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Rhodothermus marinus

Taxonomy
Taxonomy database identifier: 29549
Superkingdom Bacteria
Phylum Bacteroidetes
Species marinus
Genus Rhodothermus
Class Sphingobacteria
Order Sphingobacteriales
Peptidase View peptidase sequences from Rhodothermus marinus
Count of known and putative peptidases: 143, non-peptidase homologues 80
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0130612 lspA Rmar_2046
AE A31 unassigned family A31 unassigned peptidases MER0130574 Rmar_2591
CD C25 unassigned family C25 unassigned peptidases MER0130517 Rmar_0953
CL C82 unassigned subfamily C82A unassigned peptidases MER0187450 Rmar_0389
CL C82 unassigned subfamily C82A unassigned peptidases MER0187458 Rmar_0610
CL C82 unassigned subfamily C82A unassigned peptidases MER0130533 Rmar_0611
CL C82 unassigned subfamily C82A unassigned peptidases MER0130615 Rmar_2040
CO C40 C40.004 spr peptidase MER0130668 Rmar_1118
G- G5 G05.A04 At3g26085 (Arabidopsis thaliana) MER0130516 Rmar_0959
G- G5 unassigned family G5 unassigned peptidases MER0130575 Rmar_2569
MA M1 unassigned family M1 unassigned peptidases MER0130540 Rmar_0387
MA M1 unassigned family M1 unassigned peptidases MER0130538 Rmar_0395
MA M1 unassigned family M1 unassigned peptidases MER0130521 Rmar_0899
MA M1 unassigned family M1 unassigned peptidases MER0130627 Rmar_1830
MA M1 unassigned family M1 unassigned peptidases MER0130616 Rmar_2032
MA M3 unassigned subfamily M3B unassigned peptidases MER0130621 Rmar_1896
MA M4 non-peptidase homologue family M4 non-peptidase homologues MER0130569 Rmar_2687
MA M30 non-peptidase homologue family M30 non-peptidase homologues MER1259400
MA M30 unassigned family M30 unassigned peptidases MER0130553 Rhom172_0183
MA M32 unassigned family M32 unassigned peptidases MER0130652 Rmar_1392
MA M41 M41.007 Afg3-like protein 2 MER0130523 ftsH Rmar_0836
MA M48 unassigned subfamily M48B unassigned peptidases MER0130629 htpX Rmar_1819
MA M48 unassigned subfamily M48C unassigned peptidases MER0130565 Rmar_2749
MA M56 unassigned family M56 unassigned peptidases MER0130571 Rmar_2640
MA M72 unassigned family M72 unassigned peptidases MER0130557 Rmar_0099
MA M72 unassigned family M72 unassigned peptidases MER0130610 Rmar_2053
MA M72 unassigned family M72 unassigned peptidases MER0273755 Rhom172_0097
MA M90 unassigned family M90 unassigned peptidases MER0286993 Rhom172_0644
MC M14 non-peptidase homologue subfamily M14A non-peptidase homologues MER0469198 Rmar_1725
MC M14 non-peptidase homologue subfamily M14B non-peptidase homologues MER0187540 Rmar_1907
MC M14 non-peptidase homologue subfamily M14B non-peptidase homologues MER0130620
MC M14 non-peptidase homologue subfamily M14B non-peptidase homologues MER0469322 Rmar_0876
MC M14 non-peptidase homologue subfamily M14B non-peptidase homologues MER0469356 Rhom172_0263
MC M14 non-peptidase homologue subfamily M14B non-peptidase homologues MER0469309 Rhom172_2397
MC M14 non-peptidase homologue subfamily M14B non-peptidase homologues MER0469401 Rhom172_2482
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0130560 Rmar_0074
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0130669 Rmar_1110
ME M16 M16.A15 BSSC8_26020 g.p. (Bacillus subtilis) MER0130659 Rhom172_1358
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0130559 Rmar_0089
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0130657 Rmar_1347
ME M16 unassigned subfamily M16B unassigned peptidases MER0130558 Rmar_0089
ME M16 unassigned subfamily M16B unassigned peptidases MER0130656 Rmar_1348
MF M17 unassigned family M17 unassigned peptidases MER0130636 pepA Rmar_1710
MG M24 M24.031 leucine aminopeptidase (Thermotoga-type) MER0130658 Rmar_1321
MG M24 unassigned subfamily M24A unassigned peptidases MER0130522 Rmar_0863
MG M24 unassigned subfamily M24B unassigned peptidases MER0130622 Rmar_1893
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0130543 Rmar_0345
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0474468 Rhom172_0341
MH M20 unassigned subfamily M20A unassigned peptidases MER0130512 Rmar_1037
MH M20 unassigned subfamily M20A unassigned peptidases MER0130640 Rmar_1622
MH M20 unassigned family M20D unassigned peptidases MER0130536 Rmar_0545
MH M20 unassigned subfamily M20F unassigned peptidases MER0130599 Rmar_2132
MH M20 unassigned family M20 unassigned peptidases MER0130542 Rmar_0377
MH M28 non-peptidase homologue subfamily M28E non-peptidase homologues MER0128684 Rmar_1065
MH M28 unassigned subfamily M28B unassigned peptidases MER0130535 Rmar_0546
MH M28 unassigned subfamily M28B unassigned peptidases MER0130608 Rmar_2092
MH M28 unassigned subfamily M28D unassigned peptidases MER0130520 Rmar_0906
MH M28 unassigned subfamily M28D unassigned peptidases MER0130651 Rhom172_1475
MH M28 unassigned subfamily M28E unassigned peptidases MER0130579 Rmar_2521
MH M28 unassigned subfamily M28E unassigned peptidases MER1249044
MH M28 unassigned subfamily M28E unassigned peptidases MER1249393
MH M42 unassigned family M42 unassigned peptidases MER0130526 Rmar_0820
MJ M19 unassigned family M19 unassigned peptidases MER0130546 Rmar_0331
MJ M19 unassigned family M19 unassigned peptidases MER0130525 Rhom172_2055
MJ M19 unassigned family M19 unassigned peptidases MER1194603
MJ M19 unassigned family M19 unassigned peptidases MER1195772
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0130513 Rmar_0997
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0130654 Rmar_1358
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0130650 Rmar_1420
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0130649 Rmar_1421
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0130606 Rmar_2104
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0130605 Rmar_2105
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0130604 Rmar_2106
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0187574 Rmar_2366
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0130566 Rmar_2719
MJ M38 unassigned family M38 unassigned peptidases MER0130643 hutI Rmar_1595
MJ M38 unassigned family M38 unassigned peptidases MER0130607 Rmar_2093
MM M50 unassigned subfamily M50B unassigned peptidases MER0130552 Rmar_0258
MM M50 unassigned subfamily M50B unassigned peptidases MER0130524 Rmar_0832
MM M50 unassigned family M50 unassigned peptidases MER0130619 Rmar_1961
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0130642 Rhom172_1194
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0389563
MO M23 non-peptidase homologue family M23 non-peptidase homologues MER0130618 Rhom172_0893
MO M23 unassigned subfamily M23B unassigned peptidases MER0130548 Rhom172_0288
MO M23 unassigned subfamily M23B unassigned peptidases MER0130577 Rmar_2553
MP M67 unassigned subfamily M67B unassigned peptidases MER0130638 Rmar_1678
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0273761 Rhom172_2120
PA S1 S01.453 MucD peptidase MER0130626 Rmar_1850
PA S1 unassigned subfamily S1C unassigned peptidases MER0130570 Rhom172_2699
PA S1 unassigned subfamily S1C unassigned peptidases MER0130527 Rmar_0747 Rmar_0747
PA S1 unassigned subfamily S1C unassigned peptidases MER0903854 Rhom172_2134
PA S1 unassigned subfamily S1C unassigned peptidases MER0273760 Rhom172_2134
PA S46 unassigned family S46 unassigned peptidases MER0130667 Rmar_1178
PA S46 unassigned family S46 unassigned peptidases MER0130666 Rmar_1179
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0130602 Rmar_2109
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0458416 Rhom172_2385
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0130662 Rmar_1260
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0130534 Rmar_0598
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0130515 Rmar_0967
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0130588 Rmar_2386
PB T1 unassigned subfamily T1B unassigned peptidases MER0130623 hslV Rmar_1877
PB T2 T02.007 Chryseobacterium meningosepticum-type N4-(beta-N-acetylglucosaminyl)-L-asparaginase MER0187502 Rmar_1344
PB T2 unassigned family T2 unassigned peptidases MER0130641 Rmar_1612
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0130603 Rmar_2108
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0130578 Rmar_2546
PC C26 C26.952 dihydro-orotase (N-terminal unit) (Homo sapiens-type) MER0130617 carA Rmar_2002
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0128460 Rmar_1045
PC C26 C26.957 GMP synthase MER0130529 guaA Rmar_0677
PC C26 C26.964 CTP synthetase MER0130567 pyrG Rmar_2712
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0130645 hisH Rmar_1571
PC C26 unassigned family C26 unassigned peptidases MER0130653 Rmar_1367
PC C26 unassigned family C26 unassigned peptidases MER0130647 Rmar_1509
PC C26 unassigned family C26 unassigned peptidases MER0130563 Rmar_2798
PC C26 unassigned family C26 unassigned peptidases MER0273766 Rhom172_1421
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0130545 Rmar_0332
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0130593 Rmar_2306
PC C56 unassigned family C56 unassigned peptidases MER0130556 Rmar_0116
PD N10 N10.002 intein-containing replicative DNA helicase precursor MER0180708 dnaB Rmar_0015
PD N10 N10.002 intein-containing replicative DNA helicase precursor MER0300263 Rhom172_0015
PD N10 unassigned family N10 unassigned peptide lyases MER0178443 Rmar_0504
PD N10 unassigned family N10 unassigned peptide lyases MER0224295 Rmar_1917
PD N10 unassigned family N10 unassigned peptide lyases MER0178415 Rmar_2540
PE P1 unassigned family P01 unassigned peptidases MER0130585 Rmar_2417
SB S8 unassigned subfamily S8B unassigned peptidases MER0130528 Rmar_0744
SC S9 S09.013 dipeptidyl-peptidase 4 (bacteria-type 2) MER0130514 Rmar_0996
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0130591 Rmar_2310
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0130572 Rmar_2600
SC S9 unassigned subfamily S9A unassigned peptidases MER0273758 Rhom172_0664
SC S9 unassigned subfamily S9B unassigned peptidases MER0130547 Rhom172_0310
SC S9 unassigned subfamily S9C unassigned peptidases MER0130611 Rmar_2049
SC S9 unassigned subfamily S9C unassigned peptidases MER0130576 Rmar_2568
SC S9 unassigned subfamily S9C unassigned peptidases MER1116537
SC S9 unassigned family S9 unassigned peptidases MER0130551 Rmar_0272
SC S9 unassigned family S9 unassigned peptidases MER0130537 Rmar_0409
SC S9 unassigned family S9 unassigned peptidases MER0130665 Rhom172_1628
SC S9 unassigned family S9 unassigned peptidases MER0130664 Rmar_1206
SC S9 unassigned family S9 unassigned peptidases MER0187580 Rmar_2468
SC S9 unassigned family S9 unassigned peptidases MER0130583
SC S10 unassigned family S10 unassigned peptidases MER0130555 Rmar_0118
SC S33 unassigned family S33 unassigned peptidases MER0130541 Rmar_0379
SC S33 unassigned family S33 unassigned peptidases MER0130518 metX Rmar_0930
SC S33 unassigned family S33 unassigned peptidases MER0130648 Rmar_1465
SC S33 unassigned family S33 unassigned peptidases MER0130584 Rmar_2446
SC S33 unassigned family S33 unassigned peptidases MER0130582 Rmar_2481
SC S33 unassigned family S33 unassigned peptidases MER0130580 Rmar_2510
SC S33 unassigned family S33 unassigned peptidases MER0273765 Rhom172_1522
SC S33 unassigned family S33 unassigned peptidases MER0273759 Rhom172_2520
SE S11 unassigned family S11 unassigned peptidases MER0130670
SE S12 unassigned family S12 unassigned peptidases MER0130655 Rmar_1357
SE S12 unassigned family S12 unassigned peptidases MER0130519 Rmar_0925
SE S13 S13.002 D-Ala-D-Ala carboxypeptidase (Actinomadura-type) MER0130624 Rmar_1876
SE S13 S13.002 D-Ala-D-Ala carboxypeptidase (Actinomadura-type) MER0130597 Rmar_2219
SF S24 S24.003 UmuD protein MER0273767 Rhom172_2841
SF S24 non-peptidase homologue family S24 non-peptidase homologues MER0130568 Rmar_2710
SF S26 unassigned subfamily S26A unassigned peptidases MER0130614 Rmar_2042
SF S26 unassigned subfamily S26A unassigned peptidases MER0130613 Rmar_2043
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0130589 Rmar_2341
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0130646 Rmar_1523
SJ S16 unassigned family S16 unassigned peptidases MER0130637 lon Rhom172_1088
SK S14 S14.001 peptidase Clp (type 1) MER0130586 clpP Rmar_2407
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0273768
SK S41 unassigned subfamily S41A unassigned peptidases MER0130554 Rmar_0124
SK S41 unassigned subfamily S41A unassigned peptidases MER0130635 Rmar_1722
SK S41 unassigned subfamily S41A unassigned peptidases MER0130628 Rmar_1823
SK S41 unassigned subfamily S41B unassigned peptidases MER0130590 Rmar_2310
SK S49 unassigned subfamily S49B unassigned peptidases MER0130562 Rmar_0017
SK S49 unassigned subfamily S49B unassigned peptidases MER0130661 Rmar_1299
SK S49 unassigned subfamily S49B unassigned peptidases MER0130600 Rmar_2128
SK S49 unassigned subfamily S49B unassigned peptidases MER0130539 Rmar_0391
SS S66 S66.001 murein tetrapeptidase LD-carboxypeptidase (Pseudomonas-type) MER0130625 Rmar_1871
ST S54 S54.025 At5g25752 rhomboid peptidase MER0130550 Rmar_0276
ST S54 S54.025 At5g25752 rhomboid peptidase MER0130549 Rmar_0277
ST S54 S54.025 At5g25752 rhomboid peptidase MER0130594 Rmar_2304
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0130660 Rmar_1300
U- U69 unassigned family U69 unassigned peptidases MER0273756 Rhom172_0530
U- U69 unassigned family U69 unassigned peptidases MER0273757 Rhom172_0530

GENOME ANALYSIS: Comparison with 35 completely sequenced genomes from order Sphingobacteriales
Family Comment
C44 lineage specific expansion (6 homologues)
C82 lineage specific expansion (4 homologues)
M4 significant presence (1 homologues)
M17 significant presence (1 homologues)
M30 significant presence (2 homologues)
M32 significant presence (1 homologues)
M67 significant presence (1 homologues)
M72 significant presence (3 homologues)
N6 significant presence (1 homologues)
N10 significant presence (5 homologues)
S8 significant decrease in homologues (1 homologues)
S12 significant decrease in homologues (2 homologues)
S49 lineage specific expansion (4 homologues)
U69 significant presence (2 homologues)

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Page created 8-September-2023

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