Sinorhizobium medicae

Taxonomy
Taxonomy database identifier: 110321
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Rhodospirillales
Family Rhizobiaceae
Genus Sinorhizobium
Species medicae
Peptidase View peptidase sequences from Sinorhizobium medicae
Count of known and putative peptidases: 132, non-peptidase homologues 58
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A1 unassigned subfamily A1A unassigned peptidases MER0090784 Smed_2391
AA A32 unassigned family A32 unassigned peptidases MER0241790 Smed_1606
AC A8 unassigned family A8 unassigned peptidases MER0085724 lspA Smed_0026
AC A8 unassigned family A8 unassigned peptidases MER1154735
AC A8 unassigned family A8 unassigned peptidases MER1154743
AD A24 unassigned subfamily A24B unassigned peptidases MER0085712 Smed_5127
AD A24 unassigned subfamily A24B unassigned peptidases MER0085719 Smed_3350
AF A26 unassigned family A26 unassigned peptidases MER0094445 Smed_1643
CA C1 unassigned subfamily C1A unassigned peptidases MER0427847
CA C1 unassigned subfamily C1B unassigned peptidases MER0059863 Smed_6088
CA C70 C70.001 AvrRpt2 peptidase MER0491986
CA C83 unassigned family C83 unassigned peptidases MER0100380 Smed_2987
CL C82 C82.003 ykuD transpeptidase MER0094415 Smed_0575
CL C82 C82.003 ykuD transpeptidase MER0076742 Smed_1273 Smed_4890
CL C82 C82.003 ykuD transpeptidase MER0094495 Smed_3271
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0243907 Smed_4193
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0244014 Smed_0524
CL C82 non-peptidase homologue subfamily C82A non-peptidase homologues MER0740771 Smed_0397
CL C82 unassigned subfamily C82A unassigned peptidases MER0737346 Smed_0398
CL C82 unassigned subfamily C82A unassigned peptidases MER0737301 Smed_1958
CL C82 unassigned subfamily C82A unassigned peptidases MER0742093 Smed_4192
CL C82 unassigned subfamily C82A unassigned peptidases MER0742485 Smed_4890
CL C82 unassigned subfamily C82A unassigned peptidases MER0126306 Smed_0922
CL C82 unassigned subfamily C82A unassigned peptidases MER0243862 Smed_2569
CL C82 unassigned subfamily C82B unassigned peptidases MER0076741 Smed_2125 Smed_2125
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0094197 Smed_3361
CO C40 unassigned family C40 unassigned peptidases MER1125599
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0296592
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0085700 Smed_0642
MA M3 unassigned subfamily M3A unassigned peptidases MER0093442 Smed_3177
MA M3 unassigned family M3 unassigned peptidases MER0093441 Smed_2684
MA M4 unassigned family M4 unassigned peptidases MER1194862
MA M10 unassigned subfamily M10B unassigned peptidases MER1209354
MA M10 unassigned subfamily M10B unassigned peptidases MER0090905 Smed_5278
MA M10 unassigned subfamily M10B unassigned peptidases MER0090903 Smed_5287
MA M105 M105.UPW family M105 unassigned peptidases MER1308735
MA M41 M41.001 FtsH peptidase MER0094478 ftsH Smed_2623
MA M41 unassigned family M41 unassigned peptidases MER0094427 Smed_1202
MA M48 unassigned subfamily M48B unassigned peptidases MER0085734 htpX Smed_3192
MA M48 unassigned subfamily M48C unassigned peptidases MER0094409 Smed_0326
MA M48 unassigned subfamily M48C unassigned peptidases MER0094491 Smed_3110
MD M15 non-peptidase homologue family M15 non-peptidase homologues MER0162319 Smed_1451
MD M74 unassigned family M74 unassigned peptidases MER1263701
MD M74 unassigned family M74 unassigned peptidases MER0085721 Smed_3367
ME M16 unassigned subfamily M16B unassigned peptidases MER0091794 Smed_0535
MF M17 unassigned family M17 unassigned peptidases MER0085696 pepA Smed_0766
MF M17 unassigned family M17 unassigned peptidases MER0085720 Smed_3359
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0085730 Smed_1458
MG M24 M24.A11 SPBC4F6.19c g.p. (Schizosaccharomyces pombe) MER0094457 Smed_2141
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0085711 Smed_5108
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0094462 Smed_2255
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0060037 Smed_3693
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0059866 Smed_5853
MG M24 unassigned subfamily M24A unassigned peptidases MER0085710 map Smed_4508
MG M24 unassigned subfamily M24B unassigned peptidases MER0085708 Smed_2055
MH M20 non-peptidase homologue subfamily M20B non-peptidase homologues MER0472264
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0092109 Smed_0752
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0094470 Smed_2435
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0085703 Smed_4285
MH M20 unassigned subfamily M20A unassigned peptidases MER0000273 dapE Smed_0061
MH M20 unassigned subfamily M20A unassigned peptidases MER0092113 Smed_0346
MH M20 unassigned subfamily M20B unassigned peptidases MER0092111 Smed_5236
MH M20 unassigned subfamily M20B unassigned peptidases MER0085714 Smed_5042
MH M20 unassigned family M20D unassigned peptidases MER0092110 Smed_4612
MH M20 unassigned family M20D unassigned peptidases MER0092114 Smed_0172
MH M20 unassigned family M20D unassigned peptidases MER0092112 Smed_2573
MH M20 unassigned subfamily M20F unassigned peptidases MER0094498 Smed_3383
MH M20 unassigned family M20 unassigned peptidases MER0059877 Smed_5605
MH M20 unassigned family M20 unassigned peptidases MER0094466 Smed_2366
MH M28 unassigned subfamily M28E unassigned peptidases MER1249053
MH M42 unassigned family M42 unassigned peptidases MER0060042 Smed_3665
MJ M19 M19.003 dipeptidase AC MER0094465 Smed_2327
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0093366 Smed_3733
MJ M38 M38.982 urease MER0094468 ureC Smed_2383
MJ M38 M38.A02 PyrC protein (Escherichia coli) MER0094405 pyrC Smed_0106
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0860633 Smed_2983
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0060033 Smed_3843
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0060020 Smed_4007
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059979 Smed_4494
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059977 ade2 Smed_4610
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059976 Smed_4625
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059971 hutI Smed_4659
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059969 Smed_4663
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059928 Smed_5232
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059893 ade3 Smed_5275
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059889 ade4 Smed_5277
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059884 Smed_5333
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059873 Smed_5790
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059872 Smed_5791
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0059870 Smed_5797
MM M50 M50.004 RseP peptidase MER0094425 Smed_1137
MM M50 unassigned subfamily M50B unassigned peptidases MER0059960 Smed_4923
MO M23 M23.004 lysostaphin MER0094426 Smed_1171
MO M23 M23.004 lysostaphin MER0094436 Smed_1477
MO M23 M23.004 lysostaphin MER0094472 Smed_2498
MO M23 M23.004 lysostaphin MER0094489 Smed_3015
MQ M29 M29.001 aminopeptidase T MER0085722 Smed_3504
MQ M29 unassigned family M29 unassigned peptidases MER1246971
MS M75 M75.001 imelysin MER0094503 Smed_3529
MT M81 unassigned family M81 unassigned peptidases MER0223145 Smed_4648
MT M81 unassigned family M81 unassigned peptidases MER0223146 Smed_4654
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0094412 Smed_0421
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0094414 Smed_0505
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405541 flhB Smed_0246
PA S1 unassigned subfamily S1C unassigned peptidases MER1274836
PA S1 unassigned subfamily S1C unassigned peptidases MER0085699 Smed_0637
PA S1 unassigned subfamily S1C unassigned peptidases MER0085705 Smed_1014
PA S1 unassigned subfamily S1C unassigned peptidases MER0085709 Smed_2014
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0060044 Smed_3642
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0094417 Smed_0727
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0094481 Smed_2711
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0059984 Smed_4334
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0059862 Smed_6177
PB C44 unassigned family C44 unassigned peptidases MER0059864 Smed_6008
PB C44 unassigned family C44 unassigned peptidases MER0094497 Smed_3291
PB C45 unassigned family C45 unassigned peptidases MER0060031 Smed_3872
PB T1 T01.006 HslV component of HslUV peptidase MER0094494 hslV Smed_3264
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0060010 Smed_4199
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0094463 Smed_2295
PC C26 C26.957 GMP synthase MER0094501 guaA Smed_3517
PC C26 C26.961 PuuD protein MER0094483 Smed_2762
PC C26 C26.964 CTP synthetase MER0094422 pyrG Smed_1069
PC C26 unassigned family C26 unassigned peptidases MER0094486 carA Smed_3261
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0060023 Smed_3911
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0060019 Smed_4083
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0059948 Smed_5109
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0059880 Smed_5542
PC C56 unassigned family C56 unassigned peptidases MER0059894 Smed_5266
PE P1 unassigned family P01 unassigned peptidases MER0059930 Smed_5170
PE T5 T05.001 ornithine acetyltransferase precursor MER0094473 argJ Smed_2516
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER1280468
SB S8 unassigned subfamily S8A unassigned peptidases MER0085713 Smed_5144
SB S8 unassigned subfamily S8A unassigned peptidases MER0059874 Smed_5774
SB S8 unassigned subfamily S8A unassigned peptidases MER0094444 Smed_1630
SC S9 S09.010 oligopeptidase B MER0085698 Smed_0599
SC S9 S09.940 S-formylglutathione hydrolase FrmB (Escherichi coli) MER0060022 Smed_3945
SC S9 S09.940 S-formylglutathione hydrolase FrmB (Escherichi coli) MER0094420 Smed_1021
SC S9 S09.A43 YpfH protein (Escherichi coli) MER0059966 Smed_4692
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0059981 Smed_4452
SC S9 unassigned subfamily S9C unassigned peptidases MER0060015 Smed_4107
SC S9 unassigned subfamily S9C unassigned peptidases MER0059927 Smed_5249
SC S9 unassigned subfamily S9C unassigned peptidases MER0094435 Smed_1470
SC S9 unassigned family S9 unassigned peptidases MER0059989 Smed_4300
SC S9 unassigned family S9 unassigned peptidases MER0059895 Smed_5258
SC S9 unassigned family S9 unassigned peptidases MER0059878 Smed_5571
SC S9 unassigned family S9 unassigned peptidases MER0094407 Smed_0185
SC S9 unassigned family S9 unassigned peptidases MER0094460 Smed_2185
SC S9 unassigned family S9 unassigned peptidases MER0214119 Smed_2402
SC S9 unassigned family S9 unassigned peptidases MER0094500 Smed_3482
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1027065 Smed_1470
SC S15 unassigned family S15 unassigned peptidases MER0094459 Smed_2184
SC S33 S33.001 prolyl aminopeptidase MER0085702 Smed_0717
SC S33 S33.010 SCO7095-type peptidase MER0094424 Smed_1112
SC S33 S33.010 SCO7095-type peptidase MER0094449 Smed_1790
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0060028 Smed_3910
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0059882 Smed_5519
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0059881 Smed_5530
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0059879 Smed_5546
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0059876 Smed_5719
SC S33 unassigned family S33 unassigned peptidases MER0060021 Smed_3969
SC S33 unassigned family S33 unassigned peptidases MER0060017 Smed_4084
SC S33 unassigned family S33 unassigned peptidases MER0060006 Smed_4206
SC S33 unassigned family S33 unassigned peptidases MER0060005 Smed_4297
SC S33 unassigned family S33 unassigned peptidases MER0059954 Smed_5059
SC S33 unassigned family S33 unassigned peptidases MER0059885 Smed_5324
SC S33 unassigned family S33 unassigned peptidases MER0059883 Smed_5449
SC S33 unassigned family S33 unassigned peptidases MER0059875 Smed_5761
SC S33 unassigned family S33 unassigned peptidases MER0059869 Smed_5825
SC S33 unassigned family S33 unassigned peptidases MER0059861 Smed_6254
SC S33 unassigned family S33 unassigned peptidases MER0094410 Smed_0370
SC S33 unassigned family S33 unassigned peptidases MER0094447 Smed_1681
SC S33 unassigned family S33 unassigned peptidases MER0094448 Smed_1764
SC S33 unassigned family S33 unassigned peptidases MER0094456 Smed_2119
SC S33 unassigned family S33 unassigned peptidases MER0094482 Smed_2716
SC S33 unassigned family S33 unassigned peptidases MER0094490 Smed_3037
SE S11 S11.A01 penP g.p. (Bacillus subtilis) MER0094416 Smed_0594
SE S11 non-peptidase homologue family S11 non-peptidase homologues MER0085728 Smed_1293
SE S11 unassigned family S11 unassigned peptidases MER0085716 Smed_0506
SE S11 unassigned family S11 unassigned peptidases MER0085704 Smed_1040
SE S11 unassigned family S11 unassigned peptidases MER0094434 Smed_1460
SE S11 unassigned family S11 unassigned peptidases MER0094471 Smed_2437
SE S11 unassigned family S11 unassigned peptidases MER0085726 Smed_2572
SE S12 S12.006 class C beta-lactamase MER0059961 Smed_4921
SE S12 S12.A23 GYO_0385 g.p. (Bacillus subtilis) MER0059958 Smed_4964
SE S12 unassigned family S12 unassigned peptidases MER0094455 Smed_2109
SF S24 S24.001 repressor LexA MER0094429 lexA Smed_1353
SF S24 unassigned family S24 unassigned peptidases MER0094406 Smed_0139
SF S24 unassigned family S24 unassigned peptidases MER0094451 Smed_1854
SF S24 unassigned family S24 unassigned peptidases MER0094452 Smed_1918
SF S26 S26.001 signal peptidase I MER0085701 Smed_0681
SF S26 S26.014 TraF peptidase MER0091781 Smed_5392
SH S78 S78.001 prohead peptidase (bacteriophage HK97) MER0094428 Smed_1335
SJ S16 S16.001 Lon-A peptidase MER0085706 Smed_0874
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0480152 Smed_0729
SK S14 S14.001 peptidase Clp (type 1) MER0085707 clpP1 Smed_0872
SK S14 S14.001 peptidase Clp (type 1) MER0085733 clpP3 Smed_3078
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0060034 Smed_3760
SK S14 unassigned family S14 unassigned peptidases MER0085718 clpP2 Smed_2289
SK S41 non-peptidase homologue subfamily S41A non-peptidase homologues MER0085715 Smed_4927
SK S41 unassigned subfamily S41A unassigned peptidases MER0085732 Smed_3016
SK S49 S49.005 archaean signal peptide peptidase 1 MER0059978 Smed_4519
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER0085723 Smed_0020
SK S49 unassigned subfamily S49B unassigned peptidases MER1355005
SK S49 unassigned subfamily S49B unassigned peptidases MER1354291
SK S49 unassigned subfamily S49B unassigned peptidases MER1353359
SK S49 unassigned subfamily S49B unassigned peptidases MER1353436
SK S49 unassigned subfamily S49B unassigned peptidases MER0085717 Smed_0461
SK S49 unassigned subfamily S49B unassigned peptidases MER0085697 Smed_1657
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0094474 Smed_2531
ST S54 unassigned family S54 unassigned peptidases MER0094421 Smed_1045
U- U32 unassigned family U32 unassigned peptidases MER0085725 Smed_6298

GENOME ANALYSIS: Comparison with 38 completely sequenced genomes from family Rhizobiaceae
Family Comment
A1 significant presence (1 homologues)
C1 significant presence (2 homologues)
C45 significant presence (1 homologues)
C70 significant presence (1 homologues)
C83 significant presence (1 homologues)
M4 significant presence (1 homologues)
M105 significant presence (1 homologues)
M28 significant presence (1 homologues)
M42 significant presence (1 homologues)
S12 significant decrease in homologues (3 homologues)
T3 significant decrease in homologues (1 homologues)
U32 significant presence (1 homologues)