Sphingomonas wittichii

Taxonomy
Taxonomy database identifier: 160791
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Rhodospirillales
Family Sphingomonadaceae
Genus Sphingomonas
Species wittichii
Peptidase View peptidase sequences from Sphingomonas wittichii
Count of known and putative peptidases: 160, non-peptidase homologues 81
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER1155742
AC A8 unassigned family A8 unassigned peptidases MER0087446 lspA Swit_3783
AD A24 unassigned subfamily A24A unassigned peptidases MER0087465 Swit_1113
AD A24 unassigned subfamily A24A unassigned peptidases MER0087389 Swit_3500
AD A24 unassigned subfamily A24B unassigned peptidases MER0058041 Swit_4870
CA C1 unassigned family C1 unassigned peptidases MER0087454 Swit_4065
CD C14 unassigned subfamily C14B unassigned peptidases MER0087405 Swit_0798
CD C14 unassigned subfamily C14B unassigned peptidases MER0087470 Swit_1383
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0094068 Swit_0885
CL C82 C82.003 ykuD transpeptidase MER0076743 Swit_3803 Swit_3803
CL C82 unassigned subfamily C82A unassigned peptidases MER0126807 Swit_3470
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0094138 Swit_0096
CO C40 unassigned family C40 unassigned peptidases MER1170518
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0346164 Swit_4856
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0087413 Swit_2754
MA M1 unassigned family M1 unassigned peptidases MER0087467 Swit_1156
MA M2 unassigned family M2 unassigned peptidases MER0059136 Swit_2667
MA M3 unassigned subfamily M3B unassigned peptidases MER1190249
MA M10 unassigned subfamily M10B unassigned peptidases MER0087433 Swit_0627
MA M13 unassigned family M13 unassigned peptidases MER1225133
MA M13 unassigned family M13 unassigned peptidases MER0059771 Swit_0514
MA M41 M41.001 FtsH peptidase MER0058107 ftsH Swit_4509
MA M48 unassigned subfamily M48B unassigned peptidases MER0087475 htpX Swit_1939
MA M48 unassigned subfamily M48B unassigned peptidases MER0087476 Swit_2119
MA M48 unassigned subfamily M48C unassigned peptidases MER0087431 Swit_0617
MA M48 unassigned subfamily M48C unassigned peptidases MER0087414 Swit_2756
MA M48 unassigned subfamily M48C unassigned peptidases MER0087449 Swit_3849
MA M48 unassigned subfamily M48C unassigned peptidases MER0087397 Swit_4654
MA M61 unassigned family M61 unassigned peptidases MER0087441 Swit_0105
MA M61 unassigned family M61 unassigned peptidases MER0087436 Swit_4782
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0059704 Swit_0915
MC M14 unassigned subfamily M14D unassigned peptidases MER0087392 Swit_3113
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0059123 Swit_3129
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0087394 Swit_3129
ME M16 unassigned subfamily M16B unassigned peptidases MER0059529 Swit_1414
ME M16 unassigned subfamily M16B unassigned peptidases MER0842388
ME M16 unassigned subfamily M16B unassigned peptidases MER0799357
MF M17 unassigned family M17 unassigned peptidases MER0087440 Swit_0098
MF M17 unassigned family M17 unassigned peptidases MER0087425 pepA Swit_0412
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0087472 Swit_1644
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0087437 Swit_4833
MG M24 M24.009 aminopeptidase P1 MER0087462 Swit_1086
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0087459 Swit_1058
MG M24 unassigned subfamily M24B unassigned peptidases MER0087457 Swit_4409
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0091976 Swit_1049
MH M20 non-peptidase homologue subfamily M20F non-peptidase homologues MER0087406 Swit_0916
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0844289 Swit_4117
MH M20 unassigned subfamily M20A unassigned peptidases MER1230740
MH M20 unassigned subfamily M20A unassigned peptidases MER0087443 Swit_0141
MH M20 unassigned subfamily M20A unassigned peptidases MER0087429 Swit_0530
MH M20 unassigned subfamily M20A unassigned peptidases MER0059027 dapE Swit_3620
MH M20 unassigned subfamily M20A unassigned peptidases MER0091978 Swit_4317
MH M20 unassigned family M20D unassigned peptidases MER0091980 Swit_3041
MH M20 unassigned family M20D unassigned peptidases MER0091979 Swit_3434
MH M20 unassigned family M20D unassigned peptidases MER0091977 Swit_4303
MH M20 unassigned family M20 unassigned peptidases MER0087435 Swit_4723
MH M28 unassigned subfamily M28D unassigned peptidases MER0087444 Swit_0237
MH M28 unassigned subfamily M28E unassigned peptidases MER0087439 Swit_0029
MH M28 unassigned subfamily M28E unassigned peptidases MER1249804
MH M28 unassigned subfamily M28E unassigned peptidases MER1051290
MH M28 unassigned subfamily M28E unassigned peptidases MER0087473 Swit_1824
MH M28 unassigned subfamily M28E unassigned peptidases MER0087412 Swit_2578
MH M28 unassigned family M28 unassigned peptidases MER0087399 Swit_3003
MH M28 unassigned family M28 unassigned peptidases MER0087452 Swit_3936
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0087407 Swit_0917
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0087415 Swit_2882
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0087402 Swit_3582
MJ M19 unassigned family M19 unassigned peptidases MER1202693
MJ M38 M38.977 dihydropyrimidinase related protein-4 MER0870841 Swit_2091
MJ M38 M38.978 dihydropyrimidinase related protein-5 MER0059781 Swit_0080
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0860783 Swit_0356
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0859846 Swit_3345
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059783 Swit_0079
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059778 Swit_0275
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059768 Swit_0603
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059762 Swit_0817
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059638 Swit_1105
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059193 Swit_1774
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059165 Swit_1775
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059147 Swit_2115
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059134 Swit_2737
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059130 Swit_2881
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059129 Swit_2922
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0058230 Swit_4208
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0058115 Swit_4304
MJ M38 unassigned family M38 unassigned peptidases MER0059770 Swit_0533
MJ M38 unassigned family M38 unassigned peptidases MER0059764 Swit_0681
MJ M38 unassigned family M38 unassigned peptidases MER0059708 Swit_0913
MJ M38 unassigned family M38 unassigned peptidases MER0059347 Swit_1717
MJ M38 unassigned family M38 unassigned peptidases MER0059157 Swit_1867
MJ M38 unassigned family M38 unassigned peptidases MER0059154 Swit_1966
MJ M38 unassigned family M38 unassigned peptidases MER0059143 Swit_2224
MJ M38 unassigned family M38 unassigned peptidases MER0058460 Swit_4081
MJ M38 unassigned family M38 unassigned peptidases MER0058234 Swit_4194
MJ M38 unassigned family M38 unassigned peptidases MER0058099 hutI Swit_4633
MM M50 unassigned family M50 unassigned peptidases MER0059772 Swit_0467
MO M23 M23.009 Mername-AA292 peptidase MER0087390 Swit_3541
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0087434 Swit_0639
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0087410 Swit_2546
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0087453 Swit_4002
MO M23 unassigned subfamily M23B unassigned peptidases MER0087393 Swit_3146
MO M23 unassigned subfamily M23B unassigned peptidases MER0087447 Swit_3804
MO M23 unassigned subfamily M23B unassigned peptidases MER0087451 Swit_3913
MP M67 unassigned subfamily M67B unassigned peptidases MER0059786 Swit_0062
MT M81 unassigned family M81 unassigned peptidases MER0223143 Swit_1428
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0087474 Swit_1921
MU M103 M103.UNW family M103 non-peptidase homologues MER0087417 Swit_2361
PA S1 unassigned subfamily S1C unassigned peptidases MER0087403 Swit_5274 Swit_5274
PA S1 unassigned subfamily S1C unassigned peptidases MER0087416 Swit_2354
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0059769 Swit_0578
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0059779 Swit_0265
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0059765 Swit_0657
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0058463 Swit_4039
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0058105 Swit_4548
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0058103 Swit_4553
PB S45 S45.001 penicillin G acylase precursor MER0059680 Swit_0920
PB T1 T01.006 HslV component of HslUV peptidase MER0087456 hslV Swit_4376
PB T1 unassigned family T1 unassigned peptidases MER0087477 Swit_1405
PB T2 unassigned family T2 unassigned peptidases MER0059146 Swit_2127
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0091334 Swit_1433
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0091335 Swit_4426
PB T3 unassigned family T3 unassigned peptidases MER0091328 Swit_2655
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0059118 Swit_3227
PC C26 C26.957 GMP synthase MER0059532 guaA Swit_1321
PC C26 C26.964 CTP synthetase MER0059141 pyrG Swit_2348
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0059135 Swit_2718
PC C26 unassigned family C26 unassigned peptidases MER0442496 carA Swit_0435
PC C26 unassigned family C26 unassigned peptidases MER0059571 Swit_1238
PC C26 unassigned family C26 unassigned peptidases MER0059124 Swit_3102
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0059775 Swit_0425
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0059142 Swit_2247
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0059138 Swit_2524
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0058095 Swit_4681
PE T5 T05.001 ornithine acetyltransferase precursor MER0091329 argJ Swit_2685
SB S8 unassigned subfamily S8A unassigned peptidases MER0058997 Swit_3670
SB S8 unassigned subfamily S8A unassigned peptidases MER0087448 Swit_3835
SC S9 S09.010 oligopeptidase B MER0087471 Swit_1423
SC S9 S09.012 dipeptidyl-peptidase 5 MER0087463 Swit_1094
SC S9 S09.023 D230019K24Rik peptidase (Mus musculus) MER0059132 Swit_2757
SC S9 S09.940 S-formylglutathione hydrolase FrmB (Escherichi coli) MER0059580 Swit_1177
SC S9 S09.962 BC026374 protein (Mus musculus) MER0059599 Swit_1170
SC S9 S09.A77 dpf-6 g.p. (Caenorhabditis elegans) MER0087438 Swit_0027
SC S9 S09.A77 dpf-6 g.p. (Caenorhabditis elegans) MER0087464 Swit_1112
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0059761 Swit_0846
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0059488 Swit_1497
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0059150 Swit_2080
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0059131 Swit_2842
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0059122 Swit_3134
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0058384 Swit_4133
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0058263 Swit_4157
SC S9 unassigned subfamily S9A unassigned peptidases MER1294531
SC S9 unassigned subfamily S9A unassigned peptidases MER0087468 Swit_1324
SC S9 unassigned subfamily S9C unassigned peptidases MER1304763
SC S9 unassigned subfamily S9C unassigned peptidases MER1301451
SC S9 unassigned subfamily S9C unassigned peptidases MER1114519
SC S9 unassigned subfamily S9C unassigned peptidases MER1301633
SC S9 unassigned subfamily S9C unassigned peptidases MER0059634 Swit_1117
SC S9 unassigned subfamily S9C unassigned peptidases MER0087401 Swit_3040
SC S9 unassigned subfamily S9D unassigned peptidases MER0058090 Swit_4730
SC S9 unassigned family S9 unassigned peptidases MER0059787 Swit_0050 Swit_0050
SC S9 unassigned family S9 unassigned peptidases MER0059646 Swit_0979
SC S9 unassigned family S9 unassigned peptidases MER0059633 Swit_1148
SC S9 unassigned family S9 unassigned peptidases MER0059524 Swit_1439
SC S9 unassigned family S9 unassigned peptidases MER0059508 Swit_1447
SC S9 unassigned family S9 unassigned peptidases MER0059437 Swit_1619
SC S9 unassigned family S9 unassigned peptidases MER0059352 Swit_1670
SC S9 unassigned family S9 unassigned peptidases MER0059151 Swit_2010
SC S9 unassigned family S9 unassigned peptidases MER0087398 Swit_2952
SC S9 unassigned family S9 unassigned peptidases MER0087400 Swit_3021
SC S9 unassigned family S9 unassigned peptidases MER0059113 Swit_3357
SC S9 unassigned family S9 unassigned peptidases MER0059112 Swit_3412
SC S9 unassigned family S9 unassigned peptidases MER0058627 Swit_3916
SC S9 unassigned family S9 unassigned peptidases MER0058151 Swit_4223
SC S9 unassigned family S9 unassigned peptidases MER0087458 Swit_4244
SC S9 unassigned family S9 unassigned peptidases MER0058117 Swit_4266
SC S10 unassigned family S10 unassigned peptidases MER0087460 Swit_1076
SC S10 unassigned family S10 unassigned peptidases MER0087461 Swit_1082
SC S10 unassigned family S10 unassigned peptidases MER0087419 Swit_2414
SC S10 unassigned family S10 unassigned peptidases MER0087420 Swit_2417
SC S10 unassigned family S10 unassigned peptidases MER0087391 Swit_3119
SC S10 unassigned family S10 unassigned peptidases MER0087445 Swit_3773
SC S10 unassigned family S10 unassigned peptidases MER0087455 Swit_4319
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1020180 Swit_3021
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1025961 Swit_5053
SC S15 unassigned family S15 unassigned peptidases MER0087408 Swit_0930
SC S15 unassigned family S15 unassigned peptidases MER0087409 Swit_0936
SC S15 unassigned family S15 unassigned peptidases MER0059673 Swit_0938
SC S15 unassigned family S15 unassigned peptidases MER0087395 Swit_3228
SC S33 S33.001 prolyl aminopeptidase MER0058109 Swit_4410
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0059777 Swit_0357
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0059709 Swit_0910
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0059447 Swit_1546
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0059345 Swit_1740
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0059255 Swit_1741
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0059153 Swit_1982
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0059117 Swit_3309
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0059116 Swit_3311
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0058132 Swit_4229
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0058129 Swit_4235
SC S33 unassigned family S33 unassigned peptidases MER1340047
SC S33 unassigned family S33 unassigned peptidases MER0059752 Swit_0888
SC S33 unassigned family S33 unassigned peptidases MER0059676 Swit_0937
SC S33 unassigned family S33 unassigned peptidases MER0059649 Swit_0978
SC S33 unassigned family S33 unassigned peptidases MER0059645 Swit_0994
SC S33 unassigned family S33 unassigned peptidases MER0059644 Swit_1008
SC S33 unassigned family S33 unassigned peptidases MER0059643 Swit_1033
SC S33 unassigned family S33 unassigned peptidases MER0059639 Swit_1070
SC S33 unassigned family S33 unassigned peptidases MER0059550 Swit_1245
SC S33 unassigned family S33 unassigned peptidases MER0059522 Swit_1445
SC S33 unassigned family S33 unassigned peptidases MER0059466 Swit_1528
SC S33 unassigned family S33 unassigned peptidases MER0059441 Swit_1572
SC S33 unassigned family S33 unassigned peptidases MER0059394 Swit_1653
SC S33 unassigned family S33 unassigned peptidases MER0059209 Swit_1744
SC S33 unassigned family S33 unassigned peptidases MER0059201 Swit_1754
SC S33 unassigned family S33 unassigned peptidases MER0059158 Swit_1827
SC S33 unassigned family S33 unassigned peptidases MER0059156 Swit_1907
SC S33 unassigned family S33 unassigned peptidases MER0059149 Swit_2094
SC S33 unassigned family S33 unassigned peptidases MER0059139 Swit_2483
SC S33 unassigned family S33 unassigned peptidases MER0059137 Swit_2666
SC S33 unassigned family S33 unassigned peptidases MER0059127 metX Swit_3005
SC S33 unassigned family S33 unassigned peptidases MER0059126 Swit_3055
SC S33 unassigned family S33 unassigned peptidases MER0059114 Swit_3338
SC S33 unassigned family S33 unassigned peptidases MER0058740 Swit_3858
SC S33 unassigned family S33 unassigned peptidases MER0058243 Swit_4183
SC S33 unassigned family S33 unassigned peptidases MER0058201 Swit_4215
SC S33 unassigned family S33 unassigned peptidases MER0058128 Swit_4236
SE S11 unassigned family S11 unassigned peptidases MER0087426 Swit_0483
SE S11 unassigned family S11 unassigned peptidases MER0059763 Swit_0788
SE S11 unassigned family S11 unassigned peptidases MER0087469 Swit_1363
SE S12 S12.A11 lact-2 g.p. (Caenorhabditis elegans) MER0059776 Swit_0367
SE S12 S12.A11 lact-2 g.p. (Caenorhabditis elegans) MER0059148 Swit_2099
SE S12 S12.A23 GYO_0385 g.p. (Bacillus subtilis) MER0059685 Swit_0919
SE S12 unassigned family S12 unassigned peptidases MER0059160 Swit_1818
SE S12 unassigned family S12 unassigned peptidases MER0059125 Swit_3079
SE S12 unassigned family S12 unassigned peptidases MER0058101 Swit_4612
SE S12 unassigned family S12 unassigned peptidases MER0058093 Swit_4706
SF S24 S24.001 repressor LexA MER0059119 lexA Swit_3216
SF S24 unassigned family S24 unassigned peptidases MER0059144 Swit_2209
SF S24 unassigned family S24 unassigned peptidases MER0058086 Swit_4824
SF S26 S26.001 signal peptidase I MER0087450 Swit_3871
SF S26 S26.014 TraF peptidase MER0091738 Swit_0182
SF S26 S26.014 TraF peptidase MER0091739 Swit_3685
SF S26 unassigned subfamily S26A unassigned peptidases MER0087404
SJ S16 S16.001 Lon-A peptidase MER0087424 Swit_0390
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0058454 Swit_4092
SJ S16 unassigned family S16 unassigned peptidases MER1327161
SJ S16 unassigned family S16 unassigned peptidases MER0087466 lon Swit_1146
SK S14 S14.001 peptidase Clp (type 1) MER0087430 clpP Swit_0593
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0087423 Swit_2190
SK S41 non-peptidase homologue subfamily S41A non-peptidase homologues MER0087396 Swit_4589
SK S41 unassigned subfamily S41A unassigned peptidases MER0087411 Swit_2547
SK S49 non-peptidase homologue subfamily S49C non-peptidase homologues MER1071675 Swit_2190
SK S49 unassigned subfamily S49A unassigned peptidases MER0087427 Swit_0522
SK S49 unassigned subfamily S49B unassigned peptidases MER1354659
ST S54 unassigned family S54 unassigned peptidases MER0059773 Swit_0440

GENOME ANALYSIS: Comparison with 18 completely sequenced genomes from genus Sphingomonas
Family Comment
C1 significant presence (1 homologues)
C14 significant presence (2 homologues)
C15 significant presence (1 homologues)
C26 lineage specific expansion (7 homologues)
C40 significant presence (2 homologues)
C44 lineage specific expansion (6 homologues)
C56 significant presence (4 homologues)
M10 significant presence (1 homologues)
M19 lineage specific expansion (4 homologues)
M20 lineage specific expansion (12 homologues)
M28 lineage specific expansion (8 homologues)
M38 significant presence (27 homologues)
M48 significant presence (6 homologues)
M50 significant presence (1 homologues)
M67 significant presence (1 homologues)
M81 significant presence (1 homologues)
S8 significant presence (2 homologues)
S9 lineage specific expansion (39 homologues)
S10 lineage specific expansion (7 homologues)
S12 lineage specific expansion (7 homologues)
S15 significant presence (6 homologues)
S16 lineage specific expansion (4 homologues)
S33 lineage specific expansion (38 homologues)
S45 significant presence (1 homologues)
S54 significant presence (1 homologues)
T1 significant presence (2 homologues)
T2 significant presence (1 homologues)