Methylobacterium radiotolerans

Taxonomy
Taxonomy database identifier: 31998
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Rhizobiales
Genus Methylobacterium
Species radiotolerans
Family Methylobacteriaceae
Peptidase View peptidase sequences from Methylobacterium radiotolerans
Count of known and putative peptidases: 146, non-peptidase homologues 69
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 A32.001 PerP peptidase (Caulobacter sp.) MER0241715 Mrad2831_0576
AA A32 A32.001 PerP peptidase (Caulobacter sp.) MER0241858 Mrad2831_1975
AC A8 unassigned family A8 unassigned peptidases MER0099244 lspA Mrad2831_1799
AD A24 unassigned subfamily A24A unassigned peptidases MER0098010 Mrad2831_3494
CA C39 C39.005 colicin V processing peptidase MER0095316 Mrad2831_4874
CA C39 C39.005 colicin V processing peptidase MER0124253 Mrad2831_6118
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0716513 Mrad2831_6494
CA C93 unassigned family C93 unassigned peptidases MER0391694 Mrad2831_3777
CD C14 unassigned subfamily C14B unassigned peptidases MER0098596 Mrad2831_3027
CL C60 unassigned subfamily C60A unassigned peptidases MER0093934 Mrad2831_5162
CL C82 C82.003 ykuD transpeptidase MER0099330 Mrad2831_1023
CL C82 C82.003 ykuD transpeptidase MER0098844 Mrad2831_2752
CL C82 C82.003 ykuD transpeptidase MER0097661 Mrad2831_3901
CL C82 C82.003 ykuD transpeptidase MER0095473 Mrad2831_4470
CL C82 C82.003 ykuD transpeptidase MER0095323 Mrad2831_4771
CL C82 C82.003 ykuD transpeptidase MER0094816 Mrad2831_5015
CL C82 C82.003 ykuD transpeptidase MER0093552 Mrad2831_5407
CL C82 C82.003 ykuD transpeptidase MER0093353 Mrad2831_5602
CL C82 unassigned subfamily C82A unassigned peptidases MER0099319 Mrad2831_1083
CL C82 unassigned subfamily C82A unassigned peptidases MER0098724 Mrad2831_2917
CL C82 unassigned subfamily C82A unassigned peptidases MER0098676 Mrad2831_2936
CL C82 unassigned subfamily C82A unassigned peptidases MER0243906 Mrad2831_1046
CL C82 unassigned subfamily C82A unassigned peptidases MER0243952 Mrad2831_1859
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0096321 Mrad2831_4311
CO C40 unassigned family C40 unassigned peptidases MER0096549 Mrad2831_4018
CO C40 unassigned family C40 unassigned peptidases MER0095307 Mrad2831_4979
G- G5 unassigned family G5 unassigned peptidases MER0938518 Mrad2831_4524
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0098927 Mrad2831_2368
MA M3 unassigned subfamily M3A unassigned peptidases MER0098693 Mrad2831_2934
MA M3 unassigned subfamily M3B unassigned peptidases MER0098838 Mrad2831_2803
MA M106 M106.UPW family M106 unassigned peptidases MER1382141
MA M32 unassigned family M32 unassigned peptidases MER0099409 Mrad2831_0724
MA M41 unassigned family M41 unassigned peptidases MER0095954 ftsH Mrad2831_4335
MA M41 unassigned family M41 unassigned peptidases MER0095401 Mrad2831_4675
MA M48 unassigned subfamily M48C unassigned peptidases MER0098277 Mrad2831_3237
MA M48 unassigned subfamily M48C unassigned peptidases MER0095460 Mrad2831_4490
MD M15 non-peptidase homologue family M15 non-peptidase homologues MER0098818 Mrad2831_2806
MD M74 unassigned family M74 unassigned peptidases MER0095459 Mrad2831_4516
ME M16 M16.019 YMXG peptidase MER0099243 Mrad2831_1801
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0099223 Mrad2831_1802
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0099242 Mrad2831_1802
ME M16 unassigned subfamily M16B unassigned peptidases MER0099265 Mrad2831_1589
MF M17 unassigned family M17 unassigned peptidases MER0097972 Mrad2831_3582
MF M17 unassigned family M17 unassigned peptidases MER0099418 pepA Mrad2831_0557
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0099415 Mrad2831_0586
MG M24 M24.009 aminopeptidase P1 MER0098930 Mrad2831_2337
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0483302 Mrad2831_5807
MG M24 unassigned subfamily M24A unassigned peptidases MER0098316 Mrad2831_3189
MH M20 non-peptidase homologue subfamily M20A non-peptidase homologues MER0123795 Mrad2831_6159
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0095446 Mrad2831_4578
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0098590 Mrad2831_3071
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0095485 Mrad2831_4391
MH M20 unassigned subfamily M20A unassigned peptidases MER0099320 Mrad2831_1080
MH M20 unassigned subfamily M20A unassigned peptidases MER0098999 Mrad2831_2313
MH M20 unassigned subfamily M20A unassigned peptidases MER0098898 Mrad2831_2417
MH M20 unassigned subfamily M20A unassigned peptidases MER0098879 Mrad2831_2432
MH M20 unassigned subfamily M20A unassigned peptidases MER1219534
MH M20 unassigned subfamily M20A unassigned peptidases MER0099400 Mrad2831_0896
MH M20 unassigned subfamily M20A unassigned peptidases MER0098388 dapE Mrad2831_3149
MH M20 unassigned family M20D unassigned peptidases MER0098989 Mrad2831_2323
MH M20 unassigned family M20D unassigned peptidases MER0097935 Mrad2831_3584
MH M20 unassigned family M20D unassigned peptidases MER0095318 Mrad2831_4829
MH M20 unassigned subfamily M20F unassigned peptidases MER0095465 Mrad2831_4483
MH M20 unassigned family M20 unassigned peptidases MER0099270 Mrad2831_1548
MH M20 unassigned family M20 unassigned peptidases MER0095493 Mrad2831_4378
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0138166 Mrad2831_6399
MJ M38 M38.982 urease MER0098785 ureC1 Mrad2831_2864
MJ M38 M38.982 urease MER0866937 ureC
MJ M38 M38.A02 PyrC protein (Escherichia coli) MER0093680 pyrC Mrad2831_5321
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0099423 Mrad2831_0472
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0099422 Mrad2831_0525
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0098787 ade Mrad2831_2849
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0097708 Mrad2831_3850
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0097034 Mrad2831_3941
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0096546 Mrad2831_4051
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0096543 Mrad2831_4071
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0095508 Mrad2831_4371
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0095319 Mrad2831_4824
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0094018 Mrad2831_5153
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0869690 Mrad2831_5828
MM M50 unassigned subfamily M50B unassigned peptidases MER0098090 Mrad2831_3440
MN M55 unassigned family M55 unassigned peptidases MER0098251 Mrad2831_3239
MO M23 M23.009 Mername-AA292 peptidase MER0099433 Mrad2831_0280
MO M23 M23.009 Mername-AA292 peptidase MER0099222 Mrad2831_1809
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0099039 Mrad2831_2270
MO M23 non-peptidase homologue family M23 non-peptidase homologues MER0099468 Mrad2831_0099
MO M23 unassigned subfamily M23B unassigned peptidases MER0098918 Mrad2831_2390
MT M81 unassigned family M81 unassigned peptidases MER0223163 Mrad2831_0897
MT M81 unassigned family M81 unassigned peptidases MER0223164 Mrad2831_3062
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405860 flhB Mrad2831_1716
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405779 Mrad2831_2230
PA S1 non-peptidase homologue subfamily S1C non-peptidase homologues MER0967266 Mrad2831_1570
PA S1 unassigned subfamily S1A unassigned peptidases MER0095309 Mrad2831_4967
PA S1 unassigned subfamily S1A unassigned peptidases MER0095308 Mrad2831_4968
PA S1 unassigned subfamily S1A unassigned peptidases MER0093380 Mrad2831_5572
PA S1 unassigned subfamily S1C unassigned peptidases MER0099405 Mrad2831_0793
PA S1 unassigned subfamily S1C unassigned peptidases MER0099282 Mrad2831_1518
PA S1 unassigned subfamily S1C unassigned peptidases MER0095458 Mrad2831_4529
PA S1 unassigned subfamily S1C unassigned peptidases MER0093529 Mrad2831_5428 Mrad2831_5428
PA S1 unassigned subfamily S1C unassigned peptidases MER1272264
PA S1 unassigned family S1 unassigned peptidases MER0098592 Mrad2831_3032
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0098318 Mrad2831_3188
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0097705 Mrad2831_3894
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0099481 Mrad2831_0036
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0098880 Mrad2831_2418
PB C44 unassigned family C44 unassigned peptidases MER0099329 Mrad2831_1034
PB C44 unassigned family C44 unassigned peptidases MER0098321 Mrad2831_3187
PB C44 unassigned family C44 unassigned peptidases MER0095321 Mrad2831_4810
PB C44 unassigned family C44 unassigned peptidases MER0093381 Mrad2831_5534
PB S45 S45.003 cephalosporin C acylase precursor MER0099399 Mrad2831_0898
PB T1 T01.006 HslV component of HslUV peptidase MER0098568 hslV Mrad2831_3080
PB T1 unassigned family T1 unassigned peptidases MER0099416 Mrad2831_0581
PB T2 unassigned family T2 unassigned peptidases MER0098233 Mrad2831_3245
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0099272 Mrad2831_1522
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0094469 Mrad2831_5078
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0099467 Mrad2831_0119
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0099401 Mrad2831_0869
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0099264 Mrad2831_1637
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0098446 Mrad2831_3101
PC C26 C26.957 GMP synthase MER0099425 guaA Mrad2831_0451
PC C26 C26.964 CTP synthetase MER0098412 pyrG Mrad2831_3107
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0099424 Mrad2831_0469
PC C26 unassigned family C26 unassigned peptidases MER0099193 Mrad2831_1831
PC C26 unassigned family C26 unassigned peptidases MER0094596 Mrad2831_5032
PC C26 unassigned family C26 unassigned peptidases MER0441508 carA Mrad2831_0570
PC C56 C56.001 PfpI peptidase MER0093743 Mrad2831_5287
PC C56 C56.001 PfpI peptidase MER0093565 Mrad2831_5375
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0099263 Mrad2831_1652
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0099262 Mrad2831_1653
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0098877 Mrad2831_2488
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0098228 Mrad2831_3312
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0098094 Mrad2831_3391
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0097095 Mrad2831_3940
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0095751 Mrad2831_4360
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0095483 Mrad2831_4441
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0095331 Mrad2831_4719
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0167243 Mrad2831_5801
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0170564 Mrad2831_6432
PC S51 unassigned family S51 unassigned peptidases MER1356957
PE P1 P01.101 pantetheinyl hydrolase ThnT precursor MER0099093 Mrad2831_2156
PE P1 unassigned family P01 unassigned peptidases MER0098236 Mrad2831_3240
PE T5 T05.001 ornithine acetyltransferase precursor MER0095312 argJ Mrad2831_4942
SB S8 non-peptidase homologue subfamily S8B non-peptidase homologues MER0975303 Mrad2831_6125
SB S8 unassigned subfamily S8A unassigned peptidases MER0096540 Mrad2831_4232
SC S9 S09.010 oligopeptidase B MER0095311 Mrad2831_4953
SC S9 S09.951 brefeldin A esterase MER0099420 Mrad2831_0540
SC S9 S09.A77 dpf-6 g.p. (Caenorhabditis elegans) MER0095322 Mrad2831_4772
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0099463 Mrad2831_0189
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0099464 Mrad2831_0189
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0099269 Mrad2831_1550
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0098874 Mrad2831_2733
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0096348 Mrad2831_4281
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0093509 Mrad2831_5450
SC S9 unassigned subfamily S9A unassigned peptidases MER0124128 Mrad2831_5937
SC S9 unassigned subfamily S9C unassigned peptidases MER0099453 Mrad2831_0260
SC S9 unassigned subfamily S9C unassigned peptidases MER0099411 Mrad2831_0692
SC S9 unassigned subfamily S9C unassigned peptidases MER0099403 Mrad2831_0843
SC S9 unassigned subfamily S9C unassigned peptidases MER0098331 Mrad2831_3184
SC S9 unassigned subfamily S9C unassigned peptidases MER0095314 Mrad2831_4934
SC S9 unassigned subfamily S9C unassigned peptidases MER0093367 Mrad2831_5584
SC S9 unassigned family S9 unassigned peptidases MER0099475 Mrad2831_0088
SC S9 unassigned family S9 unassigned peptidases MER0099454 Mrad2831_0191
SC S9 unassigned family S9 unassigned peptidases MER0099404 Mrad2831_0811
SC S9 unassigned family S9 unassigned peptidases MER0099271 Mrad2831_1536
SC S9 unassigned family S9 unassigned peptidases MER0098386 Mrad2831_3160
SC S9 unassigned family S9 unassigned peptidases MER0095456 Mrad2831_4564
SC S10 unassigned family S10 unassigned peptidases MER0098408 Mrad2831_3109
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1025632 Mrad2831_0692
SC S33 S33.010 SCO7095-type peptidase MER0099410 Mrad2831_0705
SC S33 S33.B15 PF3D7_1410100 g.p. (Plasmodium falciparum) MER0093761 Mrad2831_5284
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0099414 Mrad2831_0619
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0099266 rutD Mrad2831_1581
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0099255 Mrad2831_1661
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0099000 Mrad2831_2274
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0096541 Mrad2831_4102
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0095449 Mrad2831_4572
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0095400 Mrad2831_4681
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0095325 Mrad2831_4769
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0210307 Mrad2831_2400
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0213283 Mrad2831_6184
SC S33 unassigned family S33 unassigned peptidases MER0099480 Mrad2831_0065
SC S33 unassigned family S33 unassigned peptidases MER0099466 Mrad2831_0129
SC S33 unassigned family S33 unassigned peptidases MER0099412 Mrad2831_0665
SC S33 unassigned family S33 unassigned peptidases MER0099402 Mrad2831_0856
SC S33 unassigned family S33 unassigned peptidases MER0099397 Mrad2831_0978
SC S33 unassigned family S33 unassigned peptidases MER0099317 Mrad2831_1114
SC S33 unassigned family S33 unassigned peptidases MER0099189 Mrad2831_1832
SC S33 unassigned family S33 unassigned peptidases MER0099188 metX Mrad2831_1879
SC S33 unassigned family S33 unassigned peptidases MER0098773 Mrad2831_2882
SC S33 unassigned family S33 unassigned peptidases MER0098201 Mrad2831_3372
SC S33 unassigned family S33 unassigned peptidases MER0097933 Mrad2831_3606
SC S33 unassigned family S33 unassigned peptidases MER0096545 Mrad2831_4056
SC S33 unassigned family S33 unassigned peptidases MER0095385 Mrad2831_4708
SC S33 unassigned family S33 unassigned peptidases MER0095361 Mrad2831_4716
SC S33 unassigned family S33 unassigned peptidases MER0095330 Mrad2831_4720
SC S33 unassigned family S33 unassigned peptidases MER0095329 Mrad2831_4734
SC S33 unassigned family S33 unassigned peptidases MER0095315 Mrad2831_4878
SC S33 unassigned family S33 unassigned peptidases MER0095313 Mrad2831_4936
SC S33 unassigned family S33 unassigned peptidases MER0094166 Mrad2831_5140
SC S33 unassigned family S33 unassigned peptidases MER0093474 Mrad2831_5507
SE S11 unassigned family S11 unassigned peptidases MER0099407 Mrad2831_0790
SE S11 unassigned family S11 unassigned peptidases MER0099286 Mrad2831_1507
SE S11 unassigned family S11 unassigned peptidases MER0098919 Mrad2831_2383
SE S11 unassigned family S11 unassigned peptidases MER0096542 Mrad2831_4082
SE S12 S12.006 class C beta-lactamase MER0093720 Mrad2831_5292
SE S12 S12.950 esterase EstB MER0093503 Mrad2831_5491
SE S12 unassigned family S12 unassigned peptidases MER0099254 Mrad2831_1669
SE S12 unassigned family S12 unassigned peptidases MER0098900 Mrad2831_2416
SF S24 S24.001 repressor LexA MER0099152 lexA Mrad2831_2020
SF S24 S24.003 UmuD protein MER0123407 Mrad2831_6256
SF S24 unassigned family S24 unassigned peptidases MER0099419 Mrad2831_0549
SF S24 unassigned family S24 unassigned peptidases MER1330649
SF S26 S26.001 signal peptidase I MER0098082 Mrad2831_3456
SH S78 S78.001 prohead peptidase (bacteriophage HK97) MER0095310 Mrad2831_4964
SJ S16 S16.001 Lon-A peptidase MER0094249 Mrad2831_5136
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0097679 Mrad2831_3897
SK S14 S14.001 peptidase Clp (type 1) MER0094250 clpP Mrad2831_5134
SK S41 unassigned subfamily S41A unassigned peptidases MER0099474 Mrad2831_0098
SK S41 unassigned subfamily S41A unassigned peptidases MER0099426 Mrad2831_0414
SK S49 S49.003 protein C (bacteriophage lambda) MER0125617 Mrad2831_6530
SK S49 unassigned subfamily S49B unassigned peptidases MER0099140 Mrad2831_2153
SK S49 unassigned subfamily S49B unassigned peptidases MER0098878 Mrad2831_2445
SK S49 unassigned subfamily S49B unassigned peptidases MER1354085
SS S66 S66.001 murein tetrapeptidase LD-carboxypeptidase (Pseudomonas-type) MER0126618 Mrad2831_6400
ST S54 unassigned family S54 unassigned peptidases MER0095426 Mrad2831_4634

GENOME ANALYSIS: Comparison with 14 completely sequenced genomes from family Methylobacteriaceae
Family Comment
C56 lineage specific expansion (13 homologues)
C93 significant presence (1 homologues)
M106 significant presence (1 homologues)
M19 significant presence (1 homologues)
M20 lineage specific expansion (17 homologues)
M24 lineage specific expansion (4 homologues)
M55 significant presence (1 homologues)
S33 lineage specific expansion (32 homologues)
S51 significant presence (1 homologues)
S66 significant presence (1 homologues)
T2 significant presence (1 homologues)