 unassigned peptidases MER0057620 ybiK SSON_0810
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0057962 ggt SS53G_4895
PC C26 C26.954 carA protein MER0057609 carA SSON_0037
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0057959 pabA SSON_3491
PC C26 C26.957 GMP synthase MER0057947 guaA SSON_2589
PC C26 C26.960 TrpD protein (anthranilate synthase component II) MER0057939 trpD SSON_1880
PC C26 C26.961 PuuD protein MER0057938 puuD SSON_1842
PC C26 C26.964 CTP synthetase MER0448742 pyrG SSON_2937
PC C56 C56.001 PfpI peptidase MER0057954 SS53G_4572
PC C56 C56.006 Hsp31 peptidase MER0057940 hchA SSON_2023
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0057614 thiJ SSON_0401
PC S51 S51.001 dipeptidase E MER0054849 pepE SSON_4192
PC S51 unassigned family S51 unassigned peptidases MER1356938 pepE_1
SC S9 S09.010 oligopeptidase B MER0054839 ptrB SSON_1303
SC S9 S09.A36 YfhR protein (Escherichi coli) MER0057949 SSON_2616
SC S9 S09.A46 YjfP protein (Escherichi coli) MER0057968 yjfP SSON_4372
SC S9 S09.A47 aes protein (acetyl esterase) (Escherichi coli) MER0057615 aes SSON_0463
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER0997966 SSMOSELEY_2841
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0210901 fes SSON_0535
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0057937 SSON_1806
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0057953 yghYX SSON_3144
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0057965 ysgA SSON_4005
SC S9 unassigned subfamily S9B unassigned peptidases MER1000998 SSMOSELEY_0542
SC S9 unassigned family S9 unassigned peptidases MER0479462 EG356c_098 EG356c_098
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1023777 SSMOSELEY_2379/SSON_1807
SC S33 S33.A46 YheT protein (Escherichia coli) MER0057958 yheT SSON_3484
SC S33 S33.A54 YnbC protein (Escherichia coli) MER0057627 SSON_1736
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0057622 rutD SSON_1027
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0057964 pldB SSON_3999
SC S33 unassigned family S33 unassigned peptidases MER0035543 estX
SC S33 unassigned family S33 unassigned peptidases MER0057619 ybfF SSON_0640
SC S33 unassigned family S33 unassigned peptidases MER0057943 menH SSON_2324
SC S33 unassigned family S33 unassigned peptidases MER0057960 bioH SSON_3545
SE S11 S11.002 murein-DD-endopeptidase MER0057152 pbpG SSON_2191
SE S11 S11.003 penicillin-binding protein 6 MER0352399 dacC SS482266_0954
SE S11 S11.008 penicillin-binding protein 5-type peptidase MER0057134 dacA SSON_0586
SE S11 unassigned family S11 unassigned peptidases MER0949170 blaCTX-M-64
SE S11 unassigned family S11 unassigned peptidases MER0057150 dacD SSON_2080
SE S11 unassigned family S11 unassigned peptidases MER0948569 blaTEM
SE S11 unassigned family S11 unassigned peptidases MER0948251 blaCTX-M-15
SE S11 unassigned family S11 unassigned peptidases MER0968831 blaSHV/blaSHV-12
SE S11 unassigned family S11 unassigned peptidases MER0948789 blaCTX-M-79
SE S11 unassigned family S11 unassigned peptidases MER0948893 IX87_15740
SE S12 S12.006 class C beta-lactamase MER0057967 ampC SSON_4336
SE S12 S12.012 AmpH protein (Escherichia-type) MER0057613 yaiH SSON_0351
SE S12 S12.A03 EcHS_A2566 protein (Escherichia coli) MER0057946 yfeW SSON_2519
SE S13 S13.001 D-Ala-D-Ala peptidase C MER0057166 SS53G_4607
SE S13 unassigned family S13 unassigned peptidases MER1311830 dacB/dacB_2
SE S13 unassigned family S13 unassigned peptidases MER1314304 dacB_2
SE S13 unassigned family S13 unassigned peptidases MER1314226 dacB
SE S13 unassigned family S13 unassigned peptidases MER1314353
SE S13 unassigned family S13 unassigned peptidases MER1314308
SF S24 S24.001 repressor LexA MER0057172 lexA SSON_4223
SF S24 S24.003 UmuD protein MER0057137 umuD SSON_1174
SF S24 unassigned family S24 unassigned peptidases MER1314014
SF S26 S26.001 signal peptidase I MER0052858 lepB SSON_2692
SF S26 unassigned subfamily S26A unassigned peptidases MER1335569 lepB
SF S26 unassigned subfamily S26A unassigned peptidases MER1332843 lepB
SF S26 unassigned subfamily S26A unassigned peptidases MER1334807
SF S26 unassigned subfamily S26A unassigned peptidases MER1332546 lepB
SF S26 unassigned subfamily S26A unassigned peptidases MER1333061
SH S73 S73.001 gpO peptidase (Enterobacteria phage P2) MER0154689 SSMOSELEY_5066
SH S73 S73.001 gpO peptidase (Enterobacteria phage P2) MER0322632 SS53G_0486
SH S78 unassigned family S78 unassigned peptidases MER1087697 SSMOSELEY_1785
SH S78 unassigned family S78 unassigned peptidases MER0054844 SSON_2723
SJ S16 S16.001 Lon-A peptidase MER0054835 lon SSON_0422
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0054850 sms SSON_4539
SJ S16 S16.A10 ycbZ (Escherichia coli) MER0054837 SSON_0959
SJ S16 unassigned family S16 unassigned peptidases MER1323874 lon
SJ S16 unassigned family S16 unassigned peptidases MER1308806
SJ S16 unassigned family S16 unassigned peptidases MER1011902
SJ S16 unassigned family S16 unassigned peptidases MER1324033 lon
SK S14 S14.001 peptidase Clp (type 1) MER0054834 clpP SSON_0420
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0054836 SSON_0877
SK S14 unassigned family S14 unassigned peptidases MER1311821
SK S41 S41.001 C-terminal processing peptidase-1 MER0054840 prc SSON_1331
SK S41 unassigned subfamily S41A unassigned peptidases MER1344908 prc
SK S41 unassigned subfamily S41A unassigned peptidases MER1345517 prc
SK S41 unassigned subfamily S41A unassigned peptidases MER1338115 prc
SK S41 unassigned subfamily S41A unassigned peptidases MER1345003
SK S41 unassigned subfamily S41A unassigned peptidases MER1336199 prc
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER0057149 sohB SSON_1871
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER1068879 SSON_0877
SK S49 non-peptidase homologue subfamily S49B non-peptidase homologues MER1354083
SK S49 unassigned subfamily S49A unassigned peptidases MER1348833 sppA
SK S49 unassigned subfamily S49A unassigned peptidases MER1351241 sppA_2
SK S49 unassigned subfamily S49A unassigned peptidases MER1352019 sppA
SK S49 unassigned subfamily S49A unassigned peptidases MER1337580 sppA/sppA_1
SK S49 unassigned subfamily S49A unassigned peptidases MER1348607
SK S49 unassigned subfamily S49A unassigned peptidases MER1345047
SK S49 unassigned subfamily S49A unassigned peptidases MER1344743 sppA
SK S49 unassigned subfamily S49A unassigned peptidases MER1348791
SK S49 unassigned subfamily S49B unassigned peptidases MER1352873 sohB_1
SK S49 unassigned subfamily S49B unassigned peptidases MER1352770 sohB_1
SK S49 unassigned subfamily S49B unassigned peptidases MER1346466
SK S49 unassigned subfamily S49B unassigned peptidases MER1342525
SK S49 unassigned subfamily S49B unassigned peptidases MER0057142 sppA SSON_1389
SK S49 unassigned subfamily S49B unassigned peptidases MER1353478
SK S49 unassigned subfamily S49B unassigned peptidases MER1354038
SK S49 unassigned subfamily S49B unassigned peptidases MER1345157
SK S49 unassigned subfamily S49B unassigned peptidases MER1353297
SK S49 unassigned subfamily S49B unassigned peptidases MER1354445
SK S49 unassigned subfamily S49B unassigned peptidases MER1353623
SK S49 unassigned subfamily S49B unassigned peptidases MER1342780
SK S49 unassigned subfamily S49B unassigned peptidases MER1352648
SK S49 unassigned subfamily S49B unassigned peptidases MER1352632
SK S49 unassigned subfamily S49B unassigned peptidases MER1353283
SK S49 unassigned subfamily S49B unassigned peptidases MER1352712
SK S49 unassigned subfamily S49B unassigned peptidases MER1344882
SK S49 unassigned subfamily S49B unassigned peptidases MER1354185
SK S49 unassigned subfamily S49B unassigned peptidases MER1352955 sohB_2/sohB_3
SK S49 unassigned subfamily S49B unassigned peptidases MER1354577
SK S49 unassigned subfamily S49B unassigned peptidases MER1348427
SK S49 unassigned subfamily S49B unassigned peptidases MER1352828 sohB_1/sohB_2/sohB_3
SK S49 unassigned subfamily S49C unassigned peptidases MER0057154 SSON_2427
SS S66 S66.002 murein tetrapeptidase LD-carboxypeptidase (Escherichia-type) MER0057138 SSON_1185
ST S54 S54.016 GlpG peptidase (Escherichia-type) MER0057961 glpG SSON_3661
ST S54 S54.030 GlpG g.p. (Shigella sonnei) MER0057616 rhom7 SSON_0610
U- U32 U32.002 collagenase (Helicobacter-type) MER0057151 yegQ SSON_2134
U- U32 U32.003 collagenase (Salmonella-type) MER0057146 ydcP SSON_1703
U- U32 U32.A01 YhbV protein (Escherichia coli) MER0057165 yhbV SSON_3305
U- U32 unassigned family U32 unassigned peptidases MER0057164 yhbU SSON_3304
U- U69 unassigned family U69 unassigned peptidases MER0195486 icsA SSON_P143

GENOME ANALYSIS: Comparison with 111 completely sequenced genomes from family Enterobacteriaceae
Family Comment
C118 significant presence (7 homologues)
C79 significant presence (2 homologues)
S15 significant presence (1 homologues)
S45 significant presence (2 homologues)