Agrobacterium sp. H13-3

Taxonomy
Taxonomy database identifier: 861208
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Rhodospirillales
Family Rhizobiaceae
Genus Agrobacterium
Species sp. H13-3
Peptidase View peptidase sequences from Agrobacterium sp. H13-3
Count of known and putative peptidases: 84, non-peptidase homologues 26
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 A32.001 PerP peptidase (Caulobacter sp.) MER0241700 AGROH133_07063
AA A32 unassigned family A32 unassigned peptidases MER0241708 AGROH133_03029
AC A8 unassigned family A8 unassigned peptidases MER0240662 lspA AGROH133_03512
AD A24 unassigned subfamily A24A unassigned peptidases MER0426988 ctpB AGROH133_03282
AF A26 unassigned family A26 unassigned peptidases MER0240170 AGROH133_05297
CL C82 C82.003 ykuD transpeptidase MER0463210 AGROH133_02862
CL C82 C82.003 ykuD transpeptidase MER0461558 AGROH133_04195
CL C82 C82.003 ykuD transpeptidase MER0463212 AGROH133_04590
CL C82 C82.003 ykuD transpeptidase MER0463213 AGROH133_08049
CL C82 C82.003 ykuD transpeptidase MER0463214 AGROH133_14409
CL C82 C82.003 ykuD transpeptidase MER0463223 AGROH133_11229
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0243930 AGROH133_11230
CL C82 unassigned subfamily C82A unassigned peptidases MER0243885 AGROH133_11965
CL C82 unassigned subfamily C82A unassigned peptidases MER0463211 AGROH133_04588
CL C82 unassigned subfamily C82A unassigned peptidases MER0240168 AGROH133_05714
CL C82 unassigned subfamily C82A unassigned peptidases MER0461559 AGROH133_07496
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0240045 AGROH133_03257
CO C40 unassigned family C40 unassigned peptidases MER0453656 AGROH133_04867
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0296740 AGROH133_08832
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0240543 pepN AGROH133_04922
MA M3 unassigned subfamily M3A unassigned peptidases MER0240024 dcp AGROH133_08902
MA M3 unassigned subfamily M3B unassigned peptidases MER0342559 AGROH133_12135
MA M41 M41.001 FtsH peptidase MER0300776 ftsH AGROH133_12006
MA M48 unassigned subfamily M48B unassigned peptidases MER0240900 htpX AGROH133_09293
MA M48 unassigned subfamily M48C unassigned peptidases MER0240513 AGROH133_09060
MD M15 unassigned subfamily M15B unassigned peptidases MER0469664 AGROH133_06876
MD M74 unassigned family M74 unassigned peptidases MER0240649 mepA AGROH133_03164
ME M16 unassigned subfamily M16B unassigned peptidases MER0240466 AGROH133_04461
MF M17 unassigned family M17 unassigned peptidases MER0240046 AGROH133_03261
MF M17 unassigned family M17 unassigned peptidases MER0240129 pepA AGROH133_05245
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0240894 map AGROH133_06423
MG M24 M24.009 aminopeptidase P1 MER0240144 AGROH133_07370
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0483389 AGROH133_10639
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0483383 pepQ AGROH133_07721
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0483388 AGROH133_09405
MG M24 unassigned subfamily M24A unassigned peptidases MER0240279 map AGROH133_07978
MG M24 unassigned subfamily M24B unassigned peptidases MER0396335 AGROH133_12940
MH M20 unassigned subfamily M20A unassigned peptidases MER0240717 dapE AGROH133_03574
MH M20 unassigned family M20D unassigned peptidases MER0240546 hipO AGROH133_09123
MH M20 unassigned family M20D unassigned peptidases MER0240470 AGROH133_14534
MH M20 unassigned family M20D unassigned peptidases MER0374043 AGROH133_11148
MH M20 unassigned family M20D unassigned peptidases MER0474666 AGROH133_11359
MH M20 unassigned family M20D unassigned peptidases MER0372526 AGROH133_11503
MH M20 unassigned family M20D unassigned peptidases MER0372338 AGROH133_11544
MH M20 unassigned family M20D unassigned peptidases MER0304058 AGROH133_11970
MH M20 unassigned family M20D unassigned peptidases MER0372593 AGROH133_13237
MH M20 unassigned family M20D unassigned peptidases MER0372830 AGROH133_13599
MH M20 unassigned family M20D unassigned peptidases MER0368098 AGROH133_13655
MH M20 unassigned family M20 unassigned peptidases MER0240530 dapE AGROH133_02962
MH M20 unassigned family M20 unassigned peptidases MER0240037 AGROH133_04785
MH M20 unassigned family M20 unassigned peptidases MER0240401 amaB AGROH133_08152
MH M20 unassigned family M20 unassigned peptidases MER0240187 AGROH133_15235
MJ M19 unassigned family M19 unassigned peptidases MER0240396 AGROH133_08545
MJ M19 unassigned family M19 unassigned peptidases MER0341405 AGROH133_13601
MJ M38 M38.973 dihydropyrimidinase MER0240799 dht AGROH133_08153
MJ M38 M38.982 urease MER0240820 ureC AGROH133_08199
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0240198 pyrC AGROH133_05747
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0240288 gda AGROH133_07997
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0240412 lppB AGROH133_06618
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0240413 lppB AGROH133_06618
MO M23 non-peptidase homologue family M23 non-peptidase homologues MER0240831 AGROH133_09222
MO M23 unassigned subfamily M23B unassigned peptidases MER0240651 AGROH133_06921
MO M23 unassigned subfamily M23B unassigned peptidases MER0387602 AGROH133_13065
MQ M29 M29.001 aminopeptidase T MER0240169 ampS AGROH133_03392
MS M75 M75.001 imelysin MER0240185 AGROH133_03412
MT M81 unassigned family M81 unassigned peptidases MER0317500 AGROH133_08764
MT M81 unassigned family M81 unassigned peptidases MER0317460 AGROH133_12488
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0240425 tldD AGROH133_04389
MU M103 M103.950 microcin-processing peptidase 1 homologue MER0240312 pmbA AGROH133_04251
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0240730 flhB AGROH133_03963
PA S1 unassigned subfamily S1C unassigned peptidases MER0240532 dop AGROH133_04907
PA S1 unassigned subfamily S1C unassigned peptidases MER0240146 htrA AGROH133_07092
PA S1 unassigned subfamily S1C unassigned peptidases MER0240732 htrA AGROH133_07302
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0240047 purF AGROH133_05156
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458333 AGROH133_12173
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0240567 glmS AGROH133_06790
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0458335 AGROH133_13320
PB C44 unassigned family C44 unassigned peptidases MER0240596 gltB AGROH133_03081
PB C44 unassigned family C44 unassigned peptidases MER0458334 AGROH133_12305
PB C59 unassigned family C59 unassigned peptidases MER0280427 AGROH133_14008
PB T1 T01.006 HslV component of HslUV peptidase MER0240034 hslV AGROH133_02857
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0240671 AGROH133_15042
PB T3 T03.014 gamma-glutamyltransferase 2 (bacterial) MER0379947 AGROH133_10371
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0240259 trpE AGROH133_07937
PC C26 C26.957 GMP synthase MER0240173 guaA2 AGROH133_03398
PC C26 C26.961 PuuD protein MER0448043 AGROH133_11346
PC C26 C26.964 CTP synthetase MER0450320 pyrG AGROH133_06440
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0445596 hisH AGROH133_02851
PC C26 unassigned family C26 unassigned peptidases MER0240090 guaA1 AGROH133_03300
PC C26 unassigned family C26 unassigned peptidases MER0240290 carA AGROH133_07598
PC C26 unassigned family C26 unassigned peptidases MER0240020 guaA AGROH133_08885
PC C56 C56.001 PfpI peptidase MER0310889 AGROH133_13003
PC C56 C56.006 Hsp31 peptidase MER0240534 AGROH133_14589
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0384995 AGROH133_13636
PE P1 P01.101 pantetheinyl hydrolase ThnT precursor MER0240886 AGROH133_08708
PE P1 unassigned family P01 unassigned peptidases MER0240375 AGROH133_08521
PE T5 T05.001 ornithine acetyltransferase precursor MER0307719 argJ AGROH133_11695
SC S9 S09.010 oligopeptidase B MER0239974 ptrB AGROH133_04686
SC S9 S09.940 S-formylglutathione hydrolase FrmB (Escherichi coli) MER0240826 AGROH133_06009
SC S9 unassigned family S9 unassigned peptidases MER0240131 AGROH133_03351
SC S9 unassigned family S9 unassigned peptidases MER0240913 AGROH133_06438
SC S9 unassigned family S9 unassigned peptidases MER0477437 AGROH133_14683
SC S9 unassigned family S9 unassigned peptidases MER0490230 AGROH133_10361
SC S33 S33.001 prolyl aminopeptidase MER0240044 pip AGROH133_05149
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0240502 AGROH133_14568
SE S11 non-peptidase homologue family S11 non-peptidase homologues MER0240263 dac AGROH133_06116
SE S11 unassigned family S11 unassigned peptidases MER0240278 dac AGROH133_06131
SE S11 unassigned family S11 unassigned peptidases MER0240308 dacF AGROH133_08017
SE S11 unassigned family S11 unassigned peptidases MER0352077 AGROH133_11968
SE S12 S12.950 esterase EstB MER0239939 AGROH133_14421
SE S12 S12.A23 GYO_0385 g.p. (Bacillus subtilis) MER0240150 AGROH133_07096
SE S12 unassigned family S12 unassigned peptidases MER0240378 AGROH133_08525
SE S12 unassigned family S12 unassigned peptidases MER0240460 AGROH133_14293
SE S12 unassigned family S12 unassigned peptidases MER0354599 AGROH133_10393
SE S12 unassigned family S12 unassigned peptidases MER0354509 AGROH133_14083
SF S24 S24.001 repressor LexA MER0240731 lexA AGROH133_05913
SF S24 unassigned family S24 unassigned peptidases MER0240201 c1 AGROH133_03758
SF S26 S26.001 signal peptidase I MER0240626 sigF AGROH133_05026
SH S78 S78.001 prohead peptidase (bacteriophage HK97) MER0240096 gp35 AGROH133_04845
SH S78 unassigned family S78 unassigned peptidases MER0240622 AGROH133_06887
SJ S16 S16.001 Lon-A peptidase MER0240762 lon AGROH133_05609
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0240063 radA AGROH133_05162
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0240610 AGROH133_03461
SK S14 S14.001 peptidase Clp (type 1) MER0240747 clpP AGROH133_05606
SK S14 S14.001 peptidase Clp (type 1) MER0240918 clpP AGROH133_06449
SK S14 unassigned family S14 unassigned peptidases MER0240855 clpP AGROH133_07881
SK S41 unassigned subfamily S41A unassigned peptidases MER0240811 ctpA AGROH133_09219
SK S49 unassigned subfamily S49B unassigned peptidases MER0240342 AGROH133_06200
U- U69 unassigned family U69 unassigned peptidases MER0240230 AGROH133_15328
U- U69 unassigned family U69 unassigned peptidases MER0240231 AGROH133_15328

GENOME ANALYSIS: Comparison with 38 completely sequenced genomes from family Rhizobiaceae
Family Comment
C59 significant presence (1 homologues)
U69 significant presence (2 homologues)