Silicibacter sp. TrichCH4B

Taxonomy
Taxonomy database identifier: 644076
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Rhodobacterales
Family Rhodobacteraceae
Genus Silicibacter
Species sp. TrichCH4B
Peptidase View peptidase sequences from Silicibacter sp. TrichCH4B
Count of known and putative peptidases: 52, non-peptidase homologues 11
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 A32.002 RC1339 g.p. (Rickettsia conorii) MER0241705 SCH4B_4339
AC A8 unassigned family A8 unassigned peptidases MER0401091 lspA SCH4B_3472
CA C1 unassigned subfamily C1B unassigned peptidases MER0428553
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0462233
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0244070
CL C82 unassigned subfamily C82A unassigned peptidases MER0463655
CL C82 unassigned subfamily C82A unassigned peptidases MER0463656
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0377843 SCH4B_0945
CO C40 unassigned family C40 unassigned peptidases MER0453951
G- G5 unassigned family G5 unassigned peptidases MER0939946 SCH4B_2878
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0358059
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0335335 pepN SCH4B_4027
MA M3 unassigned subfamily M3A unassigned peptidases MER0343861
MA M3 unassigned family M3 unassigned peptidases MER0228479 SCH4B_2372
MA M10 unassigned subfamily M10B unassigned peptidases MER0291211 SCH4B_0220
MA M32 unassigned family M32 unassigned peptidases MER0295076 SCH4B_2310
MA M41 unassigned family M41 unassigned peptidases MER0362202 ftsH SCH4B_2525
MA M48 unassigned family M48 unassigned peptidases MER0886548 SCH4B_4240
MA M56 unassigned family M56 unassigned peptidases MER0935019 SCH4B_2594
MD M74 unassigned family M74 unassigned peptidases MER0313097 mepA SCH4B_2862
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0470900
ME M16 unassigned subfamily M16B unassigned peptidases MER0391235 SCH4B_3474
ME M16 unassigned subfamily M16B unassigned peptidases MER0315530 SCH4B_2489
MF M17 unassigned family M17 unassigned peptidases MER0340635 SCH4B_0946
MF M17 unassigned family M17 unassigned peptidases MER0340158 pepA SCH4B_4337
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0394097 map SCH4B_2632
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0396648 SCH4B_2925
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0483743
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0483744
MG M24 unassigned subfamily M24B unassigned peptidases MER0396507 SCH4B_2927
MG M24 unassigned subfamily M24B unassigned peptidases MER0482085
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0842111 SCH4B_2898
MH M20 non-peptidase homologue subfamily M20F non-peptidase homologues MER0853532 SCH4B_4235
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0800824 SCH4B_0501
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0843743 SCH4B_2321
MH M20 unassigned subfamily M20A unassigned peptidases MER0474894 dapE
MH M20 unassigned subfamily M20A unassigned peptidases MER0369446 SCH4B_3828
MH M20 unassigned subfamily M20A unassigned peptidases MER0302822
MH M20 unassigned subfamily M20B unassigned peptidases MER0370725 pepT SCH4B_3961
MH M20 unassigned family M20D unassigned peptidases MER0373104 SCH4B_2469
MH M20 unassigned family M20D unassigned peptidases MER0372343 SCH4B_3735
MH M20 unassigned family M20D unassigned peptidases MER0371733 SCH4B_4040
MH M20 unassigned family M20D unassigned peptidases MER0372114 SCH4B_4041
MH M20 unassigned family M20D unassigned peptidases MER0372013 SCH4B_4324
MH M20 unassigned family M20 unassigned peptidases MER0374018 SCH4B_2274
MH M20 unassigned family M20 unassigned peptidases MER0473153 argE_2
MJ M19 unassigned family M19 unassigned peptidases MER0290509 SCH4B_3408
MJ M19 unassigned family M19 unassigned peptidases MER0341506 SCH4B_2376
MJ M38 M38.982 urease MER0865628 ureC
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0864711 SCH4B_1839
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0874349 hutI
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0870627 SCH4B_4142
MM M50 unassigned family M50 unassigned peptidases MER0894305 rseP
MO M23 M23.009 Mername-AA292 peptidase MER0388101 SCH4B_2428
MO M23 M23.009 Mername-AA292 peptidase MER0388087 SCH4B_4557
MO M23 unassigned family M23 unassigned peptidases MER0479961
MS M75 M75.001 imelysin MER0220979 SCH4B_1473
MT M81 unassigned family M81 unassigned peptidases MER0223346 SCH4B_2971
MT M81 unassigned family M81 unassigned peptidases MER0223347 SCH4B_3730
MU M103 M103.UNW family M103 non-peptidase homologues MER0229578 SCH4B_2837
NB N6 unassigned family N6 unassigned peptide lyases MER0405903
PA S1 S01.260 B1598 peptidase MER0216360
PA S1 S01.260 B1598 peptidase MER0488589
PA S1 non-peptidase homologue subfamily S1B non-peptidase homologues MER0954837 SCH4B_1357
PA S1 unassigned subfamily S1C unassigned peptidases MER0408251
PA S1 unassigned subfamily S1C unassigned peptidases MER0210519 SCH4B_1071
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0456158 purF
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0459337
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0456159 glmS
PB S45 S45.003 cephalosporin C acylase precursor MER0312234 SCH4B_2289
PB T1 T01.006 HslV component of HslUV peptidase MER0238777 hslV SCH4B_3172
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0378952 ggt SCH4B_1326
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0379401 SCH4B_3440
PB T3 unassigned family T3 unassigned peptidases MER0379927 SCH4B_0502
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0436258
PC C26 C26.957 GMP synthase MER0443719
PC C26 C26.964 CTP synthetase MER0449345 pyrG
PC C26 unassigned family C26 unassigned peptidases MER0447540
PC C26 unassigned family C26 unassigned peptidases MER0440972 carA
PC C26 unassigned family C26 unassigned peptidases MER0444488 hisH
PC C26 unassigned family C26 unassigned peptidases MER0449293
PC C26 unassigned family C26 unassigned peptidases MER0450776
PE P1 P01.001 DmpA aminopeptidase MER0316833 SCH4B_2828
PE T5 T05.001 ornithine acetyltransferase precursor MER0380544 argJ SCH4B_3239
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER1284649
SB S8 unassigned subfamily S8A unassigned peptidases MER0969761 SCH4B_0750
SB S8 unassigned subfamily S8A unassigned peptidases MER0279194 SCH4B_3792
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER0997434 SCH4B_4197
SC S9 unassigned subfamily S9B unassigned peptidases MER0996751 fghA
SC S9 unassigned family S9 unassigned peptidases MER0477963 SCH4B_4710
SC S9 unassigned family S9 unassigned peptidases MER0213086
SC S15 unassigned family S15 unassigned peptidases MER0490388
SC S33 S33.001 prolyl aminopeptidase MER0307848 pip SCH4B_3232
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0209716
SC S33 unassigned family S33 unassigned peptidases MER0214370 SCH4B_0567
SC S33 unassigned family S33 unassigned peptidases MER0210820
SC S33 unassigned family S33 unassigned peptidases MER0209064
SC S33 unassigned family S33 unassigned peptidases MER0208730
SE S11 unassigned family S11 unassigned peptidases MER0351493 SCH4B_0494
SE S11 unassigned family S11 unassigned peptidases MER0351534 SCH4B_2711
SE S12 unassigned family S12 unassigned peptidases MER0355107 SCH4B_1922
SE S13 unassigned family S13 unassigned peptidases MER0279848 dacB SCH4B_1409
SF S24 S24.001 repressor LexA MER0375861 lexA SCH4B_4607
SF S24 unassigned family S24 unassigned peptidases MER1045439 SCH4B_1728
SF S26 S26.001 signal peptidase I MER0333298 lepB SCH4B_2736
SH S78 unassigned family S78 unassigned peptidases MER1085860 SCH4B_3116
SH S78 unassigned family S78 unassigned peptidases MER0276470 SCH4B_4529
SJ S16 S16.001 Lon-A peptidase MER0360381 lon SCH4B_4097
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0475475
SK S14 S14.001 peptidase Clp (type 1) MER0358071 clpP SCH4B_2109
SK S41 unassigned subfamily S41A unassigned peptidases MER0237698 SCH4B_2975
SK S49 unassigned subfamily S49B unassigned peptidases MER1070173 SCH4B_2695
ST S54 non-peptidase homologue family S54 non-peptidase homologues MER1078207 SCH4B_1289
ST S54 unassigned family S54 unassigned peptidases MER1082887 SCH4B_3835

GENOME ANALYSIS: Comparison with 100 completely sequenced genomes from family Rhodobacteraceae
Family Comment
C1 significant presence (1 homologues)
G4 significant presence (1 homologues)