Shewanella loihica

Taxonomy
Taxonomy database identifier: 359303
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Alteromonadales
Family Alteromonadaceae
Genus Shewanella
Species loihica
Peptidase View peptidase sequences from Shewanella loihica
Count of known and putative peptidases: 146, non-peptidase homologues 69
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A1 unassigned subfamily A1A unassigned peptidases MER0129253 Shew_2996
AC A8 A08.001 signal peptidase II MER0082674 lspA Shew_1100
AD A24 A24.001 type 4 prepilin peptidase 1 MER0082741 Shew_3440
AE A31 unassigned family A31 unassigned peptidases MER0082717 Shew_1762
CA C93 unassigned family C93 unassigned peptidases MER0394724 Shew_0308
CL C60 unassigned subfamily C60A unassigned peptidases MER0082712 Shew_1794
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0244090 Shew_1490
CL C82 C82.A03 YnhG protein (Escherichia coli) MER0461303 Shew_1006
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0082710 Shew_1803
MA M1 M01.031 cold-active aminopeptidase (Colwellia psychrerythraea)-type peptidase MER0082665 Shew_2742
MA M1 non-peptidase homologue family M1 non-peptidase homologues MER0082713 Shew_0835
MA M2 unassigned family M2 unassigned peptidases MER0089646 Shew_2053
MA M3 M03.004 oligopeptidase A MER0082742 Shew_3657
MA M3 unassigned subfamily M3A unassigned peptidases MER0089652 Shew_2161
MA M3 unassigned subfamily M3A unassigned peptidases MER0089660 Shew_2212
MA M3 unassigned subfamily M3A unassigned peptidases MER0089674 Shew_2581
MA M6 unassigned family M6 unassigned peptidases MER0089752 Shew_3744
MA M9 unassigned subfamily M9A unassigned peptidases MER0089616 Shew_1685
MA M9 unassigned subfamily M9A unassigned peptidases MER0089689 Shew_2743
MA M9 unassigned subfamily M9A unassigned peptidases MER0089751 Shew_3732
MA M13 unassigned family M13 unassigned peptidases MER0089712 Shew_2973
MA M13 unassigned family M13 unassigned peptidases MER0089735 Shew_3426
MA M32 unassigned family M32 unassigned peptidases MER0082748 Shew_0947
MA M35 M35.003 EcpA peptidase MER0089593 Shew_1243
MA M41 M41.001 FtsH peptidase MER0082666 ftsH Shew_2834
MA M43 M43.001 cytophagalysin MER0089684 Shew_2701
MA M43 M43.008 Mername-AA293 peptidase MER0089723 Shew_3096
MA M48 M48.002 HtpX peptidase MER0082718 htpX Shew_1723
MA M48 M48.023 BepA (Escherichia coli) MER0082709 Shew_1841
MA M48 unassigned subfamily M48C unassigned peptidases MER0082705 Shew_2842
MA M56 unassigned family M56 unassigned peptidases MER0089714 Shew_2995
MA M61 unassigned family M61 unassigned peptidases MER0089690 Shew_2752
MA M90 unassigned family M90 unassigned peptidases MER0286910 Shew_1279
MC M14 non-peptidase homologue subfamily M14A non-peptidase homologues MER0089741 Shew_3555
MC M14 non-peptidase homologue subfamily M14B non-peptidase homologues MER0082731 Shew_0033
MC M14 non-peptidase homologue subfamily M14D non-peptidase homologues MER0082670 Shew_1937
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0082729 Shew_0105
MC M14 unassigned family M14 unassigned peptidases MER0089716 Shew_3019
MD M15 non-peptidase homologue subfamily M15C non-peptidase homologues MER0089630 Shew_1829
MD M15 unassigned subfamily M15B unassigned peptidases MER0082722 Shew_1861
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0089743 Shew_3580
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0089558 Shew_0655
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0089591 Shew_1226
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0089742 Shew_3580
ME M16 unassigned subfamily M16A unassigned peptidases MER0089668 Shew_2420
ME M16 unassigned subfamily M16B unassigned peptidases MER0089590 Shew_1226
ME M16 unassigned subfamily M16B unassigned peptidases MER0089744 Shew_3581
MF M17 M17.003 PepA aminopeptidase MER0082749 pepA Shew_0939
MF M17 M17.004 PepB aminopeptidase MER0082667 Shew_3127
MF M17 unassigned family M17 unassigned peptidases MER0082706 Shew_2851
MF M17 unassigned family M17 unassigned peptidases MER0082688 Shew_1677
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0082719 Shew_2636
MG M24 M24.003 Xaa-Pro dipeptidase (bacteria-type) MER0089522 pepQ Shew_0020
MG M24 unassigned subfamily M24B unassigned peptidases MER0082747 Shew_0952
MG M24 unassigned subfamily M24B unassigned peptidases MER0082746 Shew_0955
MG M24 unassigned subfamily M24B unassigned peptidases MER0082664 Shew_2358
MH M20 M20.003 peptidase T MER0082738 Shew_3250
MH M20 M20.007 Xaa-His dipeptidase MER0082707 Shew_2852
MH M20 unassigned subfamily M20A unassigned peptidases MER0089528 Shew_0201
MH M20 unassigned subfamily M20A unassigned peptidases MER0082745 Shew_0982
MH M20 unassigned subfamily M20A unassigned peptidases MER0089634 dapE1 Shew_1862
MH M20 unassigned subfamily M20A unassigned peptidases MER0089696 dapE2 Shew_2793
MH M20 unassigned family M20D unassigned peptidases MER0082720 Shew_2688
MH M20 unassigned family M20 unassigned peptidases MER0082675 Shew_2160
MH M28 non-peptidase homologue family M28 non-peptidase homologues MER0089635 Shew_1875
MH M28 unassigned subfamily M28D unassigned peptidases MER0082673 Shew_1094
MH M28 unassigned subfamily M28E unassigned peptidases MER0082677 Shew_1510
MH M28 unassigned subfamily M28F unassigned peptidases MER0082751 Shew_0532
MH M28 unassigned family M28 unassigned peptidases MER0082702 Shew_2592
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0082732 Shew_3107
MJ M38 M38.A02 PyrC protein (Escherichia coli) MER0089562 pyrC Shew_0728
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0089520 Shew_0013
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0089578 Shew_0983
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0089587 Shew_1117
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0089675 Shew_2586
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0089676 Shew_2586
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0089677 Shew_2587
MJ M38 unassigned family M38 unassigned peptidases MER0089640 Shew_1967
MJ M38 unassigned family M38 unassigned peptidases MER0089713 Shew_2992
MJ M38 unassigned family M38 unassigned peptidases MER0089754 hutI Shew_3759
MM M50 unassigned subfamily M50B unassigned peptidases MER0082701 Shew_2628
MM M50 unassigned subfamily M50B unassigned peptidases MER0082737 Shew_3232
MO M23 M23.011 YebA peptidase MER0082696 Shew_2455
MO M23 M23.014 ShyA D,D-endopeptidase (Vibrio cholerae) MER0082687 Shew_1021
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0089589 Shew_1212
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0082685 Shew_1474
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0082724 Shew_3807
MO M23 unassigned subfamily M23B unassigned peptidases MER0089738 Shew_3446
MS M75 unassigned family M75 unassigned peptidases MER0089559 Shew_0676
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0082754 Shew_0410
MU M103 M103.UNW family M103 non-peptidase homologues MER0082753 Shew_0416
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0327288
PA S1 S01.275 DegS peptidase MER0082740 Shew_3297
PA S1 unassigned subfamily S1C unassigned peptidases MER0082739 Shew_3296
PA S46 S46.003 dipeptidyl-peptidase BII (Pseudoxanthomonas mexicana) MER0089729 Shew_3187
PA S46 S46.003 dipeptidyl-peptidase BII (Pseudoxanthomonas mexicana) MER0089732 Shew_3279
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0089665 Shew_2302
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0089583 Shew_1032
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0089607 Shew_1509
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0089718 Shew_3038
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0089761 Shew_3839
PB C44 unassigned family C44 unassigned peptidases MER0089624 Shew_1778
PB C44 unassigned family C44 unassigned peptidases MER0089648 Shew_2107
PB C44 unassigned family C44 unassigned peptidases MER0089717 Shew_3036
PB C59 unassigned family C59 unassigned peptidases MER0089560 Shew_0681
PB C59 unassigned family C59 unassigned peptidases MER0089697 Shew_2805
PB S45 S45.003 cephalosporin C acylase precursor MER0089681 Shew_2669
PB T1 T01.006 HslV component of HslUV peptidase MER0082755 hslV Shew_0375
PB T2 unassigned family T2 unassigned peptidases MER0082686 Shew_2171
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0089650 Shew_2158
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0089555 Shew_0575
PC C26 C26.960 TrpD protein (anthranilate synthase component II) MER0089662 Shew_2252
PC C26 C26.961 PuuD protein MER0089576 Shew_0971
PC C26 C26.964 CTP synthetase MER0089588 pyrG Shew_1204
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0089657 hisH Shew_2201
PC C26 C26.A07 At1g63660 (Arabidopsis thaliana) MER0089595 guaA Shew_1298
PC C26 unassigned family C26 unassigned peptidases MER0089673 Shew_2532
PC C26 unassigned family C26 unassigned peptidases MER0441791 carA Shew_2839
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0089596 Shew_1301
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0089705 Shew_2856
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0089724 Shew_3106
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0089728 Shew_3186
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0089748 Shew_3669
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0089756 Shew_3785
PC S51 non-peptidase homologue family S51 non-peptidase homologues MER0082690 Shew_1665
PC S51 unassigned family S51 unassigned peptidases MER1357303
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0971723 Shew_0936
SB S8 unassigned subfamily S8A unassigned peptidases MER0082716 Shew_0781
SB S8 unassigned subfamily S8A unassigned peptidases MER0082715 Shew_0807
SB S8 unassigned subfamily S8A unassigned peptidases MER0082750 Shew_0935
SB S8 unassigned subfamily S8A unassigned peptidases MER0082691 Shew_2209
SB S8 unassigned subfamily S8A unassigned peptidases MER0082699 Shew_2720
SB S8 unassigned subfamily S8A unassigned peptidases MER0082704 Shew_2960
SB S8 unassigned subfamily S8A unassigned peptidases MER0082736 Shew_3152
SB S8 unassigned subfamily S8A unassigned peptidases MER0089760 Shew_3821
SB S8 unassigned subfamily S8A unassigned peptidases MER0082703 Shew_3864
SB S8 unassigned subfamily S8A unassigned peptidases MER0082679 Shew_2208
SB S8 unassigned subfamily S8A unassigned peptidases MER0082695 Shew_2443
SC S9 S09.010 oligopeptidase B MER0082730 Shew_0039
SC S9 S09.012 dipeptidyl-peptidase 5 MER0082721 Shew_1905
SC S9 S09.940 S-formylglutathione hydrolase FrmB (Escherichi coli) MER0089611 Shew_1541
SC S9 S09.952 acyl-protein thioesterase 1 (Schizosaccharomyces pombe) MER0089649 Shew_2136
SC S9 S09.A77 dpf-6 g.p. (Caenorhabditis elegans) MER0082727 Shew_3485
SC S9 S09.B03 DDB_G0288631 g.p. (Dictyostelium discoideum) MER0082689 Shew_1675
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER0089719 Shew_3047
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0089565 Shew_0788
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0089643 Shew_1978
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0089644 Shew_1979
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0212952 Shew_1666
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0214903 Shew_2744
SC S9 unassigned subfamily S9A unassigned peptidases MER0082743 Shew_0774 Shew_0774
SC S9 unassigned subfamily S9A unassigned peptidases MER0082676 Shew_1522
SC S9 unassigned subfamily S9B unassigned peptidases MER0082723 Shew_0576
SC S9 unassigned subfamily S9C unassigned peptidases MER0082752 Shew_0490
SC S9 unassigned subfamily S9C unassigned peptidases MER0089692 Shew_2763
SC S9 unassigned subfamily S9C unassigned peptidases MER1303044
SC S9 unassigned family S9 unassigned peptidases MER0082757 Shew_0257
SC S9 unassigned family S9 unassigned peptidases MER0089682 Shew_2671
SC S9 unassigned family S9 unassigned peptidases MER0089685 Shew_2712
SC S9 unassigned family S9 unassigned peptidases MER0082693 Shew_2759
SC S10 unassigned family S10 unassigned peptidases MER0082733 Shew_3077
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1020680 Shew_0576
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1022602 Shew_1978
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1021243 Shew_2712
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER0082708 Shew_2869
SC S33 S33.001 prolyl aminopeptidase MER0089740 Shew_3544
SC S33 S33.A46 YheT protein (Escherichia coli) MER0089557 Shew_0589
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0089617 Shew_1714
SC S33 unassigned family S33 unassigned peptidases MER0089525 Shew_0079
SC S33 unassigned family S33 unassigned peptidases MER0089632 Shew_1860
SC S33 unassigned family S33 unassigned peptidases MER0089637 Shew_1920
SC S33 unassigned family S33 unassigned peptidases MER0089655 Shew_2189
SC S33 unassigned family S33 unassigned peptidases MER0089664 Shew_2270
SC S33 unassigned family S33 unassigned peptidases MER0089699 Shew_2809
SC S33 unassigned family S33 unassigned peptidases MER0089715 Shew_3018
SC S33 unassigned family S33 unassigned peptidases MER0089745 Shew_3600
SC S33 unassigned family S33 unassigned peptidases MER0089746 bioH Shew_3630
SC S33 unassigned family S33 unassigned peptidases MER0089750 Shew_3723
SC S33 unassigned family S33 unassigned peptidases MER0089755 Shew_3780
SE S11 unassigned family S11 unassigned peptidases MER0089707 Shew_2939
SE S12 unassigned family S12 unassigned peptidases MER0089579 Shew_0984
SE S12 unassigned family S12 unassigned peptidases MER0089641 Shew_1968
SE S12 unassigned family S12 unassigned peptidases MER0089711 Shew_2964
SE S12 unassigned family S12 unassigned peptidases MER0082734 Shew_3053
SE S12 unassigned family S12 unassigned peptidases MER0089721 Shew_3058
SE S13 S13.001 D-Ala-D-Ala peptidase C MER0082697 Shew_1962
SF S24 S24.001 repressor LexA MER0082728 lexA Shew_0127
SF S26 S26.001 signal peptidase I MER0082671 Shew_1053
SF S26 S26.026 PA1303 peptidase (Pseudomonas sp.) MER0082756 Shew_0362
SJ S16 S16.001 Lon-A peptidase MER0082684 Shew_2506
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0089698 Shew_2807
SJ S16 S16.A10 ycbZ (Escherichia coli) MER0089629 Shew_1818
SJ S16 unassigned family S16 unassigned peptidases MER0082698 Shew_1976
SK S14 S14.001 peptidase Clp (type 1) MER0082663 clpP Shew_2508
SK S41 S41.001 C-terminal processing peptidase-1 MER0082711 Shew_1802
SK S41 S41.004 C-terminal processing peptidase-3 MER0082725 Shew_3808
SK S41 S41.012 Pep putative peptidase (Vibrio-type) MER0082700 Shew_2716
SK S41 non-peptidase homologue subfamily S41A non-peptidase homologues MER0082726 Shew_3801
SK S41 non-peptidase homologue subfamily S41B non-peptidase homologues MER0082681
SK S41 non-peptidase homologue subfamily S41B non-peptidase homologues MER0164020
SK S41 non-peptidase homologue family S41 non-peptidase homologues MER0082680 Shew_1234
SK S41 non-peptidase homologue family S41 non-peptidase homologues MER0164019
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER0082672 Shew_2407
SK S49 unassigned subfamily S49B unassigned peptidases MER0089625 Shew_1786
ST S54 S54.016 GlpG peptidase (Escherichia-type) MER0089749 Shew_3712
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0089561 Shew_0702
ST S54 unassigned family S54 unassigned peptidases MER0089647 Shew_2063
U- U32 U32.002 collagenase (Helicobacter-type) MER0082694 Shew_2783
U- U32 U32.003 collagenase (Salmonella-type) MER0082714 Shew_0818
U- U32 U32.A01 YhbV protein (Escherichia coli) MER0082692 Shew_2788
U- U32 unassigned family U32 unassigned peptidases MER0089694 Shew_2787

GENOME ANALYSIS: Comparison with 24 completely sequenced genomes from genus Shewanella
Family Comment
S15 lineage specific expansion (4 homologues)