Stenotrophomonas sp. SKA14

Taxonomy
Taxonomy database identifier: 391601
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Xanthomonadales
Genus Stenotrophomonas
Family Xanthomonadaceae
Species sp. SKA14
Peptidase View peptidase sequences from Stenotrophomonas sp. SKA14
Count of known and putative peptidases: 110, non-peptidase homologues 24
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1377512
AC A8 unassigned family A8 unassigned peptidases MER0324521 lspA
AC A8 unassigned family A8 unassigned peptidases MER0401430 SSKA14_1563
AD A24 A24.001 type 4 prepilin peptidase 1 MER0178703 pilD SSKA14_4486
AD A24 unassigned subfamily A24A unassigned peptidases MER0427133 cpaA
CA C39 unassigned family C39 unassigned peptidases MER0446040
CD C14 unassigned subfamily C14B unassigned peptidases MER0241281
CL C82 unassigned subfamily C82A unassigned peptidases MER0170884 SSKA14_634
CL C82 unassigned subfamily C82A unassigned peptidases MER0462217
CO C40 C40.006 PgpA peptidase MER0172045 SSKA14_1981
CO C40 C40.006 PgpA peptidase MER0172155 nlpC SSKA14_1984
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0177493
CO C40 unassigned family C40 unassigned peptidases MER1172213
G- G5 unassigned family G5 unassigned peptidases MER0940077 SSKA14_3829
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0347842
MA M1 M01.031 cold-active aminopeptidase (Colwellia psychrerythraea)-type peptidase MER0171754 pepN SSKA14_1725
MA M2 unassigned family M2 unassigned peptidases MER0171461 SSKA14_1362
MA M3 M03.004 oligopeptidase A MER0178158 opdA SSKA14_3623
MA M3 M03.005 peptidyl-dipeptidase Dcp MER0177065 SSKA14_2165
MA M3 unassigned subfamily M3A unassigned peptidases MER0178253 SSKA14_3688
MA M3 unassigned family M3 unassigned peptidases MER0822179 SSKA14_1848
MA M13 non-peptidase homologue family M13 non-peptidase homologues MER0176947 SSKA14_123
MA M13 unassigned family M13 unassigned peptidases MER0171279 SSKA14_1031
MA M13 unassigned family M13 unassigned peptidases MER0177779 SSKA14_3039
MA M13 unassigned family M13 unassigned peptidases MER0178297 SSKA14_3760
MA M41 M41.001 FtsH peptidase MER0300682
MA M48 M48.002 HtpX peptidase MER0172261 htpX SSKA14_2105
MA M48 M48.A03 YcaL protein (Escherichia coli) MER0884143 SSKA14_4351
MA M48 unassigned subfamily M48C unassigned peptidases MER0889125 SSKA14_4354
MA M56 unassigned family M56 unassigned peptidases MER0933495 SSKA14_774
MA M56 unassigned family M56 unassigned peptidases MER0934832 SSKA14_4286
MA M61 unassigned family M61 unassigned peptidases MER0171227 SSKA14_956
MA M72 unassigned family M72 unassigned peptidases MER0247156
MA M90 unassigned family M90 unassigned peptidases MER0321642
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0469016
MD M15 unassigned subfamily M15B unassigned peptidases MER0178192 SSKA14_3657
MD M15 unassigned subfamily M15C unassigned peptidases MER0469798 SSKA14_1925
MD M15 unassigned subfamily M15C unassigned peptidases MER0469797
MD M15 unassigned subfamily M15D unassigned peptidases MER0171805 SSKA14_1738
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0177970 SSKA14_3267
ME M16 unassigned subfamily M16B unassigned peptidases MER0177969 SSKA14_3267
MF M17 M17.003 PepA aminopeptidase MER0177014 pepA SSKA14_857
MF M17 unassigned family M17 unassigned peptidases MER0171854 SSKA14_1750
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0172095 map_1 SSKA14_1982
MG M24 unassigned subfamily M24A unassigned peptidases MER0171390 map_2 SSKA14_1176
MG M24 unassigned subfamily M24B unassigned peptidases MER0170534 pepP SSKA14_151
MG M24 unassigned subfamily M24B unassigned peptidases MER0177536 pepQ SSKA14_2546
MG M24 unassigned subfamily M24B unassigned peptidases MER1244308
MH M20 M20.A18 DDB_G0279291 g.p. (Dictyostelium discoideum) MER0853395 dapE_2
MH M20 unassigned subfamily M20A unassigned peptidases MER0850839 dapE_1
MH M20 unassigned family M20D unassigned peptidases MER0172316 SSKA14_2132
MH M20 unassigned family M20D unassigned peptidases MER0178451 ammA SSKA14_4005
MH M28 unassigned subfamily M28D unassigned peptidases MER0178119 SSKA14_3472
MH M28 unassigned subfamily M28D unassigned peptidases MER0178225 SSKA14_3671
MH M28 unassigned subfamily M28E unassigned peptidases MER0177117 SSKA14_2186
MH M28 unassigned subfamily M28E unassigned peptidases MER0177276 SSKA14_2261
MH M28 unassigned subfamily M28E unassigned peptidases MER0177714 SSKA14_2724
MH M28 unassigned subfamily M28E unassigned peptidases MER1251387
MJ M19 M19.012 Caul_3875-type dipeptidase MER0171234 SSKA14_999
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0872718 SSKA14_2611
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0858867 hutI
MM M50 unassigned subfamily M50B unassigned peptidases MER0897895 rseP
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0178371 SSKA14_3942
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0478341 ygeR
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0479150
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0479784
MO M23 unassigned subfamily M23B unassigned peptidases MER0170822 SSKA14_543
MO M23 unassigned subfamily M23B unassigned peptidases MER0171040 SSKA14_688
MO M23 unassigned subfamily M23B unassigned peptidases MER0177390 SSKA14_2361
MO M23 unassigned subfamily M23B unassigned peptidases MER0177773 SSKA14_2938
MO M23 unassigned subfamily M23B unassigned peptidases MER0177616 SSKA14_2668
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0171701 tldD_3 SSKA14_1703
MU M103 M103.950 microcin-processing peptidase 1 homologue MER0178338 pmbA SSKA14_3895
MU M103 M103.UNW family M103 non-peptidase homologues MER0178489 tldD_2 SSKA14_4093
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0326958
PA S1 S01.035 brachyurin-T MER0178569 SSKA14_4187
PA S1 unassigned subfamily S1C unassigned peptidases MER0244231 algW SSKA14_3561
PA S1 unassigned subfamily S1C unassigned peptidases MER0327648 degQ SSKA14_1532
PA S46 S46.003 dipeptidyl-peptidase BII (Pseudoxanthomonas mexicana) MER0171948 SSKA14_1957
PA S46 S46.003 dipeptidyl-peptidase BII (Pseudoxanthomonas mexicana) MER0178462 SSKA14_4080
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0456123 purF
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0459293
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0459294 asnB_2
PB C59 unassigned family C59 unassigned peptidases MER0171422 SSKA14_1235
PB S45 S45.003 cephalosporin C acylase precursor MER1063599 SSKA14_846
PB T1 T01.006 HslV component of HslUV peptidase MER0155723 hslV SSKA14_216
PB T2 unassigned family T2 unassigned peptidases MER0171560 asnA SSKA14_1553
PB T2 unassigned family T2 unassigned peptidases MER0177199 iaaA SSKA14_2202
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0178504 ggt_2 SSKA14_4094
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0177245 ggt_1 SSKA14_2219
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0436243 trpG
PC C26 C26.957 GMP synthase MER0442876 guaA_2
PC C26 C26.961 PuuD protein MER0450543 guaA_3
PC C26 C26.964 CTP synthetase MER0450686 pyrG
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0447830 hisH
PC C26 unassigned family C26 unassigned peptidases MER0450983
PC C26 unassigned family C26 unassigned peptidases MER0441408 carA
PC C26 unassigned family C26 unassigned peptidases MER0444341 guaA_1
PC C56 C56.001 PfpI peptidase MER0178302 pfpI SSKA14_3857
PC C56 C56.006 Hsp31 peptidase MER0170585 SSKA14_194
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0171203 SSKA14_788
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0171219 SSKA14_953
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0171243
PC S51 S51.003 cyanophycinase MER1061731 SSKA14_2635
SB S8 S08.110 keratinase K1 (Stenotrophomonas maltophilia) MER0171668 SSKA14_1641
SB S8 S08.110 keratinase K1 (Stenotrophomonas maltophilia) MER0177451 SSKA14_2363
SB S8 S08.160 NalP g.p. (Neisseria meningitidis) MER0178535 SSKA14_4181
SB S8 unassigned subfamily S8A unassigned peptidases MER0974040 SSKA14_3970
SB S8 unassigned subfamily S8B unassigned peptidases MER0171361 SSKA14_1164
SC S9 S09.009 dipeptidyl-peptidase 4 (bacteria-type 1) MER0178607 SSKA14_4200
SC S9 S09.010 oligopeptidase B MER0177019 SSKA14_877
SC S9 S09.012 dipeptidyl-peptidase 5 MER0404939
SC S9 S09.021 glutamyl endopeptidase C MER0171626 SSKA14_1638
SC S9 S09.021 glutamyl endopeptidase C MER0178642 SSKA14_4248
SC S9 S09.A77 dpf-6 g.p. (Caenorhabditis elegans) MER0170636 SSKA14_313 SSKA14_313
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0209728
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0213137
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0212845
SC S9 unassigned subfamily S9A unassigned peptidases MER0178674 SSKA14_4252
SC S9 unassigned subfamily S9B unassigned peptidases MER0999164 fghA
SC S9 unassigned subfamily S9B unassigned peptidases MER0177164 SSKA14_2198 SSKA14_2198
SC S9 unassigned subfamily S9B unassigned peptidases MER0172210 SSKA14_2082
SC S9 unassigned subfamily S9B unassigned peptidases MER0479295
SC S9 unassigned family S9 unassigned peptidases MER0171169 SSKA14_746 SSKA14_746
SC S9 unassigned family S9 unassigned peptidases MER0178411 SSKA14_3977 SSKA14_3977
SC S9 unassigned family S9 unassigned peptidases MER0215019
SC S10 unassigned family S10 unassigned peptidases MER0490494
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1022534 SSKA14_1616
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1023077 gaa
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1021559 SSKA14_4200
SC S15 unassigned family S15 unassigned peptidases MER1021997 SSKA14_2325
SC S33 S33.001 prolyl aminopeptidase MER0177079 pip_2 SSKA14_2174
SC S33 S33.001 prolyl aminopeptidase MER0177680 pip_1 SSKA14_2703
SC S33 S33.010 SCO7095-type peptidase MER0211587
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0214559
SC S33 unassigned family S33 unassigned peptidases MER0214575
SC S33 unassigned family S33 unassigned peptidases MER0209059
SC S33 unassigned family S33 unassigned peptidases MER0215487
SE S11 unassigned family S11 unassigned peptidases MER0947816 SSKA14_466
SE S11 unassigned family S11 unassigned peptidases MER0170700 dacC SSKA14_451
SE S11 unassigned family S11 unassigned peptidases MER0171595 SSKA14_1637
SE S12 S12.950 esterase EstB MER0177791 SSKA14_3088
SE S12 S12.A21 pbpX g.p. (Bacillus subtilis) MER0177315 SSKA14_2265
SE S12 unassigned family S12 unassigned peptidases MER1006274 SSKA14_825
SE S12 unassigned family S12 unassigned peptidases MER1028075 SSKA14_2939
SE S12 unassigned family S12 unassigned peptidases MER1004975 SSKA14_2188
SE S12 unassigned family S12 unassigned peptidases MER0177006 SSKA14_798
SE S12 unassigned family S12 unassigned peptidases MER0171324 SSKA14_1099
SE S12 unassigned family S12 unassigned peptidases MER0171495 SSKA14_1450
SE S12 unassigned family S12 unassigned peptidases MER0171522 SSKA14_1528
SE S12 unassigned family S12 unassigned peptidases MER0177575 SSKA14_2649
SE S12 unassigned family S12 unassigned peptidases MER0177768 SSKA14_2817
SE S12 unassigned family S12 unassigned peptidases MER0177935 SSKA14_3243
SE S12 unassigned family S12 unassigned peptidases MER0177798 SSKA14_3112
SE S12 unassigned family S12 unassigned peptidases MER0178286 SSKA14_3740
SF S24 S24.001 repressor LexA MER0178081 lexA SSKA14_3412
SF S24 S24.003 UmuD protein MER0170765 umuD SSKA14_525
SF S26 S26.001 signal peptidase I MER0177785 lepB_2 SSKA14_3046
SF S26 S26.026 PA1303 peptidase (Pseudomonas sp.) MER0170985 lepB_1 SSKA14_669
SH S78 S78.001 prohead peptidase (bacteriophage HK97) MER0171992 SSKA14_1972
SJ S16 S16.001 Lon-A peptidase MER0171104 lon SSKA14_696
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1035214 radA
SK S14 S14.001 peptidase Clp (type 1) MER0178508 clpP SSKA14_4170
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER1016754 SSKA14_2310
SK S41 S41.001 C-terminal processing peptidase-1 MER0177900 SSKA14_3210
SK S41 S41.004 C-terminal processing peptidase-3 MER0171895 prc SSKA14_1850
SK S41 non-peptidase homologue subfamily S41A non-peptidase homologues MER0178008 SSKA14_3316
SK S49 S49.001 signal peptide peptidase A (Pseudomonas aeruginosa) MER0177336 sppA SSKA14_2320
SK S49 S49.003 protein C (bacteriophage lambda) MER0232577 SSKA14_544
SK S49 non-peptidase homologue subfamily S49B non-peptidase homologues MER1071091 SSKA14_2310
SK S49 unassigned subfamily S49B unassigned peptidases MER0177337 sppA SSKA14_2320
SK S49 unassigned subfamily S49B unassigned peptidases MER1354252
ST S54 S54.025 At5g25752 rhomboid peptidase MER0177806 SSKA14_3150
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0170528 SSKA14_48
ST S54 unassigned family S54 unassigned peptidases MER1083005 SSKA14_3985
ST S54 unassigned family S54 unassigned peptidases MER1083931 SSKA14_3877

GENOME ANALYSIS: Comparison with 40 completely sequenced genomes from family Xanthomonadaceae
Family Comment
A39 significant presence (1 homologues)
C59 significant presence (1 homologues)
S16 significant decrease in homologues (2 homologues)
S51 significant presence (1 homologues)
S78 significant presence (1 homologues)