Clostridium phytofermentans

Taxonomy
Taxonomy database identifier: 66219
Superkingdom Bacteria
Phylum Firmicutes
Class Clostridia
Order Clostridiales
Family Clostridiaceae
Genus Clostridium
Species phytofermentans
Peptidase View peptidase sequences from Clostridium phytofermentans
Count of known and putative peptidases: 79, non-peptidase homologues 25
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
A- A36 unassigned family A36 unassigned peptidases MER0123845 Cphy_2470
AC A8 unassigned family A8 unassigned peptidases MER0433745 Cphy_3808
AC A8 unassigned family A8 unassigned peptidases MER0085209 Cphy_0324
AC A8 unassigned family A8 unassigned peptidases MER0085176 lspA Cphy_2357
AD A24 A24.019 ComC peptidase MER0085224 Cphy_2819
AD A24 unassigned subfamily A24B unassigned peptidases MER0085216
AE A25 A25.001 gpr peptidase MER0085174 gpr Cphy_2317
CD C11 non-peptidase homologue family C11 non-peptidase homologues MER0346305 Cphy_2808
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0085197 Cphy_2057
CL C60 unassigned subfamily C60B unassigned peptidases MER0118866 Cphy_0567
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0718288 Cphy_1440
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0119101 Cphy_2003
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0161930 Cphy_1886
CO C40 unassigned family C40 unassigned peptidases MER0118037 Cphy_0724
CO C40 unassigned family C40 unassigned peptidases MER0453020 Cphy_2384
G- G5 unassigned family G5 unassigned peptidases MER0936152 Cphy_0673
G- G5 unassigned family G5 unassigned peptidases MER0935198 Cphy_3228
G- G5 unassigned family G5 unassigned peptidases MER0935922 Cphy_0252
MA M1 unassigned family M1 unassigned peptidases MER0085183
MA M3 unassigned subfamily M3B unassigned peptidases MER0126689 Cphy_3699
MA M3 unassigned subfamily M3B unassigned peptidases MER0085204 Cphy_3298
MA M26 non-peptidase homologue family M26 non-peptidase homologues MER0293155 Cphy_1995
MA M32 unassigned family M32 unassigned peptidases MER0085214 Cphy_0759
MA M41 unassigned family M41 unassigned peptidases MER0081430 ftsH Cphy_2049
MA M41 unassigned family M41 unassigned peptidases MER0081429 ftsH1 Cphy_0141
MA M41 unassigned family M41 unassigned peptidases MER0190713 ftsH2 Cphy_0326
MA M56 unassigned family M56 unassigned peptidases MER0085196 Cphy_2068
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0469355 Cphy_3354
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0862419
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0870649
ME M16 unassigned subfamily M16B unassigned peptidases MER0126132 Cphy_2761
ME M16 unassigned subfamily M16C unassigned peptidases MER0085207 Cphy_0645
MF M17 unassigned family M17 unassigned peptidases MER0085234 Cphy_2184
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0085218 Cphy_3439
MG M24 M24.008 hyperthermophile prolidase MER0085221 Cphy_2530
MG M24 unassigned subfamily M24A unassigned peptidases MER0085175 map Cphy_3645
MH M18 unassigned family M18 unassigned peptidases MER0085215 Cphy_0024
MH M18 unassigned family M18 unassigned peptidases MER0085194 Cphy_3039
MH M20 M20.003 peptidase T MER0085198 pepT Cphy_3349
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0085210 Cphy_0390
MH M20 unassigned subfamily M20B unassigned peptidases MER0117942 Cphy_3485
MH M20 unassigned subfamily M20C unassigned peptidases MER0085222 Cphy_2796
MH M20 unassigned family M20 unassigned peptidases MER0085190
MH M20 unassigned family M20 unassigned peptidases MER0085217 Cphy_1500
MH M42 M42.A02 yhfE g.p. (Bacillus subtilis) MER0085201 Cphy_1100
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0872013 Cphy_2075
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0865200 Cphy_1496
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0862740 Cphy_0188
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0108013 Cphy_0881
MM M50 unassigned subfamily M50A unassigned peptidases MER0085177
MM M50 unassigned family M50 unassigned peptidases MER0085195
MO M23 unassigned subfamily M23B unassigned peptidases MER0126321 Cphy_3063
MO M23 unassigned subfamily M23B unassigned peptidases MER0085185 Cphy_2289
MO M23 unassigned subfamily M23B unassigned peptidases MER0085189 Cphy_3607
MQ M29 unassigned family M29 unassigned peptidases MER0856073 Cphy_3472
MU M103 M103.UNW family M103 non-peptidase homologues MER0085205 Cphy_0071
MU M103 M103.UPW family M103 unassigned peptidases MER0085206 Cphy_0070
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0326910
PA S1 non-peptidase homologue subfamily S1C non-peptidase homologues MER0217842 Cphy_0156
PA S1 unassigned subfamily S1A unassigned peptidases MER0446143 Cphy_3539
PA S1 unassigned subfamily S1C unassigned peptidases MER0085181 Cphy_3543
PA S1 unassigned subfamily S1C unassigned peptidases MER0085235
PA S55 S55.001 SpoIVB peptidase MER0085220 Cphy_2498
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0120029 Cphy_3044
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0164580 Cphy_3414
PB C44 unassigned family C44 unassigned peptidases MER0176263 Cphy_2936
PC C26 C26.964 CTP synthetase MER0450307 pyrG Cphy_0325
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0444446 hisH Cphy_2841
PC C26 C26.A07 At1g63660 (Arabidopsis thaliana) MER0440967 guaA Cphy_0264
PC C26 C26.A25 trp1 (Schizosaccharomyces pombe) MER0435756 Cphy_3847
PC C26 non-peptidase homologue family C26 non-peptidase homologues MER0439630 carA Cphy_0540
PC C26 unassigned family C26 unassigned peptidases MER0444990 Cphy_2536
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0124862 Cphy_0371
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0162054 Cphy_1973
PC S51 non-peptidase homologue family S51 non-peptidase homologues MER0085172 Cphy_3342
PC S51 unassigned family S51 unassigned peptidases MER1357008
PE T5 T05.002 ArgJ protein (archea) MER0117473 argJ Cphy_1949
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0085223
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0085227
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0085228
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0085229
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0085230
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0085231
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0085232
SB S8 unassigned subfamily S8A unassigned peptidases MER0987368 Cphy_3538
SB S8 unassigned subfamily S8A unassigned peptidases MER0085192 Cphy_0532
SB S8 unassigned subfamily S8A unassigned peptidases MER0085193 Cphy_3062
SB S8 unassigned subfamily S8A unassigned peptidases MER0085236 Cphy_1747
SB S8 unassigned subfamily S8A unassigned peptidases MER0085187 Cphy_3698
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER0997456 Cphy_0973
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER1000343 Cphy_1473
SC S9 unassigned family S9 unassigned peptidases MER0209697 Cphy_0625
SC S9 unassigned family S9 unassigned peptidases MER0211020 Cphy_0658
SE S11 S11.004 K15-type DD-transpeptidase MER0085191 Cphy_2366
SE S11 S11.005 D-Ala-D-Ala carboxypeptidase DacF MER0085182 Cphy_2587
SE S11 non-peptidase homologue family S11 non-peptidase homologues MER0948701 Cphy_1197
SE S11 unassigned family S11 unassigned peptidases MER0118847 Cphy_2582
SE S11 unassigned family S11 unassigned peptidases MER0085219 Cphy_3929
SE S12 S12.950 esterase EstB MER0161631 Cphy_0866
SE S12 non-peptidase homologue family S12 non-peptidase homologues MER1027931 Cphy_2232
SE S12 unassigned family S12 unassigned peptidases MER0120000 Cphy_1457
SE S12 unassigned family S12 unassigned peptidases MER0142027 Cphy_3866
SE S12 unassigned family S12 unassigned peptidases MER0421858 Cphy_0190
SF S24 S24.001 repressor LexA MER0122851 lexA Cphy_2543
SF S26 non-peptidase homologue subfamily S26A non-peptidase homologues MER0085200 Cphy_1095
SF S26 unassigned subfamily S26A unassigned peptidases MER0085173 Cphy_2284
SF S26 unassigned subfamily S26A unassigned peptidases MER0085178 Cphy_2877
SF S26 unassigned subfamily S26A unassigned peptidases MER0085180 Cphy_2402
SF S26 unassigned subfamily S26A unassigned peptidases MER0085179 Cphy_2878
SJ S16 S16.001 Lon-A peptidase MER0085211 lon Cphy_0379
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1030362 Cphy_3459
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1034132 Cphy_2724
SK S14 S14.001 peptidase Clp (type 1) MER0085237 clpP2 Cphy_0972
SK S14 S14.001 peptidase Clp (type 1) MER0085212 clpP1 Cphy_0377
SK S14 S14.012 YmfB g.p. (Bacillus subtilis) MER0085203
SK S41 S41.004 C-terminal processing peptidase-3 MER0085188 Cphy_3606
SK S41 unassigned subfamily S41A unassigned peptidases MER0161687 Cphy_1188
SS S66 S66.001 murein tetrapeptidase LD-carboxypeptidase (Pseudomonas-type) MER0085213 Cphy_0745
SS S66 unassigned family S66 unassigned peptidases MER0085202
SS S66 unassigned family S66 unassigned peptidases MER0085208
ST S54 unassigned family S54 unassigned peptidases MER1077991 Cphy_1512
ST S54 unassigned family S54 unassigned peptidases MER0111965 Cphy_0042
U- U32 U32.002 collagenase (Helicobacter-type) MER0085186 Cphy_2291
U- U32 unassigned family U32 unassigned peptidases MER0071481 Cphy_1336
U- U32 unassigned family U32 unassigned peptidases MER0085184
U- U32 unassigned family U32 unassigned peptidases MER0161752
U- U32 unassigned family U32 unassigned peptidases MER0161753

GENOME ANALYSIS: Comparison with 96 completely sequenced genomes from genus Clostridium
Family Comment
C11 significant presence (1 homologues)
M1 significant presence (1 homologues)
M103 significant presence (2 homologues)
M17 significant presence (1 homologues)
M26 significant presence (1 homologues)
M32 significant presence (1 homologues)