Bifidobacterium bifidum

Taxonomy
Taxonomy database identifier: 1681
Superkingdom Bacteria
Phylum Firmicutes
Class Actinobacteria
Subclass Actinobacteridae
Order Bifidobacteriales
Family Bifidobacteriaceae
Genus Bifidobacterium
Species bifidum
Peptidase View peptidase sequences from Bifidobacterium bifidum
Count of known and putative peptidases: 33, non-peptidase homologues 9
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0215233 lspA BBB_0466
AD A24 non-peptidase homologue subfamily A24A non-peptidase homologues MER0659260 BBBF_0808/BBNG_00746/BIFBIF_0/BIFI_1313
CA C1 unassigned subfamily C1B unassigned peptidases MER0278881 BBPR_1612
CA C1 unassigned subfamily C1B unassigned peptidases MER1166529 pepC
CA C1 unassigned subfamily C1B unassigned peptidases MER0241585 pepC
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0292514 pcp1 BBIF_1377
CF C15 non-peptidase homologue family C15 non-peptidase homologues MER0292593 BBNG_01489
CL C60 C60.007 sortase C1 (Streptococcus sp.) MER0186260 BBNG_01754
CL C60 unassigned subfamily C60A unassigned peptidases MER0316067 BBPR_0284
CL C60 unassigned subfamily C60A unassigned peptidases MER0316075 BBPR_1709
CL C82 unassigned subfamily C82A unassigned peptidases MER0186456 BBIF_0419
CO C40 C40.006 PgpA peptidase MER0376977 BBPR_1480
G- G5 unassigned family G5 unassigned peptidases MER0912178 B217_10146
MA M1 M01.009 aminopeptidase N (actinomycete-type) MER0292373 pepN BBNG_00348
MA M10 unassigned subfamily M10A unassigned peptidases MER0825465 BIFBIF_00713/BIFI_1854
MA M13 unassigned family M13 unassigned peptidases MER0313250 pepO BBPR_1379
MA M13 unassigned family M13 unassigned peptidases MER0314730 B217_07604
MA M41 M41.015 MsFtsH g.p. (Mycobacterium smegmatis) MER0362958 ftsH BBNG_01654
MA M48 unassigned subfamily M48B unassigned peptidases MER0289620 htpX BBPR_0129
MA M78 unassigned family M78 unassigned peptidases MER0908744 B217_04044/BBBF_0876/BIFI_1379
MC M14 non-peptidase homologue subfamily M14B non-peptidase homologues MER0469315 BBIF_0285
MD M15 unassigned subfamily M15B unassigned peptidases MER0228516 vanYG BBPR_1048
MG M24 M24.033 aminopeptidase P (Streptomyces-type) MER0237430 pepP BBNG_00490
MG M24 unassigned subfamily M24A unassigned peptidases MER0395571 map BBNG_01711
MH M20 non-peptidase homologue subfamily M20F non-peptidase homologues MER0792490 argE/B216_/BBBF_0686/BBIF_0723/BIFI_1194
MH M20 unassigned family M20D unassigned peptidases MER0368505 BBPR_1238
MH M20 unassigned subfamily M20F unassigned peptidases MER0853464 BIFBIF_01180
PA S1 S01.494 Htra2 peptidase (Mycobacterium-type) MER0407376 BBNG_00046/degP BBPR_0126
PA S1 unassigned subfamily S1C unassigned peptidases MER0900238 BBBF_0134/BIFI_0625/degP
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0454481 purF BBPR_1311
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458237 gltB BBPR_0842
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0120497 glmS
PB C44 unassigned family C44 unassigned peptidases MER0458245 glmS BBPR_0787
PB C59 C59.951 choloylglycine hydrolase MER0045687 bsh/cbh BBNG_00791
PB C59 unassigned family C59 unassigned peptidases MER0914909 BN549_01314
PB C69 C69.001 dipeptidase A MER0236703 pepD BBIF_0217
PB C69 C69.001 dipeptidase A MER0236972 pepDA/pepDB BBIF_1641
PB T2 unassigned family T2 unassigned peptidases MER0276421 BBIF_1156
PC C26 C26.957 GMP synthase MER0441664 guaA BBPR_0767
PC C26 C26.959 TRP3 protein MER0436372
PC C26 C26.964 CTP synthetase MER0451036
PC C26 C26.A32 imidazoleglycerol-phosphate synthase (Pyrococcus furiosus) MER0450593 pdxT BBPR_0376
PC C26 unassigned family C26 unassigned peptidases MER0449782 hisH BBIF_0553
PC C26 unassigned family C26 unassigned peptidases MER0443395 carA BBPR_1288
PC C26 unassigned family C26 unassigned peptidases MER0445225
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0385127 BBNG_00691
PC S51 unassigned family S51 unassigned peptidases MER0229542 BBNG_00695
PE T5 unassigned family T5 unassigned peptidases MER0380741 argJ BBIF_1102
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0976295 B217_09357
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0976296 B217_09357
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0989361 BN549_00498
SB S8 unassigned subfamily S8A unassigned peptidases MER0982074 BBBF_0061/BIFI_0554
SB S8 unassigned subfamily S8A unassigned peptidases MER0967826 BBBF_1726/BBIF_1681/BIFI_0393
SB S8 unassigned subfamily S8A unassigned peptidases MER0982673 vpr
SB S8 unassigned subfamily S8A unassigned peptidases MER0988571 B216_02693/BN549_01182
SB S8 unassigned subfamily S8A unassigned peptidases MER0983390 BIFBIF_00104
SC S9 unassigned subfamily S9A unassigned peptidases MER0489384 ptrB BBPR_0395
SC S9 unassigned subfamily S9B unassigned peptidases MER0489385 BBPR_0868
SC S9 unassigned subfamily S9B unassigned peptidases MER0192277
SC S9 unassigned family S9 unassigned peptidases MER0210036
SC S10 unassigned family S10 unassigned peptidases MER0490358 BBPR_1089
SE S13 non-peptidase homologue family S13 non-peptidase homologues MER1030109 B217_10748
SE S13 non-peptidase homologue family S13 non-peptidase homologues MER1029398 B217_09642
SE S13 unassigned family S13 unassigned peptidases MER1028807 BBBF_1444/BBIF_139/BIFI_0107/BN549_00940
SF S24 S24.001 repressor LexA MER0375459 lexA BBNG_00460
SF S24 S24.003 UmuD protein MER0371043 impA BBPR_0732
SF S24 unassigned family S24 unassigned peptidases MER1041820 cI
SF S26 S26.025 signal peptidase sipX MER0402023 lepB BBIF_0379
SH S78 unassigned family S78 unassigned peptidases MER1086367 BBB_1639
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0474405 radA BBPR_1518
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1030410 A0008_16/A0008_1672/B216_07887/BBBF_1208
SJ S16 unassigned family S16 unassigned peptidases MER0473349 BBPR_0473
SK S14 S14.008 ClpP1 peptidase (Streptomyces-type) MER0358730 clp1 BBIF_1178
SK S14 S14.009 ClpP2 peptidase (Streptomyces-type) MER0359060 clp2/clpP2 BBPR_1228
ST S54 non-peptidase homologue family S54 non-peptidase homologues MER1081742 B216_03072/BBIF_0128
ST S54 unassigned family S54 unassigned peptidases MER1075313 B217_05841/BBBF_/BBNG_00014/BIFBIF_00071/BIFI_0582
U- U32 unassigned family U32 unassigned peptidases MER0403895
U- U72 U72.001 Dop isopeptidase MER0402611
U- U72 unassigned family U72 unassigned peptidases MER0398196

GENOME ANALYSIS: Comparison with 41 completely sequenced genomes from genus Bifidobacterium
Family Comment
C56 significant presence (1 homologues)
M10 significant presence (1 homologues)
M14 significant presence (1 homologues)
M15 significant presence (1 homologues)
M78 significant presence (1 homologues)
S8 significant presence (8 homologues)
S10 significant presence (1 homologues)
T2 significant presence (1 homologues)