Ramlibacter tataouinensis

Taxonomy
Taxonomy database identifier: 94132
Superkingdom Bacteria
Phylum Proteobacteria
Class Betaproteobacteria
Order Burkholderiales
Family Comamonadaceae
Genus Ramlibacter
Species tataouinensis
Peptidase View peptidase sequences from Ramlibacter tataouinensis
Count of known and putative peptidases: 93, non-peptidase homologues 34
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 unassigned family A32 unassigned peptidases MER0276773 Rta_10560
AC A8 unassigned family A8 unassigned peptidases MER1153089
AC A8 unassigned family A8 unassigned peptidases MER0252455 lspA Rta_31800
AD A24 A24.001 type 4 prepilin peptidase 1 MER0252529 pilD Rta_29160
CD C13 unassigned family C13 unassigned peptidases MER0252269 Rta_30450
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0252369 pcp Rta_10320
CL C82 unassigned subfamily C82A unassigned peptidases MER0463235 Rta_01850
CO C40 C40.006 PgpA peptidase MER0251287 Rta_04600
CO C40 C40.006 PgpA peptidase MER0252655 Rta_18710
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0251153 pepN Rta_10390
MA M3 M03.004 oligopeptidase A MER0252129 prlC Rta_18630
MA M3 unassigned subfamily M3B unassigned peptidases MER1190738
MA M41 M41.001 FtsH peptidase MER0252852 hflB2 Rta_17640
MA M41 unassigned family M41 unassigned peptidases MER0250831 hflB1 Rta_05130
MA M41 unassigned family M41 unassigned peptidases MER0251286 Rta_19350
MA M48 M48.002 HtpX peptidase MER0252633 htpX Rta_09440
MA M48 unassigned subfamily M48A unassigned peptidases MER0251990 Rta_12180
MA M48 unassigned subfamily M48B unassigned peptidases MER0252060 Rta_30340
MA M48 unassigned subfamily M48C unassigned peptidases MER0252113 Rta_01970
MA M48 unassigned subfamily M48C unassigned peptidases MER0252424 Rta_37300
MA M61 M61.002 BcepAP aminopeptidase (Burkholderia cepacia) MER0252122 Rta_34320
MA M90 unassigned family M90 unassigned peptidases MER0228800 Rta_15350
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0250716 Rta_01460
MC M14 unassigned family M14 unassigned peptidases MER0252265 Rta_23650
ME M16 M16.019 YMXG peptidase MER0251312 Rta_33510
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0251924 Rta_33500
ME M16 unassigned subfamily M16B unassigned peptidases MER0251923 Rta_33500
MF M17 M17.003 PepA aminopeptidase MER0251389 pepA Rta_19420
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0252766 map Rta_20340
MG M24 unassigned subfamily M24A unassigned peptidases MER1241471
MG M24 unassigned subfamily M24A unassigned peptidases MER0251693 map Rta_21580
MG M24 unassigned subfamily M24B unassigned peptidases MER1243640
MG M24 unassigned subfamily M24B unassigned peptidases MER0319314 pepP Rta_37800
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0251619 Rta_32660
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0251224 Rta_32670
MH M20 unassigned subfamily M20A unassigned peptidases MER0250645 dapE Rta_21010
MH M20 unassigned family M20D unassigned peptidases MER0304308 Rta_08550
MH M20 unassigned family M20D unassigned peptidases MER0371978 Rta_15460
MH M20 unassigned family M20D unassigned peptidases MER0372542 hipO Rta_34460
MH M20 unassigned family M20D unassigned peptidases MER0372592 Rta_35240
MH M20 unassigned family M20 unassigned peptidases MER0252833 argE Rta_08560
MH M20 unassigned family M20 unassigned peptidases MER0251256 Rta_24720
MH M20 unassigned family M20 unassigned peptidases MER0251834 Rta_37940
MH M42 unassigned family M42 unassigned peptidases MER0881069 Rta_34210
MJ M38 M38.982 urease MER0251890 ureC Rta_32870
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0252614 guaD Rta_32210
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0252492 pyrC Rta_34070
MM M50 unassigned subfamily M50B unassigned peptidases MER0893023 Rta_17500
MM M50 unassigned subfamily M50B unassigned peptidases MER0897142 Rta_10280
MM M50 unassigned family M50 unassigned peptidases MER0890216 Rta_22800
MO M23 M23.009 Mername-AA292 peptidase MER0252073 Rta_07070
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0251637 Rta_24410
MO M23 unassigned subfamily M23B unassigned peptidases MER0251531 Rta_08470
MS M75 unassigned family M75 unassigned peptidases MER0251588 Rta_24270
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0250627 tldD Rta_09920
MU M103 M103.950 microcin-processing peptidase 1 homologue MER0251306 pmbA Rta_26700
NB N6 N06.004 HrcU protein (Xanthomonas sp.) MER0252915 Rta_29720
PA S1 unassigned subfamily S1C unassigned peptidases MER1272629
PA S1 unassigned subfamily S1C unassigned peptidases MER1273677
PA S1 unassigned subfamily S1C unassigned peptidases MER0251570 degQ Rta_08380
PA S1 unassigned subfamily S1C unassigned peptidases MER0250718 degQ Rta_23250
PA S1 unassigned subfamily S1C unassigned peptidases MER0251832 degP Rta_28450
PA S1 unassigned subfamily S1C unassigned peptidases MER0252900 Rta_28800
PA S1 unassigned subfamily S1C unassigned peptidases MER0251628 Rta_31980
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0252085 purF Rta_10690
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0252437 gltB Rta_08100
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0252699 glmS Rta_07630
PB C44 unassigned family C44 unassigned peptidases MER0458382 Rta_34230
PB T1 T01.007 CodW component of CodWX peptidase MER0251020 hslV Rta_09580
PB T1 unassigned subfamily T1A unassigned peptidases MER1105310
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0252167 ggt Rta_04610
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0251571 Rta_24680
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0250873 Rta_16680
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0252545 Rta_20280
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0252182 trpG Rta_35830
PC C26 C26.957 GMP synthase MER0251350 guaA Rta_19730
PC C26 C26.961 PuuD protein MER0251758 Rta_06770
PC C26 C26.961 PuuD protein MER0250950 Rta_31390
PC C26 C26.964 CTP synthetase MER0448810 pyrG Rta_25790
PC C26 unassigned family C26 unassigned peptidases MER0252220 Rta_06780
PC C26 unassigned family C26 unassigned peptidases MER0446510 hisH Rta_08260
PC C26 unassigned family C26 unassigned peptidases MER0250864 carA Rta_17590
PC C26 unassigned family C26 unassigned peptidases MER0252775 Rta_37570
PC C56 C56.001 PfpI peptidase MER0252361 Rta_20640
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0252104 purL Rta_20330
PE P1 P01.101 pantetheinyl hydrolase ThnT precursor MER0252179 Rta_11680
PE T5 T05.001 ornithine acetyltransferase precursor MER0251540 argJ Rta_10160
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0250977 Rta_22840
SC S9 S09.940 S-formylglutathione hydrolase FrmB (Escherichi coli) MER0250820 Rta_01040
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0251122 Rta_02350
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0252531 Rta_12730
SC S9 unassigned subfamily S9C unassigned peptidases MER0251027 Rta_12970
SC S9 unassigned subfamily S9C unassigned peptidases MER0251742 Rta_26020
SC S9 unassigned family S9 unassigned peptidases MER0251756 Rta_06460
SC S9 unassigned family S9 unassigned peptidases MER0252316 Rta_09130
SC S9 unassigned family S9 unassigned peptidases MER0251987 Rta_36830
SC S33 S33.990 haloalkane dehalogenase MER0251042 Rta_19770
SC S33 unassigned family S33 unassigned peptidases MER0250789 Rta_00570
SC S33 unassigned family S33 unassigned peptidases MER0250952 Rta_01150
SC S33 unassigned family S33 unassigned peptidases MER0251518 Rta_14550
SC S33 unassigned family S33 unassigned peptidases MER0250656 Rta_33400
SC S33 unassigned family S33 unassigned peptidases MER0251226 Rta_37935
SE S11 S11.002 murein-DD-endopeptidase MER0252259 pbpG Rta_22900
SE S11 unassigned family S11 unassigned peptidases MER0251396 dac Rta_03200
SE S11 unassigned family S11 unassigned peptidases MER0250837 Rta_21760
SE S11 unassigned family S11 unassigned peptidases MER0252091 Rta_21770
SE S11 unassigned family S11 unassigned peptidases MER0252149 bla Rta_27390
SE S12 S12.950 esterase EstB MER0252486 Rta_31960
SE S12 S12.950 esterase EstB MER0252865 Rta_36390
SE S12 S12.A23 GYO_0385 g.p. (Bacillus subtilis) MER0252331 Rta_07450
SE S13 S13.003 D-Ala-D-Ala carboxypeptidase PBP3 MER0251686 Rta_36700
SE S13 unassigned family S13 unassigned peptidases MER1316557
SF S24 S24.001 repressor LexA MER0252292 lexA Rta_21990
SF S26 S26.001 signal peptidase I MER0251574 lepB Rta_28430
SF S26 unassigned subfamily S26A unassigned peptidases MER1333788
SJ S16 S16.001 Lon-A peptidase MER0251318 lonA Rta_15800
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0252941 sms Rta_01840
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0251603 Rta_01420
SJ S16 unassigned family S16 unassigned peptidases MER1325266
SK S14 S14.001 peptidase Clp (type 1) MER0251555 clpP Rta_15780
SK S14 unassigned family S14 unassigned peptidases MER0251604 clpP Rta_05770
SK S41 S41.004 C-terminal processing peptidase-3 MER0252308 Rta_30780 Rta_30780
SK S41 unassigned subfamily S41A unassigned peptidases MER0251595 Rta_06800
SK S49 unassigned subfamily S49B unassigned peptidases MER1356157
SK S49 unassigned subfamily S49B unassigned peptidases MER1355989
SK S49 unassigned subfamily S49B unassigned peptidases MER0321525 Rta_28600
SS S66 S66.002 murein tetrapeptidase LD-carboxypeptidase (Escherichia-type) MER0252534 Rta_19780
U- U32 U32.003 collagenase (Salmonella-type) MER0251124 Rta_20310
U- U69 unassigned family U69 unassigned peptidases MER0250964 Rta_22840
U- U69 unassigned family U69 unassigned peptidases MER0250965 Rta_22840
U- U69 unassigned family U69 unassigned peptidases MER0250966 Rta_22840
U- U69 unassigned family U69 unassigned peptidases MER0250967 Rta_22840
U- U69 unassigned family U69 unassigned peptidases MER0250968 Rta_22840
U- U69 unassigned family U69 unassigned peptidases MER0250969 Rta_22840
U- U69 unassigned family U69 unassigned peptidases MER0250970 Rta_22840
U- U69 unassigned family U69 unassigned peptidases MER0250971 Rta_22840
U- U69 unassigned family U69 unassigned peptidases MER0250972 Rta_22840
U- U69 unassigned family U69 unassigned peptidases MER0250973 Rta_22840
U- U69 unassigned family U69 unassigned peptidases MER0250974 Rta_22840
U- U69 unassigned family U69 unassigned peptidases MER0250975 Rta_22840
U- U69 unassigned family U69 unassigned peptidases MER0250978 Rta_22840

GENOME ANALYSIS: Comparison with 31 completely sequenced genomes from family Comamonadaceae
Family Comment
C13 significant presence (1 homologues)
M42 significant presence (1 homologues)
U69 significant presence (13 homologues)