Nitrobacter sp. Nb-311A

Taxonomy
Taxonomy database identifier: 314253
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Rhizobiales
Family Bradyrhizobiaceae
Genus Nitrobacter
Species sp. Nb-311A
Peptidase View peptidase sequences from Nitrobacter sp. Nb-311A
Count of known and putative peptidases: 75, non-peptidase homologues 10
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 A32.001 PerP peptidase (Caulobacter sp.) MER0241813 NB311A_12709
AA A32 unassigned family A32 unassigned peptidases MER0241645 NB311A_02787
AC A8 unassigned family A8 unassigned peptidases MER0062129 lspA NB311A_14602
AD A24 unassigned subfamily A24A unassigned peptidases MER0063526 NB311A_03164
CD C14 C14.026 paracaspase MER0083338 NB311A_10036
CD C14 non-peptidase homologue subfamily C14B non-peptidase homologues MER0063980 NB311A_10453
CD C14 non-peptidase homologue family C14 non-peptidase homologues MER0083340 NB311A_10393
CD C14 unassigned subfamily C14B unassigned peptidases MER0083341 NB311A_19000
CD C14 unassigned subfamily C14B unassigned peptidases MER0083345 NB311A_11257
CD C14 unassigned subfamily C14B unassigned peptidases MER0429416 NB311A_07238
CF C15 unassigned family C15 unassigned peptidases MER0062022 NB311A_17951
CL C82 C82.003 ykuD transpeptidase MER0076688 Dvul_2495
CL C82 unassigned subfamily C82A unassigned peptidases MER0742314 NB311A_03339
CL C82 unassigned subfamily C82A unassigned peptidases MER0737238 NB311A_07633
CL C82 unassigned subfamily C82A unassigned peptidases MER0737704 NB311A_06988
CL C82 unassigned subfamily C82A unassigned peptidases MER0076690 NB311A_14747 Dvul_2495
CL C82 unassigned subfamily C82A unassigned peptidases MER0740550 NB311A_20941
CL C82 unassigned subfamily C82A unassigned peptidases MER0076689 NB311A_01689 Dvul_2495
CL C82 unassigned subfamily C82A unassigned peptidases MER0738778 NB311A_17279
CL C82 unassigned subfamily C82A unassigned peptidases MER0737702 NB311A_14340
CL C82 unassigned subfamily C82A unassigned peptidases MER0122599 NB311A_06853
CL C82 unassigned subfamily C82A unassigned peptidases MER0243942 NB311A_04639
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0117093 NB311A_03214
CO C40 unassigned family C40 unassigned peptidases MER0083344 NB311A_12539
CO C40 unassigned family C40 unassigned peptidases MER0178758
G- G5 unassigned family G5 unassigned peptidases MER0936088 NB311A_02406
MA M3 unassigned subfamily M3A unassigned peptidases MER0063522 NB311A_16829
MA M3 unassigned subfamily M3B unassigned peptidases MER0063521 NB311A_10925
MA M10 unassigned subfamily M10B unassigned peptidases MER0063050 NB311A_21181
MA M41 M41.001 FtsH peptidase MER0063525 ftsH NB311A_15507
MA M48 unassigned subfamily M48B unassigned peptidases MER0063052 NB311A_14967
MA M48 unassigned subfamily M48B unassigned peptidases MER0063053 htpX NB311A_07488
MA M48 unassigned subfamily M48C unassigned peptidases MER0063057 NB311A_04514
MA M48 unassigned family M48 unassigned peptidases MER0063044 NB311A_05655
MA M78 unassigned family M78 unassigned peptidases MER0909349 NB311A_13666
MA M78 unassigned family M78 unassigned peptidases MER0909922 NB311A_13291
MA M78 unassigned family M78 unassigned peptidases MER0908592 NB311A_13711
MD M15 non-peptidase homologue family M15 non-peptidase homologues MER0178596 NB311A_10910
MD M74 unassigned family M74 unassigned peptidases MER0083350 mepA NB311A_02884
MD M74 unassigned family M74 unassigned peptidases MER1263352
ME M16 M16.019 YMXG peptidase MER0063037 NB311A_14612
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0063038 NB311A_14617
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0063047 NB311A_05468
ME M16 unassigned subfamily M16B unassigned peptidases MER0063048 NB311A_05468
MF M17 unassigned family M17 unassigned peptidases MER0063985 NB311A_03209
MF M17 unassigned family M17 unassigned peptidases MER0083342 pepA NB311A_19110
MG M24 M24.009 aminopeptidase P1 MER0083346 NB311A_20921
MG M24 unassigned subfamily M24A unassigned peptidases MER0083351 NB311A_02914
MH M20 unassigned subfamily M20A unassigned peptidases MER0846598 dapE
MH M20 unassigned subfamily M20B unassigned peptidases MER0063518 NB311A_02566
MH M20 unassigned family M20D unassigned peptidases MER0063517 NB311A_17856
MM M50 unassigned subfamily M50B unassigned peptidases MER0063516 NB311A_10056
MM M50 unassigned subfamily M50B unassigned peptidases MER0063039 NB311A_06413
MO M23 M23.009 Mername-AA292 peptidase MER0063527 NB311A_03599
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0063520 NB311A_05775
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0480085
MO M23 unassigned subfamily M23B unassigned peptidases MER0063783 NB311A_19085
MQ M29 M29.001 aminopeptidase T MER0063982 NB311A_18281
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0083349 NB311A_08578
MU M103 M103.UNW family M103 non-peptidase homologues MER0083339 NB311A_14692
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0327131
PA S1 S01.442 HtrA stress response protease (Brucella-type) MER0063049 NB311A_00925
PA S1 unassigned subfamily S1A unassigned peptidases MER0063325 NB311A_12302
PA S1 unassigned subfamily S1B unassigned peptidases MER0217445
PA S1 unassigned subfamily S1B unassigned peptidases MER0217963
PA S1 unassigned subfamily S1C unassigned peptidases MER0063046 NB311A_12624
PA S1 unassigned subfamily S1C unassigned peptidases MER0083347 NB311A_21026
PA S1 unassigned subfamily S1C unassigned peptidases MER0061980 NB311A_07173
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0141584 NB311A_02341
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458737
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0116986 NB311A_19350
PB C59 unassigned family C59 unassigned peptidases MER0122992 NB311A_01814
PB T1 T01.006 HslV component of HslUV peptidase MER0060808 hslV NB311A_07993
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0107366 NB311A_07683
PC C26 C26.964 CTP synthetase MER0450774
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0446591
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0444690
PC C26 C26.A07 At1g63660 (Arabidopsis thaliana) MER0443452
PC C26 C26.A09 At1g25220 (Arabidopsis thaliana)-like peptidase MER0439341
PC C26 C26.A25 trp1 (Schizosaccharomyces pombe) MER0439357
PC C26 unassigned family C26 unassigned peptidases MER0448424 NB311A_20701
PC C26 unassigned family C26 unassigned peptidases MER0440294
PE P1 unassigned family P01 unassigned peptidases MER0063523 NB311A_18091
PE T5 T05.001 ornithine acetyltransferase precursor MER0118425 argJ NB311A_04654
SB S8 unassigned subfamily S8A unassigned peptidases MER0063981 NB311A_17921
SC S9 S09.010 oligopeptidase B MER0063045 NB311A_14270
SC S10 unassigned family S10 unassigned peptidases MER0063524 NB311A_05233
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0210355
SC S33 unassigned family S33 unassigned peptidases MER0213670
SC S33 unassigned family S33 unassigned peptidases MER0209519
SE S11 unassigned family S11 unassigned peptidases MER0083343 NB311A_19235
SE S11 unassigned family S11 unassigned peptidases MER0083348 NB311A_15352
SE S11 unassigned family S11 unassigned peptidases MER0063983 NB311A_17554
SF S24 S24.001 repressor LexA MER0140502 lexA NB311A_06358
SF S24 unassigned family S24 unassigned peptidases MER0063528 NB311A_04104
SF S26 S26.001 signal peptidase I MER0062130 NB311A_19762
SH S78 S78.001 prohead peptidase (bacteriophage HK97) MER0061979 NB311A_12052
SH S78 unassigned family S78 unassigned peptidases MER0063041 NB311A_12272
SJ S16 S16.001 Lon-A peptidase MER0061839 NB311A_02541
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0475197
SK S14 S14.001 peptidase Clp (type 1) MER0063043 clpP NB311A_02531
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0063040 NB311A_00455
SK S41 S41.004 C-terminal processing peptidase-3 MER0063056 NB311A_04264
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER0063055 NB311A_08283
SK S49 unassigned subfamily S49B unassigned peptidases MER0063051 NB311A_14857
ST S54 non-peptidase homologue family S54 non-peptidase homologues MER1084468 NB311A_01270

GENOME ANALYSIS: Comparison with 27 completely sequenced genomes from family Bradyrhizobiaceae
Family Comment
M10 significant presence (1 homologues)
M15 significant decrease in homologues (1 homologues)
S26 significant decrease in homologues (1 homologues)