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MEROPS SUBMISSIONS

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information

Methylomicrobium alcaliphilum

Taxonomy
Taxonomy database identifier: 271065
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Methylococcales
Family Methylococcaceae
Genus Methylomicrobium
Species alcaliphilum
Peptidase View peptidase sequences from Methylomicrobium alcaliphilum
Count of known and putative peptidases: 78, non-peptidase homologues 27
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 unassigned family A32 unassigned peptidases MER0235519 MEALZ_0213
AC A8 unassigned family A8 unassigned peptidases MER0281510 lspA MEALZ_3582
AD A24 A24.001 type 4 prepilin peptidase 1 MER0281928 pilD MEALZ_0680
AD A24 unassigned subfamily A24A unassigned peptidases MER0687753 MEALZ_3183
AE A31 A31.004 hoxW peptidase MER0281951 MEALZ_2461
AE A31 unassigned family A31 unassigned peptidases MER0427632 MEALZ_3724
CA C70 C70.001 AvrRpt2 peptidase MER0281065 MEALZ_1939
CA C93 unassigned family C93 unassigned peptidases MER0392810 MEALZ_3689
CD C14 unassigned subfamily C14B unassigned peptidases MER0281505 MEALZ_0026
CD C14 unassigned subfamily C14B unassigned peptidases MER0281515 MEALZ_0036
CD C14 unassigned subfamily C14B unassigned peptidases MER0281286 MEALZ_1397
CD C14 unassigned subfamily C14B unassigned peptidases MER0281316 MEALZ_1412
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0281352 pcp MEALZ_4017
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0461641 MEALZ_1214
CL C82 unassigned subfamily C82A unassigned peptidases MER0461642 MEALZ_1224
CL C82 unassigned subfamily C82A unassigned peptidases MER0461643 MEALZ_1353
CL C82 unassigned subfamily C82A unassigned peptidases MER0461644 MEALZ_1922
CO C40 C40.004 spr peptidase MER0280805 MEALZ_1666
G- G5 unassigned family G5 unassigned peptidases MER0912606 MEALZ_0053
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0362515 MEALZ_3535
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0281804 pepN MEALZ_3875
MA M3 M03.004 oligopeptidase A MER0281712 prlC MEALZ_2048
MA M41 M41.001 FtsH peptidase MER0281091 ftsH MEALZ_1809
MA M41 M41.001 FtsH peptidase MER0281327 ftsH MEALZ_4005
MA M41 M41.021 FtsH peptidase (Thermotoga-type) MER0281596 ftsH MEALZ_3622
MA M41 unassigned family M41 unassigned peptidases MER0281735 MEALZ_2063
MA M48 M48.002 HtpX peptidase MER0281691 htpX MEALZ_1893
MA M48 unassigned subfamily M48A unassigned peptidases MER0281554 MEALZ_1019
MA M48 unassigned subfamily M48B unassigned peptidases MER0281375 MEALZ_2399
MA M48 unassigned subfamily M48C unassigned peptidases MER0281744 MEALZ_1261
MA M48 unassigned subfamily M48C unassigned peptidases MER0281371 MEALZ_3211
MA M48 unassigned family M48 unassigned peptidases MER0281307 MEALZ_1403
MA M72 unassigned family M72 unassigned peptidases MER0281024 MEALZ_0963
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0281619 MEALZ_0238
MD M15 unassigned subfamily M15D unassigned peptidases MER0281040 MEALZ_1780
MD M74 unassigned family M74 unassigned peptidases MER0281089 mepA MEALZ_0175
ME M16 M16.019 YMXG peptidase MER0281971 MEALZ_3141
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0281969 MEALZ_3140
ME M16 unassigned subfamily M16B unassigned peptidases MER0281968 MEALZ_3140
MF M17 unassigned family M17 unassigned peptidases MER0281915 pepA MEALZ_0675
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0281161 map MEALZ_2963
MG M24 M24.004 aminopeptidase P (bacteria) MER0280795 pepP MEALZ_3297
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0281273 MEALZ_3978
MH M18 unassigned family M18 unassigned peptidases MER0289888 apeB MEALZ_2660
MH M20 unassigned subfamily M20A unassigned peptidases MER0281727 dapE MEALZ_1255
MH M20 unassigned family M20D unassigned peptidases MER0371895 MEALZ_3561
MH M20 unassigned family M20D unassigned peptidases MER0372661 hipO MEALZ_3976
MH M28 unassigned subfamily M28F unassigned peptidases MER0259416 MEALZ_3857
MJ M38 M38.982 urease MER0281021 ureC MEALZ_1772
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0281936 mtaD MEALZ_1497
MM M50 non-peptidase homologue subfamily M50B non-peptidase homologues MER0898133 MEALZ_3196
MM M50 unassigned subfamily M50B unassigned peptidases MER0894469 MEALZ_2955
MO M23 M23.009 Mername-AA292 peptidase MER0281231 MEALZ_0553
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0281725 MEALZ_0438
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0281713 MEALZ_1243
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0281379 MEALZ_1588
MP M67 unassigned subfamily M67B unassigned peptidases MER0281403 MEALZ_3376
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0280878 tldD MEALZ_3477
MU M103 M103.950 microcin-processing peptidase 1 homologue MER0280877 pmbA MEALZ_3476
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0281269 flhB MEALZ_3163
PA S1 unassigned subfamily S1C unassigned peptidases MER0281259 mucD MEALZ_0576
PA S1 unassigned subfamily S1C unassigned peptidases MER0281443 MEALZ_0820
PA S1 unassigned subfamily S1C unassigned peptidases MER0281848 degP MEALZ_1450
PA S1 unassigned subfamily S1C unassigned peptidases MER0281615 MEALZ_1858
PA S1 unassigned subfamily S1C unassigned peptidases MER0281837 MEALZ_2110
PA S1 unassigned subfamily S1C unassigned peptidases MER0281063 MEALZ_2760
PA S1 unassigned subfamily S1C unassigned peptidases MER0281807 degQ MEALZ_3878
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0281926 purF MEALZ_1489
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0281108 glmS MEALZ_0338
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0458438 MEALZ_1901
PB C44 unassigned family C44 unassigned peptidases MER0281164 glt MEALZ_2968
PB S45 S45.003 cephalosporin C acylase precursor MER0281298 MEALZ_1538
PB S45 S45.003 cephalosporin C acylase precursor MER0281426 MEALZ_2431
PB T1 T01.007 CodW component of CodWX peptidase MER0323582 hslV MEALZ_3543
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0281760 ggt MEALZ_2903
PB T3 T03.013 gamma-glutamyltransferase (Synechocystis-type) MER0281719 ggt MEALZ_2051
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0281028 trpG MEALZ_0150
PC C26 C26.957 GMP synthase MER0280949 guaA MEALZ_0102
PC C26 C26.964 CTP synthetase MER0448218 pyrG MEALZ_1460
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0444021 hisH MEALZ_0074
PC C26 unassigned family C26 unassigned peptidases MER0281088 carA MEALZ_1804
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0281027 purL MEALZ_1778
PE T5 T05.001 ornithine acetyltransferase precursor MER0281772 argJ MEALZ_0461
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0989523 MEALZ_p0091
SB S8 non-peptidase homologue family S8 non-peptidase homologues MER0281814 MEALZ_0480
SB S8 unassigned subfamily S8A unassigned peptidases MER0980151 MEALZ_2265
SB S8 unassigned subfamily S8A unassigned peptidases MER0281162 MEALZ_2820
SC S9 unassigned family S9 unassigned peptidases MER0281770 MEALZ_0455
SC S33 S33.001 prolyl aminopeptidase MER0281305 pip MEALZ_0590
SC S33 unassigned family S33 unassigned peptidases MER0280928 MEALZ_1727
SC S33 unassigned family S33 unassigned peptidases MER0281973 bioH MEALZ_2319
SC S33 unassigned family S33 unassigned peptidases MER0280905 cpo MEALZ_2527
SC S33 unassigned family S33 unassigned peptidases MER0281808 ABHD MEALZ_3065
SE S11 S11.007 penicillin-binding protein 4 (Neisseria-type) peptidase MER0281038 MEALZ_1921
SE S11 unassigned family S11 unassigned peptidases MER0281418 MEALZ_3389
SE S12 S12.950 esterase EstB MER0280865 estB MEALZ_2651
SE S13 S13.003 D-Ala-D-Ala carboxypeptidase PBP3 MER1029095 MEALZ_1215
SF S24 S24.001 repressor LexA MER0281676 lexA MEALZ_1078
SF S24 S24.001 repressor LexA MER0281473 lexA MEALZ_3562
SF S24 S24.003 UmuD protein MER0281669 umuD MEALZ_1072
SF S24 S24.003 UmuD protein MER0281673 umuD MEALZ_1077
SF S26 S26.001 signal peptidase I MER0281257 MEALZ_0574
SF S26 S26.014 TraF peptidase MER0269049
SJ S16 S16.001 Lon-A peptidase MER0281318 lon MEALZ_3047
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0281909 radA MEALZ_3111
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0281042 comM MEALZ_0306
SJ S16 unassigned family S16 unassigned peptidases MER0281923 MEALZ_2447
SJ S16 unassigned family S16 unassigned peptidases MER0281134 MEALZ_3752
SK S14 S14.001 peptidase Clp (type 1) MER0281779 clpP MEALZ_3049
SK S41 S41.004 C-terminal processing peptidase-3 MER0281728 MEALZ_0439
SK S49 unassigned subfamily S49B unassigned peptidases MER0321403 MEALZ_3114
SK S49 unassigned subfamily S49C unassigned peptidases MER1072015 MEALZ_0245
SK S49 unassigned subfamily S49C unassigned peptidases MER1072562 MEALZ_2777
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0281890 MEALZ_1477
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0280959 MEALZ_3659
U- U32 U32.002 collagenase (Helicobacter-type) MER0281672 yegQ MEALZ_0407

GENOME ANALYSIS: Comparison with 841 completely sequenced genomes from class Gammaproteobacteria
Family Comment
A32 significant presence (1 homologues)
C14 significant presence (4 homologues)
C15 significant presence (1 homologues)
C70 significant presence (1 homologues)
C93 significant presence (1 homologues)
G4 significant presence (1 homologues)
M18 significant presence (1 homologues)
M67 significant presence (1 homologues)
M72 significant presence (1 homologues)
T5 significant presence (1 homologues)

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