Symbiobacterium thermophilum

Taxonomy
Taxonomy database identifier: 2734
Superkingdom Bacteria
Phylum Firmicutes
Class Actinobacteria
Genus Symbiobacterium
Species thermophilum
Peptidase View peptidase sequences from Symbiobacterium thermophilum
Count of known and putative peptidases: 121, non-peptidase homologues 25
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
A- A36 unassigned family A36 unassigned peptidases MER0042566 spoIIGA STH1220
AC A8 unassigned family A8 unassigned peptidases MER1155701
AC A8 unassigned family A8 unassigned peptidases MER0041518 lspA STH1242
AD A24 A24.019 ComC peptidase MER0041519 STH1951
AE A25 A25.001 gpr peptidase MER0041865 gpr STH1433
AE A25 non-peptidase homologue family A25 non-peptidase homologues MER1158928
AE A25 unassigned family A25 unassigned peptidases MER1158935
CL C60 unassigned subfamily C60A unassigned peptidases MER0041528 STH714
CL C60 unassigned subfamily C60A unassigned peptidases MER0041527 STH2376
CR C108 C108.001 Prp peptidase (Staphylococcus aureus) MER0148135
G- G5 unassigned family G5 unassigned peptidases MER0938303 STH2474
G- G5 unassigned family G5 unassigned peptidases MER0937471 STH1141
G- G5 unassigned family G5 unassigned peptidases MER0937433 STH797
G- G5 unassigned family G5 unassigned peptidases MER0937524 STH180
MA M3 M03.A08 BSSC8_09230 g.p. (Bacillus subtilis) MER0042027 STH1987
MA M3 unassigned subfamily M3B unassigned peptidases MER1188935
MA M3 unassigned subfamily M3B unassigned peptidases MER0042003 STH737
MA M3 unassigned family M3 unassigned peptidases MER0042004 STH754
MA M3 unassigned family M3 unassigned peptidases MER0042005 STH2435
MA M41 M41.021 FtsH peptidase (Thermotoga-type) MER0042310 ftsH3 STH3198
MA M41 unassigned family M41 unassigned peptidases MER0042341 ftsH1 STH2541
MA M41 unassigned family M41 unassigned peptidases MER0042340 STH1638
MA M41 unassigned family M41 unassigned peptidases MER0042339 ftsH2 STH126
MA M48 unassigned subfamily M48A unassigned peptidases MER0042375 STH959
MA M48 unassigned subfamily M48B unassigned peptidases MER0042380 STH1326
MA M56 unassigned family M56 unassigned peptidases MER0042486 STH1628
MC M14 non-peptidase homologue hypothetical protein YcjI (Escherichia coli) MER0042044 STH1567
MD M15 unassigned subfamily M15B unassigned peptidases MER0042054 STH1075
ME M16 M16.A15 BSSC8_26020 g.p. (Bacillus subtilis) MER0041530 STH1532
ME M16 non-peptidase homologue subfamily M16A non-peptidase homologues MER0055197 STH3196
ME M16 unassigned subfamily M16B unassigned peptidases MER0041531 STH913
ME M16 unassigned subfamily M16B unassigned peptidases MER0041532 STH3195
MF M17 unassigned family M17 unassigned peptidases MER0041533 pepA STH1774
MG M24 M24.008 hyperthermophile prolidase MER0041547 STH1865
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0041545 STH775
MG M24 unassigned subfamily M24A unassigned peptidases MER0042232 STH2575
MG M24 unassigned subfamily M24B unassigned peptidases MER0041546 STH828
MH M20 M20.020 p-aminobenzoyl-glutamate hydrolase subunit A MER0041541 STH1690
MH M20 unassigned subfamily M20B unassigned peptidases MER0041540 STH1610
MH M20 unassigned subfamily M20B unassigned peptidases MER0041539 STH1689
MH M20 unassigned family M20D unassigned peptidases MER0041535 STH1148
MH M20 unassigned subfamily M20F unassigned peptidases MER0041536 STH1238
MH M20 unassigned subfamily M20F unassigned peptidases MER0041538 STH1270
MH M20 unassigned family M20 unassigned peptidases MER0041537 STH1479 STH1479
MH M42 M42.011 aminopeptidase I alpha chain (Bacillus-type) MER0041552 STH2675
MH M42 non-peptidase homologue family M42 non-peptidase homologues MER0041551 STH1081
MH M42 unassigned family M42 unassigned peptidases MER0041553 STH1079
MH M42 unassigned family M42 unassigned peptidases MER0041550 STH1080
MJ M19 M19.007 thermostable dipeptidase (Brevibacillus-type) MER0041534 STH1775
MJ M19 unassigned family M19 unassigned peptidases MER1200712
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0042284 STH1912
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0042285 STH1913
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0042689 STH1937
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0042741 STH3170
MJ M38 unassigned family M38 unassigned peptidases MER0038131 STH605
MJ M38 unassigned family M38 unassigned peptidases MER0038276 STH1258
MJ M38 unassigned family M38 unassigned peptidases MER0042778 mtaD STH1703
MJ M38 unassigned family M38 unassigned peptidases MER0042690 hutI STH3191
MM M50 unassigned subfamily M50A unassigned peptidases MER0042616 STH1500
MM M50 unassigned subfamily M50B unassigned peptidases MER0042461 STH1804
MM M50 unassigned family M50 unassigned peptidases MER0042460 STH422
MO M23 M23.009 Mername-AA292 peptidase MER0042165 STH68
MO M23 M23.009 Mername-AA292 peptidase MER0042169 STH2132
MO M23 M23.009 Mername-AA292 peptidase MER0042171 STH3311
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0042106 STH102
MO M23 unassigned subfamily M23B unassigned peptidases MER0042166 STH141
MO M23 unassigned subfamily M23B unassigned peptidases MER0042167 STH877
MO M23 unassigned subfamily M23B unassigned peptidases MER0042107 STH1076
MO M23 unassigned subfamily M23B unassigned peptidases MER0042168 STH1135
MO M23 unassigned subfamily M23B unassigned peptidases MER0042170 STH2503
MO M23 unassigned subfamily M23B unassigned peptidases MER0042172 STH3327
MP M67 unassigned subfamily M67B unassigned peptidases MER0907629 STH1150
MP M67 unassigned subfamily M67B unassigned peptidases MER0176381 STH1151
MQ M29 non-peptidase homologue family M29 non-peptidase homologues MER0041549 STH2954
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0327159
PA S1 non-peptidase homologue subfamily S1C non-peptidase homologues MER0217469 STH219
PA S1 unassigned subfamily S1C unassigned peptidases MER0041558 STH168
PA S1 unassigned subfamily S1C unassigned peptidases MER0041556 STH417
PA S1 unassigned subfamily S1C unassigned peptidases MER0041557 STH2025
PA S55 S55.001 SpoIVB peptidase MER0041609 spoIVB STH1833
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0041876 STH2854
PB C44 C44.976 AsnB protein MER0038385 STH259
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0041885 glmS STH196
PB C44 unassigned family C44 unassigned peptidases MER0041914 STH231
PB S45 S45.003 cephalosporin C acylase precursor MER0041602 STH69
PB S45 non-peptidase homologue family S45 non-peptidase homologues MER1063644 STH70
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0041610 STH3166
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0041524 STH1408
PC C26 C26.957 GMP synthase MER0041521 guaA STH501
PC C26 C26.A33 carbamoyl-phosphate synthase, small (Pyrococcus furiosus) MER0041522 carA STH1203
PC C26 unassigned family C26 unassigned peptidases MER0041520 STH2326
PC C26 unassigned family C26 unassigned peptidases MER0041523 STH2933
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0041526 STH1390
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0170672 purQ STH2856
PC S51 non-peptidase homologue family S51 non-peptidase homologues MER1060178 STH1722
PC S51 non-peptidase homologue family S51 non-peptidase homologues MER0041605 STH2423
PE P1 unassigned family P01 unassigned peptidases MER0042504 STH2942
PE T5 T05.002 ArgJ protein (archea) MER0042556 argJ STH2890
SB S8 S08.020 C5a peptidase MER0041562 STH755
SB S8 S08.026 nasp peptidase MER0041561 STH1033
SB S8 unassigned subfamily S8A unassigned peptidases MER1281242
SB S8 unassigned subfamily S8A unassigned peptidases MER0041563 STH62
SB S8 unassigned subfamily S8A unassigned peptidases MER0041559 STH487
SB S8 unassigned subfamily S8A unassigned peptidases MER0041560 STH718
SB S53 unassigned family S53 unassigned peptidases MER0041606 STH2270
SC S9 S09.946 BSU33620 g.p. (Bacillus subtilis) and similar MER0041567 STH2045
SC S9 S09.B04 BSU23640 g.p. (Bacillus subtilis) MER0042797 STH697
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0042811 STH2101
SC S9 unassigned subfamily S9A unassigned peptidases MER0041570 STH2102 STH2102
SC S9 unassigned subfamily S9C unassigned peptidases MER1302823
SC S9 unassigned subfamily S9C unassigned peptidases MER0042809 STH162
SC S9 unassigned subfamily S9C unassigned peptidases MER0041565 STH956
SC S9 unassigned family S9 unassigned peptidases MER0213201 STH289
SC S9 unassigned family S9 unassigned peptidases MER0042810 STH319
SC S9 unassigned family S9 unassigned peptidases MER0041568 STH906
SC S9 unassigned family S9 unassigned peptidases MER0212885 STH1329
SC S9 unassigned family S9 unassigned peptidases MER0041569 STH2125
SC S9 unassigned family S9 unassigned peptidases MER0041566 STH2880
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0041591 STH728
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0041592 STH2368
SC S33 unassigned family S33 unassigned peptidases MER0041597 STH538
SC S33 unassigned family S33 unassigned peptidases MER0041595 STH807
SC S33 unassigned family S33 unassigned peptidases MER0041599 STH809
SC S33 unassigned family S33 unassigned peptidases MER0041593 STH1392
SC S33 unassigned family S33 unassigned peptidases MER0041594 metX STH1685
SC S33 unassigned family S33 unassigned peptidases MER0041596 STH2786
SC S33 unassigned family S33 unassigned peptidases MER0041598 STH2797
SC S33 unassigned family S33 unassigned peptidases MER0038223 STH2847
SE S11 S11.004 K15-type DD-transpeptidase MER0041573 STH1585
SE S11 S11.005 D-Ala-D-Ala carboxypeptidase DacF MER0041572 STH1815
SE S11 non-peptidase homologue family S11 non-peptidase homologues MER0979233 STH980
SE S11 unassigned family S11 unassigned peptidases MER0975918 STH2432
SE S11 unassigned family S11 unassigned peptidases MER0949030 STH1568
SE S11 unassigned family S11 unassigned peptidases MER0950625 STH915
SE S11 unassigned family S11 unassigned peptidases MER1037573
SE S11 unassigned family S11 unassigned peptidases MER0041575 STH989
SE S11 unassigned family S11 unassigned peptidases MER0041574 STH2375
SE S11 unassigned family S11 unassigned peptidases MER0041571 STH2587
SE S12 S12.950 esterase EstB MER0041578 STH302
SE S12 S12.950 esterase EstB MER0041576 STH635
SE S12 unassigned family S12 unassigned peptidases MER0041577 STH2021
SF S24 S24.001 repressor LexA MER0041586 lexA STH1736
SF S26 S26.011 signal peptidase SipW (Bacillus-type) MER0041590 STH1180
SF S26 unassigned subfamily S26A unassigned peptidases MER0041587 STH381
SF S26 unassigned subfamily S26A unassigned peptidases MER0041588 STH1472
SF S26 unassigned subfamily S26A unassigned peptidases MER0041589 STH2445
SJ S16 S16.001 Lon-A peptidase MER0042673 STH361
SJ S16 S16.005 Lon-B peptidase MER0041585 STH3316
SJ S16 S16.012 SepM peptidase (Streptococcus mutans) MER0041584 STH1441
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0041582 radA STH3128
SJ S16 unassigned family S16 unassigned peptidases MER0041583 STH360
SK S14 S14.001 peptidase Clp (type 1) MER0041580 clpP1 STH358
SK S14 S14.001 peptidase Clp (type 1) MER0041579 clpP2 STH914
SK S14 S14.012 YmfB g.p. (Bacillus subtilis) MER0052144 STH1558
SK S41 unassigned subfamily S41A unassigned peptidases MER0041601 STH60
SK S41 unassigned subfamily S41A unassigned peptidases MER0041600 STH142
SK S49 unassigned subfamily S49B unassigned peptidases MER0041604 STH2792
SK S49 unassigned subfamily S49C unassigned peptidases MER0041603 STH519
SS S66 S66.001 murein tetrapeptidase LD-carboxypeptidase (Pseudomonas-type) MER0041612 STH2417
SS S66 S66.001 murein tetrapeptidase LD-carboxypeptidase (Pseudomonas-type) MER0041611 STH2808
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0041607 STH1995
ST S54 unassigned family S54 unassigned peptidases MER0041608 STH1868

GENOME ANALYSIS: Comparison with 620 completely sequenced genomes from class Actinobacteria
Family Comment
A25 significant presence (3 homologues)
A36 significant presence (1 homologues)
C108 significant presence (1 homologues)
M14 significant presence (1 homologues)
M29 significant presence (1 homologues)
M42 significant presence (4 homologues)
M56 significant presence (1 homologues)
N6 significant presence (1 homologues)
P1 significant presence (1 homologues)
S41 significant presence (2 homologues)
S49 significant presence (2 homologues)
S53 significant presence (1 homologues)
S55 significant presence (1 homologues)
S66 significant presence (2 homologues)